{"expected":{"aligned_a":"GA-CCCCCTACTTTTTTTTTTTTTTGCCTGGCTGG","aligned_b":"GACCCCCCTACTCCTTTTTTTTTTTGCCTGGCTGA","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"6a268394e00493f3a09df09b94f6ab67ab28b85152e777d1c27a3c315ec04f34","group_id":"123be6c5bf45e3517c6c3a5a7e7037f2b5cb865d601eb141ce26317f91c356ec","id":"ALIGN-0000005","index":5,"input":{"a":"GACCCCCTACTTTTTTTTTTTTTTGCCTGGCTGG","b":"GACCCCCCTACTCCTTTTTTTTTTTGCCTGGCTGA","source_sequence":"GACCCCCTACTTTTTTTTTTTTTTGCCTGGCTGG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGGTGCCCTGGGGGGGGGGGGGGGAAGCGCCTCG","aligned_b":"AGGGTGCCTTGGGGGGGGGGGGGGGAAGCGCCTCG","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"e79db0eb9f54cb08438a94d97d893f6b1b0d20b9b0f0724f04b49d6254592146","group_id":"e2df9a013a6fa677f1fdfef4b956505e809c07ec2e6ca3ebf87017eac3f513b0","id":"ALIGN-0000020","index":20,"input":{"a":"AGGGTGCCCTGGGGGGGGGGGGGGGAAGCGCCTCG","b":"AGGGTGCCTTGGGGGGGGGGGGGGGAAGCGCCTCG","source_sequence":"AGGGTGCCCTGGGGGGGGGGGGGGGAAGCGCCTCG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAGCGTTGTTAATAATAATAATATAAATAA","aligned_b":"AAGCGTTG-TAATAATAA-AATATAAAT-A","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"5897c980202fc47bcba5dd47af23afa3fc7906c5c966c3e013c1d9e94a82c3ac","group_id":"aa4eb127814213862e29da1167e16ee592a6fdc6d73127a76ef6fdd5a018a552","id":"ALIGN-0000021","index":21,"input":{"a":"AAGCGTTGTTAATAATAATAATATAAATAA","b":"AAGCGTTGTAATAATAAAATATAAATA","source_sequence":"AAGCGTTGTTAATAATAATAATATAAATAA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTTATACGCGCTCTAAGCCTGGGTT-GA-CGTGT-T----","aligned_b":"----A-ACACG-TC-AACCCAGGCTTAGAGCGCGTATAAAC","edit_distance":19,"within_threshold":true},"family":"reverse_complement","fingerprint":"4652e3e9bbb12d5dde373006dca6e3db41bde0c944b963f5745ceaf5856fd55b","group_id":"8c7eba936187390294d808d1342af3a92421000160c8300802a9ca9cc096da3c","id":"ALIGN-0000034","index":34,"input":{"a":"GTTTATACGCGCTCTAAGCCTGGGTTGACGTGTT","b":"AACACGTCAACCCAGGCTTAGAGCGCGTATAAAC","source_sequence":"GTTTATACGCGCTCTAAGCCTGGGTTGACGTGTT","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAATTACTATC--TTCTTCTTCTTCTTCTGTGCAAGGA","aligned_b":"AAATTACTATCGGGTCTTCTTCTTCTTCTGTGCAAGGA","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"3f3de26d97cd5f36823abacccc96243fb50c6b0fca7ad7b9779c9f4eb418086d","group_id":"d6126cefd1e476559cd82e4918ba228e6c108bd46e781806cd6820adb095da89","id":"ALIGN-0000046","index":46,"input":{"a":"AAATTACTATCTTCTTCTTCTTCTTCTGTGCAAGGA","b":"AAATTACTATCGGGTCTTCTTCTTCTTCTGTGCAAGGA","source_sequence":"AAATTACTATCTTCTTCTTCTTCTTCTGTGCAAGGA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TTTGA-CGCGTGAGCTTTGACCCCATTAGTG","aligned_b":"CACTAATGGGGTCAAAGCTCA-CGCGTCA-AA","edit_distance":20,"within_threshold":true},"family":"reverse_complement","fingerprint":"7ea0877cdb0c680f7415e0a974ea9d19fc92966984dddbcb7ec272839599a68e","group_id":"325b62e19456a12c4ab224ec7766c4f2e20a5477eebcd54d5c7eaa0839fda1ee","id":"ALIGN-0000049","index":49,"input":{"a":"TTTGACGCGTGAGCTTTGACCCCATTAGTG","b":"CACTAATGGGGTCAAAGCTCACGCGTCAAA","source_sequence":"TTTGACGCGTGAGCTTTGACCCCATTAGTG","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCTACCAGTGAATGTGCTCACAAGCAATCCACGCCGACAAATC","aligned_b":"CTCTACCAGTGAATGGGCTCACAAGCAATCCACGCCGACAAATC","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"3f313ac44fc2a6f8e4c843604e44273b1b8544e1736876ab09d35b74e245852c","group_id":"ad039b67a950bf9cacac0a0641707ff14bf5b4d93d10db850756071d8201515d","id":"ALIGN-0000062","index":62,"input":{"a":"CTCTACCAGTGAATGTGCTCACAAGCAATCCACGCCGACAAATC","b":"CTCTACCAGTGAATGGGCTCACAAGCAATCCACGCCGACAAATC","source_sequence":"CTCTACCAGTGAATGTGCTCACAAGCAATCCACGCCGACAAATC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATTAGAGGCACTGACAAGTGCTACCGTT-TGCGGCCCGGGGTGC","aligned_b":"GATTAGAGGCACTGACAAGTGCTACCGTTATGCGGCCCGGGGTGC","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"aa3b2253691f2a8e9fdfb060148fef082bea0210716f5a1d61310e3e167e2df9","group_id":"0b01ae35a70713c0e57f07a20377f262e86c09d7b4a0e39431a8149a32ab8b15","id":"ALIGN-0000072","index":72,"input":{"a":"GATTAGAGGCACTGACAAGTGCTACCGTTTGCGGCCCGGGGTGC","b":"GATTAGAGGCACTGACAAGTGCTACCGTTATGCGGCCCGGGGTGC","source_sequence":"GATTAGAGGCACTGACAAGTGCTACCGTTTGCGGCCCGGGGTGC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTAGAAGCAACCCTACGGAGCAAGCCAAAGGGAAGGCAGGAGGC","aligned_b":"GGTAGAAGC-ACCCTACGGAGCAAGCCAAAGGGAAGGCACGGGGC","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"9e2a6c2a162de81550ff4d9c81349706fd11aebf14f41f0c8959a9092b8017a4","group_id":"ff65bc872dc095c7c51657f5027765e2e3e86c3a9c7da18d93b2b9fe1c768a79","id":"ALIGN-0000087","index":87,"input":{"a":"GGTAGAAGCAACCCTACGGAGCAAGCCAAAGGGAAGGCAGGAGGC","b":"GGTAGAAGCACCCTACGGAGCAAGCCAAAGGGAAGGCACGGGGC","source_sequence":"GGTAGAAGCAACCCTACGGAGCAAGCCAAAGGGAAGGCAGGAGGC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TCGGCCTCCTTTTTTTTTTTTTTTTTGCGCATCCGA","aligned_b":"GTCGGCCT-C-TTTTTTTTTTTTTTTTGCGCCTCCGA","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"3bde93ac759d649a5926d66e96cd1d1de3bc3f3110bc70a38a0121cc46e7ecac","group_id":"5c0f8077e2db9efcf4d7dd417fb47662d44e64a96f78ae548b97031cb99c9386","id":"ALIGN-0000110","index":110,"input":{"a":"TCGGCCTCCTTTTTTTTTTTTTTTTTGCGCATCCGA","b":"GTCGGCCTCTTTTTTTTTTTTTTTTGCGCCTCCGA","source_sequence":"TCGGCCTCCTTTTTTTTTTTTTTTTTGCGCATCCGA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CCTCG-GGCCCCCCCCCCCCCCCCCTTCTTTTTAT","aligned_b":"CCTCGCGGCCCCCCCCCCCCCGCCCTTCTTTTTAT","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"98723de11d8383bdd1ef7c2d50f1aa82a49ebd6d3e9f9e61d61be98b0b5c40d1","group_id":"fd48f3e775b0c0aff3e1c02c6adec50a864c2cf952b83c3b88c6124870f800a8","id":"ALIGN-0000155","index":155,"input":{"a":"CCTCGGGCCCCCCCCCCCCCCCCCTTCTTTTTAT","b":"CCTCGCGGCCCCCCCCCCCCCGCCCTTCTTTTTAT","source_sequence":"CCTCGGGCCCCCCCCCCCCCCCCCTTCTTTTTAT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CGACACCAAGCAGCAGCAGCAGCAGCATTCCTTATG","aligned_b":"CGACACCAAACAGCAGCAGCAGCAGCATTCCTTATG","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"4b332852b2625b926ac7a147206334b46ab6ae6c0e26e9f77148e1287abeb25b","group_id":"48a7c193888f03765eab878a647148d79e7534be914d7cb5d55242c97c1f5aec","id":"ALIGN-0000221","index":221,"input":{"a":"CGACACCAAGCAGCAGCAGCAGCAGCATTCCTTATG","b":"CGACACCAAACAGCAGCAGCAGCAGCATTCCTTATG","source_sequence":"CGACACCAAGCAGCAGCAGCAGCAGCATTCCTTATG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--G-CAACTAGTCAACGGCGTGA-ATGTGGGGACCCGCAG-C-GGGCCA","aligned_b":"TGGCCCGCT-G-C-GGGTCCCCACAT-TCACG--CCGTTGACTAGTTGC","edit_distance":30,"within_threshold":true},"family":"reverse_complement","fingerprint":"c30868002681e4e669301bb55d7faab9d20f93dea867310f961e0f2da07a7707","group_id":"6fb532bbb48ec577a729ae03ad38a73c7599adeda864da669c89c9d864dfe79e","id":"ALIGN-0000224","index":224,"input":{"a":"GCAACTAGTCAACGGCGTGAATGTGGGGACCCGCAGCGGGCCA","b":"TGGCCCGCTGCGGGTCCCCACATTCACGCCGTTGACTAGTTGC","source_sequence":"GCAACTAGTCAACGGCGTGAATGTGGGGACCCGCAGCGGGCCA","threshold":31},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCCA-CCAGACTACTACTACTACTACTACTCTCCCACCA","aligned_b":"TTCCAGCCAGACTACTACTACTACTACTACTCTTCCACCA","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"f119318f9a9cf7c22d4ae18060f19afd2ca991617cc8f9965084584bfaea88ae","group_id":"64e6630f62a27ad1537dfffc3a60a2e10f63eb622dc35e5e94b6ffd31bc1f722","id":"ALIGN-0000251","index":251,"input":{"a":"TTCCACCAGACTACTACTACTACTACTACTCTCCCACCA","b":"TTCCAGCCAGACTACTACTACTACTACTACTCTTCCACCA","source_sequence":"TTCCACCAGACTACTACTACTACTACTACTCTCCCACCA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAG-CGATC-GTAAAAA-AAAAAAACTATAGACCG","aligned_b":"GAGTCGATCAGTAAAAAGAAAAAAACTATAGA-CG","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"a7fcf95c4f37046cbdf8caf9d6d3f8cd7f488fa6d66ae3feb5a9557222a691f2","group_id":"595b7d81b628e44ba13d245d47d779bfd5d3207b20b2539910b0ac1ca8422b21","id":"ALIGN-0000260","index":260,"input":{"a":"GAGCGATCGTAAAAAAAAAAAACTATAGACCG","b":"GAGTCGATCAGTAAAAAGAAAAAAACTATAGACG","source_sequence":"GAGCGATCGTAAAAAAAAAAAACTATAGACCG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"C-TGTAGACGTA-AAAAAAAAAATCCCGATTGA","aligned_b":"CTTGTAGACGTAGAAAAAAAATATCCCGATTGA","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"fa71fcbda6a6df852a3029d2b7bd28cfc1d071ae2db1eed69ec4cd16114a95b5","group_id":"8c9fcda5a37c8179e0549414ea400e3312dd43182e5908c96663681c8f6c6af5","id":"ALIGN-0000270","index":270,"input":{"a":"CTGTAGACGTAAAAAAAAAAATCCCGATTGA","b":"CTTGTAGACGTAGAAAAAAAATATCCCGATTGA","source_sequence":"CTGTAGACGTAAAAAAAAAAATCCCGATTGA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTACATAGGNNG-TTAA--GAAGACCAATA","aligned_b":"AGTAC-TAGGNNGTTTAACTGAATACCAATA","edit_distance":5,"within_threshold":false},"family":"literal_N","fingerprint":"7d1e2acbb59907a2c57055ed844600b2cb327cb13e9cc961350843f0cfc30a97","group_id":"7823de7540353a4b1c0034196f46bfcf524b76408594aec6afad3a4877e75f4f","id":"ALIGN-0000278","index":278,"input":{"a":"AGTACATAGGNNGTTAAGAAGACCAATA","b":"AGTACTAGGNNGTTTAACTGAATACCAATA","source_sequence":"AGTACATAGGNNGTTAAGAAGACCAATA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTGTATGCAGAAGGAACAGACGTGAACCCG-C-G-TCC-TCT---T-TGC-","aligned_b":"---GCA--AAG-AGG-AC-G-CGGGTTCACGTCTGTTCCTTCTGCATACACA","edit_distance":26,"within_threshold":true},"family":"reverse_complement","fingerprint":"a992d083d541df1ab16aa0b19dc69c8a514636b8058e169b6c6c4cfc415e03f4","group_id":"56a568955bc4b9772b614702a0c0dad6e0f1359cc049a3d7cac7e89d1cba09f5","id":"ALIGN-0000279","index":279,"input":{"a":"TGTGTATGCAGAAGGAACAGACGTGAACCCGCGTCCTCTTTGC","b":"GCAAAGAGGACGCGGGTTCACGTCTGTTCCTTCTGCATACACA","source_sequence":"TGTGTATGCAGAAGGAACAGACGTGAACCCGCGTCCTCTTTGC","threshold":26},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GC-TTCTTAG-CNNCG-GGAGAACTACTGCACGCGT","aligned_b":"GCATTCTTAGCCNNCGAGGAGAACTACTGCA-GCGT","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"7389321c6e0345c67966e5e849b4cac5b7c2c2483a8b8a18db82a5acb06cf0e0","group_id":"66c647ad8f9f991b07b79922255ee42118836dc6eae3b927359dcbf95af68681","id":"ALIGN-0000283","index":283,"input":{"a":"GCTTCTTAGCNNCGGGAGAACTACTGCACGCGT","b":"GCATTCTTAGCCNNCGAGGAGAACTACTGCAGCGT","source_sequence":"GCTTCTTAGCNNCGGGAGAACTACTGCACGCGT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GGTCAGTCTACC-AAGGCTCCGGGAGTGTAATAA","aligned_b":"TTATTACACTCCCGGAGCCT-TGGTAGACTGA-CC","edit_distance":19,"within_threshold":false},"family":"reverse_complement","fingerprint":"f6e34c22ff7e72f9daa4ff6e0124cf34fc85e330cf46fe3215bf49b0359297c9","group_id":"3c6e80a1ac7aeccedccdbda4a9745a505f98c358738a2c22798c6ad55fcde9c0","id":"ALIGN-0000294","index":294,"input":{"a":"GGTCAGTCTACCAAGGCTCCGGGAGTGTAATAA","b":"TTATTACACTCCCGGAGCCTTGGTAGACTGACC","source_sequence":"GGTCAGTCTACCAAGGCTCCGGGAGTGTAATAA","threshold":18},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"AAGTTACTTCCTCCGACCGGAAATG-ACACCGCCGCACTCTAC","aligned_b":"AAGTTACTTCCTCC-ACCGGAAATGTACACC-CCGCACTCTAC","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"119610fd563b962ea0771b6998f504a010a70df7d5d044b79638bfc58f800df6","group_id":"f6cceb135c246d076c36e0f50272d7b462ac6061b83dc098ef6167cf1c483a69","id":"ALIGN-0000362","index":362,"input":{"a":"AAGTTACTTCCTCCGACCGGAAATGACACCGCCGCACTCTAC","b":"AAGTTACTTCCTCCACCGGAAATGTACACCCCGCACTCTAC","source_sequence":"AAGTTACTTCCTCCGACCGGAAATGACACCGCCGCACTCTAC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-ATT-GGAAAGCNNGGAGCCATAGGCAT","aligned_b":"CATTGGGAAAGCNGGGAGCCATAGGCAT","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"ad8740ebba71df8909fe83e799798d69ba1cb172e519e3cb360e1adf64d79ce3","group_id":"7b4efdff206fd1cea82658885a345bad55d30a01206edc28ba190fdb4c9ac330","id":"ALIGN-0000373","index":373,"input":{"a":"ATTGGAAAGCNNGGAGCCATAGGCAT","b":"CATTGGGAAAGCNGGGAGCCATAGGCAT","source_sequence":"ATTGGAAAGCNNGGAGCCATAGGCAT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAGTATGAGGNNTATCTAACATGCTCGGGCGTCTTCGT","aligned_b":"TAGTTTGAGGNNTATCT-ACATGCTCGGGCGTCTTCGT","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"0b0f481f5d3361c96e2a470352bf6def93c7431ff3a28b618f9f6862d1e96811","group_id":"6c5f1cc122459235854e59f1f34f9f4c40eb3103664d20f6313875463ca2ea73","id":"ALIGN-0000388","index":388,"input":{"a":"TAGTATGAGGNNTATCTAACATGCTCGGGCGTCTTCGT","b":"TAGTTTGAGGNNTATCTACATGCTCGGGCGTCTTCGT","source_sequence":"TAGTATGAGGNNTATCTAACATGCTCGGGCGTCTTCGT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CGGGCAGACCAGTCGGG-GGGATTTTAACTTTCGCTAATGACAGTCTCC","aligned_b":"CGGGCATACCAGTCGGGCGGGA-TTTAACTTTCGCTAATGACAGTCTCC","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"b776a757923b00e6c30393290e74821e082ea59a43dfcb3c5b1c01d928144213","group_id":"5228f3275018da879997176b61032aaccfc7063cea6759f080ccf23036c47292","id":"ALIGN-0000447","index":447,"input":{"a":"CGGGCAGACCAGTCGGGGGGATTTTAACTTTCGCTAATGACAGTCTCC","b":"CGGGCATACCAGTCGGGCGGGATTTAACTTTCGCTAATGACAGTCTCC","source_sequence":"CGGGCAGACCAGTCGGGGGGATTTTAACTTTCGCTAATGACAGTCTCC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACTGATCTC-AAAAAAAAAAAAAA-AGAAGCAGG-AG","aligned_b":"TACAGATCTCAAAAAAAAAAAAAAACAGAAGCAGGTAG","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"59741429cdae71c1385d1bfa6b849f0b9c3c49f333e7bebcd45b2f0846756441","group_id":"5e41e5b57d2348470eeed2d49d5942ad341b399c62e2ef7b6abe1677878c9681","id":"ALIGN-0000450","index":450,"input":{"a":"TACTGATCTCAAAAAAAAAAAAAAAGAAGCAGGAG","b":"TACAGATCTCAAAAAAAAAAAAAAACAGAAGCAGGTAG","source_sequence":"TACTGATCTCAAAAAAAAAAAAAAAGAAGCAGGAG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGAGAGTCTGTTTTCCCGAGTTAGC-G-TTCCGCG","aligned_b":"CGCGGA-AC-GCTAACTCGGGAAAACAGACTCTCCT","edit_distance":20,"within_threshold":true},"family":"reverse_complement","fingerprint":"099fd7b9233e3d2da3819b40797628e67ad8e1e10733183005cf662b27bd330c","group_id":"7b4345f59d42b941e41c6ab59eb940d7ea59ca74ba9f2af8bc9b98c75ce88625","id":"ALIGN-0000469","index":469,"input":{"a":"AGGAGAGTCTGTTTTCCCGAGTTAGCGTTCCGCG","b":"CGCGGAACGCTAACTCGGGAAAACAGACTCTCCT","source_sequence":"AGGAGAGTCTGTTTTCCCGAGTTAGCGTTCCGCG","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTGTTCTTTGCCG-CTCGCTATATGTCGACCATTGAGT","aligned_b":"TTGTTCTTTGCCGCCTCGCTATATGTCGACCATTGAGT","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"573a59577963c2b4e28263a33300d26aee522e478c5ec541f25b173ba8079651","group_id":"3c8344c383bdd65b70aaabb687d4b473984e1b5b852292141607264c4b94b9cb","id":"ALIGN-0000472","index":472,"input":{"a":"TTGTTCTTTGCCGCTCGCTATATGTCGACCATTGAGT","b":"TTGTTCTTTGCCGCCTCGCTATATGTCGACCATTGAGT","source_sequence":"TTGTTCTTTGCCGCTCGCTATATGTCGACCATTGAGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCCTGACTTCNNGTACTCCGTCG-CTATTGACTT","aligned_b":"CCCNGACTTCNNGTNGTCCGTCGTCTATTGACTT","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"a25b44d41b865fdf633265bb14bdbf0c2d6cac5d37768653687f280de59abb2c","group_id":"f6821e212e55b7ffc387e6d08b3b610a475859bbbba7cb923503828a09f2b15e","id":"ALIGN-0000478","index":478,"input":{"a":"CCCTGACTTCNNGTACTCCGTCGCTATTGACTT","b":"CCCNGACTTCNNGTNGTCCGTCGTCTATTGACTT","source_sequence":"CCCTGACTTCNNGTACTCCGTCGCTATTGACTT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACTCTGAAAATCTCTATAG-TATGTAAAGTACT","aligned_b":"AGTACTTTACAT-ACTATAGAGATTTTCAGAGTT","edit_distance":16,"within_threshold":true},"family":"reverse_complement","fingerprint":"ac9a4a16229602c5c65059ef99010e09c2aa56b3af8aa058076c8cf7824ce55f","group_id":"994d17973d31c642d8569bc1516a1861d9ddd4cb07ed6fe9d3d6c663c1eb3b4a","id":"ALIGN-0000479","index":479,"input":{"a":"AACTCTGAAAATCTCTATAGTATGTAAAGTACT","b":"AGTACTTTACATACTATAGAGATTTTCAGAGTT","source_sequence":"AACTCTGAAAATCTCTATAGTATGTAAAGTACT","threshold":16},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCTCACCTTCCGGATGAGCAACAGGTAGAGCGGGATTCAAGTGA","aligned_b":"ATCTCACCTTCCGGATGAGCAACAGGTAGAGCGGGATTCAAGTGA","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"2902196376f535fdd497ca0317d770c85bd6637e1910c1bab67a5c6f589adbf6","group_id":"60c7a7074276a202a103e845137952017bc214291a6bdc011c590c7e0b8991fd","id":"ALIGN-0000487","index":487,"input":{"a":"CTCTCACCTTCCGGATGAGCAACAGGTAGAGCGGGATTCAAGTGA","b":"ATCTCACCTTCCGGATGAGCAACAGGTAGAGCGGGATTCAAGTGA","source_sequence":"CTCTCACCTTCCGGATGAGCAACAGGTAGAGCGGGATTCAAGTGA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAGGGCCATACAACGCAATG-A-GTCGC--","aligned_b":"--GCGAC-T-CATTGCGTTGTATGGCCCTA","edit_distance":16,"within_threshold":true},"family":"reverse_complement","fingerprint":"789298817c72d2d64ff07f056837f12afef07f26f319fc1619db20c207ae830a","group_id":"64209995dfcde5859b6aeb5d22f24081b788b21c247d4f4b53ec9450e74f53cc","id":"ALIGN-0000489","index":489,"input":{"a":"TAGGGCCATACAACGCAATGAGTCGC","b":"GCGACTCATTGCGTTGTATGGCCCTA","source_sequence":"TAGGGCCATACAACGCAATGAGTCGC","threshold":17},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATAGT-T-CGTCGGACGTATAC-ATG","aligned_b":"CAT-GTATACGTCCGACG-A-ACTATC","edit_distance":9,"within_threshold":true},"family":"reverse_complement","fingerprint":"02e40147243724ca99fa570cc50f59a3ecfd9226ae9f8a35558e748f34cbb552","group_id":"716adb7906d82b451449749056c5cd830ed6541bfe9351270ff5cc605c8b5bb3","id":"ALIGN-0000494","index":494,"input":{"a":"GATAGTTCGTCGGACGTATACATG","b":"CATGTATACGTCCGACGAACTATC","source_sequence":"GATAGTTCGTCGGACGTATACATG","threshold":10},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"---GAGGT-GGACAAACGTGTCAGACGTGTGA","aligned_b":"TCACACGTCTGACACGTTTGTC-CAC--CT-C","edit_distance":18,"within_threshold":true},"family":"reverse_complement","fingerprint":"f4b8dbe5cd9a11b79dcc53f642f1416916146afbec8530116cf4389b4061501d","group_id":"e788b41b48dd053d7f09620db70c4233444fe78d4acc631a7f7bf8366c28e086","id":"ALIGN-0000519","index":519,"input":{"a":"GAGGTGGACAAACGTGTCAGACGTGTGA","b":"TCACACGTCTGACACGTTTGTCCACCTC","source_sequence":"GAGGTGGACAAACGTGTCAGACGTGTGA","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-CCGATCCA-CANNACCTTATTTTGA-GAAGCGGT","aligned_b":"CCCGATCCACCANNACCTTATATTGAGGAAGCGGT","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"92d8a0fd1830ad4158c1e4284ff93c04dd406b88bd9c720548e33a88fc33daa6","group_id":"0bf8d75fe823f181d159b22a1cc1b1682854b288a2b0cbd5d0c0c4f4410dce8d","id":"ALIGN-0000528","index":528,"input":{"a":"CCGATCCACANNACCTTATTTTGAGAAGCGGT","b":"CCCGATCCACCANNACCTTATATTGAGGAAGCGGT","source_sequence":"CCGATCCACANNACCTTATTTTGAGAAGCGGT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATATTCAGCTCCAACCACTTGGTAC-G-TTCTA","aligned_b":"TAGA-AC-GTACCAAGTGGTTGGAGCTGAATATG","edit_distance":18,"within_threshold":false},"family":"reverse_complement","fingerprint":"cdc7d030db308cf8cfdb831cd8be7749081de7fb107540eff57bcacb3f708dfb","group_id":"441d9deb59605199927ab27823216d276a7454ccc3619437d267ea5e82159293","id":"ALIGN-0000529","index":529,"input":{"a":"CATATTCAGCTCCAACCACTTGGTACGTTCTA","b":"TAGAACGTACCAAGTGGTTGGAGCTGAATATG","source_sequence":"CATATTCAGCTCCAACCACTTGGTACGTTCTA","threshold":17},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGAGGTTAGCGAGTTATGTTACAGGGCAT","aligned_b":"AGAGGTTAGCGAGTTATGTTTCA-GGCTT","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"f105f2c9e46a52cb69799e89d5e811182c16b7bb7f228ee7d5a1e2c59261a36a","group_id":"008ecaaf5c9bf02ac46dafa04dfaa35f77e57c380a9da1a17a0cefeda05125ad","id":"ALIGN-0000537","index":537,"input":{"a":"AGAGGTTAGCGAGTTATGTTACAGGGCAT","b":"AGAGGTTAGCGAGTTATGTTTCAGGCTT","source_sequence":"AGAGGTTAGCGAGTTATGTTACAGGGCAT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATAGACCGGGACGTAGAAAAAAGGAACATAACTCTCTGATTAGC","aligned_b":"ATAGACCGGGACG-AGAACAAAGGAACATAACTCTCTGATTAGC","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"bee8da3b6d9c3de8cf8ce335c17d40df1446c5a923fd26a7cb53e092aab05e47","group_id":"bd3109a7b7c32033ff2c8e11f8e0076e46b5e89a1250c69fdab91619ba771821","id":"ALIGN-0000542","index":542,"input":{"a":"ATAGACCGGGACGTAGAAAAAAGGAACATAACTCTCTGATTAGC","b":"ATAGACCGGGACGAGAACAAAGGAACATAACTCTCTGATTAGC","source_sequence":"ATAGACCGGGACGTAGAAAAAAGGAACATAACTCTCTGATTAGC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"----GGC-CGGAGCACGCAAACACTTGGAG-GCGCGGAGCCTCGT","aligned_b":"ACGAGGCTCCGCGC-CTCCAAGTGTTTGCGTGCTCCG-G-C-C--","edit_distance":23,"within_threshold":true},"family":"reverse_complement","fingerprint":"57245891acf556538885e27f39a6c6736c63ac2398be6037f91a437aeaad8c67","group_id":"1e17316123ed3f02e4f96c56477458bb446ff176dea23d925679e481c9a57e2a","id":"ALIGN-0000579","index":579,"input":{"a":"GGCCGGAGCACGCAAACACTTGGAGGCGCGGAGCCTCGT","b":"ACGAGGCTCCGCGCCTCCAAGTGTTTGCGTGCTCCGGCC","source_sequence":"GGCCGGAGCACGCAAACACTTGGAGGCGCGGAGCCTCGT","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"---TCAGTCGTTGCTGGCTG-TTCGTCTAAACC","aligned_b":"GGTTTAGACG-AACAGCCAGCAACGACT-GA--","edit_distance":19,"within_threshold":true},"family":"reverse_complement","fingerprint":"4574faba3355f22e137fe3ef218c50cd5d9e2815cc1751a5ec92726fb1380100","group_id":"9adff5077ad3113a712e0f46e81186c64ffd65a99d968e5c52f7dc4dfef4741e","id":"ALIGN-0000599","index":599,"input":{"a":"TCAGTCGTTGCTGGCTGTTCGTCTAAACC","b":"GGTTTAGACGAACAGCCAGCAACGACTGA","source_sequence":"TCAGTCGTTGCTGGCTGTTCGTCTAAACC","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--GCAT-TA-GCGGTTCTTTACCCTCCAATCATTCTCCTTGACACAA","aligned_b":"TTGTGTCAAGGAGAATGATTGGAGGGTAAAGA-AC-CGCT-A-ATGC","edit_distance":31,"within_threshold":false},"family":"reverse_complement","fingerprint":"63a06f5e792a7dc1c7373d2be66e8a005d8b69300e06900688b559514163b265","group_id":"25640c2369916bf9469b2f918e50ebb7f3409c131c5e88791ccb41859809acb2","id":"ALIGN-0000604","index":604,"input":{"a":"GCATTAGCGGTTCTTTACCCTCCAATCATTCTCCTTGACACAA","b":"TTGTGTCAAGGAGAATGATTGGAGGGTAAAGAACCGCTAATGC","source_sequence":"GCATTAGCGGTTCTTTACCCTCCAATCATTCTCCTTGACACAA","threshold":30},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTGTCTCCANNATGGACGAGCCCT","aligned_b":"AGTGTCTGCANNAT-GACGA-TACT","edit_distance":5,"within_threshold":false},"family":"literal_N","fingerprint":"28e815690c13037f457a4b28422f2f84d08670d2f1275a283b06475afed4d59c","group_id":"9891da4f7afc83e4868dde0faa9b64031fde70794d8e40fd943cc3c8d9eeb93e","id":"ALIGN-0000613","index":613,"input":{"a":"AGTGTCTCCANNATGGACGAGCCCT","b":"AGTGTCTGCANNATGACGATACT","source_sequence":"AGTGTCTCCANNATGGACGAGCCCT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AATTCCGTAGTTGTAACGATCAATTC","aligned_b":"AATTCCGAAGTTGTAACGATCAATTC","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"40ff763bf409375d3666ac51571979b55bb9f2f43dbbd07617d347d4928ee944","group_id":"ca2bc9ad60f96bf137d052f1d4f35eba61b7d850f654ec17b94bdc6d1fa2c4b4","id":"ALIGN-0000622","index":622,"input":{"a":"AATTCCGTAGTTGTAACGATCAATTC","b":"AATTCCGAAGTTGTAACGATCAATTC","source_sequence":"AATTCCGTAGTTGTAACGATCAATTC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATATCGTCCAAAACTACGATTATTG-AGTGCCGGTC-AGGCT","aligned_b":"-AGCCTGACCGGCACT-CAATAATCGTAGTTTTGGACGATATC","edit_distance":23,"within_threshold":true},"family":"reverse_complement","fingerprint":"877c789bcd568594a97834350dfe99794349ab4e0f360fdba87cbb7575ee96e7","group_id":"1f68fb2186150392ecd3c1384d605bdeb1bcead3ed8b6dd7bf45309c9362a947","id":"ALIGN-0000624","index":624,"input":{"a":"GATATCGTCCAAAACTACGATTATTGAGTGCCGGTCAGGCT","b":"AGCCTGACCGGCACTCAATAATCGTAGTTTTGGACGATATC","source_sequence":"GATATCGTCCAAAACTACGATTATTGAGTGCCGGTCAGGCT","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGGCTTCCAATCATCATCATCATCCCTATTGAG","aligned_b":"GGGCTT-CAATCATCATCATCATCCCTATTG-G","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"114d37829098af2f0936f3170d9a477f1c420f3cb99f0b1592c7fd6649b8c60d","group_id":"394bd6218367571348b2183a5192ac1f0903b1dc953054bfc40f22cdf6d1c9f6","id":"ALIGN-0000646","index":646,"input":{"a":"GGGCTTCCAATCATCATCATCATCCCTATTGAG","b":"GGGCTTCAATCATCATCATCATCCCTATTGG","source_sequence":"GGGCTTCCAATCATCATCATCATCCCTATTGAG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTCAAGCGAGNNGCACGTTTCAGCAAATTTCGTGCCGGGGTAAA","aligned_b":"GTCAAGCGAGNNGCACGTTTCAGCAAATTTCGTGCC-GGGTAAA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"21a8d8758bc4cc2593236d33ea16291325e6462707ea75d55b2cfe4b3d926738","group_id":"92d95d9947d359b09c02704bad9f37dfabd385d0be73677a60b239151dd29f21","id":"ALIGN-0000658","index":658,"input":{"a":"GTCAAGCGAGNNGCACGTTTCAGCAAATTTCGTGCCGGGGTAAA","b":"GTCAAGCGAGNNGCACGTTTCAGCAAATTTCGTGCCGGGTAAA","source_sequence":"GTCAAGCGAGNNGCACGTTTCAGCAAATTTCGTGCCGGGGTAAA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCTAAGGGATNNATTTCC-TCGTCAAGGTGAACTGGGGTTT","aligned_b":"GCTAAGGGATNNATTTCCTTCGTCAAGGTGAACTGGGGTTT","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"752b58891ec49ded136bb4b6720d72b3fc64dbbd6c3ac2f3b6fcbd2e840b32f9","group_id":"e41a3a4d4d27ed865b3a8ebb56e4eb9318f6632923e6d2aa194f81df7e3fe977","id":"ALIGN-0000668","index":668,"input":{"a":"GCTAAGGGATNNATTTCCTCGTCAAGGTGAACTGGGGTTT","b":"GCTAAGGGATNNATTTCCTTCGTCAAGGTGAACTGGGGTTT","source_sequence":"GCTAAGGGATNNATTTCCTCGTCAAGGTGAACTGGGGTTT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCACCTGTAATTTTTTTTTTTTTTTCTACACCTT","aligned_b":"TCACCTG-AATTTTTTTTTTTTTTTCTACACCTT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"c9cf906abc9a051851db0d792ff351509edf2699307cb895bcbc7c4c0dc07075","group_id":"d8291d21837a505254c8ba1fc9118b63b88fd37441ac3f50f3e30d43cbc8a5c1","id":"ALIGN-0000670","index":670,"input":{"a":"TCACCTGTAATTTTTTTTTTTTTTTCTACACCTT","b":"TCACCTGAATTTTTTTTTTTTTTTCTACACCTT","source_sequence":"TCACCTGTAATTTTTTTTTTTTTTTCTACACCTT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGT-TGAG-CCTACGGACGAATCTGGATGCGTCAACCT","aligned_b":"TGTCTGAGTCCTACGGACGAATCTGG-TGCGTGAACCT","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"18f1f27d7ee29f838189bed579dfcbf740e20b31d1b902579cac03ad16c87578","group_id":"38c6b8a144a3a7e3a3fd3530100ae6b9e927e2533b09ef6a5d219d832ddde616","id":"ALIGN-0000682","index":682,"input":{"a":"TGTTGAGCCTACGGACGAATCTGGATGCGTCAACCT","b":"TGTCTGAGTCCTACGGACGAATCTGGTGCGTGAACCT","source_sequence":"TGTTGAGCCTACGGACGAATCTGGATGCGTCAACCT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--GTATCCTTCATCGAGCA-AGCATGGACGGGGTGCGCG-TGAATAGCCGA","aligned_b":"TCGGCT-ATTCA-CGCGCACCCCGTCCA-TGCTTGCTCGATGAA-GGATAC","edit_distance":26,"within_threshold":false},"family":"reverse_complement","fingerprint":"e8d8f60ab8c34ba5e02c991a172b89deac49356c1e547ca648848734ec0db8e7","group_id":"f8a403f96d578cc477fa3eaf5969e2b60d8515a1080e756001d0bd53a49d0d14","id":"ALIGN-0000689","index":689,"input":{"a":"GTATCCTTCATCGAGCAAGCATGGACGGGGTGCGCGTGAATAGCCGA","b":"TCGGCTATTCACGCGCACCCCGTCCATGCTTGCTCGATGAAGGATAC","source_sequence":"GTATCCTTCATCGAGCAAGCATGGACGGGGTGCGCGTGAATAGCCGA","threshold":25},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTCCCCCCGGGGG-GGGGGCCAATCTGCT","aligned_b":"GTTCCCCCCGGGGGAGGGGGCCAATCTGCT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"30400dd0c3e33544dc02b04fcf4abe67a2ae39c71d11344f196547adf841d81b","group_id":"46fc61419a3dc529ce5a6d765286dc8977e2a443790bfeb6740303328ff27392","id":"ALIGN-0000690","index":690,"input":{"a":"GTTCCCCCCGGGGGGGGGGCCAATCTGCT","b":"GTTCCCCCCGGGGGAGGGGGCCAATCTGCT","source_sequence":"GTTCCCCCCGGGGGGGGGGCCAATCTGCT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACATACGTGGAAAAAA-AAAAAAAAGCTTCTG-TTT","aligned_b":"AC-TACGTGGAAAAAATAAAAAAAAGGTTCTGATTT","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"240cec1197e66ae98416b80cee007dc431246eaeb142fae02e33d1029e1ce641","group_id":"3a520fc7e1e99efcfbaab96a0353a2ee741cb9c5eedb5dab433dc776bdaa6d18","id":"ALIGN-0000705","index":705,"input":{"a":"ACATACGTGGAAAAAAAAAAAAAAGCTTCTGTTT","b":"ACTACGTGGAAAAAATAAAAAAAAGGTTCTGATTT","source_sequence":"ACATACGTGGAAAAAAAAAAAAAAGCTTCTGTTT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATA-TACTTACGCGTG-CGCTATCACGCTGGAAAAATTTA","aligned_b":"ATAGTACTTACGCGCGTCGCTATCACGATGGAAAAATTTA","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"418a8d02af28c40ce80a119b7341342b9d6a0511319d96cf6e200c16046d42e4","group_id":"666b49078ee3175c9b9854477d2d155acbdbc17e35b14c50539b6c07c44b08b4","id":"ALIGN-0000707","index":707,"input":{"a":"ATATACTTACGCGTGCGCTATCACGCTGGAAAAATTTA","b":"ATAGTACTTACGCGCGTCGCTATCACGATGGAAAAATTTA","source_sequence":"ATATACTTACGCGTGCGCTATCACGCTGGAAAAATTTA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAGGTGTTGCGGGGGGGGGGGAACTACCA","aligned_b":"AA-GTGTTGC-GGGGGGGGGGAACTACCA","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"5db2205276f8553e26a81c94f3637691bccb9e79ba81a65cc01dde547b45f1ad","group_id":"433a111168dd1c713fba86047722d30d05bc2697ea1d796a3b31a955476ace87","id":"ALIGN-0000720","index":720,"input":{"a":"AAGGTGTTGCGGGGGGGGGGGAACTACCA","b":"AAGTGTTGCGGGGGGGGGGAACTACCA","source_sequence":"AAGGTGTTGCGGGGGGGGGGGAACTACCA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGAGGCCGCTNNAACTTGGAG-G-GATGG","aligned_b":"TCA-GCCGCTNNAAC-TGGAGTGCGATGG","edit_distance":5,"within_threshold":false},"family":"literal_N","fingerprint":"8f74ebcd0b51a46201f26102d19ac8116850cf390c1100c1a0b7b642e104d356","group_id":"045d957b0a6cc67cd61a1666c6850d1f883b376086b496a31c4bdffd5178bb60","id":"ALIGN-0000723","index":723,"input":{"a":"TGAGGCCGCTNNAACTTGGAGGGATGG","b":"TCAGCCGCTNNAACTGGAGTGCGATGG","source_sequence":"TGAGGCCGCTNNAACTTGGAGGGATGG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGGACCGTTNNTCGTTAAGT-TCGCGGTCGAGGACTCGCCACA","aligned_b":"ACGGACCGTTTNTCGTTAAGTATCGCGGTCGAGGACTCGCCACA","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"f65696389c10e8256a3f3de7e123cdb3ab97c21d5420bc359da918a1ab592f2d","group_id":"2c0d451766c9f206077689f30929eda88fd5cd8ad55b5c868d67e8ce1e24823d","id":"ALIGN-0000743","index":743,"input":{"a":"ACGGACCGTTNNTCGTTAAGTTCGCGGTCGAGGACTCGCCACA","b":"ACGGACCGTTTNTCGTTAAGTATCGCGGTCGAGGACTCGCCACA","source_sequence":"ACGGACCGTTNNTCGTTAAGTTCGCGGTCGAGGACTCGCCACA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGG-TATGATNNCAAC-CGCCCTGGAGCGCTGGCA","aligned_b":"GGGGTTATGATNNCAACACGCCCTGGAGCGCTGGCA","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"aed2e8e418400306c6c642b944db2dda312905982bedf60c4864792c344214ca","group_id":"fb54ccaf4cd4d0327b4b83bb8cdbd6aa84bdd022a995c9f6b9d32467c6b36f1a","id":"ALIGN-0000753","index":753,"input":{"a":"CGGGTATGATNNCAACCGCCCTGGAGCGCTGGCA","b":"GGGGTTATGATNNCAACACGCCCTGGAGCGCTGGCA","source_sequence":"CGGGTATGATNNCAACCGCCCTGGAGCGCTGGCA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AATTGTAGCGTTTTTTTTTTTTTTTAAGCACCTGA","aligned_b":"AATTGTAGCGTTTTTTTATTTTTTTAAGCACCGGA","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"9e4631c185a849fa174439952d76a12bc0d19daac0a480e7218b084d4cbe8846","group_id":"dbbb5f178cefaf7f669f491b375814c899c2e609c3081310a2c3d37342d24757","id":"ALIGN-0000785","index":785,"input":{"a":"AATTGTAGCGTTTTTTTTTTTTTTTAAGCACCTGA","b":"AATTGTAGCGTTTTTTTATTTTTTTAAGCACCGGA","source_sequence":"AATTGTAGCGTTTTTTTTTTTTTTTAAGCACCTGA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATAGGAGGGGTGGTGGTGGTGGTCAAACGCGT","aligned_b":"CATCGGAGGGGTGGTGGTGGTGGTCAAACGCGT","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"817867faf733867be6bd7ea929daa2e69028f1795eb196bcebc761ead5e7f0dc","group_id":"ed31c7ef0e0aafcf0ec8581c3b9733ce5fb7cc025ada0f37aec96884a9b0e450","id":"ALIGN-0000786","index":786,"input":{"a":"CATAGGAGGGGTGGTGGTGGTGGTCAAACGCGT","b":"CATCGGAGGGGTGGTGGTGGTGGTCAAACGCGT","source_sequence":"CATAGGAGGGGTGGTGGTGGTGGTCAAACGCGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAAACGTATGCCCCCCCCCCCCCTAAAGACCGG","aligned_b":"TAAACGTATG-CCCCCTCCCCCCTAAAGACCGG","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"c2a1c041ac2f1ca3de807acb9a2fc706be198165ec3f7cfce58c7052003b0392","group_id":"099fc9af0e8babda6b28cf53d098a015c8317790d7cde444d4ad6605b813f3ed","id":"ALIGN-0000805","index":805,"input":{"a":"TAAACGTATGCCCCCCCCCCCCCTAAAGACCGG","b":"TAAACGTATGCCCCCTCCCCCCTAAAGACCGG","source_sequence":"TAAACGTATGCCCCCCCCCCCCCTAAAGACCGG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TTTGTCGACCGGGGGGGGGGGGGTAGGATCCCT","aligned_b":"TTTGTCGACC--GGGGGGGGGGGTAGGATCCCT","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"50a450a60689d0a4ab2a7e526b9b1b1773c42a9f64216f3f9f3ce85c00718258","group_id":"e35d510db71826dc4f82d6516d77f0c4b62533a8003634db9b1b636d84311378","id":"ALIGN-0000820","index":820,"input":{"a":"TTTGTCGACCGGGGGGGGGGGGGTAGGATCCCT","b":"TTTGTCGACCGGGGGGGGGGGTAGGATCCCT","source_sequence":"TTTGTCGACCGGGGGGGGGGGGGTAGGATCCCT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TCGTTATGC-CT-TGATATCGTCAACCAGTGCGCAGAGCCTCCATA","aligned_b":"TATGGAGGCTCTGCGCACTGGTTGACGA-T-ATCAAGGCATAACGA","edit_distance":26,"within_threshold":true},"family":"reverse_complement","fingerprint":"98b46a2989db4bb3c21b74baa93629e03b00f1c23660be66f7bd31c233954568","group_id":"624f0ff73a608319aef960c689891be35b18acc3c8fc0c8ba8658405d032987d","id":"ALIGN-0000829","index":829,"input":{"a":"TCGTTATGCCTTGATATCGTCAACCAGTGCGCAGAGCCTCCATA","b":"TATGGAGGCTCTGCGCACTGGTTGACGATATCAAGGCATAACGA","source_sequence":"TCGTTATGCCTTGATATCGTCAACCAGTGCGCAGAGCCTCCATA","threshold":26},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTAACGATGCAAAAAAAAAAAAAAAACCACGACC","aligned_b":"CT-AC-ATGCAAAAAAAAAAAAAAAACCACGACC","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"1a425c4e0da699b2562ea4efdd734fa853d2e49237f513467faa2969a8ccd72a","group_id":"3b7c37f118de3a455b26cbe42e73d15ed334041d6344714b66508a61e8912410","id":"ALIGN-0000830","index":830,"input":{"a":"CTAACGATGCAAAAAAAAAAAAAAAACCACGACC","b":"CTACATGCAAAAAAAAAAAAAAAACCACGACC","source_sequence":"CTAACGATGCAAAAAAAAAAAAAAAACCACGACC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CCGGTCGGAGAATAGGAGAGTGTGCGCTCATTTT","aligned_b":"CCGGTCGGAGAAT-GGAGAG-GTGC-CTCA-TTT","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"07c9f4f3b3b3592a84d020d79b79fddaaaa19b335a95abb90883fc8fdde2a823","group_id":"86f5bab316a25a61f62bdaaceaacf613245a337322de0ed7bba92f71a04a8551","id":"ALIGN-0000892","index":892,"input":{"a":"CCGGTCGGAGAATAGGAGAGTGTGCGCTCATTTT","b":"CCGGTCGGAGAATGGAGAGGTGCCTCATTT","source_sequence":"CCGGTCGGAGAATAGGAGAGTGTGCGCTCATTTT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCTTATCATAAATCGCTCCA-CCTTTTG","aligned_b":"-CAAAAGGTGGAGCGATTTATGATAAGG","edit_distance":18,"within_threshold":true},"family":"reverse_complement","fingerprint":"ec936f37876e44cb43b18d9ed882710b0d1e3ba87b221e5a8643a61c70a79977","group_id":"b0186fe98e154d32a3c81537a4258550632c4f6050f527621148d0494cbb89e9","id":"ALIGN-0000899","index":899,"input":{"a":"CCTTATCATAAATCGCTCCACCTTTTG","b":"CAAAAGGTGGAGCGATTTATGATAAGG","source_sequence":"CCTTATCATAAATCGCTCCACCTTTTG","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGACAGCAACCCCCCCCCCTCGTACACCT","aligned_b":"AGG-CAG-AACCCCCCCCCCTCGTACACCT","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"4e508978d742c9d5f7d4493a5303db6b7b76a461abe2c1500d53ca1e8ba59633","group_id":"3382f689ce9653708e0b532541cd7255b3181527bd140e20b74604b5856c686c","id":"ALIGN-0000965","index":965,"input":{"a":"AGGACAGCAACCCCCCCCCCTCGTACACCT","b":"AGGCAGAACCCCCCCCCCTCGTACACCT","source_sequence":"AGGACAGCAACCCCCCCCCCTCGTACACCT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCG-ACGACAC-GTCAGACGATTAGGATCCGC-ACCTAGAGTGAAGACG","aligned_b":"CTCGAACGACACGGTTAGACG-TTAGGATCCGCTACCTAGAGTGAAGACG","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"061a2cf0d67fa4c9bfab3e1c1cca9cf0cea0dcdcb6604a01d7844acdb66a6e44","group_id":"3cf53065143c1946439547b503434c1318667fa3a4add6fae81505aadc1662e7","id":"ALIGN-0000972","index":972,"input":{"a":"CTCGACGACACGTCAGACGATTAGGATCCGCACCTAGAGTGAAGACG","b":"CTCGAACGACACGGTTAGACGTTAGGATCCGCTACCTAGAGTGAAGACG","source_sequence":"CTCGACGACACGTCAGACGATTAGGATCCGCACCTAGAGTGAAGACG","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGTCTAGTTCGCGCTTATTATAACGTCAGGGTAACTAGTTAATCAAA","aligned_b":"ACGTCTAGTTCGCGCTTATTATAACGTCAGGGTAACTAGTTAATCAAA","edit_distance":0,"within_threshold":true},"family":"clustered_indels","fingerprint":"088e0d63a548477868675530971a4827f02a92db9f4eadbb11b51afa952507c7","group_id":"6fc3ce4dd53d21d282726b92029c355082b6c431aeb307b61698576a5ed713a8","id":"ALIGN-0000987","index":987,"input":{"a":"ACGTCTAGTTCGCGCTTATTATAACGTCAGGGTAACTAGTTAATCAAA","b":"ACGTCTAGTTCGCGCTTATTATAACGTCAGGGTAACTAGTTAATCAAA","source_sequence":"ACGTCTAGTTCGCGCTTATTATAACGTCAGGGTAACTAGTTAATCAAA","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGCGTATACGCACC-CAGAGTGCCCTCA-GCTTTTTTGCGGAGCCACTATGC-","aligned_b":"-GCATAGTGGCTCCGCA-AAAAAGCTGAGGGCACTCTG-GGTGCGTATACGCA","edit_distance":27,"within_threshold":true},"family":"reverse_complement","fingerprint":"5531426d3f2cc283fdba6ec56a4d2c1de24b81dddaa09ecb3ff9524ed78831d7","group_id":"5245f1ed8b5d903704ae7ce6cdb754080e65a17a24fa073173fb9f433cd688c7","id":"ALIGN-0000994","index":994,"input":{"a":"TGCGTATACGCACCCAGAGTGCCCTCAGCTTTTTTGCGGAGCCACTATGC","b":"GCATAGTGGCTCCGCAAAAAAGCTGAGGGCACTCTGGGTGCGTATACGCA","source_sequence":"TGCGTATACGCACCCAGAGTGCCCTCAGCTTTTTTGCGGAGCCACTATGC","threshold":27},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTTGCTTTGAGCTTAGCTCATCCTAAA","aligned_b":"TGTTGCTTTAAGCTTAGCTCATCCTAAA","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"76d02bcb39e3d0c93e2588a0cd028bfbb42c746922beeb8721303d56a0c1902a","group_id":"e2fbb0ab2928c28a2d868af2d0c81024ec03c338827703981c827627557bf9bd","id":"ALIGN-0001007","index":1007,"input":{"a":"TGTTGCTTTGAGCTTAGCTCATCCTAAA","b":"TGTTGCTTTAAGCTTAGCTCATCCTAAA","source_sequence":"TGTTGCTTTGAGCTTAGCTCATCCTAAA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAATCTACGAAGT-CTGT-CCATCCCCTCGCCTGTTACTGGAC--C--AGACT-","aligned_b":"-AGTCT--G--GTCCAGTAACAGGCGAGGGGATG-GAC-AGACTTCGTAGATTA","edit_distance":28,"within_threshold":true},"family":"reverse_complement","fingerprint":"84d64c7ce51e00d9da2a3c5cfe297ba731ddadaf46543c614dcb6e86f562a491","group_id":"61203ecb0bd75b5c19ac011d462069b46b47771ca109152f33818f3dff02cda0","id":"ALIGN-0001014","index":1014,"input":{"a":"TAATCTACGAAGTCTGTCCATCCCCTCGCCTGTTACTGGACCAGACT","b":"AGTCTGGTCCAGTAACAGGCGAGGGGATGGACAGACTTCGTAGATTA","source_sequence":"TAATCTACGAAGTCTGTCCATCCCCTCGCCTGTTACTGGACCAGACT","threshold":28},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGTTCAACCAAGGGTTAAGG-AGAGGACGCCGAAAATGTGACCG","aligned_b":"CTGTTCAACCAAGGGTTTAGGTAGAGGACGCCGAAAATGTGACTG","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"d694260cfea5f212bc83d557c74658134c90bf4f659490e4510a2bfd373d1fd1","group_id":"a23c0949d926488df00b7b69631ec473a7b6aa40a6b9e785451479938e4536cc","id":"ALIGN-0001017","index":1017,"input":{"a":"CTGTTCAACCAAGGGTTAAGGAGAGGACGCCGAAAATGTGACCG","b":"CTGTTCAACCAAGGGTTTAGGTAGAGGACGCCGAAAATGTGACTG","source_sequence":"CTGTTCAACCAAGGGTTAAGGAGAGGACGCCGAAAATGTGACCG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"T--ATCGATAACTGTAGGCATCCCTGCA","aligned_b":"TGCAGGGATGCCTACAGTTATCGAT--A","edit_distance":14,"within_threshold":true},"family":"reverse_complement","fingerprint":"0926fe259ce773b60a1b7a60678efbb1562aef74bcc045647268ed08ec440eb0","group_id":"9ecffa95afca300cd318aadb8cf09c777f90c167b25e27da7b31691ddafdf9ee","id":"ALIGN-0001019","index":1019,"input":{"a":"TATCGATAACTGTAGGCATCCCTGCA","b":"TGCAGGGATGCCTACAGTTATCGATA","source_sequence":"TATCGATAACTGTAGGCATCCCTGCA","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCCCTTACTNNATGTGGAGGGCATTCGT","aligned_b":"TTCCCTTACTNNATGTGGAGGGCAGT-GT","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"60434633a854ffaab48c6865cabcef2e76e65a205909deddc54ea65b41abb3f3","group_id":"5b5aacddc5308b2ab6785853c939b6293930445cda1df96f88885f7a4a10f748","id":"ALIGN-0001023","index":1023,"input":{"a":"TTCCCTTACTNNATGTGGAGGGCATTCGT","b":"TTCCCTTACTNNATGTGGAGGGCAGTGT","source_sequence":"TTCCCTTACTNNATGTGGAGGGCATTCGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGTAGCGTCCTTAGGTCTGATTTGTGGC","aligned_b":"CGGTAGCGTCCTTAGGTCTG-TTTGTGGC","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"363d5dceac795ad911fd732e7fe887e6333e942d622263a53114d7241edf2c97","group_id":"972262e727cf2cfb94ecb73c3dc9c761f1c2ffebeebdd591eff066325047878e","id":"ALIGN-0001027","index":1027,"input":{"a":"CGGTAGCGTCCTTAGGTCTGATTTGTGGC","b":"CGGTAGCGTCCTTAGGTCTGTTTGTGGC","source_sequence":"CGGTAGCGTCCTTAGGTCTGATTTGTGGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGCGATTCCNNGTGAGTCCC-TTCCAGTCCGACGTTTAGCTCGTACGTCG","aligned_b":"CGGCGATTCCNNGTGAGTCCCATTCCAGTCCGAC-TTTAGCTCGTACGTCG","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"1055948298960e532a89fa260520600da9a5e261973da7c2bf153fb6f089019b","group_id":"e84c69f1604314288d5c8ac2e777335c12231ac6c34201cee463ac83c8fd2a35","id":"ALIGN-0001033","index":1033,"input":{"a":"CGGCGATTCCNNGTGAGTCCCTTCCAGTCCGACGTTTAGCTCGTACGTCG","b":"CGGCGATTCCNNGTGAGTCCCATTCCAGTCCGACTTTAGCTCGTACGTCG","source_sequence":"CGGCGATTCCNNGTGAGTCCCTTCCAGTCCGACGTTTAGCTCGTACGTCG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGAAACATGACCGAATTGTGTAGCCTGAGG","aligned_b":"CGGCAACATGACCGAATTGTGTAGCCTGAGG","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"f47f09791eb73eb35659e3b9ee312dcde484e0c715aa2925f9d0274994b221bf","group_id":"9b3fa89947cc9969262ac25f6372bf32b0b87f2bfc7d70dedc745ccef5dffd1c","id":"ALIGN-0001042","index":1042,"input":{"a":"CGGAAACATGACCGAATTGTGTAGCCTGAGG","b":"CGGCAACATGACCGAATTGTGTAGCCTGAGG","source_sequence":"CGGAAACATGACCGAATTGTGTAGCCTGAGG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCTTTG-GG--T-TCT-CAAGAG-GTATGCTCAAGTAGTTATGCCTCCTACAC","aligned_b":"GTGTAGGAGGCATAACTACTTGAGCATA-CCTCTTG-AG--A-ACC-CAAAGAG","edit_distance":28,"within_threshold":false},"family":"reverse_complement","fingerprint":"5744311c7bc14b0b40ec361d777b3316a1bb44b188486a2c2b7aba770853e8cb","group_id":"f5c2b1353fec142998b72fb79c3a7a1e01330d3ace35080091de2c956c01c4eb","id":"ALIGN-0001044","index":1044,"input":{"a":"CTCTTTGGGTTCTCAAGAGGTATGCTCAAGTAGTTATGCCTCCTACAC","b":"GTGTAGGAGGCATAACTACTTGAGCATACCTCTTGAGAACCCAAAGAG","source_sequence":"CTCTTTGGGTTCTCAAGAGGTATGCTCAAGTAGTTATGCCTCCTACAC","threshold":27},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGCTCTAGCNNAGTT-CATCGACCACTTCGCTGCCAGAGCTGGT","aligned_b":"CTGCTCTAGCNNAGTTCCATC-ACCACTTCGCTGCCAGAGCTGGT","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"462c528ba65ddcfa7d72ccbff5cf6a1fdabe201e2f7c4788c640a5bfd468d79d","group_id":"2f028fc5a3540faae405692002e97494be733e6768125d85b0c6032d9f94e9d2","id":"ALIGN-0001048","index":1048,"input":{"a":"CTGCTCTAGCNNAGTTCATCGACCACTTCGCTGCCAGAGCTGGT","b":"CTGCTCTAGCNNAGTTCCATCACCACTTCGCTGCCAGAGCTGGT","source_sequence":"CTGCTCTAGCNNAGTTCATCGACCACTTCGCTGCCAGAGCTGGT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGGCCAGCGCTGCTGCTGCTGCTGCTGCTGCA-ACATTA","aligned_b":"CGGGCCAGCGCTGCTGCTGCTGCTGCTGCTGCATACATTA","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"d984fa91148e508baf3eb5b4c2481498e454e06cc619e1bf822212c10dfd4e53","group_id":"b22b359b5c2d2c35809a1bbd329280e9433813ca7773fc1911b5cb753769bcdf","id":"ALIGN-0001096","index":1096,"input":{"a":"CGGGCCAGCGCTGCTGCTGCTGCTGCTGCTGCAACATTA","b":"CGGGCCAGCGCTGCTGCTGCTGCTGCTGCTGCATACATTA","source_sequence":"CGGGCCAGCGCTGCTGCTGCTGCTGCTGCTGCAACATTA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGATGACCAGTAGTAGTAGTAGTAGTAATTCGGTGA","aligned_b":"TGAGGACCAATAGTAGTAGTAGTAGTAATTGCGTGT","edit_distance":5,"within_threshold":true},"family":"tandem_repeat","fingerprint":"6c9eb544b6f09844b9ddf4924672035d16477d2a9e21742d50c4138f92734691","group_id":"8784662381db58fe792f95dcf88db0a53aa5f77efe97066a8d2c0052ed4870e1","id":"ALIGN-0001116","index":1116,"input":{"a":"TGATGACCAGTAGTAGTAGTAGTAGTAATTCGGTGA","b":"TGAGGACCAATAGTAGTAGTAGTAGTAATTGCGTGT","source_sequence":"TGATGACCAGTAGTAGTAGTAGTAGTAATTCGGTGA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGAGGCATGCGTCCCCCCTCCTGA-GTCCTTCGAACG-GTCG","aligned_b":"CGA-CCGTTCG-AAGGACTCAGGAGGGGGGACGCATGCCTCT","edit_distance":24,"within_threshold":true},"family":"reverse_complement","fingerprint":"a849e92c597ebc457122faa4ca1fc90eea080499d188557cf164287ad5ebb2fa","group_id":"c131d83dd80ab1da9c362023396b8293c3c393f2b41d71a8b9ae827d10cdfebc","id":"ALIGN-0001119","index":1119,"input":{"a":"AGAGGCATGCGTCCCCCCTCCTGAGTCCTTCGAACGGTCG","b":"CGACCGTTCGAAGGACTCAGGAGGGGGGACGCATGCCTCT","source_sequence":"AGAGGCATGCGTCCCCCCTCCTGAGTCCTTCGAACGGTCG","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTATTTATCGTCGTCGTCGTCGTCGTCGTGGCCGGATT","aligned_b":"TGTATTTATCGTCGTCGTCGTGGTCGTCGTGGCCGGAAT","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"3acc52b494cc714efac35efeccc6f8f53fe6fc8040388d0cdda679a2d56d0256","group_id":"e2e214258f94279a3c5b703ced261cd588a99324f250ac1a123a784f5e214c20","id":"ALIGN-0001126","index":1126,"input":{"a":"TGTATTTATCGTCGTCGTCGTCGTCGTCGTGGCCGGATT","b":"TGTATTTATCGTCGTCGTCGTGGTCGTCGTGGCCGGAAT","source_sequence":"TGTATTTATCGTCGTCGTCGTCGTCGTCGTGGCCGGATT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--TCG-GATCACTCA-CACTGCCCATCCTGCCAAGTCCTTATTCCTCACGGGT","aligned_b":"ACCCGTGAGGAATAAGGACTTGGCAGGATGGGCAGT-GTGAGTGATC-C--GA","edit_distance":29,"within_threshold":true},"family":"reverse_complement","fingerprint":"5bfd9593d3b99fbd60228641a8022e6b53224df6fa58f06da71fa5a08d8c2866","group_id":"cbe5e783888ff85351197d588f6bcc353153b81976b0c467c3010cbeda06ced8","id":"ALIGN-0001134","index":1134,"input":{"a":"TCGGATCACTCACACTGCCCATCCTGCCAAGTCCTTATTCCTCACGGGT","b":"ACCCGTGAGGAATAAGGACTTGGCAGGATGGGCAGTGTGAGTGATCCGA","source_sequence":"TCGGATCACTCACACTGCCCATCCTGCCAAGTCCTTATTCCTCACGGGT","threshold":29},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATACCGAAAGTTTTTTTTTTTCGAAAACTGC","aligned_b":"ATACCGAAAG-TTTTTTTTTTCGAAAACTGC","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"20e54e2e49a7eeff7e28ace616c54a1fefa7aee9388e81a13343236a6e8877dc","group_id":"a2811fcf2b2ead4bcc939a9d164139ea575cb22ee83c1ae9060f89e0b92c54f0","id":"ALIGN-0001155","index":1155,"input":{"a":"ATACCGAAAGTTTTTTTTTTTCGAAAACTGC","b":"ATACCGAAAGTTTTTTTTTTCGAAAACTGC","source_sequence":"ATACCGAAAGTTTTTTTTTTTCGAAAACTGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCGTCAACCGTCGCTGAAGG-TCCTGGTG","aligned_b":"CCGTCAACCGTCGCTGCAGGCTCCTGGTG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"1bac79713307cf0921c666fd3c3f445ade326dc9a38155ba96a100624cfe9c33","group_id":"f08699c577bfa522b52ca139f90212c4d4c10ce4bc8c4654f0b214713bdc8727","id":"ALIGN-0001157","index":1157,"input":{"a":"CCGTCAACCGTCGCTGAAGGTCCTGGTG","b":"CCGTCAACCGTCGCTGCAGGCTCCTGGTG","source_sequence":"CCGTCAACCGTCGCTGAAGGTCCTGGTG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGTCGCGAGNNGCATGAAGACCATAACGAAGGGTCGCTAGCG-G","aligned_b":"AGGTCGCGAGNNGCATGAAGACCATAACGAAGGGTCGCTAGCGTG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"ce14a9725d8c6fb1e8df87bdcf4d040cbc4725546844560dc76767246c03502e","group_id":"071a71c15d7099b12037faecba25642ff925cbd6cd0923dfecfe31d3226c3296","id":"ALIGN-0001158","index":1158,"input":{"a":"AGGTCGCGAGNNGCATGAAGACCATAACGAAGGGTCGCTAGCGG","b":"AGGTCGCGAGNNGCATGAAGACCATAACGAAGGGTCGCTAGCGTG","source_sequence":"AGGTCGCGAGNNGCATGAAGACCATAACGAAGGGTCGCTAGCGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCTTTAGAAATAATAATAATAGGTTTCGG","aligned_b":"CTCTTTA-AGATAATAATAATAGGTTTCGG","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"c8c2b121ddd2712117ff0fafe1a66168107184b720f3c4a7e3709ba4e4a84527","group_id":"e6fb13a9cf9111ea196461bdd5740a9b04aa116e8186a38bd02529eda3ba2ea9","id":"ALIGN-0001171","index":1171,"input":{"a":"CTCTTTAGAAATAATAATAATAGGTTTCGG","b":"CTCTTTAAGATAATAATAATAGGTTTCGG","source_sequence":"CTCTTTAGAAATAATAATAATAGGTTTCGG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GGGCC-GT-GATGCTATCGGTGGGATTTAAAGGCAAT","aligned_b":"ATTGCCTTTAAATCCCACCGATAGCA--TCACGGC-CC","edit_distance":20,"within_threshold":false},"family":"reverse_complement","fingerprint":"feb5233371745239b16e86167110a885a7760dbab5c8f89dfbb390bcd15c627b","group_id":"6ff82913aef0987bf37f07541ab21e72a08d855a7a4d08bcfb7adcac9b740c1b","id":"ALIGN-0001174","index":1174,"input":{"a":"GGGCCGTGATGCTATCGGTGGGATTTAAAGGCAAT","b":"ATTGCCTTTAAATCCCACCGATAGCATCACGGCCC","source_sequence":"GGGCCGTGATGCTATCGGTGGGATTTAAAGGCAAT","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAAGCAACTGGGTTTTCACGTTTATCGGTGGGGTG","aligned_b":"CAAGCAACTGGGTTTTCACGTTTATCGGTGGGG-G","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"f12e4bc507d9d9309e445e2e4ca25484700eda9f3eb7f545e25537afb91fc0dd","group_id":"3534720fc5c51852c406f1e8c21f84acb172b8c173e23054d657d4974ca949d1","id":"ALIGN-0001192","index":1192,"input":{"a":"CAAGCAACTGGGTTTTCACGTTTATCGGTGGGGTG","b":"CAAGCAACTGGGTTTTCACGTTTATCGGTGGGGG","source_sequence":"CAAGCAACTGGGTTTTCACGTTTATCGGTGGGGTG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTGGAGCGGCTTTTTTTTTTTTTTTGTACATGTTT","aligned_b":"GTGGAGCGGC-TTTTTTTTTTTTTTGTACATGTTT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"2a5e0c70c0c5ee9aa41f283058f1abe006b8d17179bad7b35e580d95697abc21","group_id":"948c1479594ec2d0b9438ebb6af380548c28953c4a3e591d099ca076b1e6d309","id":"ALIGN-0001195","index":1195,"input":{"a":"GTGGAGCGGCTTTTTTTTTTTTTTTGTACATGTTT","b":"GTGGAGCGGCTTTTTTTTTTTTTTGTACATGTTT","source_sequence":"GTGGAGCGGCTTTTTTTTTTTTTTTGTACATGTTT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTGTTAGCCNNTTGATACGCAGTAA","aligned_b":"GTGTTTAGCCNNTTGATACGCAGTAA","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"55e0ae365460944ad14016a2acc7d67e675f2b293105291437f4066773adb526","group_id":"469533d19dec2de049e3b987048bcd630da5b390982071e2dc87e9e33544f770","id":"ALIGN-0001203","index":1203,"input":{"a":"GTTGTTAGCCNNTTGATACGCAGTAA","b":"GTGTTTAGCCNNTTGATACGCAGTAA","source_sequence":"GTTGTTAGCCNNTTGATACGCAGTAA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCAGCCAAGCCAGTGATTTTTGGCTATC-GAGG-TTAG-AGT","aligned_b":"AC-TCTAA-CC-TCGATAGCCAAAAATCACTGGCTTGGCTGC","edit_distance":24,"within_threshold":true},"family":"reverse_complement","fingerprint":"caddc33f79cd15f65ba3b91b70fdc24cbc5b823e91166a8ca1907a9aeb343d7a","group_id":"ea0e4e0322436665df5ae1e60aa7a866e08bd3b0075973f1490beecfc8d23420","id":"ALIGN-0001209","index":1209,"input":{"a":"GCAGCCAAGCCAGTGATTTTTGGCTATCGAGGTTAGAGT","b":"ACTCTAACCTCGATAGCCAAAAATCACTGGCTTGGCTGC","source_sequence":"GCAGCCAAGCCAGTGATTTTTGGCTATCGAGGTTAGAGT","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGTTGGCTATA-ATGTATTTCC-CCGC","aligned_b":"-GCGGGGAAATACAT-TATAGCCAACCT","edit_distance":14,"within_threshold":true},"family":"reverse_complement","fingerprint":"2c7535a5192a6a0a077692232e71c6dc8a657057b9eec4c2712dc732d343f318","group_id":"7be58f31eb3e79a1de98189e857a0e568c39022e6a87076801eb09ded1da7e00","id":"ALIGN-0001214","index":1214,"input":{"a":"AGGTTGGCTATAATGTATTTCCCCGC","b":"GCGGGGAAATACATTATAGCCAACCT","source_sequence":"AGGTTGGCTATAATGTATTTCCCCGC","threshold":14},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GACGGGCCGCNNAA-ACATCAATAGAAGACCGTGTGGTACTCGGGCGC","aligned_b":"GACGGGCCGCNNAAGTCATCAATAGAAGACCGTGTGGTACTCGGACGC","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"b275881d3b94b1eff43da15bddeb60da5f2d541e51447d35afe33a09e8535578","group_id":"ff9edb6b2fcd20c828937120700f34f925eb8fef323b1551abf08f2d5684b923","id":"ALIGN-0001218","index":1218,"input":{"a":"GACGGGCCGCNNAAACATCAATAGAAGACCGTGTGGTACTCGGGCGC","b":"GACGGGCCGCNNAAGTCATCAATAGAAGACCGTGTGGTACTCGGACGC","source_sequence":"GACGGGCCGCNNAAACATCAATAGAAGACCGTGTGGTACTCGGGCGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGCACTGCGGNNTAATTCCTACTACTAAGCTACATCC","aligned_b":"TGCACTGAGGNNTAATTCCTACTACTAAGCTACATCC","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"5a236c0ab896173989c9d9dd8886e2cc655f0f631fe32dfb86aebc062fafc01e","group_id":"2f77e01d3496170949f1fe6a4076886b159cbc63d242e313f800c9f3d3a5205b","id":"ALIGN-0001233","index":1233,"input":{"a":"TGCACTGCGGNNTAATTCCTACTACTAAGCTACATCC","b":"TGCACTGAGGNNTAATTCCTACTACTAAGCTACATCC","source_sequence":"TGCACTGCGGNNTAATTCCTACTACTAAGCTACATCC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATTCTTTTTGGTGGTGCTTATAAGATACATCACTTGTGT","aligned_b":"GATTC-TTTTGGTGGTGCTTATAAGATACATCACTTGTGT","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"99f69cbd4731d13c25a873699b601506c8e6d00acb51ebc243ae0200571490b0","group_id":"18ed7db7b74e9490925fc508d43055754d8bce5ed1b19532511ed2e997b39d12","id":"ALIGN-0001242","index":1242,"input":{"a":"GATTCTTTTTGGTGGTGCTTATAAGATACATCACTTGTGT","b":"GATTCTTTTGGTGGTGCTTATAAGATACATCACTTGTGT","source_sequence":"GATTCTTTTTGGTGGTGCTTATAAGATACATCACTTGTGT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAT-AGG-TCAGTAGTAGTAGTAGTATTTGGCACG","aligned_b":"CATGAGGTTCAGTAGTAGTAGTAGTATTGGGCAC-","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"ed3671daa23412390730bfa4393852c3426f53293bce43f325b5ce6e37a3df30","group_id":"9dcc78e9ef5c804802de9129cfd4f9af2b1c13872e9b0f585144b9d23d63d7b5","id":"ALIGN-0001281","index":1281,"input":{"a":"CATAGGTCAGTAGTAGTAGTAGTATTTGGCACG","b":"CATGAGGTTCAGTAGTAGTAGTAGTATTGGGCAC","source_sequence":"CATAGGTCAGTAGTAGTAGTAGTATTTGGCACG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACAGACAGCATTTTTTTTTTTTTTAAAGCGGTT","aligned_b":"ACAGACAGCA-TTTTTTTTTTTTTAAAGC-GTT","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"f223902b63671b3ba64e5aa374b67389ce80ad5d252ac716da14b4378c471c76","group_id":"5707479f1fe5465fab1a83cda8db3b279e5e7fb3de4ad9a991526311bce4fc87","id":"ALIGN-0001285","index":1285,"input":{"a":"ACAGACAGCATTTTTTTTTTTTTTAAAGCGGTT","b":"ACAGACAGCATTTTTTTTTTTTTAAAGCGTT","source_sequence":"ACAGACAGCATTTTTTTTTTTTTTAAAGCGGTT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTGTGTCC-ACGGGGGGGGGGGGAGGGTGCATA","aligned_b":"TTGTGTCCTACGGGGGGGGGGGGAGGGTGCATA","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"a1d6f51284187a14cf7f5013a132353e12638a7c5a858e2407329af829dbb3c7","group_id":"b2c00cedae4895bdbf876ee968d741abfafa6b01ad1edc5ce89c7e18a303e9de","id":"ALIGN-0001320","index":1320,"input":{"a":"TTGTGTCCACGGGGGGGGGGGGAGGGTGCATA","b":"TTGTGTCCTACGGGGGGGGGGGGAGGGTGCATA","source_sequence":"TTGTGTCCACGGGGGGGGGGGGAGGGTGCATA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATCTATACANNG-CTTGGCACGGCATGGAAGTGAGGGAAATAATCTTG","aligned_b":"CACCTATACANNGTCTTGGCACGGCATGGAAGTGAGGGAAATAATCTTG","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"29f9203dcc4b597c50505c135a4dc07bb9168f1d31a2b29157ec3ac4ffc763f1","group_id":"0c5de4b5db388d800b5a392198f65e77fe23f0cf6a0dcad05f91bab4f7ab8467","id":"ALIGN-0001323","index":1323,"input":{"a":"CATCTATACANNGCTTGGCACGGCATGGAAGTGAGGGAAATAATCTTG","b":"CACCTATACANNGTCTTGGCACGGCATGGAAGTGAGGGAAATAATCTTG","source_sequence":"CATCTATACANNGCTTGGCACGGCATGGAAGTGAGGGAAATAATCTTG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--TAACGCCGGGCCGCCCAGCATAAAC","aligned_b":"GTTTATGCTGGGCGGCCCGGCGT-TA-","edit_distance":11,"within_threshold":false},"family":"reverse_complement","fingerprint":"78b46338b458f1377a57ab451dc03f228569032fb5a4b7598ff2c6c6f7e5609d","group_id":"ceaa51cf59ea07913bf514af03d6ef19551968fba550f4b92cb194dd64380563","id":"ALIGN-0001324","index":1324,"input":{"a":"TAACGCCGGGCCGCCCAGCATAAAC","b":"GTTTATGCTGGGCGGCCCGGCGTTA","source_sequence":"TAACGCCGGGCCGCCCAGCATAAAC","threshold":10},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGGCCATGCTTTTTTTTTTTTTTTAAAACC-TCTC","aligned_b":"G-GGCCATGC-TTTTTCTTTTTTTTAAAACCATCTC","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"2144379b95654aa487e1d879d3d438c76fa0667ea19e1eb8b13fd299359d8ce7","group_id":"fb31383f7cbaa00039bb81fc8695e914974aa24d0731c1d84f996be5835baefe","id":"ALIGN-0001335","index":1335,"input":{"a":"GCGGCCATGCTTTTTTTTTTTTTTTAAAACCTCTC","b":"GGGCCATGCTTTTTCTTTTTTTTAAAACCATCTC","source_sequence":"GCGGCCATGCTTTTTTTTTTTTTTTAAAACCTCTC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACC-CCAGGCG-CCAACGGGTGTTCCCGGGAACTGT-TTTGCTCGCA","aligned_b":"ACCTACAGGCGCCCAACGGGTGTTCCCGGGAACTGTGTTTGCTCGCA","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"64d6feb12d49086b0091d96ed4d48317b17d686ba9d69f595d21e7f124d3473f","group_id":"6e54743bedb968ccb96bc3caa1547d5e41aba253d076132c68af122fabce1adf","id":"ALIGN-0001347","index":1347,"input":{"a":"ACCCCAGGCGCCAACGGGTGTTCCCGGGAACTGTTTTGCTCGCA","b":"ACCTACAGGCGCCCAACGGGTGTTCCCGGGAACTGTGTTTGCTCGCA","source_sequence":"ACCCCAGGCGCCAACGGGTGTTCCCGGGAACTGTTTTGCTCGCA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGCATGTACCNNGTCC--GCCCACACGTTCC","aligned_b":"TGCATGTACCNNCTCCTGGCCCACACGTTCC","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"f4362eb6ea57a9020ac70b17e9ac045c619b6360544878c94fa9504a0047d225","group_id":"6f9d7a6d9582ae23e8f61fd919a5b6794a1955f391522a0de004e48c8c763f8f","id":"ALIGN-0001348","index":1348,"input":{"a":"TGCATGTACCNNGTCCGCCCACACGTTCC","b":"TGCATGTACCNNCTCCTGGCCCACACGTTCC","source_sequence":"TGCATGTACCNNGTCCGCCCACACGTTCC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"C-C-AAAG-AA-C-TT-GAAGCGAATGATTGCTGACGAG","aligned_b":"CTCGTCAGCAATCATTCGCTTC-AA-G-TT-CT-TTG-G","edit_distance":19,"within_threshold":true},"family":"reverse_complement","fingerprint":"aef67539a2dd24e4ab8b36fd3db04593652ee81e8578ce568044afdb76cab360","group_id":"d6e9aa7f21f3f5b82071a141d7a330b823bf3a0724517ba10b4776e2efe0fe01","id":"ALIGN-0001369","index":1369,"input":{"a":"CCAAAGAACTTGAAGCGAATGATTGCTGACGAG","b":"CTCGTCAGCAATCATTCGCTTCAAGTTCTTTGG","source_sequence":"CCAAAGAACTTGAAGCGAATGATTGCTGACGAG","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGAC-ATG-CAATGTAA-GCGTCCGCCTAATGCCTTAGAAGGTCCCCGT-GC","aligned_b":"GC-ACGGGGACCTTCTAAGGCATTAGGCGGACG-CTTA-CA-TTGCATGTCGC","edit_distance":25,"within_threshold":true},"family":"reverse_complement","fingerprint":"6c38851a3fad1f3df6f7c568a5d659b91723fd8580fd6a16f3f0c22b7f59cbbf","group_id":"a077363386f315cae75599eae45745e6ec000ca3d7774620227bf395c189b9f0","id":"ALIGN-0001374","index":1374,"input":{"a":"GCGACATGCAATGTAAGCGTCCGCCTAATGCCTTAGAAGGTCCCCGTGC","b":"GCACGGGGACCTTCTAAGGCATTAGGCGGACGCTTACATTGCATGTCGC","source_sequence":"GCGACATGCAATGTAAGCGTCCGCCTAATGCCTTAGAAGGTCCCCGTGC","threshold":25},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACCCGCGAGTCGTCGTCGTCGTCGTCTTCAGTACC","aligned_b":"AACCCGCGAGTCGTCGTC-TCGTCGACTTCAGTGCC","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"7ce06b6f24418ded434037b8d20d5138ef3acf673e0755826183fe48e5e9d0a6","group_id":"112b9d611e27443a06aaf6ba0266281598a146b1709673415c338462992f7bb2","id":"ALIGN-0001381","index":1381,"input":{"a":"AACCCGCGAGTCGTCGTCGTCGTCGTCTTCAGTACC","b":"AACCCGCGAGTCGTCGTCTCGTCGACTTCAGTGCC","source_sequence":"AACCCGCGAGTCGTCGTCGTCGTCGTCTTCAGTACC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAACTACTTCTTACCGCAGGTTTTCCCACCAGT-GTGT","aligned_b":"ACAC-ACTGGTGGGAAAACCTGCGGTAAGAAGTAGTTC","edit_distance":24,"within_threshold":false},"family":"reverse_complement","fingerprint":"143036a8bde0039ef24ac8474e3ff25bf13eb356292be74a431f12413f5ae255","group_id":"226b78c18f3d00d7d05a107745ea592d9c61c3196a23097d483b7d7bee5594fe","id":"ALIGN-0001394","index":1394,"input":{"a":"GAACTACTTCTTACCGCAGGTTTTCCCACCAGTGTGT","b":"ACACACTGGTGGGAAAACCTGCGGTAAGAAGTAGTTC","source_sequence":"GAACTACTTCTTACCGCAGGTTTTCCCACCAGTGTGT","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"----TGGCCGAACCTGTCACTTGTCCAGCAATGAG","aligned_b":"CTCATTGCTGGACAAGTGACAGGTTCGGC---CA-","edit_distance":19,"within_threshold":true},"family":"reverse_complement","fingerprint":"a9b2ccdf07f5b5e04a9382e76610d622526062d4a0cc10e26b1ec007aa4ec580","group_id":"22d26ec3c9c0d39876a03f9cc41c750dbf8f79870b98ab6878e348622cf431b9","id":"ALIGN-0001399","index":1399,"input":{"a":"TGGCCGAACCTGTCACTTGTCCAGCAATGAG","b":"CTCATTGCTGGACAAGTGACAGGTTCGGCCA","source_sequence":"TGGCCGAACCTGTCACTTGTCCAGCAATGAG","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATTATGTCACGCCGCCGCCGCCGCCGCCGCC-AATCG","aligned_b":"A-TATGTCACGCCGCCGCC-CCG-CGCCGCCAAATCG","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"96926496121fc8217dcafde4376ab846e82bf63a073ad807b2e97c8cbedd6385","group_id":"a18ff361632e2191d773b711d73456f1e388b9d7af7299ea018e2d204585d03c","id":"ALIGN-0001401","index":1401,"input":{"a":"ATTATGTCACGCCGCCGCCGCCGCCGCCGCCAATCG","b":"ATATGTCACGCCGCCGCCCCGCGCCGCCAAATCG","source_sequence":"ATTATGTCACGCCGCCGCCGCCGCCGCCGCCAATCG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACATGGCCGGGGGGGGGGGGGGTGAATTCTGT","aligned_b":"AA-ATGGCCGGGGGGGGGGGGGGTGAATTCTGT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"4e0e68556ef5bd4979d3584d3e1ef8d79dbd08a55cab59936393420dc2713990","group_id":"2f7e053de948ff9dda8b5a2dc03878d31aa81159f20083933ba1e4387f39acb9","id":"ALIGN-0001425","index":1425,"input":{"a":"AACATGGCCGGGGGGGGGGGGGGTGAATTCTGT","b":"AAATGGCCGGGGGGGGGGGGGGTGAATTCTGT","source_sequence":"AACATGGCCGGGGGGGGGGGGGGTGAATTCTGT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCATGACGAATGCCTACGTC-GGTT","aligned_b":"AAC-CGACGTAGGCATTCGTCATGCT","edit_distance":10,"within_threshold":false},"family":"reverse_complement","fingerprint":"9f41bab4a82d38d1e1b27551edf8f581048469b25d1f9da62f21cc507d9fcfae","group_id":"2a0df30b8cab6ca235286855f22b21871d92b5e3cb73587c2834df79bd99ec9d","id":"ALIGN-0001434","index":1434,"input":{"a":"AGCATGACGAATGCCTACGTCGGTT","b":"AACCGACGTAGGCATTCGTCATGCT","source_sequence":"AGCATGACGAATGCCTACGTCGGTT","threshold":9},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CACCCAGCCCNNCGAGCTATTAGGTGG","aligned_b":"CACCCAGCCCNNCGAGCTATTAGGTGA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"599afae99fd281a5dbde75ba222b12870a438bf3080b7e617f937d04a8cabdfb","group_id":"afc2cfc1b74379f160391924200cba32be0340407746535f3b6e13aa47c7e8c8","id":"ALIGN-0001448","index":1448,"input":{"a":"CACCCAGCCCNNCGAGCTATTAGGTGG","b":"CACCCAGCCCNNCGAGCTATTAGGTGA","source_sequence":"CACCCAGCCCNNCGAGCTATTAGGTGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTAGATAACTG-TTG-TTGTTGTTGTTATAGTGTA","aligned_b":"CTGGATAACTGTTTGCTTGTTGTT-TTATAGTGTA","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"5d9aebd0e5509f3cce87d898d2fcc50ab0ce03b58246ffc13032514dda1c931e","group_id":"9ff1293f76aaf89d3269615a8a633f575d2325220bc77c68ba2e1d4f493fefd6","id":"ALIGN-0001481","index":1481,"input":{"a":"CTAGATAACTGTTGTTGTTGTTGTTATAGTGTA","b":"CTGGATAACTGTTTGCTTGTTGTTTTATAGTGTA","source_sequence":"CTAGATAACTGTTGTTGTTGTTGTTATAGTGTA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCCTAATCANNAAGCGAGCCCACA","aligned_b":"CTCCTAATCANNAAGCGAGCCC-CA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"d2e2844e94e4e1c218dedc76f55887aef495d95c93b1067682b9a480380beef2","group_id":"4ccf4133debf4d7c76b6edb56547089b20998b544bd004d7d182db5b363b5917","id":"ALIGN-0001493","index":1493,"input":{"a":"CTCCTAATCANNAAGCGAGCCCACA","b":"CTCCTAATCANNAAGCGAGCCCCA","source_sequence":"CTCCTAATCANNAAGCGAGCCCACA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCCACCTGATCATCATCATCATCATCATCGTTGGTC","aligned_b":"TCCACCTGATCATCATCATCATGATCATCGTTGGTC","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"73a93b0b75d7bc1de103fb303125221f91bf2fb948167621b8e0fdd783ea7955","group_id":"9c21e9d9b863225040cb53fa4bddca913bb3d5968399ab3976d1e32220547797","id":"ALIGN-0001506","index":1506,"input":{"a":"TCCACCTGATCATCATCATCATCATCATCGTTGGTC","b":"TCCACCTGATCATCATCATCATGATCATCGTTGGTC","source_sequence":"TCCACCTGATCATCATCATCATCATCATCGTTGGTC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATCAAATCCNNACCGTGTACGTTGG-AGTACT","aligned_b":"CATCAAATCCTNACCGTGTACGTTGGAAGTACT","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"52a72522002871fe7fe35402e393068a693859bffd7548f9be023a735f773331","group_id":"6d17d8a13f621a70b4fdb3acef138fc97f85c9685c6afdd939a71b1e45e4f4dd","id":"ALIGN-0001508","index":1508,"input":{"a":"CATCAAATCCNNACCGTGTACGTTGGAGTACT","b":"CATCAAATCCTNACCGTGTACGTTGGAAGTACT","source_sequence":"CATCAAATCCNNACCGTGTACGTTGGAGTACT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TTTTAATTACTTTTTTTTTATGACGCATT","aligned_b":"TTTTAATTACTTTTTTTTTACGACGCATT","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"657a012cd5ebcdb2bc478cbf0eb8c33146a516bf29d1fca52ad62e6f72a47336","group_id":"12d58bf9bfbfdcc3c642310d2f26921a72f36452b7dd38a738cad3b90c0ebc8d","id":"ALIGN-0001515","index":1515,"input":{"a":"TTTTAATTACTTTTTTTTTATGACGCATT","b":"TTTTAATTACTTTTTTTTTACGACGCATT","source_sequence":"TTTTAATTACTTTTTTTTTATGACGCATT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CTA-CCCTCATAAAAAAAAAAATCAGTCCCGA","aligned_b":"CTACCCCTCACTAAAAAAAAAATCAGTCCC-A","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"644006d32e1c095e2a0566b3ffa9215b25dea0ec3ec3cb215b6100640f0814c4","group_id":"fcfc4d99b6c7b064fa4fecc9e4ad7b6791d56ed770b985d998fd4a076d0ffd8f","id":"ALIGN-0001610","index":1610,"input":{"a":"CTACCCTCATAAAAAAAAAAATCAGTCCCGA","b":"CTACCCCTCACTAAAAAAAAAATCAGTCCCA","source_sequence":"CTACCCTCATAAAAAAAAAAATCAGTCCCGA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGACCATTTTCATCATCATCATCATCACAGGG-GCCT","aligned_b":"GGACCATTTTCATCATCATCATCATCACAGGGTGCCT","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"933389de542bfcf94321bd00d671ff4107f3bc15fc3b31c2915a10e52b42d447","group_id":"2c4155e176eabed20cfb4d618feffd9bb499436a9eba4d4b2a44d983ffa0c87a","id":"ALIGN-0001611","index":1611,"input":{"a":"GGACCATTTTCATCATCATCATCATCACAGGGGCCT","b":"GGACCATTTTCATCATCATCATCATCACAGGGTGCCT","source_sequence":"GGACCATTTTCATCATCATCATCATCACAGGGGCCT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"AGCAAGCGATNNACGCTTCG-ATCCTAGTGTTAG","aligned_b":"AGCAAGNCATNNACGCTTCGCATCCTAGTGTTAG","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"06e4116de402395d20519a06b0cbe94d082c0c04584a9934f74750593340243b","group_id":"ee366141016c4b1593d08a3e30e196a233fb506b8807227c44244373debdc7f0","id":"ALIGN-0001688","index":1688,"input":{"a":"AGCAAGCGATNNACGCTTCGATCCTAGTGTTAG","b":"AGCAAGNCATNNACGCTTCGCATCCTAGTGTTAG","source_sequence":"AGCAAGCGATNNACGCTTCGATCCTAGTGTTAG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAACAGTTGG-CCCCCCCCCCGGCACAGTG","aligned_b":"CAACAGTTGGCCCCCCCCCCCGGCACAGTG","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"223c80a3d62c467e0da2eff5d007b1fd8509f562ba315f6aff5a8f191b82007d","group_id":"bfa9510df99aff084f8056eb8ae5de7db45bc13ab7537bfce5d70b72679174b0","id":"ALIGN-0001705","index":1705,"input":{"a":"CAACAGTTGGCCCCCCCCCCGGCACAGTG","b":"CAACAGTTGGCCCCCCCCCCCGGCACAGTG","source_sequence":"CAACAGTTGGCCCCCCCCCCGGCACAGTG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TGGGCCTGGA-NNATTGCGTTTACGTGCATT","aligned_b":"TTGGGCCTGGACNNATTGCGTTTACGTGCATT","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"d0e6ad1b99b0e9493d5b59270c9ba4b743057673845c9594a9f3ba03487dea80","group_id":"2ffc6103dcdfce6cec47742b343dc6c39b2196bfcb79d5c0accccf5c8d54b082","id":"ALIGN-0001723","index":1723,"input":{"a":"TGGGCCTGGANNATTGCGTTTACGTGCATT","b":"TTGGGCCTGGACNNATTGCGTTTACGTGCATT","source_sequence":"TGGGCCTGGANNATTGCGTTTACGTGCATT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATATAGTCT-CCCCCCCCCCCTCAGTATCTT","aligned_b":"CAGATAGTCTCCCCCCCCCCCCTCAGTATCTT","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"9159aa473a27ae43f03540b05f0e9a3774ded807636f6903ba953f609677f69d","group_id":"8abb711f76bb5498476d5dc90ac49aa2f3fb4869cc83a9cc6b76f4513a0bd025","id":"ALIGN-0001730","index":1730,"input":{"a":"CATATAGTCTCCCCCCCCCCCTCAGTATCTT","b":"CAGATAGTCTCCCCCCCCCCCCTCAGTATCTT","source_sequence":"CATATAGTCTCCCCCCCCCCCTCAGTATCTT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAAAAAGGATTTTTTTTTTTTTTTAGCGTTGAG","aligned_b":"TAAAAAGGATTTTTTTTTTGTTTTAGCGTTGAG","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"cb1b1bc4322557bbfc6822762f0367af38eb868acb7dd38fed85e60c821c5d7a","group_id":"f11e305f69a79b248ccbd5af65c1da9d00d7bd18507c3ea4f22b8af495e53046","id":"ALIGN-0001736","index":1736,"input":{"a":"TAAAAAGGATTTTTTTTTTTTTTTAGCGTTGAG","b":"TAAAAAGGATTTTTTTTTTGTTTTAGCGTTGAG","source_sequence":"TAAAAAGGATTTTTTTTTTTTTTTAGCGTTGAG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGCGAAGTACCCCCCCCCCCCGCAGCACTGC","aligned_b":"CACGAAGCACCCCACCCCCCCGCAGCACTGC","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"ca5f5757eba71c9f963c37947b06a12e5daefe4f83eef4595e448ea4222a8330","group_id":"6f186c974c5db32da6a243232b20dec92a8dbfd4d55e39af82fe3b782dbcc8c4","id":"ALIGN-0001740","index":1740,"input":{"a":"CGCGAAGTACCCCCCCCCCCCGCAGCACTGC","b":"CACGAAGCACCCCACCCCCCCGCAGCACTGC","source_sequence":"CGCGAAGTACCCCCCCCCCCCGCAGCACTGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-AACAT-A-TATGCTTTGCACGT-CATCTCGTTGTCAACTTC","aligned_b":"GAAGTTGACAACGAGATG-ACGTGCAAAGC-ATAT-ATGTT-","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"db0188808ac256719cdf421962783b2c98a85470edbce248959a28b5df039870","group_id":"1c8aee9b2bfb6cc344338aaddcd8e88ee486727ec7da11a139507b9312a7e345","id":"ALIGN-0001759","index":1759,"input":{"a":"AACATATATGCTTTGCACGTCATCTCGTTGTCAACTTC","b":"GAAGTTGACAACGAGATGACGTGCAAAGCATATATGTT","source_sequence":"AACATATATGCTTTGCACGTCATCTCGTTGTCAACTTC","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAGAGTACCCTTTTTTTTTTTTTTTTTGAAAGTTAG","aligned_b":"AAGAGTACCCTTTTTTTTTTTTTTTTTGAAAGTTAG","edit_distance":0,"within_threshold":true},"family":"homopolymer","fingerprint":"a94166ee8e63a27b3965a440ce893da368827c75ddbee2d99dfe60f644842d62","group_id":"d6bea1e59d098c9e5a389ac77532e09e1b5cd99aa62e249950863530eb776d9d","id":"ALIGN-0001765","index":1765,"input":{"a":"AAGAGTACCCTTTTTTTTTTTTTTTTTGAAAGTTAG","b":"AAGAGTACCCTTTTTTTTTTTTTTTTTGAAAGTTAG","source_sequence":"AAGAGTACCCTTTTTTTTTTTTTTTTTGAAAGTTAG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTGT-GTGCCCACCACCACCACCACCACCAGCTCCGAGT","aligned_b":"AGTGTAATGCCCACCACCTCCACCACCACCAGCTCC-AGT","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"ddb1c95ff10a91790e7f27e03d525650fa98c173b9b30ae6b4339553bb3ed01c","group_id":"e4dfbc9ba7d02b47c9ebb43a36e242fc3cc4d83f89182179cb1301874bf8fb4d","id":"ALIGN-0001786","index":1786,"input":{"a":"AGTGTGTGCCCACCACCACCACCACCACCAGCTCCGAGT","b":"AGTGTAATGCCCACCACCTCCACCACCACCAGCTCCAGT","source_sequence":"AGTGTGTGCCCACCACCACCACCACCACCAGCTCCGAGT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACATTCATTCNNGTGAAAATGTTTGCGTGCGGGGTTTC","aligned_b":"ACATTCATTANNGTGAAAATGTTTGCGTGCGGGGTTTC","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"b19d3903135e09bd869a8fbab8139de3d99494c3e25ca492cc5be58ffd03a943","group_id":"fc8440d3a70a972cde8c0fde40c5b7596c930b48020c710697ad1cd7679a7703","id":"ALIGN-0001788","index":1788,"input":{"a":"ACATTCATTCNNGTGAAAATGTTTGCGTGCGGGGTTTC","b":"ACATTCATTANNGTGAAAATGTTTGCGTGCGGGGTTTC","source_sequence":"ACATTCATTCNNGTGAAAATGTTTGCGTGCGGGGTTTC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACTTCCACTCTTTTTTTTTAGGTCCGTGC","aligned_b":"ACTTCCA-TCTTTTTTTTTAGGTCCGTGC","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"1478b44f0f4f70fd913792f57bdb9341524c3538acfd3da51476292b52c45982","group_id":"2393fd77da5246d330f317571dc46c78117f43d2025d38ca10c0322e9c97cfcc","id":"ALIGN-0001865","index":1865,"input":{"a":"ACTTCCACTCTTTTTTTTTAGGTCCGTGC","b":"ACTTCCATCTTTTTTTTTAGGTCCGTGC","source_sequence":"ACTTCCACTCTTTTTTTTTAGGTCCGTGC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCTGGCTTCANNGTCTTCA-ACTTTGACAGAGGCACGAT","aligned_b":"GCT-GCTTCANNGTCTTCAGAATTTGACAGAGGAACGAT","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"ae4bb02cec5e53289e1aad5a597ddda5ca3f5c6c652649b041607fdb92728234","group_id":"5364dfcbd507014e7db4042086c3855c627edc6ae4cfae7e9d5775bc1f5e0c84","id":"ALIGN-0001873","index":1873,"input":{"a":"GCTGGCTTCANNGTCTTCAACTTTGACAGAGGCACGAT","b":"GCTGCTTCANNGTCTTCAGAATTTGACAGAGGAACGAT","source_sequence":"GCTGGCTTCANNGTCTTCAACTTTGACAGAGGCACGAT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGAGTGGTGCCCCCCCCCCCCCCTCAGCCAAGT","aligned_b":"GGAGTGGTG-CCCCACCCCCCCCTCAGCCAAGT","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"8bd91e007f843c6dbb1050f2a786e4101f039373a7646a25890f662037c8a5ad","group_id":"cdb67fcdefb6f642c30bdb30ab7f83b16f42d32a1bc00ed31612bde92982c4b8","id":"ALIGN-0001875","index":1875,"input":{"a":"GGAGTGGTGCCCCCCCCCCCCCCTCAGCCAAGT","b":"GGAGTGGTGCCCCACCCCCCCCTCAGCCAAGT","source_sequence":"GGAGTGGTGCCCCCCCCCCCCCCTCAGCCAAGT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAAACTATGGTTGTTGTTGTTCACTGTGGG","aligned_b":"TAGACATTGGTTGTTGTTGTTCACTGT-GG","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"9cf1065dedade8a2375926813a8797aa90bb9d922158792a9f7a463dd05ab289","group_id":"2d2b89a9e6c819d490cc081af345e8ee14f7355cb23c8bf48f4412105948fd4b","id":"ALIGN-0001881","index":1881,"input":{"a":"TAAACTATGGTTGTTGTTGTTCACTGTGGG","b":"TAGACATTGGTTGTTGTTGTTCACTGTGG","source_sequence":"TAAACTATGGTTGTTGTTGTTCACTGTGGG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACCTGTATGAAGATTGGCGCCGGAGGCCGAGA","aligned_b":"TCTCGGCCTCCGGCGCCAATCTTCATACAGGTA","edit_distance":23,"within_threshold":true},"family":"reverse_complement","fingerprint":"931d654e39e497f8bca4ff4d592c7d9b034726245f5d62430fc565847694b50a","group_id":"78d86b979cac5390540b129fd8d67d77f9a7799470089414a93a393ad29644fc","id":"ALIGN-0001884","index":1884,"input":{"a":"TACCTGTATGAAGATTGGCGCCGGAGGCCGAGA","b":"TCTCGGCCTCCGGCGCCAATCTTCATACAGGTA","source_sequence":"TACCTGTATGAAGATTGGCGCCGGAGGCCGAGA","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATTCCATCTCGTCGTCGTCGTCGTAGTAGATG","aligned_b":"TATTCCATCTCGTCGTCG-CATCGTAGTAAATG","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"b6e53ddd3f4850ab15ff71b1abff44c34b475b80326f15aa8999561b554741b8","group_id":"1e17b37559be9234b00dab353bb6f894f838be7e610cdad444fa13f17e9e1fd5","id":"ALIGN-0001891","index":1891,"input":{"a":"CATTCCATCTCGTCGTCGTCGTCGTAGTAGATG","b":"TATTCCATCTCGTCGTCGCATCGTAGTAAATG","source_sequence":"CATTCCATCTCGTCGTCGTCGTCGTAGTAGATG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTTGCTTATTGAGATTGATATAGGCTAGAT-AA-CCGTGTGAG-ACT","aligned_b":"AGT-CTCA-CACGGTT-ATCTAGCCTATATCAATCTCAATAAGCAAG","edit_distance":23,"within_threshold":false},"family":"reverse_complement","fingerprint":"fdfb59ca03e493fbf9f7887d37740138cce1a91eec1017bbd86f34ab4544be7a","group_id":"5c2c956330fe717a3d6a9e2b7956475206c816a530f744c76b84332a96f71ee4","id":"ALIGN-0001904","index":1904,"input":{"a":"CTTGCTTATTGAGATTGATATAGGCTAGATAACCGTGTGAGACT","b":"AGTCTCACACGGTTATCTAGCCTATATCAATCTCAATAAGCAAG","source_sequence":"CTTGCTTATTGAGATTGATATAGGCTAGATAACCGTGTGAGACT","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGCGTACTACTCCTCCTCCTCCTCCTCC-TCAACTGAATC","aligned_b":"-GCGTACTACTTCCCCTCCTCCTCATCCGTCAACTGAATC","edit_distance":5,"within_threshold":false},"family":"tandem_repeat","fingerprint":"190fe808546bd22c0a204ac03352b5011501cb4bab4b54395db8fac008672e03","group_id":"5fa9dc2d0cefd1ceaa8bf4c94cff5ad8acf14d457fbd5d906a8573efe723df5d","id":"ALIGN-0001936","index":1936,"input":{"a":"TGCGTACTACTCCTCCTCCTCCTCCTCCTCAACTGAATC","b":"GCGTACTACTTCCCCTCCTCCTCATCCGTCAACTGAATC","source_sequence":"TGCGTACTACTCCTCCTCCTCCTCCTCCTCAACTGAATC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGCTCAGAGGCGGCGGCGGCGGCGAACGCACCT","aligned_b":"CGCTC-GAGGCGGCGGC-GCGGCGAAC-CACCT","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"d087239a2497d1d651d71871c3fbf05b7bdd45610062461ef420ea3ad6401be2","group_id":"b1382725c00da50ad725de69ae306d8c64bef1bf0f4df0958d1b3b67ba27779f","id":"ALIGN-0001946","index":1946,"input":{"a":"CGCTCAGAGGCGGCGGCGGCGGCGAACGCACCT","b":"CGCTCGAGGCGGCGGCGCGGCGAACCACCT","source_sequence":"CGCTCAGAGGCGGCGGCGGCGGCGAACGCACCT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCATCTT-GGTAAAAAAAAAAGAGCTCCACT","aligned_b":"TCATCTTGGGTAAAGAAAAAACGGCTCCACT","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"a5ce9b74dd6c39f281d68991e976b500708f2a4a837a99cf69ae42543ec94584","group_id":"dd3555f56a376308e23c6f2a4f3f0984265800b10ea53d7987e73878475f630d","id":"ALIGN-0001975","index":1975,"input":{"a":"TCATCTTGGTAAAAAAAAAAGAGCTCCACT","b":"TCATCTTGGGTAAAGAAAAAACGGCTCCACT","source_sequence":"TCATCTTGGTAAAAAAAAAAGAGCTCCACT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGAGACC-GGGNNTTCACTCGCCACTCCAGGCTCATTT","aligned_b":"AGAGACCGGGGNNTTCACTCG-CACTCCAGGGTCATTT","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"eb7c849c24fc90617b79e9dbad5fffa019d980576dc7cb00da34910e467af8ef","group_id":"e50e92c3a878062e6a50c767610cc92ed94e736463b5275f0e036b227c4dbe9f","id":"ALIGN-0001978","index":1978,"input":{"a":"AGAGACCGGGNNTTCACTCGCCACTCCAGGCTCATTT","b":"AGAGACCGGGGNNTTCACTCGCACTCCAGGGTCATTT","source_sequence":"AGAGACCGGGNNTTCACTCGCCACTCCAGGCTCATTT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"GGAATCGGCGTTGTTGTTGTTGTTGTTGTTCTTAGCTCG","aligned_b":"GGAATCGGCGTT-TTGTTGTTGTTGTTGTACTTAG-TCG","edit_distance":3,"within_threshold":false},"family":"tandem_repeat","fingerprint":"cb800c8b9607f1567c73b9b2473fc9d4c926b2980f80321bb700d408311a353b","group_id":"e63391b76fccd2f6ed9ca93d136d478aa0b4805f4bd67299a649a748f1f08dfb","id":"ALIGN-0002006","index":2006,"input":{"a":"GGAATCGGCGTTGTTGTTGTTGTTGTTGTTCTTAGCTCG","b":"GGAATCGGCGTTTTGTTGTTGTTGTTGTACTTAGTCG","source_sequence":"GGAATCGGCGTTGTTGTTGTTGTTGTTGTTCTTAGCTCG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTTAA-CCAGG-GGGG-GGGGGGGTACGATTATG","aligned_b":"CGTTAACCCAGGAGGGGCGGGTGGGTACGATTATG","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"2b179b7e88e5697068889997fff1e51654ca2511bb88fa83d6fe3085bc3ba6da","group_id":"15d01b354d22b33445f92e25645347bc9b99f497c50fda9218285690ce149a11","id":"ALIGN-0002010","index":2010,"input":{"a":"CGTTAACCAGGGGGGGGGGGGGTACGATTATG","b":"CGTTAACCCAGGAGGGGCGGGTGGGTACGATTATG","source_sequence":"CGTTAACCAGGGGGGGGGGGGGTACGATTATG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"-CTCAGGCA-A-GCCCATATAGCAAACT","aligned_b":"AGTTTGCTATATGGGC-T-T-GCCTGAG","edit_distance":18,"within_threshold":true},"family":"reverse_complement","fingerprint":"7385e7de0d2c2ddef032b6d28167b6561c623e7272ecc4c75d7e5034497203f1","group_id":"9c3c0e1df1cb12eb7107a15a68a798cc4b26cd21f4de28d9121790afa466e9f5","id":"ALIGN-0002044","index":2044,"input":{"a":"CTCAGGCAAGCCCATATAGCAAACT","b":"AGTTTGCTATATGGGCTTGCCTGAG","source_sequence":"CTCAGGCAAGCCCATATAGCAAACT","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGTGTTCAG-CTTCCATGTATTGG","aligned_b":"CGGGGTTCAGCCTTCCATGTATTGG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"e757acc969befe81f5a40a8e6b05c35c5d8789da9e6e6dd7ada1b18082522822","group_id":"6cf6898fd2495e73158a96cb6f62f848a736016bc95bd4fd6f524ea723f8eb64","id":"ALIGN-0002047","index":2047,"input":{"a":"CGGTGTTCAGCTTCCATGTATTGG","b":"CGGGGTTCAGCCTTCCATGTATTGG","source_sequence":"CGGTGTTCAGCTTCCATGTATTGG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGGTCG-CTAAAGGGCGGCGCCGTTCCGTCTTATTA","aligned_b":"TAATAAGACGGAACGGCGCCGCCCTTTAG-CGACCGC","edit_distance":21,"within_threshold":true},"family":"reverse_complement","fingerprint":"083263df4588ea84d9ed0ce2d1e07c2edfb14829c3ed59af834455bd967e5748","group_id":"c75cfb6bfdd96e250a18f906daef74b5fbab617370f5c5621017fad5c63ccde4","id":"ALIGN-0002059","index":2059,"input":{"a":"GCGGTCGCTAAAGGGCGGCGCCGTTCCGTCTTATTA","b":"TAATAAGACGGAACGGCGCCGCCCTTTAGCGACCGC","source_sequence":"GCGGTCGCTAAAGGGCGGCGCCGTTCCGTCTTATTA","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACAACAATTAAAAAAAAATCTTCAAGC","aligned_b":"TACAACATTTAAAAAAAAATCTTCAAGC","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"4eeb288e663de8ba78aa1aad786c5b66bdd3efcf0d6f9ec732ac398934ef9147","group_id":"ae54bc67f1e61119cfb65a197ce95c2b7f0f036f1e4eb986f2aa9fc33f2a69fe","id":"ALIGN-0002060","index":2060,"input":{"a":"TACAACAATTAAAAAAAAATCTTCAAGC","b":"TACAACATTTAAAAAAAAATCTTCAAGC","source_sequence":"TACAACAATTAAAAAAAAATCTTCAAGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCATAGTGCTAATGTCAAGCTTAGAAT","aligned_b":"TCACATGGCTAATGTCAAGCTTAGAAT","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"f3cafebff999626a260246b4232b3e68f6cfdd968d4c20cb35d5d67b2ebeb1c9","group_id":"93a00967fba85f7e4270c35755fbf61edfa90b3546feb3094dba4eef616b8a5c","id":"ALIGN-0002062","index":2062,"input":{"a":"TCATAGTGCTAATGTCAAGCTTAGAAT","b":"TCACATGGCTAATGTCAAGCTTAGAAT","source_sequence":"TCATAGTGCTAATGTCAAGCTTAGAAT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGACTACGCANNGAATCTCGTTCTTTACTACCGCTGTAAC","aligned_b":"CGA-TACGCANNGAATCTCGTTCTTTACTACCGCTG-AAC","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"c43574701294f85a7ffacea06afec48f338577041f94c35bb48241e9f8f12777","group_id":"5d593d0b30d494daebf547d31fda387ae2353a6f8f5eb715e514c32a66c0af7e","id":"ALIGN-0002068","index":2068,"input":{"a":"CGACTACGCANNGAATCTCGTTCTTTACTACCGCTGTAAC","b":"CGATACGCANNGAATCTCGTTCTTTACTACCGCTGAAC","source_sequence":"CGACTACGCANNGAATCTCGTTCTTTACTACCGCTGTAAC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGTGCAACAGCAGCAGCAGCA-GCAGCAGCCGACCACAT","aligned_b":"ATGTGCAACAGCAGCAGCAGCAGGCTGCAGCCGAACACAT","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"6eb184179daf0a6724bbd613a91094b85abcc193153dc5286ac08cab436494f4","group_id":"1d8ed0a5c0e871d649d7193568595f787d84d7b795776c1c1a6777791e8bc4a1","id":"ALIGN-0002076","index":2076,"input":{"a":"ACGTGCAACAGCAGCAGCAGCAGCAGCAGCCGACCACAT","b":"ATGTGCAACAGCAGCAGCAGCAGGCTGCAGCCGAACACAT","source_sequence":"ACGTGCAACAGCAGCAGCAGCAGCAGCAGCCGACCACAT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTCACGTTGCTGTTGTCAGT-G-ATACAGTGG--CGACCTGTACCT","aligned_b":"CTCACGTTGCTGTTGTCAGTGGAATACAGTGGTCCGACCTGTACCT","edit_distance":5,"within_threshold":false},"family":"clustered_indels","fingerprint":"c69239cffe5d4fc75e7168f65c5d34a43fb613bc1424c56c3281fae2a3b415c7","group_id":"9dcdbe397fc2e61f452a309530dc7fd99e7952c9843aa7f8ea81ed41dd3bf49b","id":"ALIGN-0002097","index":2097,"input":{"a":"GTCACGTTGCTGTTGTCAGTGATACAGTGGCGACCTGTACCT","b":"CTCACGTTGCTGTTGTCAGTGGAATACAGTGGTCCGACCTGTACCT","source_sequence":"GTCACGTTGCTGTTGTCAGTGATACAGTGGCGACCTGTACCT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGGAGCGATNNTACGGAAGCGCGATTAGGTGCCTTTCCGTTACCTA","aligned_b":"ACGGAGCGATANTACGGAAGCGCGATTAGGTGCCTTTCCGTTACCTA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"ae5f22e8cbd20b8349d1e24ebf122837b23ec949960a73db5c901364583beae2","group_id":"cb94b15140df59039fd46476d5d00a10dec7885e9648d7878e094e7479197dd9","id":"ALIGN-0002108","index":2108,"input":{"a":"ACGGAGCGATNNTACGGAAGCGCGATTAGGTGCCTTTCCGTTACCTA","b":"ACGGAGCGATANTACGGAAGCGCGATTAGGTGCCTTTCCGTTACCTA","source_sequence":"ACGGAGCGATNNTACGGAAGCGCGATTAGGTGCCTTTCCGTTACCTA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCGGTAGTAANNGGAGTGCT-C-ACTAGAAT","aligned_b":"CCGGTAGTAANNAGAGTGCTGCAACTAGAAT","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"74977cdd0ccd5853b19c512e015e45a9d0e5655a8d0278cd48f38d87b49cbeae","group_id":"84c1a8f15005ac941beaceea03be55c8228442fdc998737e1ab026391f70c886","id":"ALIGN-0002113","index":2113,"input":{"a":"CCGGTAGTAANNGGAGTGCTCACTAGAAT","b":"CCGGTAGTAANNAGAGTGCTGCAACTAGAAT","source_sequence":"CCGGTAGTAANNGGAGTGCTCACTAGAAT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACATAAAAAAAT-AATAA-TAATAATAATAATGGGAA-CGAG","aligned_b":"ACATAAAAAAATCAATAATTAATAATAATAATGGGAACCGAG","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"126e3d1a667737dab95d2694475ea5afd7e59d0474d8975692ae91cb10f70aa0","group_id":"9c90b4a93f00dbf0c3a65874b739b774e879d1b03623d4abd111399cfc13aabd","id":"ALIGN-0002121","index":2121,"input":{"a":"ACATAAAAAAATAATAATAATAATAATAATGGGAACGAG","b":"ACATAAAAAAATCAATAATTAATAATAATAATGGGAACCGAG","source_sequence":"ACATAAAAAAATAATAATAATAATAATAATGGGAACGAG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"GACCTGCGTGTTTTTTTTTTTTTTTAACCACCTAG","aligned_b":"GACC-GCGTG-TTTTTTTTTTTTTTAACCACCTAG","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"c76528bb058a306d775150eaa27856528e6c80ed921a570da9782a3eb973c648","group_id":"7835f4edf6842233f18ebf64ac269031d4639824e42ae06f43e027d79993329d","id":"ALIGN-0002200","index":2200,"input":{"a":"GACCTGCGTGTTTTTTTTTTTTTTTAACCACCTAG","b":"GACCGCGTGTTTTTTTTTTTTTTAACCACCTAG","source_sequence":"GACCTGCGTGTTTTTTTTTTTTTTTAACCACCTAG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"ACTACTGGAGAGTGGATGCTCCGATTACT","aligned_b":"ACTACTGGAGAGTGGATGC-CCGATTACT","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"3997660aac320c8589ec4b5412afca8d2f15560a2859fa8553a00b560ee423e4","group_id":"14246a1191d13062978e3f810c9b33b1749e8c8eefae5ef8de76e0329e7bb315","id":"ALIGN-0002212","index":2212,"input":{"a":"ACTACTGGAGAGTGGATGCTCCGATTACT","b":"ACTACTGGAGAGTGGATGCCCGATTACT","source_sequence":"ACTACTGGAGAGTGGATGCTCCGATTACT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCTAAT-ACAANNTGAAATTTACGTTATATGACTC","aligned_b":"CCTGATGACAANNTGAAANTTACNTTATATGACCC","edit_distance":5,"within_threshold":true},"family":"literal_N","fingerprint":"4389e3c2f4a5deb8b57fbed48381a6157b13d239c898a9b1ec1ed03fb2bd7ab1","group_id":"9463f7ebc1623bb933ac65732de5d26897ab4421dc812789f1463a76be34f18d","id":"ALIGN-0002213","index":2213,"input":{"a":"CCTAATACAANNTGAAATTTACGTTATATGACTC","b":"CCTGATGACAANNTGAAANTTACNTTATATGACCC","source_sequence":"CCTAATACAANNTGAAATTTACGTTATATGACTC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"-GGCTTGATACATG-TTCGGAGCTAGCACCGGATCA-AACCCTTGTGA","aligned_b":"TCACAAG-GGTTTGATCCGGTGCTAGCTCC-GAACATGTATCAAG-CC","edit_distance":26,"within_threshold":true},"family":"reverse_complement","fingerprint":"eb575ea73639220d00cd6a9a4b8d10424dd70aa027403deb712a4a8955a153dc","group_id":"6232e52f35c9a824226d3328bffd7bdb6f9dbbbb122a597ebc2165b3d3219fbe","id":"ALIGN-0002269","index":2269,"input":{"a":"GGCTTGATACATGTTCGGAGCTAGCACCGGATCAAACCCTTGTGA","b":"TCACAAGGGTTTGATCCGGTGCTAGCTCCGAACATGTATCAAGCC","source_sequence":"GGCTTGATACATGTTCGGAGCTAGCACCGGATCAAACCCTTGTGA","threshold":26},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CCGCCACTCAAGAAGAAGAAGAAGTGTTAACGC","aligned_b":"CC-CCACTCAAGAAGAAGAAGAAGTGTTAACGC","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"0b65eae03456e1dcd65d50281ea62526480ba409320ed6ee7ca966ab1f27a4fd","group_id":"039a5ae38b430aaf99a59afade083fe95f80c58a88507c3437010e86c6899cd8","id":"ALIGN-0002316","index":2316,"input":{"a":"CCGCCACTCAAGAAGAAGAAGAAGTGTTAACGC","b":"CCCCACTCAAGAAGAAGAAGAAGTGTTAACGC","source_sequence":"CCGCCACTCAAGAAGAAGAAGAAGTGTTAACGC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACGCTAGCGTAGTAGT-AGTAGTAGTCGAACTC","aligned_b":"-CCGCCAGCGTAGTAGTGAGTAGTAGTCGAACTC","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"b1daf9f722dd5f54f574b5778317c2dbf697f01a398a6373c6f19caeac5d0991","group_id":"3225c86b4a5ae0bcf30c3dc9b6b2a096ce09b79fa07f8801fdb8d4a13e7a4f4b","id":"ALIGN-0002331","index":2331,"input":{"a":"AACGCTAGCGTAGTAGTAGTAGTAGTCGAACTC","b":"CCGCCAGCGTAGTAGTGAGTAGTAGTCGAACTC","source_sequence":"AACGCTAGCGTAGTAGTAGTAGTAGTCGAACTC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATGACTGCGNNGACAGATA-GCA-GGCACGAAACTGG","aligned_b":"GATG-C-GCGNNGACAGATACGCATGGCACGAAACTGG","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"add3e4e0a9cf3b3e167a0e7c234c229751e84c7a3b8599c06610e032678d6de5","group_id":"2a31a599da8966d19506ccd1823155a8f257ea723a39c28977f10a6e516db09c","id":"ALIGN-0002368","index":2368,"input":{"a":"GATGACTGCGNNGACAGATAGCAGGCACGAAACTGG","b":"GATGCGCGNNGACAGATACGCATGGCACGAAACTGG","source_sequence":"GATGACTGCGNNGACAGATAGCAGGCACGAAACTGG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTTGCCGAGGCCCCCCCCCTCTAGCTTAG","aligned_b":"TTTGCCGAGGCCCCCCCCC-CTAGC-TAG","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"f2721543681ebb7395b439f3d4648e42b3eae19932bd2ff76dbdb5479a5562a2","group_id":"07f3ecc1d42a75f2aa317a023e9d15aae9e6afda29dfb5db8526e6dadf596da7","id":"ALIGN-0002375","index":2375,"input":{"a":"TTTGCCGAGGCCCCCCCCCTCTAGCTTAG","b":"TTTGCCGAGGCCCCCCCCCCTAGCTAG","source_sequence":"TTTGCCGAGGCCCCCCCCCTCTAGCTTAG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCTAAACATNNGACACTCACCATGATAGGGAGATCTGTCCGATCGT","aligned_b":"TTCTAAACATNNGACACTCA-CATGATAGGGAGATCTGTCCGATCGT","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"d0a26987fdd9e71ff7a7a97deb54cd4b3fbab1a1216e1622824ad714a26aaf34","group_id":"17f01fd7fe413c91f37d9b1f7f82ffa6fd08fc161e2f8a6de303722c4c4832db","id":"ALIGN-0002378","index":2378,"input":{"a":"TTCTAAACATNNGACACTCACCATGATAGGGAGATCTGTCCGATCGT","b":"TTCTAAACATNNGACACTCACATGATAGGGAGATCTGTCCGATCGT","source_sequence":"TTCTAAACATNNGACACTCACCATGATAGGGAGATCTGTCCGATCGT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CACCA-GGAAGNNCCCCCAGACT-GTCCTGGA-ACTGGGAG","aligned_b":"CACCATGGAAGNNCCCCCAGACTAGTCCTGGATGCTGGGAG","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"6b29dba755fb5b9eb0698bb2e7cd2803e22d445ae82cba176ae97c10375caaa8","group_id":"b4bf8ca3b71fc78fc5751aab091467c4779ddd976d74f27f359914c57e27118f","id":"ALIGN-0002383","index":2383,"input":{"a":"CACCAGGAAGNNCCCCCAGACTGTCCTGGAACTGGGAG","b":"CACCATGGAAGNNCCCCCAGACTAGTCCTGGATGCTGGGAG","source_sequence":"CACCAGGAAGNNCCCCCAGACTGTCCTGGAACTGGGAG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTAAATATACTGGGGGGATCTCTTG","aligned_b":"CAAGAGATCCCCCCAGTATATTTAC","edit_distance":15,"within_threshold":true},"family":"reverse_complement","fingerprint":"8210e0add2989f1f00b793d132f8bd77d8619c89f65ac5a85216bfec124f3f6d","group_id":"330b33c97a2d2073913c0257cbaa3be3ff79dec9a452683efc618836b7ebba5a","id":"ALIGN-0002389","index":2389,"input":{"a":"GTAAATATACTGGGGGGATCTCTTG","b":"CAAGAGATCCCCCCAGTATATTTAC","source_sequence":"GTAAATATACTGGGGGGATCTCTTG","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTTCCCCGCACCA-CCACCACCACCTGTTTAACG","aligned_b":"TTTCCCCGCACCACCCTCCACCACCTGATTAACG","edit_distance":3,"within_threshold":false},"family":"tandem_repeat","fingerprint":"399183b246382ac3ef4201b56d8c3e3dbb99a39ece300cb09ec2e61dc91ca989","group_id":"eeb0ebe1d41b828b728cfe7ad571c973744a115c9e9b460f26ced18cdc5ecd3c","id":"ALIGN-0002391","index":2391,"input":{"a":"TTTCCCCGCACCACCACCACCACCTGTTTAACG","b":"TTTCCCCGCACCACCCTCCACCACCTGATTAACG","source_sequence":"TTTCCCCGCACCACCACCACCACCTGTTTAACG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CCATTGGGCCNNGTTTAGGCCCAGATGAGCTCTTCCGCACG","aligned_b":"GCAGTGGGCCNNNTTTAGGCCCAGATGAGCGCTTCCGCATG","edit_distance":5,"within_threshold":true},"family":"literal_N","fingerprint":"8010625ff1158fc681c73f1210babea653d3625eceb68656296f92f39606fe9c","group_id":"71cf519933551b6b9976dccf39a8b460144bab74492c8d3312ab22d9bf2c6a8e","id":"ALIGN-0002423","index":2423,"input":{"a":"CCATTGGGCCNNGTTTAGGCCCAGATGAGCTCTTCCGCACG","b":"GCAGTGGGCCNNNTTTAGGCCCAGATGAGCGCTTCCGCATG","source_sequence":"CCATTGGGCCNNGTTTAGGCCCAGATGAGCTCTTCCGCACG","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"GGATTGTGAANNATAGATACATTTTGA","aligned_b":"-GATTGTGAANNATAGATACAATTTGA","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"ee12187e556739b035be4dd6518f4cf285a4991eb1ed4a567c813385b28219f0","group_id":"1c7f8f83a46dd12c0d7000e8caffe52209ac55ca6ede8d8588279df5bfca1589","id":"ALIGN-0002513","index":2513,"input":{"a":"GGATTGTGAANNATAGATACATTTTGA","b":"GATTGTGAANNATAGATACAATTTGA","source_sequence":"GGATTGTGAANNATAGATACATTTTGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGACAC-ATCNNAGTTCCCGCTGTCCT-TGT","aligned_b":"CTGACACAATCNNAGTT-CCGTTGTCCTATGT","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"dbba055d8786b3911b37013b857e4d1d65ca300e75813407a2b4fc140e376887","group_id":"23bf2c9f33d1c788dde3a51a441ca4eaa5d17665cac768d7c33d43acd4442bba","id":"ALIGN-0002543","index":2543,"input":{"a":"CTGACACATCNNAGTTCCCGCTGTCCTTGT","b":"CTGACACAATCNNAGTTCCGTTGTCCTATGT","source_sequence":"CTGACACATCNNAGTTCCCGCTGTCCTTGT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCATCGC-AGGCCGCCGCCGCCTCCTACATG","aligned_b":"GCATCGCGAGGCAGCCGCCGCC-CCTACATG","edit_distance":3,"within_threshold":false},"family":"tandem_repeat","fingerprint":"520600f370d0ae5fffd671b306373b8876ed62e489973a436da538586015cbe7","group_id":"580f14ddf72fc3314a840cf393a9f296c906cd001197589a450fb67588585989","id":"ALIGN-0002546","index":2546,"input":{"a":"GCATCGCAGGCCGCCGCCGCCTCCTACATG","b":"GCATCGCGAGGCAGCCGCCGCCCCTACATG","source_sequence":"GCATCGCAGGCCGCCGCCGCCTCCTACATG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTCGTCACCGCCAGCCATGCCGGCGA","aligned_b":"TCCCGTCA-CG-C-GCCATGCCGGCGA","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"f115821e5d320fd9ebc720c27b6ac340707853f35c8ad0dc71090cd19a0e45b8","group_id":"4ce0176fc140663ecc9888220d9c9c88d38ac4dbace0f57012b3f1bc0708a9b9","id":"ALIGN-0002547","index":2547,"input":{"a":"TCTCGTCACCGCCAGCCATGCCGGCGA","b":"TCCCGTCACGCGCCATGCCGGCGA","source_sequence":"TCTCGTCACCGCCAGCCATGCCGGCGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCGCCTCGACTGCAATAATGACTATTTCGCAATGACATC","aligned_b":"CCGCCTCGACTGCAATAATGACTATTTCGC-A-GACATC","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"8b3b185bbe85ae5fce318d0ab369ef221b2a252b56cb87920b8ef81600d312d7","group_id":"3228cfe3508753c12ebde10bc74a1588d31e749a836cf5f1611ad9e63ea60891","id":"ALIGN-0002557","index":2557,"input":{"a":"CCGCCTCGACTGCAATAATGACTATTTCGCAATGACATC","b":"CCGCCTCGACTGCAATAATGACTATTTCGCAGACATC","source_sequence":"CCGCCTCGACTGCAATAATGACTATTTCGCAATGACATC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCGAGCGACGTTTTTTTTTGTTATACACG","aligned_b":"CCGAGCGA-GTTTTTTTTTGTTATACACG","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"b6c12ee6c34e0c733beee0b0ee845db39b55a947e686bdd1ccbb466a85621874","group_id":"d63740f10db23959bb93815667bae093991787e6fc65d303cfc4639510deb616","id":"ALIGN-0002570","index":2570,"input":{"a":"CCGAGCGACGTTTTTTTTTGTTATACACG","b":"CCGAGCGAGTTTTTTTTTGTTATACACG","source_sequence":"CCGAGCGACGTTTTTTTTTGTTATACACG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATGGT--CAT-T-AAGGCTAACATCCACATGGTACTGT","aligned_b":"ACAGTACCATGTGGATGTTAGCCT-TA-AT-G-ACCAT","edit_distance":18,"within_threshold":false},"family":"reverse_complement","fingerprint":"24673621b6e6ff761b9d7ef9c92111bdb8bea3c77595e1aec25af45cc3a45958","group_id":"ff63845362df1b601c32719496c9713c6066032504976919920f366a62fe4726","id":"ALIGN-0002574","index":2574,"input":{"a":"ATGGTCATTAAGGCTAACATCCACATGGTACTGT","b":"ACAGTACCATGTGGATGTTAGCCTTAATGACCAT","source_sequence":"ATGGTCATTAAGGCTAACATCCACATGGTACTGT","threshold":17},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATGAGCACAGTTTTTTTTTCTGTGGAAAG","aligned_b":"ATGAGCACAG-TTTTTTTTCTGTGGAACG","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"a95747f39396fff7931a3fea8f31fcb337390b8d95169c38fa117016e80ae8f8","group_id":"64fd1d57484d8f04c37371c2d69c2b477c0f27b51ce26f416f2b9bd3aa7c8c8f","id":"ALIGN-0002575","index":2575,"input":{"a":"ATGAGCACAGTTTTTTTTTCTGTGGAAAG","b":"ATGAGCACAGTTTTTTTTCTGTGGAACG","source_sequence":"ATGAGCACAGTTTTTTTTTCTGTGGAAAG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTAACCTTGCTGCTGCTGCTGCTGCTAGAGTGGTT","aligned_b":"GTTAACCTTGCTTCTGCTGCTGCTGCTAGAGT-GTT","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"2a12bb401912cfee2f77d416f3f4592ec6ac7a6ad6a1fbcf3ae4641a31d6171f","group_id":"5e30f43f1e44d9df327b266a37fb4571506668f7e30d8973d8d0807c635051f1","id":"ALIGN-0002586","index":2586,"input":{"a":"GGTAACCTTGCTGCTGCTGCTGCTGCTAGAGTGGTT","b":"GTTAACCTTGCTTCTGCTGCTGCTGCTAGAGTGTT","source_sequence":"GGTAACCTTGCTGCTGCTGCTGCTGCTAGAGTGGTT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-G-CT-TGTGG-GAATCGCCTGTTATTCA","aligned_b":"TGAATAACAGGCGATTC-CC--ACAAGC-","edit_distance":17,"within_threshold":true},"family":"reverse_complement","fingerprint":"4f33fa5f0ceab9ad35bbb7c7c9f0aacfa3199ee0a7603e1d658bec38b02f4e60","group_id":"fb3d1c954ba1e386267997a5e99915333020c4eab620e09f08ceba9d54e4a6eb","id":"ALIGN-0002599","index":2599,"input":{"a":"GCTTGTGGGAATCGCCTGTTATTCA","b":"TGAATAACAGGCGATTCCCACAAGC","source_sequence":"GCTTGTGGGAATCGCCTGTTATTCA","threshold":17},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGACCCCAGTGGACTTTTCCAAGCGGTCTGGT","aligned_b":"CGACCCCA-TGGACTTTTCCAAGCGGTCTGGT","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"833fb677003f7b73e824e23fa12f1c985fbd932374e3df5cd3f97b0e860c86a9","group_id":"4f85086dbab0e218b26b2317a65a7f28cacddc577eebf3b29f58900aaba89350","id":"ALIGN-0002607","index":2607,"input":{"a":"CGACCCCAGTGGACTTTTCCAAGCGGTCTGGT","b":"CGACCCCATGGACTTTTCCAAGCGGTCTGGT","source_sequence":"CGACCCCAGTGGACTTTTCCAAGCGGTCTGGT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGGCGCGTCCNNGGGTCAGCCATGGTAC","aligned_b":"GGGCGCG-CCNNGGGTCAGCCATGGTAT","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"72cc40ef615e3a1746fe318cc82982c3067f5fc2514dbaf143da2f6a88b19dea","group_id":"fd1584cbbb0de6333c448fed7254e5215d1de9229100e0161e2043b9e7760a83","id":"ALIGN-0002613","index":2613,"input":{"a":"GGGCGCGTCCNNGGGTCAGCCATGGTAC","b":"GGGCGCGCCNNGGGTCAGCCATGGTAT","source_sequence":"GGGCGCGTCCNNGGGTCAGCCATGGTAC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACCTAGCG-CTTGCCTGT-ACTCCTTGACTGAAAAGTCGACA-AC","aligned_b":"-GTTGTCGACTTTTCAGTCAAGGAGT-ACAGGCAAG-CGCTAGGT","edit_distance":25,"within_threshold":false},"family":"reverse_complement","fingerprint":"2103058a09f810b56773e706ea4e50c05234d6eb41bf6fb7ff7b38ea41a7e4b9","group_id":"c9a9c7cda95a03b0d69656f5e9e39ccd28d6b7ae4c48cd13f5a087931e227222","id":"ALIGN-0002624","index":2624,"input":{"a":"ACCTAGCGCTTGCCTGTACTCCTTGACTGAAAAGTCGACAAC","b":"GTTGTCGACTTTTCAGTCAAGGAGTACAGGCAAGCGCTAGGT","source_sequence":"ACCTAGCGCTTGCCTGTACTCCTTGACTGAAAAGTCGACAAC","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTTCGCTTGNNGCAAGGCATATTCA","aligned_b":"GGTT-GCTTGNNGCAAGGCATATTCA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"580b32b9a290f8aabbfc492b43f4f95b03bb730e1f41b95a240c7fb3290d0166","group_id":"9e0b868d3642c8ce89be600e3b08f1d462860a018470528e2b31bef1ce25c882","id":"ALIGN-0002643","index":2643,"input":{"a":"GGTTCGCTTGNNGCAAGGCATATTCA","b":"GGTTGCTTGNNGCAAGGCATATTCA","source_sequence":"GGTTCGCTTGNNGCAAGGCATATTCA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GG-GACTCTATGTT-GTTGTGGTGCTGTT","aligned_b":"GGTGACTCTATGTTATTTGTGGTG-GGTT","edit_distance":5,"within_threshold":true},"family":"tandem_repeat","fingerprint":"567dddc59c6a2f37d2b6aeb0f7f88e9d2cd4fc5106c9f2f2c17e421dba041195","group_id":"d8546c33d45ebdb655e66ec5130ec8dbf30a808a697a0360352471df7d535ec8","id":"ALIGN-0002656","index":2656,"input":{"a":"GGGACTCTATGTTGTTGTGGTGCTGTT","b":"GGTGACTCTATGTTATTTGTGGTGGGTT","source_sequence":"GGGACTCTATGTTGTTGTGGTGCTGTT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGAAGCCTTTCGTCGTCGTCGTCGTCG-TCGCTGGTTTGA","aligned_b":"CGAAG-CTTTCGTCGTCGTCGTCGTCGCTCGCTCGTTTGA","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"79c89709fefd9eeba8192d9327687bef8948d44e282511c3350e8fb08c9f81a7","group_id":"fe1327d93f5c4823fab8d30e7d329fdc398caf90326599916cfe0691ed192dfb","id":"ALIGN-0002661","index":2661,"input":{"a":"CGAAGCCTTTCGTCGTCGTCGTCGTCGTCGCTGGTTTGA","b":"CGAAGCTTTCGTCGTCGTCGTCGTCGCTCGCTCGTTTGA","source_sequence":"CGAAGCCTTTCGTCGTCGTCGTCGTCGTCGCTGGTTTGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GATAGGATCGAGTCGACTGGAACG","aligned_b":"CGTTCCAGTCGACTCGA-TCCTATC","edit_distance":13,"within_threshold":true},"family":"reverse_complement","fingerprint":"e7b39cceeb9143faaf3a42ac6ce778f573eb36dd7374aa253c2d1fb6267b0bff","group_id":"df4d103fb7ff4e09e807e9e24e1c26f4765697232a7fda30148e37d4e29ea5f5","id":"ALIGN-0002664","index":2664,"input":{"a":"GATAGGATCGAGTCGACTGGAACG","b":"CGTTCCAGTCGACTCGATCCTATC","source_sequence":"GATAGGATCGAGTCGACTGGAACG","threshold":13},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACTAG-TGAATCTCCT-CTGCGCCCA-T","aligned_b":"ACTAGATGAATCTCCTCCTGCGCCCACT","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"15f07e6322d4f38ca13189ef3373bc4c4bfaa396ef70672f78980283e94dd789","group_id":"ed161a6d75d3433f2f2870e3f949e833ca4d48d9dbdc0b42baccfeeae3977401","id":"ALIGN-0002672","index":2672,"input":{"a":"ACTAGTGAATCTCCTCTGCGCCCAT","b":"ACTAGATGAATCTCCTCCTGCGCCCACT","source_sequence":"ACTAGTGAATCTCCTCTGCGCCCAT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACTAGTACTGCGGT-CAAATATGGACTATCGGA-TGCAA","aligned_b":"TTGCA-TCCGATAGTCCATAT-TTGACCGCAGTACTAGTA","edit_distance":22,"within_threshold":false},"family":"reverse_complement","fingerprint":"cb2bca0ed312d93a770d4f7c23c6273a412d2986c61d00b482648789d211ac76","group_id":"3705a6b7cc6b9f980fac9add4b4bccad6f39e5d5a65294ff6bffecdf53629cc8","id":"ALIGN-0002679","index":2679,"input":{"a":"TACTAGTACTGCGGTCAAATATGGACTATCGGATGCAA","b":"TTGCATCCGATAGTCCATATTTGACCGCAGTACTAGTA","source_sequence":"TACTAGTACTGCGGTCAAATATGGACTATCGGATGCAA","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"AGGAGCCGATNNTGATAACTATTACCTT","aligned_b":"AGGAGCCGATNNT-ATAACTATTA-CTT","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"0979012c33d74fd6c23944e0baba0754c405f76bbc8209397d05cd1a63fc88c4","group_id":"d95ea84186e664a8acd6c28982142ef7e036387a43522b9912ce52728b7666a0","id":"ALIGN-0002698","index":2698,"input":{"a":"AGGAGCCGATNNTGATAACTATTACCTT","b":"AGGAGCCGATNNTATAACTATTACTT","source_sequence":"AGGAGCCGATNNTGATAACTATTACCTT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TCCCACTCAANNTGTCCTCTC-AGACTTG-CCACT","aligned_b":"GCCCACT-AANNTGTCCTCTCAAGACTTGCCCTCT","edit_distance":5,"within_threshold":true},"family":"literal_N","fingerprint":"fdfaf118c54973ae209430459b3114f57d3ed3b62c46860a478b6d287ba46ef8","group_id":"d889053d0722c75ce5727f80f2aae4c6ef767b9080c404543e32831f30b7e5ff","id":"ALIGN-0002718","index":2718,"input":{"a":"TCCCACTCAANNTGTCCTCTCAGACTTGCCACT","b":"GCCCACTAANNTGTCCTCTCAAGACTTGCCCTCT","source_sequence":"TCCCACTCAANNTGTCCTCTCAGACTTGCCACT","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGGCCGGATTCCTCCTCCTCCTCCTCCCATGCCGCT","aligned_b":"T-GCCGGATTCCT-CTCCTCCTCCTCCCATGCCGCT","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"eb58293c2cd5dbb5793f3686991f0cfda20a3662725dd03a239ebfe58f49f147","group_id":"7a2e9377e59eba90df2539262d958fe78cf24d8230824fe12d810641f3927663","id":"ALIGN-0002736","index":2736,"input":{"a":"TGGCCGGATTCCTCCTCCTCCTCCTCCCATGCCGCT","b":"TGCCGGATTCCTCTCCTCCTCCTCCCATGCCGCT","source_sequence":"TGGCCGGATTCCTCCTCCTCCTCCTCCCATGCCGCT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTTGTCGCGGT-AGTAGTA-GTAGTAAAGTGC-CTA","aligned_b":"TTTGTCGCGGTCAGTAGTAGGAAGTAAA-TGCTCTA","edit_distance":5,"within_threshold":true},"family":"tandem_repeat","fingerprint":"1cdc819c4b9272c2751af3f065c99db570adc1da8b5e170fb6c3dfc595cc19e9","group_id":"b5cd2cd1660e5da45c841d8043c83fff65f3913fc2e00c9a51249c97a4379896","id":"ALIGN-0002771","index":2771,"input":{"a":"TTTGTCGCGGTAGTAGTAGTAGTAAAGTGCCTA","b":"TTTGTCGCGGTCAGTAGTAGGAAGTAAATGCTCTA","source_sequence":"TTTGTCGCGGTAGTAGTAGTAGTAAAGTGCCTA","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--TTAAGGTCGACCGACA-AGGGAACTATGGC-GACGACATTCGGG","aligned_b":"CCCGAATGTCG-TCGCCATAGTTCCCT-TGTCGGTCGACCTT--AA","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"15b2e166ef5dbecd48adcf49fa59d11644eda58486e6c459cdee9ddbef591de1","group_id":"d87834012eb254ac3e30e58d1b580c3b10af73f74c55a1c9d3083f3068c7f030","id":"ALIGN-0002789","index":2789,"input":{"a":"TTAAGGTCGACCGACAAGGGAACTATGGCGACGACATTCGGG","b":"CCCGAATGTCGTCGCCATAGTTCCCTTGTCGGTCGACCTTAA","source_sequence":"TTAAGGTCGACCGACAAGGGAACTATGGCGACGACATTCGGG","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATAGGGAT-AACCCCCCCC-CCCCCCCCATGGCAAA","aligned_b":"ATATGGATCAACCCCCCCCTCCCCCCCCATGGCAAA","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"8ebda997f7064f5f12cfb3ac70f0c24ef8bcce9ecac2368342d12341b073102e","group_id":"5d86b29f9e379df4c4582cef3244a49222dd67cb0faee0a9752889b39f18200e","id":"ALIGN-0002800","index":2800,"input":{"a":"ATAGGGATAACCCCCCCCCCCCCCCCATGGCAAA","b":"ATATGGATCAACCCCCCCCTCCCCCCCCATGGCAAA","source_sequence":"ATAGGGATAACCCCCCCCCCCCCCCCATGGCAAA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCTGCTTTGGTGGTGGTGGTCGAAGTCAC","aligned_b":"-TCTGCTTTGGTGGTGG-GGTGGAAGTC-C","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"5452150299348085e9839b79822e47830d0dc2491f940961340a1d54311485d1","group_id":"9c3c41e9665be82765e5b1bb53085842eb228c461e425ca41e217918387a5bb6","id":"ALIGN-0002816","index":2816,"input":{"a":"CTCTGCTTTGGTGGTGGTGGTCGAAGTCAC","b":"TCTGCTTTGGTGGTGGGGTGGAAGTCC","source_sequence":"CTCTGCTTTGGTGGTGGTGGTCGAAGTCAC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTGTTATTAACCGAGGCGGACCTTATTA-CT-C-CCTC-G---AGATC-TC","aligned_b":"-GAG--A-T-CTCGA-G-GGA-GTAATAAGGTCCGCCTCGGTTAATAACACC","edit_distance":26,"within_threshold":false},"family":"reverse_complement","fingerprint":"9559bf21581bdf65739a46caffa7728679ad1bffe27e83f6ce9fc8bc20685d7a","group_id":"dc288afb7ebaf2a1ed0d74316c6635153b781ca5d083393c8a58e122c4d5b913","id":"ALIGN-0002819","index":2819,"input":{"a":"GGTGTTATTAACCGAGGCGGACCTTATTACTCCCTCGAGATCTC","b":"GAGATCTCGAGGGAGTAATAAGGTCCGCCTCGGTTAATAACACC","source_sequence":"GGTGTTATTAACCGAGGCGGACCTTATTACTCCCTCGAGATCTC","threshold":25},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTTCGTGGATTCCGCTACTATCCC-TTCTCACCCCCAAGAGAGCTG","aligned_b":"CGTTCGTGGATT-CGCTACTATCCCTTTCTCACCCCCAAGAGAGCTG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"af9f42387aa5ae7d7461a861dccfdd1d9c84f6309f13977160845f8f7c858ad6","group_id":"a6f5609335ecc7810b5b5b72b28ce59287cc87d54ca8eaf5fa2f76f443525444","id":"ALIGN-0002847","index":2847,"input":{"a":"CGTTCGTGGATTCCGCTACTATCCCTTCTCACCCCCAAGAGAGCTG","b":"CGTTCGTGGATTCGCTACTATCCCTTTCTCACCCCCAAGAGAGCTG","source_sequence":"CGTTCGTGGATTCCGCTACTATCCCTTCTCACCCCCAAGAGAGCTG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTCGCCGTTTT-TTTTTTTTTTTTTTTGATTTGACA","aligned_b":"ACTCGCCGTTTTGTTTTTTTTTTTTTTTGATTTGACA","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"9a35f26ae9c2d18bf2cc9c8240dc69c807b50dda2265b30fc161168d9547a801","group_id":"18cf62871850c6f72bdb97d60835e953f0b58de6fb9ee8ab4e342f56541b9a98","id":"ALIGN-0002856","index":2856,"input":{"a":"AGTCGCCGTTTTTTTTTTTTTTTTTTTGATTTGACA","b":"ACTCGCCGTTTTGTTTTTTTTTTTTTTTGATTTGACA","source_sequence":"AGTCGCCGTTTTTTTTTTTTTTTTTTTGATTTGACA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTATTGGCTTAATAATAATAATAATAATAAAGCTCTG-GG","aligned_b":"GTATTGGCTTAATAATAATAATAAT-ATAAAGCTCTGTGG","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"28c30c2038ccaeeec9dab85c724260ceec39155a685bea311ba6f8ea621466ed","group_id":"d1fd5363b41acdc36319a65515da8c633f67bdd2349086c5e36a36a135986b6e","id":"ALIGN-0002876","index":2876,"input":{"a":"GTATTGGCTTAATAATAATAATAATAATAAAGCTCTGGG","b":"GTATTGGCTTAATAATAATAATAATATAAAGCTCTGTGG","source_sequence":"GTATTGGCTTAATAATAATAATAATAATAAAGCTCTGGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTAACGATTACTACTACTACTACTACTTATG-TCAG","aligned_b":"CGTAACGATTACTACTAC-A-TACTACTTATGATCAG","edit_distance":3,"within_threshold":false},"family":"tandem_repeat","fingerprint":"2f7321fa0e92cace7ebc355c715afc11d92fd80e79eeff24a0951d70353b87f6","group_id":"c9e674438bfd8ed5e676a2ce08cd58063b250d8c935cf1694284827a7ff61907","id":"ALIGN-0002911","index":2911,"input":{"a":"CGTAACGATTACTACTACTACTACTACTTATGTCAG","b":"CGTAACGATTACTACTACATACTACTTATGATCAG","source_sequence":"CGTAACGATTACTACTACTACTACTACTTATGTCAG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACACTCAGTATTCCCGTCAGGC-CA-T-A","aligned_b":"-TA-T-GGCCTGACGGGAATACTGAGTGT","edit_distance":19,"within_threshold":true},"family":"reverse_complement","fingerprint":"fbac60b6b0d4fe7379d832f833544b034533b25b52ee33a3be3293df7042b199","group_id":"20964a993321814e5fa721eb37912da3eab57513c0cb843d3d0d597f1e5efc0f","id":"ALIGN-0002924","index":2924,"input":{"a":"ACACTCAGTATTCCCGTCAGGCCATA","b":"TATGGCCTGACGGGAATACTGAGTGT","source_sequence":"ACACTCAGTATTCCCGTCAGGCCATA","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACAGGATAGG-GTACGCTACCTCGCCCTAAAAAGAGGAATGAT","aligned_b":"-CATGATAGGCGTACGCTACCTCGCCCT-AACAGAGGAATGAT","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"cb06e2234cd4145b5e80a282a79f0e38d523cd2288f1a88f993e06ac6a735aaf","group_id":"adc6d36b1e3c2a7603f9d9c740091c02f0a06116c7d15af78a7d033e8380969c","id":"ALIGN-0002927","index":2927,"input":{"a":"ACAGGATAGGGTACGCTACCTCGCCCTAAAAAGAGGAATGAT","b":"CATGATAGGCGTACGCTACCTCGCCCTAACAGAGGAATGAT","source_sequence":"ACAGGATAGGGTACGCTACCTCGCCCTAAAAAGAGGAATGAT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTGTCCGCTTATTA-TTATTATTA-TTATTATTGAGG-ATC","aligned_b":"TGTGTGCGCTTATTACTAATTATTAGTTATTATTGAGGAATC","edit_distance":5,"within_threshold":true},"family":"tandem_repeat","fingerprint":"d32630966ab79b0f5f9bb3cdfc01029b3881dd4d4a88891ca113e6139352056a","group_id":"c8b2f2f9cc5df9a4a6164918596c699bac94adb7d693b9e89244f8bfe1e2a094","id":"ALIGN-0002931","index":2931,"input":{"a":"TGTGTCCGCTTATTATTATTATTATTATTATTGAGGATC","b":"TGTGTGCGCTTATTACTAATTATTAGTTATTATTGAGGAATC","source_sequence":"TGTGTCCGCTTATTATTATTATTATTATTATTGAGGATC","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGTAAGAGACCATATAG-GTC-GAGCT","aligned_b":"AGCT-CGA-CCTATATGGTCTCTTACCT","edit_distance":12,"within_threshold":true},"family":"reverse_complement","fingerprint":"71c5aa0c777feaba6667d8d5a55b3a8348f63aee492837f9e94e1e6a5f269247","group_id":"e93f9bf32dffe9212df5c5091745e7219ea58de1fec0b2d5d9dfff6aa5d7e9ce","id":"ALIGN-0002954","index":2954,"input":{"a":"AGGTAAGAGACCATATAGGTCGAGCT","b":"AGCTCGACCTATATGGTCTCTTACCT","source_sequence":"AGGTAAGAGACCATATAGGTCGAGCT","threshold":12},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GAAGACCAGT--CTTTTTCTAGCGCCCGGTACCGGTTCTCT","aligned_b":"AGAGAACCGGTACCGGGCGCTAG-AAAAAG-ACTGG-TCTTC","edit_distance":22,"within_threshold":false},"family":"reverse_complement","fingerprint":"fd5e19c6219191f363e28835e2c07f54d00048cc0c164534beff755c5e794d33","group_id":"5881e6c51e2dea9461f3d09b3faf522763c9abf4516c63c63f6a15fb2fb60c06","id":"ALIGN-0002959","index":2959,"input":{"a":"GAAGACCAGTCTTTTTCTAGCGCCCGGTACCGGTTCTCT","b":"AGAGAACCGGTACCGGGCGCTAGAAAAAGACTGGTCTTC","source_sequence":"GAAGACCAGTCTTTTTCTAGCGCCCGGTACCGGTTCTCT","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCC-CACTGATTTTTTTTTTTTTCTTAAGAAGT","aligned_b":"GCCTCAC-GATTTTTTTTTTTTTCTTAAGAAGT","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"90368a5231540e1ee33bb27157ac3cab907a1dc9326031c4ac0ec726a0c4bd72","group_id":"0cdb85afaa4b7fc4695b11d9cef3a2835dc315551d8de842c1e86bcd291520a4","id":"ALIGN-0002965","index":2965,"input":{"a":"GCCCACTGATTTTTTTTTTTTTCTTAAGAAGT","b":"GCCTCACGATTTTTTTTTTTTTCTTAAGAAGT","source_sequence":"GCCCACTGATTTTTTTTTTTTTCTTAAGAAGT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAACTCGAAGNNGCAAGCTTAGGGCCTGGATAAGG-TGGTACCTGCTGGT","aligned_b":"C-ACTCGAAG-NGCAAGCTTAGGGCCTGGATAAGGCTGGTACCTCCTGG-","edit_distance":5,"within_threshold":true},"family":"literal_N","fingerprint":"67c38468662e1846e0e4c478122e41c54ff404dc459d1258773cdf101d47ebe2","group_id":"2a194c83888f71b489f717d33fd198e284b920b726f01f1962c567ef27baf12a","id":"ALIGN-0002973","index":2973,"input":{"a":"CAACTCGAAGNNGCAAGCTTAGGGCCTGGATAAGGTGGTACCTGCTGGT","b":"CACTCGAAGNGCAAGCTTAGGGCCTGGATAAGGCTGGTACCTCCTGG","source_sequence":"CAACTCGAAGNNGCAAGCTTAGGGCCTGGATAAGGTGGTACCTGCTGGT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGGCTACTGACTGGAAAGCCCCGACGAAAAATTTC--TCTCTAG-TT","aligned_b":"-AACTA--GAGAGAAATTTTTCGTCGGGGCTTTCCAGTCAGTAGCCA","edit_distance":27,"within_threshold":true},"family":"reverse_complement","fingerprint":"1a93df8eb5301324696cd7c5d1e7242b1245db1d765d29d963bf67b05a068d3b","group_id":"ff4caa53d647d1ca1842327e4dbab7adf99d71f924436c9b579cbc1260adf93d","id":"ALIGN-0002979","index":2979,"input":{"a":"TGGCTACTGACTGGAAAGCCCCGACGAAAAATTTCTCTCTAGTT","b":"AACTAGAGAGAAATTTTTCGTCGGGGCTTTCCAGTCAGTAGCCA","source_sequence":"TGGCTACTGACTGGAAAGCCCCGACGAAAAATTTCTCTCTAGTT","threshold":28},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AATGATAGTTAAAAAAAAAAAATCAA-GTACGT","aligned_b":"AATGATAGTT-AAAAAAAAAAATCAACGTACGT","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"45f90a0d8ce7f4303dcfaeddb9426aca68b275c61e28e04e649c2af47225a31e","group_id":"f5b6f6ab920f2ecc02f98e1d85f3e046226cd7f3f1fd4a915546bf97bd48f851","id":"ALIGN-0002980","index":2980,"input":{"a":"AATGATAGTTAAAAAAAAAAAATCAAGTACGT","b":"AATGATAGTTAAAAAAAAAAATCAACGTACGT","source_sequence":"AATGATAGTTAAAAAAAAAAAATCAAGTACGT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGCTCTATCGGGGGGGGGGGGCTTGCCCAC","aligned_b":"TGCTCTATC-GGGGGGGGGGGCTTGCCCAC","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"16f2800a1fae7b4cb6e1230e333cb0caa6eeee0c88be8e75dc8c850ceec1d780","group_id":"978528f5a9dafebcb69ff249410454c92f7dbb865e665fd069dfc35e96465762","id":"ALIGN-0002981","index":2981,"input":{"a":"TGCTCTATCGGGGGGGGGGGGCTTGCCCAC","b":"TGCTCTATCGGGGGGGGGGGCTTGCCCAC","source_sequence":"TGCTCTATCGGGGGGGGGGGGCTTGCCCAC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"ATTCTTATGTAAAAAAAAAATCCAGGGCCT","aligned_b":"A-TCTTATGTAAACAAAAAATCCAGGGCCT","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"57bf99fc64179169e0d597bb7bf245e14c97330786bd964a0e324b7ad86578ca","group_id":"d5f5bf876d5da7ac1c430a84a31d90253815ec2518058c0da3fd75db9f06217b","id":"ALIGN-0003005","index":3005,"input":{"a":"ATTCTTATGTAAAAAAAAAATCCAGGGCCT","b":"ATCTTATGTAAACAAAAAATCCAGGGCCT","source_sequence":"ATTCTTATGTAAAAAAAAAATCCAGGGCCT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTATCGCTTAATAATAATAATAATAATTCGATAACG","aligned_b":"CTATCGC-TAATAATAATAATAATAATTCGATAACG","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"42595a092208ba64ad9867857c0755f4f979f4c70303ecc5f4670be31195a3c3","group_id":"2615a95153179c39f287f14baefbf44596e238a4d774ae44a5fb461085a1261a","id":"ALIGN-0003031","index":3031,"input":{"a":"CTATCGCTTAATAATAATAATAATAATTCGATAACG","b":"CTATCGCTAATAATAATAATAATAATTCGATAACG","source_sequence":"CTATCGCTTAATAATAATAATAATAATTCGATAACG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATGTATTGCGTGCAAGGAATAGGT","aligned_b":"GATGTATTGCGTGCAAGGAATAGG-","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"1fd41ae28580e0d9ff09a47a324a7a61eb955b19d4324ab170ba1d68f5062361","group_id":"3d253adf8b096fc7833f29fd5102b3f294c0c9d7e9f24b1b8365023b02d88dd0","id":"ALIGN-0003032","index":3032,"input":{"a":"GATGTATTGCGTGCAAGGAATAGGT","b":"GATGTATTGCGTGCAAGGAATAGG","source_sequence":"GATGTATTGCGTGCAAGGAATAGGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATTAG-CTCGANNCTCTTATCGCTCCTTATCGTGTCT","aligned_b":"ATTAGCCTCGA-NCTCTTATNGCT-CTTATCGTGTCC","edit_distance":5,"within_threshold":false},"family":"literal_N","fingerprint":"2dc52ec66f72fd3b575e78db4aece1de513b69c5a4848a0064a69e7a5078e52c","group_id":"c8d1700d0adbd13b51e405f68cf8824a81fbabe4e9470451c3eed9cc6032da33","id":"ALIGN-0003033","index":3033,"input":{"a":"ATTAGCTCGANNCTCTTATCGCTCCTTATCGTGTCT","b":"ATTAGCCTCGANCTCTTATNGCTCTTATCGTGTCC","source_sequence":"ATTAGCTCGANNCTCTTATCGCTCCTTATCGTGTCT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGACTTGGACCCCCCCCCCCCCCACCATCAGTC","aligned_b":"CGGACTTGGTCCCCCCCCCCCCCC-CCATCAGT-","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"dc78b41073c45ba7e3206f4c1b519ecd9f461a4f517fb81e7052a5bb2cd06357","group_id":"0b64ee733d064c1227d459ff1e2740753cd68ceeaeb214d95cde6de1746d7db4","id":"ALIGN-0003045","index":3045,"input":{"a":"CGGACTTGGACCCCCCCCCCCCCCACCATCAGTC","b":"CGGACTTGGTCCCCCCCCCCCCCCCCATCAGT","source_sequence":"CGGACTTGGACCCCCCCCCCCCCCACCATCAGTC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TGTATATGGCGCCACCCTCTGTTT","aligned_b":"AAACAGAGGGTGGCGCCATAT-ACA","edit_distance":15,"within_threshold":true},"family":"reverse_complement","fingerprint":"7e2c06f9e53cfa204c7971c536dd042a68b31d703ea4a4add35a95c9b10e2040","group_id":"c4fef3d3a8421a8bdf298110c689bf6bdfe258dac88b24cb25936e843d49656e","id":"ALIGN-0003049","index":3049,"input":{"a":"TGTATATGGCGCCACCCTCTGTTT","b":"AAACAGAGGGTGGCGCCATATACA","source_sequence":"TGTATATGGCGCCACCCTCTGTTT","threshold":16},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGCAGACGTTATTCTCTCGTTCTTTACGATC","aligned_b":"CGCAGACGTTATTCTCTCGGTCTTTATG-TC","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"9843cfaf88727bc4f9935dc5868b2187e5872deddf21f6f26f58b8c60dc97072","group_id":"872b5bd7badaff82d0a383ef8421608d51b4ab0713506615ff5ac4c52a1ca823","id":"ALIGN-0003052","index":3052,"input":{"a":"CGCAGACGTTATTCTCTCGTTCTTTACGATC","b":"CGCAGACGTTATTCTCTCGGTCTTTATGTC","source_sequence":"CGCAGACGTTATTCTCTCGTTCTTTACGATC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGTTTAACATCGG-GTAACTCCCAGAGATAG","aligned_b":"GCCTTTAACA-CGGAGTAACTCCCA-AGATAG","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"b43cf51fbcbd9d98f244fcb851acf9d5e294a2cd2683188b0989505f9ff00994","group_id":"2b980ccf9bf74a7179fe18fe715a62a002046f989ecfa1a7efd9bdde99159311","id":"ALIGN-0003067","index":3067,"input":{"a":"GCGTTTAACATCGGGTAACTCCCAGAGATAG","b":"GCCTTTAACACGGAGTAACTCCCAAGATAG","source_sequence":"GCGTTTAACATCGGGTAACTCCCAGAGATAG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCGACTCGCGGGGGGGGGGTT-ATGGGTTA","aligned_b":"-TCGACTCGCGGGGGGGGGGTTAATGGGTTA","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"178c2ea9d921b790450b866208c20718719f0a9fa284032f8d288824f2dcb436","group_id":"9718443dd093cd442ba7a377bdd68c72d3179e946393a29c6343ce2f74a4c1dd","id":"ALIGN-0003090","index":3090,"input":{"a":"CTCGACTCGCGGGGGGGGGGTTATGGGTTA","b":"TCGACTCGCGGGGGGGGGGTTAATGGGTTA","source_sequence":"CTCGACTCGCGGGGGGGGGGTTATGGGTTA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACCTTCAATTTTTTTTTGTCAGCCACG","aligned_b":"AACCTTCAATTTTTTTTTGTCAGCCACG","edit_distance":0,"within_threshold":true},"family":"homopolymer","fingerprint":"8476ed6ca7d5268a071a6947a2db9032252aaed1ecd6cb4a840d3de16791c9f5","group_id":"993ffa85a1236d15d575995408c9ca16582ac5a8a78c0cfd1762edcb410353db","id":"ALIGN-0003095","index":3095,"input":{"a":"AACCTTCAATTTTTTTTTGTCAGCCACG","b":"AACCTTCAATTTTTTTTTGTCAGCCACG","source_sequence":"AACCTTCAATTTTTTTTTGTCAGCCACG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAATGGAGTC-GGGGGGGGGGGGGGGACCAGGATTT","aligned_b":"GAATGGAGTCGGGGGGGGGGGGGGGGACCAGGATTT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"14596d9c79e69df1a180e611395d91f139d1780121b65224301bbaf3b2dbfe40","group_id":"a6c27c73edac00bdcd207f65725cf22815b0609cce8562e63a08caeaa57b64e5","id":"ALIGN-0003105","index":3105,"input":{"a":"GAATGGAGTCGGGGGGGGGGGGGGGACCAGGATTT","b":"GAATGGAGTCGGGGGGGGGGGGGGGGACCAGGATTT","source_sequence":"GAATGGAGTCGGGGGGGGGGGGGGGACCAGGATTT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATAGCCCTCTAAATAGTGATTCGTTGGCTAGA-TCCTGGC","aligned_b":"GCCAG-GATCTAGCCAACGAATCACTATTTAGAGGGCTATG","edit_distance":23,"within_threshold":true},"family":"reverse_complement","fingerprint":"ee7d16501d8a7c050505889e8938878763d2cc6c3d2e0acae66a98272ae0860a","group_id":"b8262483a2c819a0d0a911e139aa15ec27c9202a5ed08fe54f84fe6ebdcc50f8","id":"ALIGN-0003114","index":3114,"input":{"a":"CATAGCCCTCTAAATAGTGATTCGTTGGCTAGATCCTGGC","b":"GCCAGGATCTAGCCAACGAATCACTATTTAGAGGGCTATG","source_sequence":"CATAGCCCTCTAAATAGTGATTCGTTGGCTAGATCCTGGC","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAT-CTCCCAAGCAGCAGCAGCCAGCCCGAC","aligned_b":"GATACTCCCAAGCAGCAGCAGCCAGCCCGAC","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"374bdc379d3707f866ace3ee38130b46d55d11c28cefc7f76fd593434d99dd5f","group_id":"2d2c4d35ec055c6a11591bd1594edfb50f18fac4e4dfd9b2617fcd111f562258","id":"ALIGN-0003151","index":3151,"input":{"a":"GATCTCCCAAGCAGCAGCAGCCAGCCCGAC","b":"GATACTCCCAAGCAGCAGCAGCCAGCCCGAC","source_sequence":"GATCTCCCAAGCAGCAGCAGCCAGCCCGAC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AC-GGAAAACAATGAGCCACAAACACAATGAAATCAACGA","aligned_b":"ACGGGAAAAC-ATGAGCCACAAACACAATGAAATAAACGA","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"a80fd4e31e6ebb9f75e4e22a2781edf1d187393388aae7ccffb2eb1090fcc6e0","group_id":"bff7d2b5f6a99b0b5e56b5451d0aa97b1d9846316e98401efd221452cd352b83","id":"ALIGN-0003152","index":3152,"input":{"a":"ACGGAAAACAATGAGCCACAAACACAATGAAATCAACGA","b":"ACGGGAAAACATGAGCCACAAACACAATGAAATAAACGA","source_sequence":"ACGGAAAACAATGAGCCACAAACACAATGAAATCAACGA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TTTT-GATAATC-GGGTCCTCCCCAATGCA-GCC","aligned_b":"TTTTCGCTAATCGGGGTCCT-CCCAATGCATGCC","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"8f7e4822755eb82a57428843aadef84e78c1c6f1d146011d1124cb6238378f4e","group_id":"69f43c5fe80d170c82855cf973aa672ce181fd167a5a898b22218acaa3b651ca","id":"ALIGN-0003157","index":3157,"input":{"a":"TTTTGATAATCGGGTCCTCCCCAATGCAGCC","b":"TTTTCGCTAATCGGGGTCCTCCCAATGCATGCC","source_sequence":"TTTTGATAATCGGGTCCTCCCCAATGCAGCC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"A-TGGCCTGTCNNTCGCCTGTCCACTAGGAATGCCTGGATAAG","aligned_b":"ATTGTCCTGTCNNT-G-CTGTCCACTA-GAATGCCTGGATAAG","edit_distance":5,"within_threshold":false},"family":"literal_N","fingerprint":"02001d9022156f12eebad8f7397b1e6c8dfb0a4a95dd8076877d7cca8496ed9e","group_id":"b2311745965df63177c8c711bc4c7171e3f49bf0b25e7e951aa3f18d24c189d6","id":"ALIGN-0003188","index":3188,"input":{"a":"ATGGCCTGTCNNTCGCCTGTCCACTAGGAATGCCTGGATAAG","b":"ATTGTCCTGTCNNTGCTGTCCACTAGAATGCCTGGATAAG","source_sequence":"ATGGCCTGTCNNTCGCCTGTCCACTAGGAATGCCTGGATAAG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATTCGGGTTCGG--GGGGGGGGGGGGGCTAGACGCAG","aligned_b":"ATTC-GGTTCGGCTGGGGGGGGGGAGGCTAGACGCAG","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"191957eabe7f40d9c5e1eede8999744f560e4616311b5517de9a4c460b930f0a","group_id":"f92b25b9400ddfe26bec4eda079a8466acadaaaa0d9c69a8bb1bdbf162db5838","id":"ALIGN-0003205","index":3205,"input":{"a":"ATTCGGGTTCGGGGGGGGGGGGGGGCTAGACGCAG","b":"ATTCGGTTCGGCTGGGGGGGGGGAGGCTAGACGCAG","source_sequence":"ATTCGGGTTCGGGGGGGGGGGGGGGCTAGACGCAG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"T-GGACCTACGNNGATTCCTACATATCACACGACTCCCCATCACGGG","aligned_b":"TGGGACCTACGNNGATTCCTACATGTC-CACG-CTCCCCACCACGGG","edit_distance":5,"within_threshold":true},"family":"literal_N","fingerprint":"61851c640a426e4e095389570c0892f4474f10c600e8961fc981da9a15712ca4","group_id":"4162fac98084761bf227ea452883c00e04cd4b96197230bbae91481c1be25f03","id":"ALIGN-0003208","index":3208,"input":{"a":"TGGACCTACGNNGATTCCTACATATCACACGACTCCCCATCACGGG","b":"TGGGACCTACGNNGATTCCTACATGTCCACGCTCCCCACCACGGG","source_sequence":"TGGACCTACGNNGATTCCTACATATCACACGACTCCCCATCACGGG","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTAGACGCCACTGGCGGCGGGGATGT-TTC-","aligned_b":"-G-AAACATCCCCGCCGCCAGTGGCGTCTACT","edit_distance":16,"within_threshold":false},"family":"reverse_complement","fingerprint":"b3e8ceead4f3abf38a6cf528c2ca83d623a8f6a3ec2891150996515386f94aad","group_id":"1886b9e7ef4f3f1ee17e4be88579991afff368456bdf433adfc20c85610a5945","id":"ALIGN-0003229","index":3229,"input":{"a":"AGTAGACGCCACTGGCGGCGGGGATGTTTC","b":"GAAACATCCCCGCCGCCAGTGGCGTCTACT","source_sequence":"AGTAGACGCCACTGGCGGCGGGGATGTTTC","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGAGGGGAAAGACCACACTAGGAGGACTCGAGATGTTCCTGAGCGT","aligned_b":"GAAGGGGAAGGACCACACTAGGAGGACTCGAGATGTTCCTGAGCGT","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"daa21a7bc7ea682345e5f634c98db028b98114ee8e3cfe08d1e452b53051f829","group_id":"2f044919968d176106bb33adc1adb8e44aa7bfb4f92c72aa43b1772419bf56c9","id":"ALIGN-0003232","index":3232,"input":{"a":"GGAGGGGAAAGACCACACTAGGAGGACTCGAGATGTTCCTGAGCGT","b":"GAAGGGGAAGGACCACACTAGGAGGACTCGAGATGTTCCTGAGCGT","source_sequence":"GGAGGGGAAAGACCACACTAGGAGGACTCGAGATGTTCCTGAGCGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CGTCTGCCCGAAAGTCCAATTGAGACGTCTAACTTATCCTCGT","aligned_b":"CGTCTGCCCGAAAGGCCAATTGAGACGTCTAACTTATCCTCGT","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"06ea9155260e23ebc41506ac2b6aaf80929809a693913528e68a97ebbaf8c294","group_id":"018075532bba74266b69a8f581ee1e51efe83832dc866dbd81e9cd12d0be696f","id":"ALIGN-0003327","index":3327,"input":{"a":"CGTCTGCCCGAAAGTCCAATTGAGACGTCTAACTTATCCTCGT","b":"CGTCTGCCCGAAAGGCCAATTGAGACGTCTAACTTATCCTCGT","source_sequence":"CGTCTGCCCGAAAGTCCAATTGAGACGTCTAACTTATCCTCGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CACTACGTATTA-CGGGAGGGAGCTAGCCTCTCCA-TGTCCG","aligned_b":"CACTACGTATTATCGGGAGGGAGCTAGCCTCTCCATTGTCCG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"e1e7b2bdc47cd95d6526992440858e69f0f6e801832742b4c66444f534b2d9bc","group_id":"6a57fde97cd1f75ff37d254b355f4398f88ffdd5b9a0f6250f82170e244944c9","id":"ALIGN-0003337","index":3337,"input":{"a":"CACTACGTATTACGGGAGGGAGCTAGCCTCTCCATGTCCG","b":"CACTACGTATTATCGGGAGGGAGCTAGCCTCTCCATTGTCCG","source_sequence":"CACTACGTATTACGGGAGGGAGCTAGCCTCTCCATGTCCG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-CATT-CGGGGCTGCTGCTGCTGCTGCTGAGGTGAGTA","aligned_b":"CCATTCCGGGGCTGCTGCTGCTGCTGCTGAGGTGAGTA","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"5ac2a80feaa967c6d2fc2fab20529f98e507bacbb6da685cd2fb731cebd891de","group_id":"03279733af2b36466832d8e6142999c541a6a5672e89b83c222762bf81bcd970","id":"ALIGN-0003346","index":3346,"input":{"a":"CATTCGGGGCTGCTGCTGCTGCTGCTGAGGTGAGTA","b":"CCATTCCGGGGCTGCTGCTGCTGCTGCTGAGGTGAGTA","source_sequence":"CATTCGGGGCTGCTGCTGCTGCTGCTGAGGTGAGTA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"---AT--TATTCA-CGCCTCG-GCTCGAGGGGGTTAAAACTATAGG","aligned_b":"CCTATAGTTTTAACCCCCTCGAGC-CGA-GGCG-T-GAA-TA-A-T","edit_distance":20,"within_threshold":false},"family":"reverse_complement","fingerprint":"1909121a10d34f9625f170779676ec4fe0892ee6abe54dba28e864e8c199356d","group_id":"7163e9d1ceeb3b0b054573db3f3c7f1f6e303c9977bd89416209873c290e7595","id":"ALIGN-0003379","index":3379,"input":{"a":"ATTATTCACGCCTCGGCTCGAGGGGGTTAAAACTATAGG","b":"CCTATAGTTTTAACCCCCTCGAGCCGAGGCGTGAATAAT","source_sequence":"ATTATTCACGCCTCGGCTCGAGGGGGTTAAAACTATAGG","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTGTGTAATANNCCCTTCGTCCACC","aligned_b":"TTGTGT-ATANNCCCTTCGTCCACC","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"57b9c48f53fdf6327efb1bdc7aef61284e2fca6648c2e870062ff5ea8ed57bc0","group_id":"878820295f6807bbad93dcf4845ae96aceccc2d63ce5410510e5c14aac4afa29","id":"ALIGN-0003383","index":3383,"input":{"a":"TTGTGTAATANNCCCTTCGTCCACC","b":"TTGTGTATANNCCCTTCGTCCACC","source_sequence":"TTGTGTAATANNCCCTTCGTCCACC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGGGAAACACGGGGGGGGGGGGCATCGTCATG","aligned_b":"TGGGAAACA-GGGGGGGGGGGGCATCGTCATG","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"602b5d5ee161115582ca7919ceb2f4ae52cda8f3bb7f4867eebdd722defb11ce","group_id":"55c72549dda18d973b88491d181b5627b21eaafa3fe653a6802e61910145bf7b","id":"ALIGN-0003390","index":3390,"input":{"a":"TGGGAAACACGGGGGGGGGGGGCATCGTCATG","b":"TGGGAAACAGGGGGGGGGGGGCATCGTCATG","source_sequence":"TGGGAAACACGGGGGGGGGGGGCATCGTCATG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-CGGCGTCATTCCTCCTCCTCCTCCCAGGCACAA","aligned_b":"CCGGCGTCATTCCTCCTCCTACTCCCACGGAC-A","edit_distance":5,"within_threshold":true},"family":"tandem_repeat","fingerprint":"7212bac00be4b1e72987aa47795945fdca335b8879ee4673ddc7793ddf205a8c","group_id":"94b718f9c4663fa025677bc589d560c980ed6b65be2628497365a41b1ef7dd21","id":"ALIGN-0003391","index":3391,"input":{"a":"CGGCGTCATTCCTCCTCCTCCTCCCAGGCACAA","b":"CCGGCGTCATTCCTCCTCCTACTCCCACGGACA","source_sequence":"CGGCGTCATTCCTCCTCCTCCTCCCAGGCACAA","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGAAATCGATTT-TTTTTTTTGGCAATCTA","aligned_b":"CGGAAATCGATTTGTTTTTTTTGGCAATCTA","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"01eb0ebca7c5981a9f1767311e3e6ccc52a2ab5a8abc8a0bbe2bf659a7ced951","group_id":"de76b25ba68eb3266204f60190119e015bbd20a1dba42522f0e2295009045f2e","id":"ALIGN-0003400","index":3400,"input":{"a":"CGGAAATCGATTTTTTTTTTTGGCAATCTA","b":"CGGAAATCGATTTGTTTTTTTTGGCAATCTA","source_sequence":"CGGAAATCGATTTTTTTTTTTGGCAATCTA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGAGCTGGGACCCCCCCC-CCCCATATGGTAGC","aligned_b":"CGAGCTGGGACCCCCCCCGCCCCATATGGTAGC","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"11a76e0a7c53650bc5bad0bec2a5c24d85e88535a3b73fe3e28c894974197a4f","group_id":"f3275caf2f1e5a1b79cc2371ed38468a985c89f7986c3eb9d72c8de4de392ed6","id":"ALIGN-0003430","index":3430,"input":{"a":"CGAGCTGGGACCCCCCCCCCCCATATGGTAGC","b":"CGAGCTGGGACCCCCCCCGCCCCATATGGTAGC","source_sequence":"CGAGCTGGGACCCCCCCCCCCCATATGGTAGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAG-TTTGC-TCNNAAGA-CAGTGAGT","aligned_b":"TAGTTTTGCATCNNAAGACCAGTGAGT","edit_distance":3,"within_threshold":false},"family":"literal_N","fingerprint":"ebbe517e1dc7c73f9ec899c46f9f855769abb79d6b275f7d2abf112b9e927db1","group_id":"c9cb744558fb0d379c891ad988f5a8b270d84feaab358f9bf43d004ce4148e63","id":"ALIGN-0003448","index":3448,"input":{"a":"TAGTTTGCTCNNAAGACAGTGAGT","b":"TAGTTTTGCATCNNAAGACCAGTGAGT","source_sequence":"TAGTTTGCTCNNAAGACAGTGAGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTTAACGGGGCGGCGGCGGCGGCAGCATTCAG","aligned_b":"AGTTAACGGGGCGGCGGCGGCGGCA-CATTCAG","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"3a2d41eda47d4e24433f6113b0cb5e8bd99bad4bac1841ffe090ca4b454f5650","group_id":"b60e7f65e18125b38aff5337a9f999c3a9ccef9c14f199bb4f3ce89761d36a3b","id":"ALIGN-0003456","index":3456,"input":{"a":"AGTTAACGGGGCGGCGGCGGCGGCAGCATTCAG","b":"AGTTAACGGGGCGGCGGCGGCGGCACATTCAG","source_sequence":"AGTTAACGGGGCGGCGGCGGCGGCAGCATTCAG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCACACTTAGTGCCACCTGATGGAGAACATT","aligned_b":"GCACACTTAGTGCCACCTGATGGAGAACATT","edit_distance":0,"within_threshold":true},"family":"clustered_indels","fingerprint":"0e6f2940cb5d1950a9590a742f98a5c351342d31c05e826bae01f3368ec4a46f","group_id":"0753440b47197ba9a0a26fb464a54804ffdecd034243c07dedbcaba5f9f43439","id":"ALIGN-0003457","index":3457,"input":{"a":"GCACACTTAGTGCCACCTGATGGAGAACATT","b":"GCACACTTAGTGCCACCTGATGGAGAACATT","source_sequence":"GCACACTTAGTGCCACCTGATGGAGAACATT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTTACCTGGNNCGCCGTGCACGAGATCCTTTCCCGAAAATATTGCA","aligned_b":"GTTTACCTGGNNCG-CGTGCACGAGATCCTTTCCCGAAAATATTGCA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"7aff8eecc2337c4dbd286edf82ee940f7a45d2a8218ce645abbd95c1367ef868","group_id":"9fc7ddebda44a31d4cf5f6390bf833f5a6c70388b410203f9f00370766a6e81c","id":"ALIGN-0003458","index":3458,"input":{"a":"GTTTACCTGGNNCGCCGTGCACGAGATCCTTTCCCGAAAATATTGCA","b":"GTTTACCTGGNNCGCGTGCACGAGATCCTTTCCCGAAAATATTGCA","source_sequence":"GTTTACCTGGNNCGCCGTGCACGAGATCCTTTCCCGAAAATATTGCA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"-GT-G--C-T-CTGGCT-AATGGTGTTGAGCCTGGAAGGGCCAGG","aligned_b":"CCTGGCCCTTCCAGGCTCAACACCATT-AGCC----AGAG-CA-C","edit_distance":23,"within_threshold":true},"family":"reverse_complement","fingerprint":"fdd31bc333099765ac92fe428123ab7c9d587df47e4833c23b8371db9ee48f51","group_id":"778d0ecd9c868b73a0528d2cea48e3c4c121a33464e4385665d8fc58f19e1e91","id":"ALIGN-0003489","index":3489,"input":{"a":"GTGCTCTGGCTAATGGTGTTGAGCCTGGAAGGGCCAGG","b":"CCTGGCCCTTCCAGGCTCAACACCATTAGCCAGAGCAC","source_sequence":"GTGCTCTGGCTAATGGTGTTGAGCCTGGAAGGGCCAGG","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-C-T-AGCCGCTTGCTTTGGCAGCCTGCC--CGTTTCCTTCTTAAGT","aligned_b":"ACTTAAGAAGGAAAC--GGGCAGGCTGCCAAAGCAAGCGGC-T-AG-","edit_distance":25,"within_threshold":true},"family":"reverse_complement","fingerprint":"22f859ee95b6a5ad969909fb1d90c3272ad5676570cfd1c52352a558e327fc40","group_id":"ddbeb33b2e6ce7c236381938a1a9bfe63dae6c223e8dad35e2dada6c37ed70ef","id":"ALIGN-0003534","index":3534,"input":{"a":"CTAGCCGCTTGCTTTGGCAGCCTGCCCGTTTCCTTCTTAAGT","b":"ACTTAAGAAGGAAACGGGCAGGCTGCCAAAGCAAGCGGCTAG","source_sequence":"CTAGCCGCTTGCTTTGGCAGCCTGCCCGTTTCCTTCTTAAGT","threshold":26},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCA-TCGACCCCCCCCCCCCTGGGTAATG","aligned_b":"CTCACTCGACCCCCCGCCCCCTGGGTAAT-","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"864f0ea6da2276de66b00bf4b8129573d6552e89a42b6656e218c7e8f80930a1","group_id":"528faae5ec0443e151df66c556dff822d9676bb9c24456e4e2c9e53a1343c5ec","id":"ALIGN-0003540","index":3540,"input":{"a":"CTCATCGACCCCCCCCCCCCTGGGTAATG","b":"CTCACTCGACCCCCCGCCCCCTGGGTAAT","source_sequence":"CTCATCGACCCCCCCCCCCCTGGGTAATG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACATCAGCATACCAGTTG-GTATGCCACTCACAA-TCAGA-GCTAAAGA","aligned_b":"TCTTTAGC-T-CTGATTGTGAGTGGCA-TACCAACTGGTATGCTGATGT","edit_distance":23,"within_threshold":true},"family":"reverse_complement","fingerprint":"618a1427c2f53ebdeed49fc0e71ee1f75da5480c22940dd26a5a3c5b1bed21bb","group_id":"d66b6edf46f849b65b062da82e88e3f754c31e72a963fc24e57b278209cd2c4b","id":"ALIGN-0003549","index":3549,"input":{"a":"ACATCAGCATACCAGTTGGTATGCCACTCACAATCAGAGCTAAAGA","b":"TCTTTAGCTCTGATTGTGAGTGGCATACCAACTGGTATGCTGATGT","source_sequence":"ACATCAGCATACCAGTTGGTATGCCACTCACAATCAGAGCTAAAGA","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGGTCTTCAAAA-AAAAAA-AAATGCGTGACCG","aligned_b":"GCGG-CTTCAAAATAAAAAATAAATGCGTGACC-","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"942f5d00aeade85dd669f529d22ac200850432cb06536d1d771f028ccf72ed25","group_id":"2f9c492b776ec815b7a18cfcb0425c9c96c3e49de477a3569bdb1d28866fa7b3","id":"ALIGN-0003570","index":3570,"input":{"a":"GCGGTCTTCAAAAAAAAAAAAATGCGTGACCG","b":"GCGGCTTCAAAATAAAAAATAAATGCGTGACC","source_sequence":"GCGGTCTTCAAAAAAAAAAAAATGCGTGACCG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAACTAGGACCTGGCCATATCTAGACAGGGG","aligned_b":"GAACTAGGACC-GGCCATATCTAGACAGGGG","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"bc381334ff1bd96b0d0e4e1d639319f0679990e1211d7e90ecdc16b204300dbc","group_id":"e04b465fc6bc4e99e83a4c2d60a6ed698a5b686569b29ac031d65b7f6e91ac5b","id":"ALIGN-0003577","index":3577,"input":{"a":"GAACTAGGACCTGGCCATATCTAGACAGGGG","b":"GAACTAGGACCGGCCATATCTAGACAGGGG","source_sequence":"GAACTAGGACCTGGCCATATCTAGACAGGGG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"GCTAACGGGACCCCCCCCCCGAATCCTGCG","aligned_b":"CCTAACGCGA-TCCCCCCCCGAATCCTGCG","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"95ae2bad45486b4afc72cc9b985102454347e1886580776d1250e661b36afbfe","group_id":"1e07aefd33d86745ca37804dcf5ce16580d87dd785c2fd661c0675e362e1f316","id":"ALIGN-0003610","index":3610,"input":{"a":"GCTAACGGGACCCCCCCCCCGAATCCTGCG","b":"CCTAACGCGATCCCCCCCCGAATCCTGCG","source_sequence":"GCTAACGGGACCCCCCCCCCGAATCCTGCG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCCCAGTCGGCGGCACAC-ATCCG","aligned_b":"CG-GATGTGTGCCGCCGACTGGGCT","edit_distance":15,"within_threshold":true},"family":"reverse_complement","fingerprint":"86b678a60962d8573c89d1cc8d79e7ac8bcff03f038a00b609bc094a82e590f2","group_id":"6163ea13a789ac8d6a75f3e66fad0db36c7cd44ad87a815491d89c659c57d73c","id":"ALIGN-0003614","index":3614,"input":{"a":"AGCCCAGTCGGCGGCACACATCCG","b":"CGGATGTGTGCCGCCGACTGGGCT","source_sequence":"AGCCCAGTCGGCGGCACACATCCG","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AATCGAGTGTCTTCTTCTTCTAGCGAAGTA","aligned_b":"AATCGAG-GTCTTCTTC-TCTAGCGAAGTA","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"b991e114728f3151c11823674045f582ef864d8702a3a7d35c4d40f78d8194a5","group_id":"eb2d4249bcb3ac3c7e64f84fbefc938919b47c770440deb321e91df925cdcd30","id":"ALIGN-0003626","index":3626,"input":{"a":"AATCGAGTGTCTTCTTCTTCTAGCGAAGTA","b":"AATCGAGGTCTTCTTCTCTAGCGAAGTA","source_sequence":"AATCGAGTGTCTTCTTCTTCTAGCGAAGTA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-AACAGTGGTTCCGTAACAGAGCTTAGAGAATGTC-AGA","aligned_b":"GAACAGTGGTTCCGTAACAGAGCTTAGAG-ATGTCGAGA","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"88079389fab97499fec8ed4e4ad277bc8de4770aa2f430fcceb1ba2756ff781a","group_id":"ef1d8f491b194f6a8531bb90836ecb6f495fdd5ce30b35d5e093b42145cc1f9e","id":"ALIGN-0003627","index":3627,"input":{"a":"AACAGTGGTTCCGTAACAGAGCTTAGAGAATGTCAGA","b":"GAACAGTGGTTCCGTAACAGAGCTTAGAGATGTCGAGA","source_sequence":"AACAGTGGTTCCGTAACAGAGCTTAGAGAATGTCAGA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTAGCTAAGGCTGTGCGCGACCTATGTTTGC","aligned_b":"GCAAACATAGGTCGCGCACAGCCTTAGCTACG","edit_distance":18,"within_threshold":false},"family":"reverse_complement","fingerprint":"581f50f12b170087cb66d9b676def129ea377282c209a213a0357796ac6c92bc","group_id":"95109875cbcf70bd37a458a416607b7528ebeb6430de117abd13aa5a630d2351","id":"ALIGN-0003629","index":3629,"input":{"a":"CGTAGCTAAGGCTGTGCGCGACCTATGTTTGC","b":"GCAAACATAGGTCGCGCACAGCCTTAGCTACG","source_sequence":"CGTAGCTAAGGCTGTGCGCGACCTATGTTTGC","threshold":17},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGCAGTCCCGNNTGATACTCGTTCCGAATACACAGGC","aligned_b":"GGCAGTCCCGNNTGATACTCGTTCCGAATACACAGGC","edit_distance":0,"within_threshold":true},"family":"literal_N","fingerprint":"f3eecf1dd7e48c289bc22492f8e94428b06fac693ae9ab6b229b3183beb73134","group_id":"eea03c8d8a86963c98f38df5b5c8c3b48799933fa31de52f1ebd77d80060f8cb","id":"ALIGN-0003633","index":3633,"input":{"a":"GGCAGTCCCGNNTGATACTCGTTCCGAATACACAGGC","b":"GGCAGTCCCGNNTGATACTCGTTCCGAATACACAGGC","source_sequence":"GGCAGTCCCGNNTGATACTCGTTCCGAATACACAGGC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCGATGACCTTTTTTTTTTTCGGAAG-G","aligned_b":"CTCGATGACCTTTTTTTTTTTCGGAAGAG","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"4db2854a1db693ca68c715e2bb56cabc23f7ec7190391bc80f3bce5cd9d8b50d","group_id":"f0a4deb7fd04e6c12d755b48f107e948a9e21a9e059c8b9bf881289041a24060","id":"ALIGN-0003660","index":3660,"input":{"a":"CTCGATGACCTTTTTTTTTTTCGGAAGG","b":"CTCGATGACCTTTTTTTTTTTCGGAAGAG","source_sequence":"CTCGATGACCTTTTTTTTTTTCGGAAGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTGGGCACTGGTGGCA-TGACACGGCCGATGG","aligned_b":"CGTGGGCACTGGTGGCACTGACACTGCCG-TGG","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"bd03b787b0817d41f73a4c765a626eaba4ecc2590a0661b9738e88aacf522b72","group_id":"f560274589150b158739a39f0b64d13c315152ae4e62bbe4a847a826d4f5ebd2","id":"ALIGN-0003662","index":3662,"input":{"a":"CGTGGGCACTGGTGGCATGACACGGCCGATGG","b":"CGTGGGCACTGGTGGCACTGACACTGCCGTGG","source_sequence":"CGTGGGCACTGGTGGCATGACACGGCCGATGG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAGGTGCAATTCTTCTTCTTCTTCTTCCGCACAATT","aligned_b":"GAGGTGCAATTCTTCTTCTTCTGCTTCCGCACAATT","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"4b588df0d2db1d3ab8709ba5f438db98a258625ad539c4144ecb8840fabd03ba","group_id":"27176a472aa979e35f2bb0a35cfa2c44541395827f41bd4eb99b1ba9a38d2b90","id":"ALIGN-0003666","index":3666,"input":{"a":"GAGGTGCAATTCTTCTTCTTCTTCTTCCGCACAATT","b":"GAGGTGCAATTCTTCTTCTTCTGCTTCCGCACAATT","source_sequence":"GAGGTGCAATTCTTCTTCTTCTTCTTCCGCACAATT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCTGTCCTACAATGTAACAGGGCCC--ATACAGTAATGTTTAG-T","aligned_b":"A-CTAAACATTACTGT-A-TGGGCCCTGTTACATTGTAGGACAGCT","edit_distance":22,"within_threshold":false},"family":"reverse_complement","fingerprint":"db284c7c7ffad24fa7ecacf05c3a4747513d804ab65b37162af539c3aa481423","group_id":"f22e7aa914599331dc833eddd44ffc4041f3dc470ed94c554b43a386da9de3be","id":"ALIGN-0003689","index":3689,"input":{"a":"AGCTGTCCTACAATGTAACAGGGCCCATACAGTAATGTTTAGT","b":"ACTAAACATTACTGTATGGGCCCTGTTACATTGTAGGACAGCT","source_sequence":"AGCTGTCCTACAATGTAACAGGGCCCATACAGTAATGTTTAGT","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCGGCTGGTANNTGCTGTACGGTGGTTTGCGACGTCG","aligned_b":"TCGGCTGNTANNTGCTGTACGGTTGTTTGCGACGTCG","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"beed411875ec3870baa46823da981995edd2f4fe3a086395041c1a90088eb928","group_id":"33090c7fc72391b3c85b877b26d71b2007a0887ab69a142f0a7c7b95f40fa62a","id":"ALIGN-0003703","index":3703,"input":{"a":"TCGGCTGGTANNTGCTGTACGGTGGTTTGCGACGTCG","b":"TCGGCTGNTANNTGCTGTACGGTTGTTTGCGACGTCG","source_sequence":"TCGGCTGGTANNTGCTGTACGGTGGTTTGCGACGTCG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGGAAA-CGCAACAACAAGAGGATT-CA","aligned_b":"CTGGAAATCGC-ACAACAAGAGGATTCCA","edit_distance":3,"within_threshold":false},"family":"tandem_repeat","fingerprint":"009a0283c634754ba0d8b529bae6a21d72e655697fc7782a1a39ff1f3ab41e6e","group_id":"9651cba5bdb0ec1074c712cdf8b2b27966e659cd86f27991df23f6de4d8d8c1f","id":"ALIGN-0003711","index":3711,"input":{"a":"CTGGAAACGCAACAACAAGAGGATTCA","b":"CTGGAAATCGCACAACAAGAGGATTCCA","source_sequence":"CTGGAAACGCAACAACAAGAGGATTCA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCCT-TGCGTCTCAGCCCTGTATTA","aligned_b":"TAATACAGGGCTGAG-ACGCAAGGA","edit_distance":15,"within_threshold":true},"family":"reverse_complement","fingerprint":"dfb83aca2f11becf594d9087afc8bf6ae331f3a306c868fbd62a9e6cb2743530","group_id":"4ca8488fc3363fde3a51ffaed9ddf405edc40f23b5d36c91ebd835651292968f","id":"ALIGN-0003729","index":3729,"input":{"a":"TCCTTGCGTCTCAGCCCTGTATTA","b":"TAATACAGGGCTGAGACGCAAGGA","source_sequence":"TCCTTGCGTCTCAGCCCTGTATTA","threshold":16},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACACTATACTNNTGGGATCATGAATGTCCATTCTATCCACCAATGAAT","aligned_b":"ACACTATACTNNTGGGATCATGAATGT-CATTCTATCCACCAATGAAT","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"54367d22f5ba5067f8f8ac43c1a641a6be5ec5eee78add5fd2622afaaa13f30a","group_id":"398a928f20c9d5967366c9a9da0e727811e05019c475b189d5fde7ef0bff65e1","id":"ALIGN-0003738","index":3738,"input":{"a":"ACACTATACTNNTGGGATCATGAATGTCCATTCTATCCACCAATGAAT","b":"ACACTATACTNNTGGGATCATGAATGTCATTCTATCCACCAATGAAT","source_sequence":"ACACTATACTNNTGGGATCATGAATGTCCATTCTATCCACCAATGAAT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTCTCTCCATATACGTCATGTAGATCCTATCT","aligned_b":"GTCTCTCCATATACGT-ATGTAGATCCTATCT","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"a550422351d99b88a4421c073e9964eb5cc0cf8d2b4f6dc0d7ab540d2752affb","group_id":"5e4ddab93c831980af28365037cf9c69bcc8c0318a13885509459625ff8ffe9f","id":"ALIGN-0003752","index":3752,"input":{"a":"GTCTCTCCATATACGTCATGTAGATCCTATCT","b":"GTCTCTCCATATACGTATGTAGATCCTATCT","source_sequence":"GTCTCTCCATATACGTCATGTAGATCCTATCT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATTTACTGTNNCGTTGAATTGTGGCATTTAGATTTTAATTCTGAGGTG","aligned_b":"GATTTACTGTNNCGTTGAA-TGTGGCATTTAG-TTTTAATTCTGAGGTG","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"93720bbf06b56a1251d778cdb942d678822ccd6d4ca58ae6d38746e42861b8a9","group_id":"838950331e0a8b32efb358be75ca1300a86e602eef48cdaabc3490fe8d1395bc","id":"ALIGN-0003753","index":3753,"input":{"a":"GATTTACTGTNNCGTTGAATTGTGGCATTTAGATTTTAATTCTGAGGTG","b":"GATTTACTGTNNCGTTGAATGTGGCATTTAGTTTTAATTCTGAGGTG","source_sequence":"GATTTACTGTNNCGTTGAATTGTGGCATTTAGATTTTAATTCTGAGGTG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GT-AAATGAG-CCCCCCCCCCCCCAGCTGCGCT-A","aligned_b":"GTAAAATGAGCCCCCCCCCCCCCCGGCTGCGCTAA","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"f02d136c802ac020513b182cad5613ce42617e13c815d94aa13cc8864b9823bd","group_id":"ad306bfba63634d6fc3e95b38ef7fe4faa16b1b39178d1cf1282c57dc694b122","id":"ALIGN-0003760","index":3760,"input":{"a":"GTAAATGAGCCCCCCCCCCCCCAGCTGCGCTA","b":"GTAAAATGAGCCCCCCCCCCCCCCGGCTGCGCTAA","source_sequence":"GTAAATGAGCCCCCCCCCCCCCAGCTGCGCTA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGAAAGTAC-T--TAAACGTTTATTATGTAGATTCG","aligned_b":"CGAATCTACATAATAAACGTTTA--A-GTACTTTCT","edit_distance":12,"within_threshold":true},"family":"reverse_complement","fingerprint":"06a6fde2dcf5d19bb6cd9d2fac836c0d1450a5f813b0235f2447bb8b5358ef1c","group_id":"71168baf126599b38782f959b9aa913ba8f9e74d97a35bd91760a6baf2fd30b8","id":"ALIGN-0003764","index":3764,"input":{"a":"AGAAAGTACTTAAACGTTTATTATGTAGATTCG","b":"CGAATCTACATAATAAACGTTTAAGTACTTTCT","source_sequence":"AGAAAGTACTTAAACGTTTATTATGTAGATTCG","threshold":12},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGTCTCAGANNGGTGATGGGAAGA","aligned_b":"AGGTCTCAGANNGGTGATTGGAAGA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"a0037a76c380747239047f30cbc64bf58103e69a995dba1eb545b72f3776fcea","group_id":"d04dd17d73aab81845769e78089c8d762709dbf4fea13d34881bde5a2a257eca","id":"ALIGN-0003773","index":3773,"input":{"a":"AGGTCTCAGANNGGTGATGGGAAGA","b":"AGGTCTCAGANNGGTGATTGGAAGA","source_sequence":"AGGTCTCAGANNGGTGATGGGAAGA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTGT-TCCCGTTTTTTTTTTTTTTTTACGCTCTTGC","aligned_b":"GGTGTGTCCCG-TTTTTTTTTTTTTTTACGCTCTTGC","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"4f8bb0a6a9eff99b548513d276b369fcbe235d3020fe366c99dd1fe1e4a61b50","group_id":"4df54f49691cab429bf797c902786c79a72c5817bb654783f3f0044567918bf9","id":"ALIGN-0003785","index":3785,"input":{"a":"GGTGTTCCCGTTTTTTTTTTTTTTTTACGCTCTTGC","b":"GGTGTGTCCCGTTTTTTTTTTTTTTTACGCTCTTGC","source_sequence":"GGTGTTCCCGTTTTTTTTTTTTTTTTACGCTCTTGC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGGAAATATNNACCAAAGTTCGTT-GGCTGC","aligned_b":"CAGG--ATATNNACCAAA-CTCGTTAGGCTGC","edit_distance":5,"within_threshold":true},"family":"literal_N","fingerprint":"711b22607015ce92414bedfaa8a6549a94cd89a54e12561bffe9ff99c54ae9a6","group_id":"1d64a45123214caf87662500711f6e7af25cc29ed7fd9df5eda7ed7643d532c2","id":"ALIGN-0003788","index":3788,"input":{"a":"CAGGAAATATNNACCAAAGTTCGTTGGCTGC","b":"CAGGATATNNACCAAACTCGTTAGGCTGC","source_sequence":"CAGGAAATATNNACCAAAGTTCGTTGGCTGC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGTACTTGGTCTA-TGTCGGACAATA-ACC---TTCT-","aligned_b":"-AG-A--AGGT-TATTGTCCGAC-ATAGACCAAGTACTG","edit_distance":15,"within_threshold":true},"family":"reverse_complement","fingerprint":"dbf2cb0fe27d8037abba2d78cf27b70dc522cba91e6dc914805554e2c297d2ab","group_id":"8fd405d1ad2905483b86cb39a25abb97373de9edb79af5a3ba600b920fe36ac7","id":"ALIGN-0003789","index":3789,"input":{"a":"CAGTACTTGGTCTATGTCGGACAATAACCTTCT","b":"AGAAGGTTATTGTCCGACATAGACCAAGTACTG","source_sequence":"CAGTACTTGGTCTATGTCGGACAATAACCTTCT","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGATCTTTGTTTTTTTTTTTTTTTCGGCGAAAGT","aligned_b":"-GATCTTTGTTTTTTTTTTTTTTTCGCCGAAAGT","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"3627c06e49e778ce93ec59e11667766fb4e5d23892677affb48545aae3e564ba","group_id":"e0714cb58717eca011e971f9afaef2d9a1ebe0e7bb0e2c4f9099c697fafa8d72","id":"ALIGN-0003790","index":3790,"input":{"a":"AGATCTTTGTTTTTTTTTTTTTTTCGGCGAAAGT","b":"GATCTTTGTTTTTTTTTTTTTTTCGCCGAAAGT","source_sequence":"AGATCTTTGTTTTTTTTTTTTTTTCGGCGAAAGT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGCGG-GAATG-TTTTTTTTTTTGGACTCCA","aligned_b":"TGCGGTGCATGATTTTTATTTTTGGACTCCA","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"9b6c2a445ee4241121653c9c430d9690dce3d4451497523b80a008946712d46c","group_id":"d8c0ba0fa40489abdbb7373d4524d2d25ce5f36655300e30f1f0d9ff44e9a6a7","id":"ALIGN-0003795","index":3795,"input":{"a":"TGCGGGAATGTTTTTTTTTTTGGACTCCA","b":"TGCGGTGCATGATTTTTATTTTTGGACTCCA","source_sequence":"TGCGGGAATGTTTTTTTTTTTGGACTCCA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATGTACCGGACTG-CCTATATCAGCATGGACCGTATCAAACAGTGG","aligned_b":"ATGTACC-GACTGCCCTATATCAGCATGTA-CGTACCAAACAGTGG","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"5a3e85fb3b08ebec8c2193aa710d71e6a8764fcef16c8459df35f5fd57d6891f","group_id":"57be23118c3554f8a089d0549dfe755fbc9c7ccfeab1a16342ecc4aa933d3cf7","id":"ALIGN-0003802","index":3802,"input":{"a":"ATGTACCGGACTGCCTATATCAGCATGGACCGTATCAAACAGTGG","b":"ATGTACCGACTGCCCTATATCAGCATGTACGTACCAAACAGTGG","source_sequence":"ATGTACCGGACTGCCTATATCAGCATGGACCGTATCAAACAGTGG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-CCAGCGTTAGCCCCCCCCCTTTAAATTC","aligned_b":"CCCTGCG-TAGCCCCCCCCCTTTAAATTC","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"e03dc6b73b19c0d4e1e32669ce041bda32006d7882448d73280cf9a509645e8a","group_id":"19cec3e993e7a85fe8e6e734e89f1c5ea3fcc1cef7b36d5f0672fe05a5a20bf8","id":"ALIGN-0003805","index":3805,"input":{"a":"CCAGCGTTAGCCCCCCCCCTTTAAATTC","b":"CCCTGCGTAGCCCCCCCCCTTTAAATTC","source_sequence":"CCAGCGTTAGCCCCCCCCCTTTAAATTC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGGCGCTTTNNCGGCACCTATGCAA-TTTGTTCCACC","aligned_b":"ACGGCGCTTTNNCGGCACGTATGCAAGTTTGTTCCACC","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"fb85cf470742057d80f61cd09c596f907aa4a83dd5f67dc35c44a77ae60053bb","group_id":"d0e707e9c1dcee18cbc790d010bd05daa81cef29e4c08783cb5779d5cf8702cc","id":"ALIGN-0003813","index":3813,"input":{"a":"ACGGCGCTTTNNCGGCACCTATGCAATTTGTTCCACC","b":"ACGGCGCTTTNNCGGCACGTATGCAAGTTTGTTCCACC","source_sequence":"ACGGCGCTTTNNCGGCACCTATGCAATTTGTTCCACC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTCT--GGGCCTGCACTGGA-CTCCCAATGA","aligned_b":"GTTCTGAGGGCCTGCACTGGACCTGCCAATGA","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"28c51df21ab31d6a72f0ba4547fd2bc901b221691b2671bd1d76414c316f2322","group_id":"db50d9355dbb3791ba2643fc4fb25b799ca8a61f4c58be6ce68e0001ae7c1f89","id":"ALIGN-0003837","index":3837,"input":{"a":"GTTCTGGGCCTGCACTGGACTCCCAATGA","b":"GTTCTGAGGGCCTGCACTGGACCTGCCAATGA","source_sequence":"GTTCTGGGCCTGCACTGGACTCCCAATGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTGACGAGGTCATCATCATCATCATCAGACATT-AGA","aligned_b":"GTGA-GAGGTCATCAT-ATCATC-TCAGACATTAAGA","edit_distance":4,"within_threshold":false},"family":"tandem_repeat","fingerprint":"9bc0646900632c193ef2b661c82c27891d0c240a2406794475e7a902420761ac","group_id":"315f523574453764d97e473f68f704d69b182ac5df9cbe29373fa09a015deb06","id":"ALIGN-0003846","index":3846,"input":{"a":"GTGACGAGGTCATCATCATCATCATCAGACATTAGA","b":"GTGAGAGGTCATCATATCATCTCAGACATTAAGA","source_sequence":"GTGACGAGGTCATCATCATCATCATCAGACATTAGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTATGGCTTA-TGCACTATTGCA-GG","aligned_b":"C-CTGCAATAGTGCA-TAAGCCATAG","edit_distance":12,"within_threshold":true},"family":"reverse_complement","fingerprint":"3f2d6df75d160585196fc51703278c40bcd879842d4aa16eec7bc55f7a3b4ec1","group_id":"6edf4a07943eed0f65779ff2275ed1daf7d9236358866a8067a6b703e46e4107","id":"ALIGN-0003849","index":3849,"input":{"a":"CTATGGCTTATGCACTATTGCAGG","b":"CCTGCAATAGTGCATAAGCCATAG","source_sequence":"CTATGGCTTATGCACTATTGCAGG","threshold":12},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATAATGGTTTT-GAGCTGGTGAGCTACAGGTGTAGGCACAACGGACTGT","aligned_b":"ATAATGGTTTTCGAGC-GGTTAGCTACAGGTGTAGGCACAACGGACTGT","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"a2b1f26488274974c41107b273e624c0f206b1a08cc5c0cd06d90c94eeefa111","group_id":"cfd389efda923c9b1cdd6d6e869756c34c18bfac7f9011c737e81302308885b7","id":"ALIGN-0003857","index":3857,"input":{"a":"ATAATGGTTTTGAGCTGGTGAGCTACAGGTGTAGGCACAACGGACTGT","b":"ATAATGGTTTTCGAGCGGTTAGCTACAGGTGTAGGCACAACGGACTGT","source_sequence":"ATAATGGTTTTGAGCTGGTGAGCTACAGGTGTAGGCACAACGGACTGT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTTAACTAGCTTCTTTCCACCAAGCTCGATGGGGGTTGA-A","aligned_b":"-TTCAACCCCCATCGAGCTTGGTGGAAAGAAGCTAGTTAACC","edit_distance":26,"within_threshold":true},"family":"reverse_complement","fingerprint":"9c6e54696bd0e0d87c295e4e20be566e9b93b90c1086c006accfee3b1a975547","group_id":"ae40fe75aa8870e0dcee77924830d9687317f9fc0e6c4fd43f3a2cfd486b9b70","id":"ALIGN-0003859","index":3859,"input":{"a":"GGTTAACTAGCTTCTTTCCACCAAGCTCGATGGGGGTTGAA","b":"TTCAACCCCCATCGAGCTTGGTGGAAAGAAGCTAGTTAACC","source_sequence":"GGTTAACTAGCTTCTTTCCACCAAGCTCGATGGGGGTTGAA","threshold":26},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GACCTCTTTGCAGA-GGCCTCTTGTCAACAGATTCCGG-C","aligned_b":"GA-CTCTTTGCAGAGGGCCTCCTGTCAACAGATTCCGGTC","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"2af7a438267058580cb165ffdf64de03090ca31e1117986ecf18b6cfe9463a54","group_id":"5ea541c3bdfbeebbeb4d7bfb8e101d6fb1a8489d01a4db562ec52ccd7f7d5c03","id":"ALIGN-0003867","index":3867,"input":{"a":"GACCTCTTTGCAGAGGCCTCTTGTCAACAGATTCCGGC","b":"GACTCTTTGCAGAGGGCCTCCTGTCAACAGATTCCGGTC","source_sequence":"GACCTCTTTGCAGAGGCCTCTTGTCAACAGATTCCGGC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"----CAC-GA--GT-GTATATCCCACCGTCCGTCATCC","aligned_b":"GGATGACGGACGGTGGGATAT-ACA-C-T-CG---T-G","edit_distance":20,"within_threshold":true},"family":"reverse_complement","fingerprint":"58dd70c45c11fa11beb5a592f239b6d6e0179fb7a2bb0a50b35fbd66075bf719","group_id":"da1eb45b250f825a7031bf5406ec47875c0fcba7ed29ad866c64f8360c2238cd","id":"ALIGN-0003869","index":3869,"input":{"a":"CACGAGTGTATATCCCACCGTCCGTCATCC","b":"GGATGACGGACGGTGGGATATACACTCGTG","source_sequence":"CACGAGTGTATATCCCACCGTCCGTCATCC","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTTTCATTAATGTAACGTGAGCTAGCT-GC-AAACTTTAGGGCCATT","aligned_b":"AATGGCCCTAAAGT-TTG-CAGCTAGCTCACGTTACATTAATGAAACG","edit_distance":24,"within_threshold":true},"family":"reverse_complement","fingerprint":"55681f4de4f918cf72e400845a920943b6c95a8ad7c778550541c05a0e6b09d2","group_id":"252c5df52bb53598186168261ed52be4b4cfda5e51ee690d8a13aaefb8e271f8","id":"ALIGN-0003884","index":3884,"input":{"a":"CGTTTCATTAATGTAACGTGAGCTAGCTGCAAACTTTAGGGCCATT","b":"AATGGCCCTAAAGTTTGCAGCTAGCTCACGTTACATTAATGAAACG","source_sequence":"CGTTTCATTAATGTAACGTGAGCTAGCTGCAAACTTTAGGGCCATT","threshold":25},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCTATAAATNNAA-AGG-AAATTTATA","aligned_b":"AGCTATAAATNNAACNGGAAAATTTATA","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"7c479417a19b3053ba8233b56de8b5b31d9ef5c0c52a2487003e89463f04375f","group_id":"68a664c70bd0fbcfc2e522b905818b31272629699ce4f76a927dc46d89806a0a","id":"ALIGN-0003903","index":3903,"input":{"a":"AGCTATAAATNNAAAGGAAATTTATA","b":"AGCTATAAATNNAACNGGAAAATTTATA","source_sequence":"AGCTATAAATNNAAAGGAAATTTATA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGCGGTAGCGT-CGTCGTCGTCGTCGTCTAATGGGTC","aligned_b":"GGCGGTAGCGTCCGTCGTCGTCGT-GTCT-ATGGGTC","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"057b5d42d970b4b3c47c9aadbe8f0533e16443cc763fbe8289f8ab5886a0da48","group_id":"c3ca115f8b6f01c3cdf00f215adfeb3f34eb3a44914204b8bdc29e2281cee1e1","id":"ALIGN-0003906","index":3906,"input":{"a":"GGCGGTAGCGTCGTCGTCGTCGTCGTCTAATGGGTC","b":"GGCGGTAGCGTCCGTCGTCGTCGTGTCTATGGGTC","source_sequence":"GGCGGTAGCGTCGTCGTCGTCGTCGTCTAATGGGTC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTCCGTCGAAGAAGAAGAAGAAGAAGAAGCGAAGGAGT","aligned_b":"AGTCCGTCGAAGAAGAAGAAGAAGATGAAGCGAAGGAGT","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"2e6727302dccfa802b72af25c5762c0005396021654626e63f8840ed1f3ae11e","group_id":"0d86b47f2ecc09461e2eff601c8bab9b0e8bf58301d42a145c74a26198284da9","id":"ALIGN-0003916","index":3916,"input":{"a":"AGTCCGTCGAAGAAGAAGAAGAAGAAGAAGCGAAGGAGT","b":"AGTCCGTCGAAGAAGAAGAAGAAGATGAAGCGAAGGAGT","source_sequence":"AGTCCGTCGAAGAAGAAGAAGAAGAAGAAGCGAAGGAGT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTATGCTAACGAGTTAACAATGGGACATGCGCGATTGCCAGTCAAAATCG","aligned_b":"GTATGCTAATGAGTT-ACAATGGGACATGCGCGATTGCCAGTCAAAATCG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"f7d05a2b14b665a4636ed9b33a3dd352f7fb2ff4276946bf202edf2f35ae7d74","group_id":"96eadbf1214f30b916d827925ae1d85cf046e778c89da9fb39d52aee588772f7","id":"ALIGN-0003922","index":3922,"input":{"a":"GTATGCTAACGAGTTAACAATGGGACATGCGCGATTGCCAGTCAAAATCG","b":"GTATGCTAATGAGTTACAATGGGACATGCGCGATTGCCAGTCAAAATCG","source_sequence":"GTATGCTAACGAGTTAACAATGGGACATGCGCGATTGCCAGTCAAAATCG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCCCAAGCACGTCGAATATCACATATGTCACGG-CTTTA","aligned_b":"TCCAAAGCACGTCGAATATCA-ATATGTCAGGGCCTTTA","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"eafa5fb96a6d1a05c704818f56f64b05d3d9a61bd0b955f2db049d04bc89c790","group_id":"68795d1574eac4033ff12c78efc5e9c249101bb381d838fed7c8ea9c49135b16","id":"ALIGN-0003927","index":3927,"input":{"a":"TCCCAAGCACGTCGAATATCACATATGTCACGGCTTTA","b":"TCCAAAGCACGTCGAATATCAATATGTCAGGGCCTTTA","source_sequence":"TCCCAAGCACGTCGAATATCACATATGTCACGGCTTTA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGTATTAGANNAAACTGCT-GTATA","aligned_b":"CTGTATTAGANNATA-TGCTCGTATA","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"9a13c4194c4afce0443c8b2bdd43c1c3d7ddab3bb3568161e2b02f99e4d95f4b","group_id":"8e808e07e6b4abcef8ab61b6af3190a8858d8217c55814062876474444d37085","id":"ALIGN-0003933","index":3933,"input":{"a":"CTGTATTAGANNAAACTGCTGTATA","b":"CTGTATTAGANNATATGCTCGTATA","source_sequence":"CTGTATTAGANNAAACTGCTGTATA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTGTCCCCGCNNGATGTTTCCCTACT","aligned_b":"GTGT-CCCGCNNGATGTTTCCCTACT","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"02da051684d35456b782789c450b7717c8553f20f18d6dcddb220284a432c2fc","group_id":"e412576f04079954db2ea12cf2b02a80f0ead0d7c18d1d8451e7422c930366c5","id":"ALIGN-0003938","index":3938,"input":{"a":"GTGTCCCCGCNNGATGTTTCCCTACT","b":"GTGTCCCGCNNGATGTTTCCCTACT","source_sequence":"GTGTCCCCGCNNGATGTTTCCCTACT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGTGTCTGTNNCGCATGGTGGTCTTAGATGCAGCG","aligned_b":"ACGTGTCTGTNNC-CATGGTGGTCTTAGATGCAGCG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"4fa67143ce6cc5f0970c0cf5ec04f7be013143023b39a3e94cbaf3537bfd2873","group_id":"fa56b2af4508be502d54bc0d9a9fc242aa5b5220d9db548a89dea832716b9dbb","id":"ALIGN-0003948","index":3948,"input":{"a":"ACGTGTCTGTNNCGCATGGTGGTCTTAGATGCAGCG","b":"ACGTGTCTGTNNCCATGGTGGTCTTAGATGCAGCG","source_sequence":"ACGTGTCTGTNNCGCATGGTGGTCTTAGATGCAGCG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTGAGCCGTCCACTTAGAGGAGGACTAAGTGCACTGTTGAGTCGTGTC","aligned_b":"AGTGAGCCCTCCACTTAGAGGAGGACTAAGTGCTCTGTTGAGTCGTGTC","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"415c82a37fa7289b142a7d8697fed6b9c46b4f6e611c19172ede444240a5b72c","group_id":"e0a18ecf30eca1666ce1d9e3e122e0377328f2b410ef43b8b9ce914ec2f9b8c7","id":"ALIGN-0003977","index":3977,"input":{"a":"AGTGAGCCGTCCACTTAGAGGAGGACTAAGTGCACTGTTGAGTCGTGTC","b":"AGTGAGCCCTCCACTTAGAGGAGGACTAAGTGCTCTGTTGAGTCGTGTC","source_sequence":"AGTGAGCCGTCCACTTAGAGGAGGACTAAGTGCACTGTTGAGTCGTGTC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACGCCCTGTTGGTATGGTTCGTATGT-TG","aligned_b":"TACGCCATGTTGGTATGGTTCGTATGTGTG","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"7f6ce06d0a3808ec035a9843cb217499e3a496e2c38e29e8ee4b59088a37e4b3","group_id":"310f39215be5f95371da30abfc15abe7f299c3fc026630d753b2b04ae0093b59","id":"ALIGN-0003982","index":3982,"input":{"a":"TACGCCCTGTTGGTATGGTTCGTATGTTG","b":"TACGCCATGTTGGTATGGTTCGTATGTGTG","source_sequence":"TACGCCCTGTTGGTATGGTTCGTATGTTG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AATGC-GCGCGCAGCAGCAGCAGCATGTGGTTTG","aligned_b":"AATGCGGCGCGCAGCAGCAGCAGCATGTGGTTTG","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"0749fc9bdc1f3f1300313997ae2d52af4df9aae448703ea97582fd7f6a3f7b2e","group_id":"333798d34ada8c85e18ea77fd5bdf36a70e2f1d38a98920d90a874042cc91bcc","id":"ALIGN-0004001","index":4001,"input":{"a":"AATGCGCGCGCAGCAGCAGCAGCATGTGGTTTG","b":"AATGCGGCGCGCAGCAGCAGCAGCATGTGGTTTG","source_sequence":"AATGCGCGCGCAGCAGCAGCAGCATGTGGTTTG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"G-ATAGTTGGGGGGGGGGGGGGGGCTTAGCCGCA","aligned_b":"GAATAGTTGGGGGGGGGGGGGGGGCTTAGCCGCA","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"aba15a797b7b752c68e2a83431712976e4ba86ef7973c64b97c7a0a4241e9d7c","group_id":"c9f82e8bbe57e442fa3c218f1f3c44b6707bf7c0789489939083dcdc45612587","id":"ALIGN-0004005","index":4005,"input":{"a":"GATAGTTGGGGGGGGGGGGGGGGCTTAGCCGCA","b":"GAATAGTTGGGGGGGGGGGGGGGGCTTAGCCGCA","source_sequence":"GATAGTTGGGGGGGGGGGGGGGGCTTAGCCGCA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGAGCGCTCCAAATC-GGCGAAGTTGGTTCAATTGCCAAATATG","aligned_b":"AGAGCGCTCCAAATCAGGCGAAGTTGGTTCAATT-CTAAATTTG","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"2dcf240d8ba3d061e2eb551c935f13fbe317d501bc67473666f9c96b25ab7393","group_id":"3dc48aef7d07fcfac053f4e5ab2ad947dad3dd946c57402400a527f72ebbdd52","id":"ALIGN-0004027","index":4027,"input":{"a":"AGAGCGCTCCAAATCGGCGAAGTTGGTTCAATTGCCAAATATG","b":"AGAGCGCTCCAAATCAGGCGAAGTTGGTTCAATTCTAAATTTG","source_sequence":"AGAGCGCTCCAAATCGGCGAAGTTGGTTCAATTGCCAAATATG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCGTTTCTTACACTCTACCCGAAATTTCGAG--GAATG-ACGTAATCT","aligned_b":"AGATTACGT-CA-T-TCCTCGAAATTTCGGGTAGAGTGTAAGAAACGA","edit_distance":20,"within_threshold":true},"family":"reverse_complement","fingerprint":"439d45863142dc68bc6361a170d0229e9513382482bdb57de062680cd6e164a5","group_id":"8bc3dd8b94ed37d194e98a27186c049122f0030220f38009ec916a2a2eef8657","id":"ALIGN-0004034","index":4034,"input":{"a":"TCGTTTCTTACACTCTACCCGAAATTTCGAGGAATGACGTAATCT","b":"AGATTACGTCATTCCTCGAAATTTCGGGTAGAGTGTAAGAAACGA","source_sequence":"TCGTTTCTTACACTCTACCCGAAATTTCGAGGAATGACGTAATCT","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGCAAGAGCC-GCCGCCGCC-GCCGCCGCACCGTGCG","aligned_b":"ACGCAAGAGCCGGCCGCCGCCAGCCGCCGC-CCGTGTG","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"e53ab14b1b0dcc9a71a9c12c688f432f098456d4df4005eddfbc4bd4aba51b03","group_id":"6a7f0ac9638cffdd49857e7094d5c73e55cd58bf47afb5d2375702c8c02ce3fc","id":"ALIGN-0004036","index":4036,"input":{"a":"ACGCAAGAGCCGCCGCCGCCGCCGCCGCACCGTGCG","b":"ACGCAAGAGCCGGCCGCCGCCAGCCGCCGCCCGTGTG","source_sequence":"ACGCAAGAGCCGCCGCCGCCGCCGCCGCACCGTGCG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CC-CGAATACTCCCCCCCCCCCCCCGAT-CGTTTTC","aligned_b":"CCGCGAGTACTCCCCCCCCCCCCCCGATACGTTTTC","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"b85c646b16e5b14fe873f2db4c9c259f37e86155779199e50c76dda36316f919","group_id":"fb2d56bb12d5e9d16d575027678df4d56e41b8f4525f169942c406b4d46fc471","id":"ALIGN-0004050","index":4050,"input":{"a":"CCCGAATACTCCCCCCCCCCCCCCGATCGTTTTC","b":"CCGCGAGTACTCCCCCCCCCCCCCCGATACGTTTTC","source_sequence":"CCCGAATACTCCCCCCCCCCCCCCGATCGTTTTC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGCAGTC-TANNGAAATATCTACTCAGTAACGTT-TATCTACG","aligned_b":"CAGCAGTCTTANNGAAATAT-TACTCAGTAACGTTGTATCTACG","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"4224e608d1a971e3e635b08040ed0ab7a77d7b5eb949f2dacc1ff4851f674879","group_id":"4717e4e30d226ec3508cdb3933961394896c4fe6bbdb2d2a5a2ef6a473a3ac5c","id":"ALIGN-0004053","index":4053,"input":{"a":"CAGCAGTCTANNGAAATATCTACTCAGTAACGTTTATCTACG","b":"CAGCAGTCTTANNGAAATATTACTCAGTAACGTTGTATCTACG","source_sequence":"CAGCAGTCTANNGAAATATCTACTCAGTAACGTTTATCTACG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATGGTAGCG-T-ATTGTAGTGATCTCT-TC-TA","aligned_b":"--TAGAAGAGATCACTACAAT-A-CGCTACCATG","edit_distance":18,"within_threshold":true},"family":"reverse_complement","fingerprint":"d1d6f28fc6fc8af266ce19d1cffafea96d936d4f00e4f1b50af2ecb6120fa714","group_id":"ca41237f40f84d0d874a49b40f61a8ec287ebacd5472e2752338bceddc0f10ec","id":"ALIGN-0004079","index":4079,"input":{"a":"CATGGTAGCGTATTGTAGTGATCTCTTCTA","b":"TAGAAGAGATCACTACAATACGCTACCATG","source_sequence":"CATGGTAGCGTATTGTAGTGATCTCTTCTA","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAAGTACCCCAAAAAAAAAAAAGATATAGCAT","aligned_b":"CAAGTACCCCGAAAAAAAAAAAGATTTAGCAT","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"25df63ae75e31a7ae10f265973963a8719864cc6544ff3a06d1168bd297fb9b6","group_id":"1acc3db7855e5c0dcb5c1403eee630b16084a8d76ea10106d730ed3881cd3b00","id":"ALIGN-0004085","index":4085,"input":{"a":"CAAGTACCCCAAAAAAAAAAAAGATATAGCAT","b":"CAAGTACCCCGAAAAAAAAAAAGATTTAGCAT","source_sequence":"CAAGTACCCCAAAAAAAAAAAAGATATAGCAT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"T-AGGGTTACC-TGACCTAGTAGTCAGCGCACTGTCAGAACG","aligned_b":"TAAGGGTTACCTTGACCTAGTAGTCAGCGCACTGTCAGAACG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"08d63d8a7c571b0a1fcc13b0b1f00d17e8cc264909a983229bdd1914f8003c52","group_id":"bdd2ca0340279518a13d973f1e8ddeb6b841075ce041dd6d44d937ab8e0825c4","id":"ALIGN-0004107","index":4107,"input":{"a":"TAGGGTTACCTGACCTAGTAGTCAGCGCACTGTCAGAACG","b":"TAAGGGTTACCTTGACCTAGTAGTCAGCGCACTGTCAGAACG","source_sequence":"TAGGGTTACCTGACCTAGTAGTCAGCGCACTGTCAGAACG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTAAACGCCTG-CTCGGATTAAAGGATCCCCGTCCCCTCTTAGTTGCATGA","aligned_b":"GT-AACGCCTGTCTCGGATTAAAGGATCCCCGTCCCCTCTTAGTTGCATGA","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"516fd2e8112d7b9333e86a79af772a379d73a546d10fc3420e40ed684c1fba29","group_id":"9c1b72893a25742be688399d4bdd33f25fa9c8313fec8909175e8e584bba238e","id":"ALIGN-0004112","index":4112,"input":{"a":"GTAAACGCCTGCTCGGATTAAAGGATCCCCGTCCCCTCTTAGTTGCATGA","b":"GTAACGCCTGTCTCGGATTAAAGGATCCCCGTCCCCTCTTAGTTGCATGA","source_sequence":"GTAAACGCCTGCTCGGATTAAAGGATCCCCGTCCCCTCTTAGTTGCATGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAGTGTATCANNACAGCGCGGCAGGGC","aligned_b":"-AGTGTATCNTNACAGCGCGGCAGGGC","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"1f122bc43088936d0d2220120c8f16d3390385252ae9b56fda6b6265d6c0a723","group_id":"1dbeea3370a15d036edab66c067c9d73b8fed66c0f551fdc6cc0acb159abd680","id":"ALIGN-0004113","index":4113,"input":{"a":"GAGTGTATCANNACAGCGCGGCAGGGC","b":"AGTGTATCNTNACAGCGCGGCAGGGC","source_sequence":"GAGTGTATCANNACAGCGCGGCAGGGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACAACCACGTTTTTTT-TTAACTTGAACG","aligned_b":"TACAACCACGTTTTTTTGTAAAGTTGAACG","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"132ebcf37e38d521f648fc1de6086057d01489c8d57156576416d41ca78227e7","group_id":"f4354283ef7813043efe668c2a66979f3199ce6460085ca46c09231707576fe0","id":"ALIGN-0004120","index":4120,"input":{"a":"TACAACCACGTTTTTTTTTAACTTGAACG","b":"TACAACCACGTTTTTTTGTAAAGTTGAACG","source_sequence":"TACAACCACGTTTTTTTTTAACTTGAACG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAC-GGGGTCCCAGCCAAGACGGCTGTT","aligned_b":"AACAGCCGTCTTGGCTGGGAC-CCCGTC","edit_distance":14,"within_threshold":true},"family":"reverse_complement","fingerprint":"5eeed87495a55eb3a14a85a2c81aed9b6230ac57c318d88839f8fe7de6516161","group_id":"1a7dd537b76c23a02fc962ad75ede0f5fe584659715bf83439b947f8a08408d4","id":"ALIGN-0004129","index":4129,"input":{"a":"GACGGGGTCCCAGCCAAGACGGCTGTT","b":"AACAGCCGTCTTGGCTGGGACCCCGTC","source_sequence":"GACGGGGTCCCAGCCAAGACGGCTGTT","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAGACGATAANNATAAGAGTAGATACACTAAGTTTT","aligned_b":"G-GA-GATAANNATAAGAGTAGATACACT-AGTTTT","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"a906c812050bc55e637011d60e1b4fc7cc621f7b1e0ad97f30f03c2f011adc49","group_id":"74ee1b995c7e27306d762ef27ad3f5eeea2fa6214aa72fbe799b0af2cb16b372","id":"ALIGN-0004133","index":4133,"input":{"a":"GAGACGATAANNATAAGAGTAGATACACTAAGTTTT","b":"GGAGATAANNATAAGAGTAGATACACTAGTTTT","source_sequence":"GAGACGATAANNATAAGAGTAGATACACTAAGTTTT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTTCTGGGTATTGGTTGCCGTCCAGTTTCCAAG","aligned_b":"CGTTCTGGGTATTGATTGCCGTCCAGTTT-C-AG","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"6324328bf06c51bef93b5bbcffc2db37ee03cbb64a33b4364431e3f8ba1ab2b6","group_id":"10b740b5eccedfed2407288b347afe6b59eff8ce1ef274ba100ad006fdd71a84","id":"ALIGN-0004137","index":4137,"input":{"a":"CGTTCTGGGTATTGGTTGCCGTCCAGTTTCCAAG","b":"CGTTCTGGGTATTGATTGCCGTCCAGTTTCAG","source_sequence":"CGTTCTGGGTATTGGTTGCCGTCCAGTTTCCAAG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCAAG-AGGGANNAGTCCTTTCTGCCCGCTT-GGCGTGT","aligned_b":"G-AAGAAGGGANNAGTCCCTTCTGCCCGCTTCGGCGTGT","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"315d43fbc86db8cffb1b2af7b99b1a9eb7079783e4a9c50ef6871f3b12967582","group_id":"af5b308780387338bd80ab1645ae50d63d4a161ba2318c6b1ec2246e045b0f69","id":"ALIGN-0004143","index":4143,"input":{"a":"GCAAGAGGGANNAGTCCTTTCTGCCCGCTTGGCGTGT","b":"GAAGAAGGGANNAGTCCCTTCTGCCCGCTTCGGCGTGT","source_sequence":"GCAAGAGGGANNAGTCCTTTCTGCCCGCTTGGCGTGT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCGAGAACTANNGCGCG-AGACGG-GTGGATG","aligned_b":"TGGAGAACTANNGCGCGTAG-CGGTGTGGATG","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"225bb22e5a24ec267655fa60e9d4808e857fa94692881f57becc2cec2151e6ea","group_id":"428df8db4696655fd89753702d32928a5aa68753dc920becb9d3e4db7f8e6386","id":"ALIGN-0004148","index":4148,"input":{"a":"TCGAGAACTANNGCGCGAGACGGGTGGATG","b":"TGGAGAACTANNGCGCGTAGCGGTGTGGATG","source_sequence":"TCGAGAACTANNGCGCGAGACGGGTGGATG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GG-AAGCGGGGCCAATGCTCAAACATTGGG","aligned_b":"GGCAAGCGGGGCCAATGCTCAAACATTGGG","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"c546189e9b2ae2d1b66c49d4026356181bbf30091b4ec6974f0d2bb0f57372c9","group_id":"dc5524034abdffcb98ffaf5687ce645dac309a306db70b3e1537ea45014d1551","id":"ALIGN-0004162","index":4162,"input":{"a":"GGAAGCGGGGCCAATGCTCAAACATTGGG","b":"GGCAAGCGGGGCCAATGCTCAAACATTGGG","source_sequence":"GGAAGCGGGGCCAATGCTCAAACATTGGG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTTCGACCTCCCCCCCCTCGGTTTATG","aligned_b":"GGTTCGACCTCCCCGCCCTCGGTTTATG","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"a321e5dd4226e3bba074b88f1d07ddd0829d518835680cc221c974af84a09d74","group_id":"71daf08fc6674e4add3c9bd86c9a9455f481f0e63e78b31f09918ce6ce4b8065","id":"ALIGN-0004185","index":4185,"input":{"a":"GGTTCGACCTCCCCCCCCTCGGTTTATG","b":"GGTTCGACCTCCCCGCCCTCGGTTTATG","source_sequence":"GGTTCGACCTCCCCCCCCTCGGTTTATG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTCAAGG-AAAGGAGGAGGAGGTACTGAATA","aligned_b":"GTCAAGGAAAAGGAGGAGGAGGTAC-GAATA","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"ebbd9583e2db3fbeaf8e4f46e79fb3b36e9f65de2de27b080ff30f2344a3a11c","group_id":"a1127fad36bd3466a94906f6113a8637d957e8c3921c7a252da722cdbc278b14","id":"ALIGN-0004186","index":4186,"input":{"a":"GTCAAGGAAAGGAGGAGGAGGTACTGAATA","b":"GTCAAGGAAAAGGAGGAGGAGGTACGAATA","source_sequence":"GTCAAGGAAAGGAGGAGGAGGTACTGAATA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TAAGATGCGTACTTCGATGATGCGGACGTTGC","aligned_b":"CTAAGTTG-GT-CTTCGATGATGCGGACGTTGC","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"be78641fa988db9c9825769fb828efe9239c3bc860aa72b3bfb5be660e332c08","group_id":"90297c4135197291275ec05c8be2d1827e4d881dd00ec0535903a881fcaf7f4f","id":"ALIGN-0004207","index":4207,"input":{"a":"TAAGATGCGTACTTCGATGATGCGGACGTTGC","b":"CTAAGTTGGTCTTCGATGATGCGGACGTTGC","source_sequence":"TAAGATGCGTACTTCGATGATGCGGACGTTGC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCCGGCCACCTCCCGTCACAGCGTCCTAAATGC-TAGAAGT","aligned_b":"GCC-GCCACCTCCCGTCACAGCGTCCTAAATGCTTAGAAGT","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"20c4afec68679ef37579e144094d53d957cd8263d1550022c055380e8fe066df","group_id":"e256a7af980d8feeb3317ce7192adcea6802b6b8324461d45780b1f397a2841b","id":"ALIGN-0004212","index":4212,"input":{"a":"GCCGGCCACCTCCCGTCACAGCGTCCTAAATGCTAGAAGT","b":"GCCGCCACCTCCCGTCACAGCGTCCTAAATGCTTAGAAGT","source_sequence":"GCCGGCCACCTCCCGTCACAGCGTCCTAAATGCTAGAAGT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGT-GCTAGGANNCATA-AGTTGTAACTTTGGC","aligned_b":"AGTGGCTAGCANNCATACGGTTGTAACTTTGGC","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"0a501fe3833d1ec49c875c609ee5f5ab5f5472e8bffaef04cb5fe0e9f2b6790b","group_id":"9bdfe3dbef11134c3dd60c1fd6b429e186293fc70c843c7a0fb04d6cf660bdeb","id":"ALIGN-0004213","index":4213,"input":{"a":"AGTGCTAGGANNCATAAGTTGTAACTTTGGC","b":"AGTGGCTAGCANNCATACGGTTGTAACTTTGGC","source_sequence":"AGTGCTAGGANNCATAAGTTGTAACTTTGGC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTACGCCCANNTCCAGACCCCGGCCGCATG-TAATCGCC","aligned_b":"GGTACGCCCANNTCCAGACCCCGGCCGCAAGTTAAT-GCC","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"31023002946265763201803c6a6dba58d8c04ff874a3ade224cf922ce13b99fb","group_id":"d1fa97b3bc44bdee6ebd60ca52ac1372dea2dd07ccf3f742bb34d12f39bfbad9","id":"ALIGN-0004218","index":4218,"input":{"a":"GGTACGCCCANNTCCAGACCCCGGCCGCATGTAATCGCC","b":"GGTACGCCCANNTCCAGACCCCGGCCGCAAGTTAATGCC","source_sequence":"GGTACGCCCANNTCCAGACCCCGGCCGCATGTAATCGCC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--G-ACGA-AACGGT-GCGACCGCGATGGAACCT","aligned_b":"AGGTTCCATCGCGGTCGC-ACCG-TTTCG--TC-","edit_distance":18,"within_threshold":true},"family":"reverse_complement","fingerprint":"9b6b4393090159533afcb5ac821df26d75b69b04737ce6d8aff0b8f32dc6e56d","group_id":"35460141bf5e34e24a31ed171a9f862403a9713ae54205bec09bb4497b9797e2","id":"ALIGN-0004219","index":4219,"input":{"a":"GACGAAACGGTGCGACCGCGATGGAACCT","b":"AGGTTCCATCGCGGTCGCACCGTTTCGTC","source_sequence":"GACGAAACGGTGCGACCGCGATGGAACCT","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATGCGTGACTTGGTTCTGTACC-AG-C-C-C-T","aligned_b":"A-G-G-G-C-TGGTACAGAACCAAGTCACGCAT","edit_distance":13,"within_threshold":true},"family":"reverse_complement","fingerprint":"75276200810dcb5133902f6bac789a6d277f66ea1741be473fb32b61de663389","group_id":"4206d15391dce59dcd2463e1f57239b0f8200a974b1e9c616745286f36d92246","id":"ALIGN-0004224","index":4224,"input":{"a":"ATGCGTGACTTGGTTCTGTACCAGCCCT","b":"AGGGCTGGTACAGAACCAAGTCACGCAT","source_sequence":"ATGCGTGACTTGGTTCTGTACCAGCCCT","threshold":13},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGTCGTGTCAAAAAAAAACTACACCCCT","aligned_b":"ACGTATTGTC-AAAAAAAACTACACCCCT","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"a6559c001f86989bdfd785f4287ffc88a329a0fa86beaf41ea1acda33eaece9a","group_id":"8e58b1890fc62a6daa86e61b5da79c4cddde60345b885282109a9699f0d4109c","id":"ALIGN-0004250","index":4250,"input":{"a":"ACGTCGTGTCAAAAAAAAACTACACCCCT","b":"ACGTATTGTCAAAAAAAACTACACCCCT","source_sequence":"ACGTCGTGTCAAAAAAAAACTACACCCCT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAGATGTTACGGGGGGGGGGGCGGTCATGAC","aligned_b":"AAG-TGTTAC-GGGGGCGGGGCGGTCGTGAC","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"4f9f70c17fad9f1b804fab12114fce849e11d426d154fa42f4ebd1296d84d568","group_id":"e250a585e04cbebf135ccfbcd4eff1272cd66cb475eba759784b303de2802418","id":"ALIGN-0004260","index":4260,"input":{"a":"AAGATGTTACGGGGGGGGGGGCGGTCATGAC","b":"AAGTGTTACGGGGGCGGGGCGGTCGTGAC","source_sequence":"AAGATGTTACGGGGGGGGGGGCGGTCATGAC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCTGCGAGGGACGGTGAGCAACGGGC","aligned_b":"GCCCGTTGCTCACCGTCCCTCGCAGAA","edit_distance":19,"within_threshold":true},"family":"reverse_complement","fingerprint":"e1044d3875a351ce92e2e4ffe02b8f15287f24b1111a9f889910d3298e27cbf8","group_id":"d4c1dfd32ed29ca966aec99f3b36ed2a1b742cf2285772e04e230e44b26abe5b","id":"ALIGN-0004264","index":4264,"input":{"a":"TTCTGCGAGGGACGGTGAGCAACGGGC","b":"GCCCGTTGCTCACCGTCCCTCGCAGAA","source_sequence":"TTCTGCGAGGGACGGTGAGCAACGGGC","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTAGGTCCCGGGGGGGGGGGGGGGTGCGGCTCTT","aligned_b":"-TTA-GTCCC-GGGGGGGGGGGGGGTGCGGCTCTT","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"820db1b5cbebf946ee1ff312e976f1fad14e7bd307410cf7bb266cb2130cef89","group_id":"4a4d999bed004c309a2611e37a75a28930bf816761c664a19b0fa117a4d6188a","id":"ALIGN-0004290","index":4290,"input":{"a":"GTTAGGTCCCGGGGGGGGGGGGGGGTGCGGCTCTT","b":"TTAGTCCCGGGGGGGGGGGGGGTGCGGCTCTT","source_sequence":"GTTAGGTCCCGGGGGGGGGGGGGGGTGCGGCTCTT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATGGTATCGTAGTAGTAGTAGTAGTAGTAGGCCTGTATC","aligned_b":"ATGGTATCGTAGTAGTAGTAGTAGTTGTAGGCCTGTATC","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"1211339c2ca99c7268c59649ed7968e31bb343b3c810639d36292b0e7f869594","group_id":"a6ef7de54aa584b6fee7836ac27e9e118e5983e5a2dcb42ba2f5b61a6c960c73","id":"ALIGN-0004311","index":4311,"input":{"a":"ATGGTATCGTAGTAGTAGTAGTAGTAGTAGGCCTGTATC","b":"ATGGTATCGTAGTAGTAGTAGTAGTTGTAGGCCTGTATC","source_sequence":"ATGGTATCGTAGTAGTAGTAGTAGTAGTAGGCCTGTATC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAAAGTGCTGTACCCGAGGGTTTACACGTTCACAAACTCAAGTTCA","aligned_b":"TGAACTTGAGTTTGTGAACGTGTAAACCCTCGGGTACAGCACTTTG","edit_distance":26,"within_threshold":false},"family":"reverse_complement","fingerprint":"0207237b77aa61b5f702894c4baab9995a1f5dc0c6d585d47709390f4942d936","group_id":"04875eab6674ee0cd4dcde1f531616d9abc4668928e60e72e108218ee0553728","id":"ALIGN-0004319","index":4319,"input":{"a":"CAAAGTGCTGTACCCGAGGGTTTACACGTTCACAAACTCAAGTTCA","b":"TGAACTTGAGTTTGTGAACGTGTAAACCCTCGGGTACAGCACTTTG","source_sequence":"CAAAGTGCTGTACCCGAGGGTTTACACGTTCACAAACTCAAGTTCA","threshold":25},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--A-CTTGGTGCGCTACT--TCGTCGCCGATCATTTGCCGATGAAGCTGT","aligned_b":"ACAGCTTCATCGGCAAATGATCGGCGACGA--AGTAGCGCACCAA---GT","edit_distance":24,"within_threshold":true},"family":"reverse_complement","fingerprint":"42db082233c98c1e3c627e8a71caa2b39352f336e27f3f5bddabff5db1d4fd68","group_id":"5766436790fd73538acc3ac623c773581d95099890ea8670ec26b1478a7f95c6","id":"ALIGN-0004324","index":4324,"input":{"a":"ACTTGGTGCGCTACTTCGTCGCCGATCATTTGCCGATGAAGCTGT","b":"ACAGCTTCATCGGCAAATGATCGGCGACGAAGTAGCGCACCAAGT","source_sequence":"ACTTGGTGCGCTACTTCGTCGCCGATCATTTGCCGATGAAGCTGT","threshold":25},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAGCGAGTTGAGGAGGAGGAGGAGGAGGACCGAATA","aligned_b":"AAGCGAGTTGAGGAGGAGGAGGA-G-GGA-CGAATA","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"405ef1e5d255be4c9e8e7b50238ea8e2f6bda0999bc96d104ee87e7fd78dc975","group_id":"ca6034a95923652a018293212f6f566d8d88b51586e4f3ab78399dc8af604678","id":"ALIGN-0004326","index":4326,"input":{"a":"GAGCGAGTTGAGGAGGAGGAGGAGGAGGACCGAATA","b":"AAGCGAGTTGAGGAGGAGGAGGAGGGACGAATA","source_sequence":"GAGCGAGTTGAGGAGGAGGAGGAGGAGGACCGAATA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCA-GAC-GGAANNTAAGAGTGTCCCGTCCTGATTGACCGGGAGGAT","aligned_b":"TCACGACGGGGANNTAAGAGTGTCCCGTCCTGATTG-CCGGGAGGAT","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"8596fb5ebd62363bee1c7b1b21342180421b4be1b1411d363b7c41a91ca060ad","group_id":"c00081cb821311076fc7e3a660ae6ce8bf994d7ac7751eb186119586f029989e","id":"ALIGN-0004328","index":4328,"input":{"a":"TCAGACGGAANNTAAGAGTGTCCCGTCCTGATTGACCGGGAGGAT","b":"TCACGACGGGGANNTAAGAGTGTCCCGTCCTGATTGCCGGGAGGAT","source_sequence":"TCAGACGGAANNTAAGAGTGTCCCGTCCTGATTGACCGGGAGGAT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCTTAGACACCAC-CACCA-CCACCACCACCATTCCACAGT","aligned_b":"GCTTAGACA-CACTCTCCACCCACCACCACCATTCCACAGT","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"14b824f74daf9f95319485ebb580f5257010978097037d0f3f1e5de142f7f087","group_id":"815c714b6ed7c1f236d6aed70bb47e88d58ecfd4550635cabda2c69b9650027b","id":"ALIGN-0004351","index":4351,"input":{"a":"GCTTAGACACCACCACCACCACCACCACCATTCCACAGT","b":"GCTTAGACACACTCTCCACCCACCACCACCATTCCACAGT","source_sequence":"GCTTAGACACCACCACCACCACCACCACCATTCCACAGT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACGTGTAGAGAATGTTTTGCACCACCA","aligned_b":"TCCGTGTA-AGAATGTTTTGCACCCCCA","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"3e291c573aa9149faf85270248cae7e3d24314f850a21e3a40c09159094fbd39","group_id":"8de80d3558c7f16e23bc3afd2f6eee5225b5fe04107915439db2dc979bae8279","id":"ALIGN-0004352","index":4352,"input":{"a":"TACGTGTAGAGAATGTTTTGCACCACCA","b":"TCCGTGTAAGAATGTTTTGCACCCCCA","source_sequence":"TACGTGTAGAGAATGTTTTGCACCACCA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTTATCCCTACGACGACGCAGTACCTG","aligned_b":"CTTATCCCCTCGACGACG-AGTACCTG","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"33512ce75a79eb261ea4e5764d526dc826ff5b0b15386cc3054e2576ecbe06ff","group_id":"c68ca99dd1617f5c4ee986515bc72d6ec9273208aa79f7cd89e774c224156493","id":"ALIGN-0004361","index":4361,"input":{"a":"CTTATCCCTACGACGACGCAGTACCTG","b":"CTTATCCCCTCGACGACGAGTACCTG","source_sequence":"CTTATCCCTACGACGACGCAGTACCTG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCGCACCTGGGGACATACTTCTCCC","aligned_b":"GGGAGAAGTATGTCCCCAGGTGCGCT","edit_distance":18,"within_threshold":false},"family":"reverse_complement","fingerprint":"e276bfa8fdd15cc4f7ff3293960ce07f7efd5f481073235b495427f8d8b3f0bf","group_id":"70f7860bb1c7f5ed101e63d1335321cb8a93c992b2e580692c7bb9bffce2a279","id":"ALIGN-0004369","index":4369,"input":{"a":"AGCGCACCTGGGGACATACTTCTCCC","b":"GGGAGAAGTATGTCCCCAGGTGCGCT","source_sequence":"AGCGCACCTGGGGACATACTTCTCCC","threshold":17},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCAGAAGTACTTTTTTTTTTGATGTTTTA","aligned_b":"CCAGGTGTACTTTTTTTTTTGATGTTTTA","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"47fc5765b97806d380c9ade310e793301df151cc635fd3c950c009ea88350e1c","group_id":"646bbc27cc82d912f84880fbff6ec0bf4334f4ca9b1d1115d974d4fc7e3552e2","id":"ALIGN-0004380","index":4380,"input":{"a":"CCAGAAGTACTTTTTTTTTTGATGTTTTA","b":"CCAGGTGTACTTTTTTTTTTGATGTTTTA","source_sequence":"CCAGAAGTACTTTTTTTTTTGATGTTTTA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACTAGAGCGCTATTAATCCAAGTACCTTCCAATGTAACTGTCGTGGCT","aligned_b":"AACTAGAGCGCTATTAATCCAAGTA-CTTCCAATGTAACTGTCG-GGCT","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"e3efe0098571954a395ee4af6d6f10a89c776fc921712728483c7379082126c0","group_id":"b5e191174a1e8de29040ca8c958864427838313d885016c1638892eaec2b0f99","id":"ALIGN-0004402","index":4402,"input":{"a":"AACTAGAGCGCTATTAATCCAAGTACCTTCCAATGTAACTGTCGTGGCT","b":"AACTAGAGCGCTATTAATCCAAGTACTTCCAATGTAACTGTCGGGCT","source_sequence":"AACTAGAGCGCTATTAATCCAAGTACCTTCCAATGTAACTGTCGTGGCT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCCGGCGAATTTTTTTTATGGTATATG","aligned_b":"TTCCGGCGAA-TTTTTTTATGGTATACT","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"744f15d583e61160196a069968252761cc691035d8513b65302208571d41fc4e","group_id":"eae74d6bc0a733380b346ac0221ddbbe34861594b3a45f32522316c836fe8c93","id":"ALIGN-0004440","index":4440,"input":{"a":"TTCCGGCGAATTTTTTTTATGGTATATG","b":"TTCCGGCGAATTTTTTTATGGTATACT","source_sequence":"TTCCGGCGAATTTTTTTTATGGTATATG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATGTTTGCAAAAA-AAAAAA-AATAAAGAGGGT","aligned_b":"GATGTTTGCAAAAATAAAAAAGAATAAAGAGGGT","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"b2ebb61386c06f77b8a6a84d9c33bfc8cfb5169a30f36532764338ec051ff7fd","group_id":"41cf907170db665a493c455194984c6b693cbf06a548151e532f48079589f227","id":"ALIGN-0004455","index":4455,"input":{"a":"GATGTTTGCAAAAAAAAAAAAATAAAGAGGGT","b":"GATGTTTGCAAAAATAAAAAAGAATAAAGAGGGT","source_sequence":"GATGTTTGCAAAAAAAAAAAAATAAAGAGGGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGCATCATGGAGCTACCCC-CTATAGTGCGGACGCGGGTGGC","aligned_b":"TGCATCATGGAGCTACCCCGCTATAGCGCGGACGCGGGTGGC","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"734e1f805669616ce2fc61d72ed17a35707f9944ef165581f6c7e8ccc2b8588e","group_id":"f17dac1ff53849f5dd7e37093597050383b30e43aac6ba653535bf69a9df5d0a","id":"ALIGN-0004462","index":4462,"input":{"a":"TGCATCATGGAGCTACCCCCTATAGTGCGGACGCGGGTGGC","b":"TGCATCATGGAGCTACCCCGCTATAGCGCGGACGCGGGTGGC","source_sequence":"TGCATCATGGAGCTACCCCCTATAGTGCGGACGCGGGTGGC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTATGTAGTTTTTTTTTTTTTTTCACACCTCGT","aligned_b":"AGTGTGTAGTTTTTTTTTTTTTTTCACACCTCGT","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"e859304d2ba099039666d64f4c969e7d4774467eb72f12ff586e31630695231e","group_id":"f06d17ede5461287fca30e3f7acc67c4c94e651b8152018c8b4443e9e2dfa26b","id":"ALIGN-0004465","index":4465,"input":{"a":"AGTATGTAGTTTTTTTTTTTTTTTCACACCTCGT","b":"AGTGTGTAGTTTTTTTTTTTTTTTCACACCTCGT","source_sequence":"AGTATGTAGTTTTTTTTTTTTTTTCACACCTCGT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGCAATATGNNAGTCACGACGG-TAAGGCTTAAG","aligned_b":"GCGCAATATGNNAGTCANGACGGATAAGGCTTAAG","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"cecded0a7ac0771b73643a66b63896cf783ea57f8656ac405ffb0e69ae9c9dbc","group_id":"e66f15b1ae3c8857ea398399469f204f65d6f1c3c3222995126342d98b4de5f0","id":"ALIGN-0004483","index":4483,"input":{"a":"GCGCAATATGNNAGTCACGACGGTAAGGCTTAAG","b":"GCGCAATATGNNAGTCANGACGGATAAGGCTTAAG","source_sequence":"GCGCAATATGNNAGTCACGACGGTAAGGCTTAAG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTCTTCGTGTCGTCGTCGTCGTCGTCGCCCAATCTT","aligned_b":"GTCTTCGTGTCGTCGTCGTCGTCGTCGCCCAATC-T","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"d3c9a11b7bdf5afb7b0f8dc044a583d873fb0d83759693cdaae9310a04bdd3b6","group_id":"1792d16599cfb1cce5ebb246a28e315d368e7d44152e74eacc9d90502fde431b","id":"ALIGN-0004496","index":4496,"input":{"a":"GTCTTCGTGTCGTCGTCGTCGTCGTCGCCCAATCTT","b":"GTCTTCGTGTCGTCGTCGTCGTCGTCGCCCAATCT","source_sequence":"GTCTTCGTGTCGTCGTCGTCGTCGTCGCCCAATCTT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGGTGCGAGCAAAAAAAAAAAAGAATTACAT","aligned_b":"GGGTGCGAGC-AAAAAAAAAAAGAATTACAT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"9d698a8f95281879a6b5f89f1f1eb079f06179180f604399dbafcf4104f600f2","group_id":"ad1083812fd997c8dca93c55a65f568a73d017c5efc74a02d624392ee443eb03","id":"ALIGN-0004500","index":4500,"input":{"a":"GGGTGCGAGCAAAAAAAAAAAAGAATTACAT","b":"GGGTGCGAGCAAAAAAAAAAAGAATTACAT","source_sequence":"GGGTGCGAGCAAAAAAAAAAAAGAATTACAT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCCCTGTCTTCTTCTTCTT-CGAACTACTA","aligned_b":"TTCCCTGTCTTCTCCTTCTTACG-ACTACTA","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"15856688453bb7f27ca5b1fc5bfb2aeed2697d4790c77c10200a01318c8dacc2","group_id":"fa11bf8d4c93575afdcead2cb024fd5c5cfaf4a4e28529a44e4a6b8bed959bfd","id":"ALIGN-0004506","index":4506,"input":{"a":"TTCCCTGTCTTCTTCTTCTTCGAACTACTA","b":"TTCCCTGTCTTCTCCTTCTTACGACTACTA","source_sequence":"TTCCCTGTCTTCTTCTTCTTCGAACTACTA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GCCATAGTCTGGGAT-TAAGA-TTTAGCG","aligned_b":"CGCTA-AATCT-TAATCCCAGACTATGGC-","edit_distance":14,"within_threshold":true},"family":"reverse_complement","fingerprint":"a0c5e4fbc2b49482c9fb68b46b0407eba6983abc3885271b3d6c73c591f970bb","group_id":"67f88c0d075d9917d1a4e1c3a3786414ca52cedec1f69b912ad3806e9c375c0c","id":"ALIGN-0004509","index":4509,"input":{"a":"GCCATAGTCTGGGATTAAGATTTAGCG","b":"CGCTAAATCTTAATCCCAGACTATGGC","source_sequence":"GCCATAGTCTGGGATTAAGATTTAGCG","threshold":14},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGATCCGCTGTAGTA-GTAGTAGTAGTAATTGAATGA","aligned_b":"CGATCCGCTGTAGTATGTCGTAGTAGCAATTGAATGA","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"3d862d5815661761c980f620dd1d6be4709a33412a1d9adca2c9cfaaca90c996","group_id":"07f1b14f4e44cf313bf1073c5ab6959bde526ba000d1872b447a2286628cb079","id":"ALIGN-0004511","index":4511,"input":{"a":"CGATCCGCTGTAGTAGTAGTAGTAGTAATTGAATGA","b":"CGATCCGCTGTAGTATGTCGTAGTAGCAATTGAATGA","source_sequence":"CGATCCGCTGTAGTAGTAGTAGTAGTAATTGAATGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGCCG-ACAGCNNGAGGAGCTTGTGTGTAACGGC","aligned_b":"TGCCGAAGATCNNGAGGAGCTTGTGTGNAACGGC","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"9e8b59e43b046ed5193480080bf891e449e6cf2a55dc207a51b8df9895f3c591","group_id":"3be57a595082bd7ba78e4d24cd043df1a5bae43978835e9fd0dfadeb33868eb3","id":"ALIGN-0004538","index":4538,"input":{"a":"TGCCGACAGCNNGAGGAGCTTGTGTGTAACGGC","b":"TGCCGAAGATCNNGAGGAGCTTGTGTGNAACGGC","source_sequence":"TGCCGACAGCNNGAGGAGCTTGTGTGTAACGGC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACCACACCAGAAGAAGAAGAAGAAGAAGATGACCC-CGT","aligned_b":"TACCACACCAGAAGAAGAAGAAGAAGAAGATGACCCTCGT","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"7bac89108e0381e3c50c99e9e17853b53bba57263f16c8b48ab55b2bbcdb1d78","group_id":"bdbdf367c58f89012912f63a4b735e4b67b2cda1972fe786513b51b033bd6cb2","id":"ALIGN-0004541","index":4541,"input":{"a":"TACCACACCAGAAGAAGAAGAAGAAGAAGATGACCCCGT","b":"TACCACACCAGAAGAAGAAGAAGAAGAAGATGACCCTCGT","source_sequence":"TACCACACCAGAAGAAGAAGAAGAAGAAGATGACCCCGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTTTTGCAGGGG-GGGGGGGGGGGCGTAGATA","aligned_b":"AGTTTTGCAGGGGAGGGGGGGGGGGCGTAGATA","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"14af1dc8860fb7b8dde31fe52b8878f94c09843b89129e5f370517ccd87ec1fa","group_id":"b44e9129874abce63137676ace4e44d9af6581c13565f361d9ab8c4275789a2e","id":"ALIGN-0004545","index":4545,"input":{"a":"AGTTTTGCAGGGGGGGGGGGGGGGCGTAGATA","b":"AGTTTTGCAGGGGAGGGGGGGGGGGCGTAGATA","source_sequence":"AGTTTTGCAGGGGGGGGGGGGGGGCGTAGATA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-ACTTGAACCGNNGGGGCTTGGATGGC-CATGGGTTTGAAAATAGTTA-GATG","aligned_b":"TACTTGAACCGNNGGGGCTTGGATGGCGCATGGGTTTGAAAATAGTTACGATG","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"ea6ed8bee48e688e6b9e6ddc62c3413c05395382b571f77561a573e17c3f9b0a","group_id":"389dc34772545fb53a3c2b7186ff062bb636f2636c871a6092b757b5ec2fa4f1","id":"ALIGN-0004548","index":4548,"input":{"a":"ACTTGAACCGNNGGGGCTTGGATGGCCATGGGTTTGAAAATAGTTAGATG","b":"TACTTGAACCGNNGGGGCTTGGATGGCGCATGGGTTTGAAAATAGTTACGATG","source_sequence":"ACTTGAACCGNNGGGGCTTGGATGGCCATGGGTTTGAAAATAGTTAGATG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATCCGGTACATTTGTACTCATTTTACA","aligned_b":"CACCAGGAACATTTGTACT-A-TTTACA","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"0e830bbaa59e23c9d6a4396bc50c9d227c0cc3851ccfcc698f841c7506f40a39","group_id":"f47f12a5065235a2f6422e66a8969e73046939146b44240ce8995a66b6023993","id":"ALIGN-0004572","index":4572,"input":{"a":"CATCCGGTACATTTGTACTCATTTTACA","b":"CACCAGGAACATTTGTACTATTTACA","source_sequence":"CATCCGGTACATTTGTACTCATTTTACA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATAAAAAGGANNTGATTGGCATCCGAAGGGTA-ATTGGA","aligned_b":"ATAAAAAGGANNTGATTGGCATCCGAA-GGTAGATTGGA","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"4b2dcdacb4f6e392c27023c021adc142f8b2acc376dc367008e0336e40940628","group_id":"80256319b84f4c44fee2b1ee14d2608c6feeae1eaf0dd6de26e95abf9a3a23cf","id":"ALIGN-0004573","index":4573,"input":{"a":"ATAAAAAGGANNTGATTGGCATCCGAAGGGTAATTGGA","b":"ATAAAAAGGANNTGATTGGCATCCGAAGGTAGATTGGA","source_sequence":"ATAAAAAGGANNTGATTGGCATCCGAAGGGTAATTGGA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACGGAATCACGGCCCGAGTGGGGCC--GAGT-C-TC","aligned_b":"GA--G-A-CTCGGCCCCACTCGGGCCGTGATTCCGTA","edit_distance":15,"within_threshold":true},"family":"reverse_complement","fingerprint":"b941dcc482f958efc759b087fd9deaed0b79b871621ea8a1bcd4d715bcd6c618","group_id":"89b4f4994044eed43b2cddfec5e7c959cafaf556edb5fb9f16894d6c5097df39","id":"ALIGN-0004599","index":4599,"input":{"a":"TACGGAATCACGGCCCGAGTGGGGCCGAGTCTC","b":"GAGACTCGGCCCCACTCGGGCCGTGATTCCGTA","source_sequence":"TACGGAATCACGGCCCGAGTGGGGCCGAGTCTC","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TTCGATCGTTGGGGGGGGGGGGGGGGCCGC-GAGAA","aligned_b":"TTTCGAT-GTTGGGGGGGGGGGGGGGGCCGCAGAGAA","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"9f61e5a949e3288e43efb5203869b10749d0a4173dd6f8687be9d030400ff378","group_id":"87df81f7bfbac989bbf8b0e06af60dca932d2f45ea2968938b3f35ea1dd0e913","id":"ALIGN-0004620","index":4620,"input":{"a":"TTCGATCGTTGGGGGGGGGGGGGGGGCCGCGAGAA","b":"TTTCGATGTTGGGGGGGGGGGGGGGGCCGCAGAGAA","source_sequence":"TTCGATCGTTGGGGGGGGGGGGGGGGCCGCGAGAA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATCCC-GGATCAATCCAGAT-CCGGGTT","aligned_b":"CATCCCAGGATCAATCC-GATCCCGGGTT","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"ab1e6c6269e4680e7d6b78c78d4d8237548d9a17684a5b22d6f2934b426fc79e","group_id":"05f3d4db7b0fdbc035b7b6e5cd436f62d3d7e1391fd5417955c6ef44e5982bfc","id":"ALIGN-0004627","index":4627,"input":{"a":"CATCCCGGATCAATCCAGATCCGGGTT","b":"CATCCCAGGATCAATCCGATCCCGGGTT","source_sequence":"CATCCCGGATCAATCCAGATCCGGGTT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCCCTATCGATAGTGGCTCCACCCGGGAGCAATACACCGACACGT","aligned_b":"TCCCTATCGAT-GT-GCTCCACCCGGCAGCAATACACCGACACGT","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"c222a16264fae71e5968b727b44a10acbaf4986fde720ea837ee6fad0ff8fcab","group_id":"4f1f506361b90c7f83d4f5110e991f3149c34d84877a0d8e9327e15faf22a4f0","id":"ALIGN-0004657","index":4657,"input":{"a":"TCCCTATCGATAGTGGCTCCACCCGGGAGCAATACACCGACACGT","b":"TCCCTATCGATGTGCTCCACCCGGCAGCAATACACCGACACGT","source_sequence":"TCCCTATCGATAGTGGCTCCACCCGGGAGCAATACACCGACACGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTGAG-GATTGGGCTGACCTGGCA-ACAAGACCTGCGACTCAC","aligned_b":"GTGAGTCGCAGGTCT-TGTTGCCAGGTCAG-CCCAATCCTCAA","edit_distance":23,"within_threshold":false},"family":"reverse_complement","fingerprint":"0c0c12fb1e07ce16fbe853a47367913a1d847b9283e8cfed3d4c3fb554c81927","group_id":"fd3ed7598ce9944172dce7e3e3d2ce49fe9b07d54cc6f259d653fb22a7c2d54c","id":"ALIGN-0004679","index":4679,"input":{"a":"TTGAGGATTGGGCTGACCTGGCAACAAGACCTGCGACTCAC","b":"GTGAGTCGCAGGTCTTGTTGCCAGGTCAGCCCAATCCTCAA","source_sequence":"TTGAGGATTGGGCTGACCTGGCAACAAGACCTGCGACTCAC","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACGATGAACAAAAAAAAAAAAAAACATTTCTGAC","aligned_b":"-ACGATGAACAAAAAAAAAAAAAAACATTTCTGAC","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"a184242e2a1964d457544a12f30509a5a3c6eae185ab4031eb451ac325b21fe9","group_id":"3ff3273b32a18213ac57d6b494801c9ac870708d22d99e1c827dbe0f70af6951","id":"ALIGN-0004690","index":4690,"input":{"a":"AACGATGAACAAAAAAAAAAAAAAACATTTCTGAC","b":"ACGATGAACAAAAAAAAAAAAAAACATTTCTGAC","source_sequence":"AACGATGAACAAAAAAAAAAAAAAACATTTCTGAC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAACACACCAAAAAAAAAA-AAAATAATCCCGCC","aligned_b":"TTACACACCAAAAAAAAAACAAAAAAATCCCGCC","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"7a1d9ccc6e4db4c78c3925f79dc39e8cd55dc7d316a06aba092340d8b9a4876a","group_id":"286b7951aaa4e6614d2ebf990de7da1864daa8ef1b9f531aba79d22dce29e50e","id":"ALIGN-0004695","index":4695,"input":{"a":"TAACACACCAAAAAAAAAAAAAATAATCCCGCC","b":"TTACACACCAAAAAAAAAACAAAAAAATCCCGCC","source_sequence":"TAACACACCAAAAAAAAAAAAAATAATCCCGCC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATTTGTGTGGNNTGGTCGCCGACC-ATGC","aligned_b":"AATTGTGTGGNNTGGTCGCCGACCGCTGC","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"5a0c875242a49d007e5aa2a2ce4dcf772627a82574cb1c475ac8af290c7b3dcd","group_id":"603323cfe19ece8fc87d544d461c86c89571eea0408d5f7acb546dd30fe24c11","id":"ALIGN-0004698","index":4698,"input":{"a":"ATTTGTGTGGNNTGGTCGCCGACCATGC","b":"AATTGTGTGGNNTGGTCGCCGACCGCTGC","source_sequence":"ATTTGTGTGGNNTGGTCGCCGACCATGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCCCGGTAATTCCCCCCCTCCGGCC-AACTAGTGCAGCAGCAGGTA","aligned_b":"TACCTGCTGCTGCACTAGT-TGGCCGGAGGGGGGGAATTACCGGGC","edit_distance":28,"within_threshold":false},"family":"reverse_complement","fingerprint":"cf8f3abb9c774f679cbb46655a4bdbdbf79e20ae7b4ffe27189b868feaa41058","group_id":"6222482d5c06f936ab0a2cedd9be2091bb660113a88ae0f53ee466aa398fc88e","id":"ALIGN-0004704","index":4704,"input":{"a":"GCCCGGTAATTCCCCCCCTCCGGCCAACTAGTGCAGCAGCAGGTA","b":"TACCTGCTGCTGCACTAGTTGGCCGGAGGGGGGGAATTACCGGGC","source_sequence":"GCCCGGTAATTCCCCCCCTCCGGCCAACTAGTGCAGCAGCAGGTA","threshold":27},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACTAACTTCNNGCAGCTACACGTCATACAACTAGCGGCTTCAGGTGC","aligned_b":"TACTAACTTCNNGCAGCTACACGTCATACAACTA-CGGCTTCAGGTGC","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"7dffcc8c0f254d53071a4313dc0437bed29921b4c20142a1e326098ea0a00da1","group_id":"bb5c5ebf1c54da0b88da167f7a3c71ba6b04384f4fbf83829840170a7fd7082a","id":"ALIGN-0004723","index":4723,"input":{"a":"TACTAACTTCNNGCAGCTACACGTCATACAACTAGCGGCTTCAGGTGC","b":"TACTAACTTCNNGCAGCTACACGTCATACAACTACGGCTTCAGGTGC","source_sequence":"TACTAACTTCNNGCAGCTACACGTCATACAACTAGCGGCTTCAGGTGC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACACTGCGTNNTAGGTAAGGCATC-GTT","aligned_b":"CACACTGCGTNNTAGGTAAGGCATCGGTT","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"f32dac129e5541aafbf62d607d8acde72a1eefc325fcd56fc6cbe9c1ffdf5abb","group_id":"535389ddc7b47a1e1d84141ce8e69e0eeae0dda14b997f68979b7bb88b54530d","id":"ALIGN-0004743","index":4743,"input":{"a":"TACACTGCGTNNTAGGTAAGGCATCGTT","b":"CACACTGCGTNNTAGGTAAGGCATCGGTT","source_sequence":"TACACTGCGTNNTAGGTAAGGCATCGTT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGGGCATTTGGTGGTGGTGGTGGTGGTGGCGCACGAGC","aligned_b":"GCGGGCATTTGGTGGTGGTGGTGGTGGTGTCGCACGAGC","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"d8deee811f071632cbba08c845d4a2f029e0de2a1309099b79a6f3d91072fd24","group_id":"dd925b33590e1d2ac83a1be40da8e77449bceefbb29b3a9ab4380780efbb9d2b","id":"ALIGN-0004746","index":4746,"input":{"a":"GCGGGCATTTGGTGGTGGTGGTGGTGGTGGCGCACGAGC","b":"GCGGGCATTTGGTGGTGGTGGTGGTGGTGTCGCACGAGC","source_sequence":"GCGGGCATTTGGTGGTGGTGGTGGTGGTGGCGCACGAGC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTAGAATCAGTTTTTTTTTTTTAGTTCGGTGT","aligned_b":"CTAGAATCAGTATTTTTTTTTTAGTTCGGTGT","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"c2596e0d57b271c1eaf799bc763ff748df2eab2e6848b261e8104372e9157643","group_id":"c43a9015b7d5ea0defc7f31ae3ccb43623c1c0d952c748e2c6ada26ef57d4f83","id":"ALIGN-0004750","index":4750,"input":{"a":"CTAGAATCAGTTTTTTTTTTTTAGTTCGGTGT","b":"CTAGAATCAGTATTTTTTTTTTAGTTCGGTGT","source_sequence":"CTAGAATCAGTTTTTTTTTTTTAGTTCGGTGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--ATG-GTCACTAGAGCCGAAAAGATACTTCC","aligned_b":"GGAAGTATCTTTTCGGCTCTAGTGA-CCAT--","edit_distance":20,"within_threshold":true},"family":"reverse_complement","fingerprint":"c60187b97448e8239fff740732234ad197707280afdbe49d36bac71cfbae76f3","group_id":"9553a3bdc04a17aaf8fe1c92a235e8dd758e49265e21db8ca80abb6164c593b7","id":"ALIGN-0004779","index":4779,"input":{"a":"ATGGTCACTAGAGCCGAAAAGATACTTCC","b":"GGAAGTATCTTTTCGGCTCTAGTGACCAT","source_sequence":"ATGGTCACTAGAGCCGAAAAGATACTTCC","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGAAT-ACCAATAGATTGCCGGACT","aligned_b":"CGGAATGACCAATAGATTCCCGGACT","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"98168dbbf258097853e2ba3f0bbdd315f2d0e984511bf90f1394bdc7ed111ffd","group_id":"70c4e787fe9247586fe397e6370abf72eeedecf14a61abb6e15ef9a196f16d2b","id":"ALIGN-0004817","index":4817,"input":{"a":"CGGAATACCAATAGATTGCCGGACT","b":"CGGAATGACCAATAGATTCCCGGACT","source_sequence":"CGGAATACCAATAGATTGCCGGACT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CC-TCGCGGTATTTTTTTTTTTTTTTTTCCCATGAAA","aligned_b":"CCATCGCGGTATTTTTTTTTTTTTTTTTCCCATGAAA","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"8216f322e196c59fe101fadb8d6c8a602833127a50455bf27c16b755269fc901","group_id":"8f3c77d90c8babf71abe19029053b6f10d2ae9ee20ba443cc2f1cacf61d55934","id":"ALIGN-0004825","index":4825,"input":{"a":"CCTCGCGGTATTTTTTTTTTTTTTTTTCCCATGAAA","b":"CCATCGCGGTATTTTTTTTTTTTTTTTTCCCATGAAA","source_sequence":"CCTCGCGGTATTTTTTTTTTTTTTTTTCCCATGAAA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TATTCCTGAGGCGGCGGCGGCGGCGGCGG-CATTAATAAT","aligned_b":"TATTCCTGAAGCGGCGGCGGCGGCGGCGGCCATTAATAAT","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"daee344520e90b928f63d9c7f7294bd4960e1310195d206210a3122300717e88","group_id":"be4d7843047b7c320e450a8d46876bf3aad46b98ae0e3955469e80a43e027635","id":"ALIGN-0004826","index":4826,"input":{"a":"TATTCCTGAGGCGGCGGCGGCGGCGGCGGCATTAATAAT","b":"TATTCCTGAAGCGGCGGCGGCGGCGGCGGCCATTAATAAT","source_sequence":"TATTCCTGAGGCGGCGGCGGCGGCGGCGGCATTAATAAT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGAGGCAATTGGGGGGGGGGGGTTTGCGC-GCG","aligned_b":"CGAGGCAATT-GGGGGGGGGGGTTTGCGCAGCG","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"47d3825dc4dd1195ee6d3893ddb8abd994cf616e999a41945d921fad76a771ec","group_id":"a671e00191ba70a94171339be87c956f345a3f379f1dc31713d666748c2acce3","id":"ALIGN-0004830","index":4830,"input":{"a":"CGAGGCAATTGGGGGGGGGGGGTTTGCGCGCG","b":"CGAGGCAATTGGGGGGGGGGGTTTGCGCAGCG","source_sequence":"CGAGGCAATTGGGGGGGGGGGGTTTGCGCGCG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAAACCGCTGCCCCCCCCCCCGAGGGCCGGA","aligned_b":"CAAACCGCT-CCCCCCCCCACGAGGGCCGGA","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"7bddbacd054974fb680b0fab4887926c0b3525e60c69bc70ee44f48169d2245b","group_id":"369d0c8da5c1ac4269cab431057721902a0ff9780bcd8ee065049ec23cfadbd5","id":"ALIGN-0004835","index":4835,"input":{"a":"CAAACCGCTGCCCCCCCCCCCGAGGGCCGGA","b":"CAAACCGCTCCCCCCCCCACGAGGGCCGGA","source_sequence":"CAAACCGCTGCCCCCCCCCCCGAGGGCCGGA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTTGCGCATAAGAGTGGGTTGCGCCTACATCTCAAACTTATACT","aligned_b":"GGTAGCGCATAAAAGTGGGTTGCGCCTACATCTC-AACTTATACT","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"97bf00fe84c01540017d815dfe4091de467f4457f9e011b63ef1cb9464355d10","group_id":"e6e6f117809fbc81926e7799bfadb7a183c4680108483285cdc32360fe7c6139","id":"ALIGN-0004847","index":4847,"input":{"a":"GGTTGCGCATAAGAGTGGGTTGCGCCTACATCTCAAACTTATACT","b":"GGTAGCGCATAAAAGTGGGTTGCGCCTACATCTCAACTTATACT","source_sequence":"GGTTGCGCATAAGAGTGGGTTGCGCCTACATCTCAAACTTATACT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCTTCACTANNGTTGATGCCAATACGGC","aligned_b":"TTCGTCACTA-NGTTCGTGCCAATACGGC","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"b4cb75a528763c0433220c24177a8eeac78f49afec41317c429675cea2c0ee81","group_id":"10cb51310903fae9b1857e862aeea78097d638a56767745f93b2bf37c10ea31b","id":"ALIGN-0004848","index":4848,"input":{"a":"TTCTTCACTANNGTTGATGCCAATACGGC","b":"TTCGTCACTANGTTCGTGCCAATACGGC","source_sequence":"TTCTTCACTANNGTTGATGCCAATACGGC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TA-AGCCATTGGGGGGGGGGGGGGG-GGGGATCTCCAG","aligned_b":"TACAGCCATTGGGGGGGGGGGGGGGCGGGGATCTCCAG","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"5297a2024fafdcc8bf5383d8ff737e552a8355a488d681716a0e176a0cf4e0ad","group_id":"6bd83b4dd6384e0f4091211b28122a8b09d438fdc58574159891af7464d5c568","id":"ALIGN-0004851","index":4851,"input":{"a":"TAAGCCATTGGGGGGGGGGGGGGGGGGGATCTCCAG","b":"TACAGCCATTGGGGGGGGGGGGGGGCGGGGATCTCCAG","source_sequence":"TAAGCCATTGGGGGGGGGGGGGGGGGGGATCTCCAG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--GCAACAAT--TAGTCCCTCGATTTCTCGCGGCGTTGGGAATGGGCAT","aligned_b":"ATGC-CCATTCCCAACGCCGCGAGAAATCGAGG-G--ACTAATTGTTGC","edit_distance":28,"within_threshold":true},"family":"reverse_complement","fingerprint":"f10b5f29c88b44ab9a68991719d600f0cafd97f6f15534e2ca8032a7580f1576","group_id":"67fb1d01deb6af2d5c4256f6969580dfe1ae045cf92e376ca8ea94d26c6e3c6a","id":"ALIGN-0004874","index":4874,"input":{"a":"GCAACAATTAGTCCCTCGATTTCTCGCGGCGTTGGGAATGGGCAT","b":"ATGCCCATTCCCAACGCCGCGAGAAATCGAGGGACTAATTGTTGC","source_sequence":"GCAACAATTAGTCCCTCGATTTCTCGCGGCGTTGGGAATGGGCAT","threshold":28},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGCAATTAANNTTCGTCCTGAATT","aligned_b":"GCGCAATT-NNNTTCG-GCTGAATT","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"9966f88cf4a9fb1cc1bbbc8be1e8442f50fa20546c5bf3cec1e63c723df8803d","group_id":"bf37b6c95077b751fcc62621abdfde0f8679cf3a4c64da699b6a9eb1656f3200","id":"ALIGN-0004898","index":4898,"input":{"a":"GCGCAATTAANNTTCGTCCTGAATT","b":"GCGCAATTNNNTTCGGCTGAATT","source_sequence":"GCGCAATTAANNTTCGTCCTGAATT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCCCGTTGGG-AACAACTGTA-CA-TA-G","aligned_b":"AGCCCGTTGGGTAAC-ACTGTATCATTATG","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"8f81034e03cbaa604b401dbc565dc63da217189d1141a9b2620df878510e9929","group_id":"eecf0879f669b7ae2ff88a40866a167622fd45bd6e8fdfb95924a168579a8276","id":"ALIGN-0004917","index":4917,"input":{"a":"AGCCCGTTGGGAACAACTGTACATAG","b":"AGCCCGTTGGGTAACACTGTATCATTATG","source_sequence":"AGCCCGTTGGGAACAACTGTACATAG","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTATATGATTNNCGGAAATTAACTCGT","aligned_b":"TTATGCGATTNNCGGAAAGTAACTCGT","edit_distance":3,"within_threshold":false},"family":"literal_N","fingerprint":"d1a31fc573ab678233a837cba14723894e0956b3cd4faab8beaa664ec187ee67","group_id":"27851ca90876ee0e1f28359d2a4e6256658d131daa8fab74279f5c9497da3c05","id":"ALIGN-0004953","index":4953,"input":{"a":"TTATATGATTNNCGGAAATTAACTCGT","b":"TTATGCGATTNNCGGAAAGTAACTCGT","source_sequence":"TTATATGATTNNCGGAAATTAACTCGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTAAT-AGGT-AGGGGGG-GGGGGGAACGT-GGCGC","aligned_b":"TTAATAAGGTCAGGGGGGTGGGGGGAACGTAGACGC","edit_distance":5,"within_threshold":true},"family":"homopolymer","fingerprint":"553ac5f16add7b3ebbf09c441944c344725c8c7ca321323f8acd441a39e2ba09","group_id":"03d9ead76b12799f576eb3b49392daf7079309a8cdbffacf97021739149070df","id":"ALIGN-0004955","index":4955,"input":{"a":"TTAATAGGTAGGGGGGGGGGGGAACGTGGCGC","b":"TTAATAAGGTCAGGGGGGTGGGGGGAACGTAGACGC","source_sequence":"TTAATAGGTAGGGGGGGGGGGGAACGTGGCGC","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCACCCTCCANNGTATGGAGCGCGAAGACTGCCT","aligned_b":"CCACCCT-CA-NGTATGGAGCGCGAAGACTG-CT","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"8bf9f23ace1a595a2ed1404de19f9e8cb5ee6f1a8785264311f359d5fdc7fb24","group_id":"d2f96879d94ab661699c72abc2142e3577a653b33ce016069248fb5777ddaf3f","id":"ALIGN-0004958","index":4958,"input":{"a":"CCACCCTCCANNGTATGGAGCGCGAAGACTGCCT","b":"CCACCCTCANGTATGGAGCGCGAAGACTGCT","source_sequence":"CCACCCTCCANNGTATGGAGCGCGAAGACTGCCT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TG-AAAGATTAGTAGTAGTAGTAGTAGGTTCGGC","aligned_b":"TGTAAAGATTAGTAGTAGTAGTAGTAGGTTCGGC","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"1b0c7b43aeb490ed532c932169413f2a9d0084beb20cd147440787821b77b0b8","group_id":"d57d43e529b96c5c2d405bfc298d5c25d7039291d674ebab87a1f3feca4ba4b3","id":"ALIGN-0004966","index":4966,"input":{"a":"TGAAAGATTAGTAGTAGTAGTAGTAGGTTCGGC","b":"TGTAAAGATTAGTAGTAGTAGTAGTAGGTTCGGC","source_sequence":"TGAAAGATTAGTAGTAGTAGTAGTAGGTTCGGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACCGAAGCGCGGCTGCCCGTGAGACATCCTCCAAACGTGGTAC","aligned_b":"ACCGAAGCGCGGCTGCCCGTGATACATCCTCCAAACGTGGTAC","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"5812a0e9fcd64510fe0441bae8f3c4769bc11c78b3340423e24ae0fda768cd0e","group_id":"adaabbe557da8aadf50cd924555544e299156a28f2c85b48083c2eb2b3152a91","id":"ALIGN-0004972","index":4972,"input":{"a":"ACCGAAGCGCGGCTGCCCGTGAGACATCCTCCAAACGTGGTAC","b":"ACCGAAGCGCGGCTGCCCGTGATACATCCTCCAAACGTGGTAC","source_sequence":"ACCGAAGCGCGGCTGCCCGTGAGACATCCTCCAAACGTGGTAC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTATTCGACGGC-GGCGGC-GGCGG-CCCAAGGGC","aligned_b":"TGTATTCGACGGCGGGCGGCACGCGGCCCCAAGGGC","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"c4b79f25eed9a576fa5f6ab037017bbaad4d96ed8b11b19a0bacd66569f8dcd2","group_id":"7a153a7b6844c81dcf9e6d03869e086c48178f74eaae25aa075246b6a94579b8","id":"ALIGN-0004986","index":4986,"input":{"a":"TGTATTCGACGGCGGCGGCGGCGGCCCAAGGGC","b":"TGTATTCGACGGCGGGCGGCACGCGGCCCCAAGGGC","source_sequence":"TGTATTCGACGGCGGCGGCGGCGGCCCAAGGGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGTTGCAAGN-NCCCATCTAGCTCGATCACATTCTCGAGCAGGCT","aligned_b":"CAGTTGCAAGNCNCCCATCTAGCTCGATCACATTCTCGAGCAGGCT","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"a75e3883f07801df4d673d38491f03942a6a0da8cc5db5c8cc0fb0beeddf64ed","group_id":"60088ec1323b6ac33965340c1b9862be09b7ae2b17df36bd3dee1e4da2283751","id":"ALIGN-0004988","index":4988,"input":{"a":"CAGTTGCAAGNNCCCATCTAGCTCGATCACATTCTCGAGCAGGCT","b":"CAGTTGCAAGNCNCCCATCTAGCTCGATCACATTCTCGAGCAGGCT","source_sequence":"CAGTTGCAAGNNCCCATCTAGCTCGATCACATTCTCGAGCAGGCT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATATCGCTATACTACTACTACTACAGTCAATAC","aligned_b":"ATAT-GCTATACTA-AACTACTACAGTCAATAC","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"f4365c8f01af1b2456985d59f9165d971f441046363927066ab50a6c9bb52685","group_id":"39b00ecf31e3810d08aa5265639cce9e3f05c166469b0ba02f94e824dc247952","id":"ALIGN-0004991","index":4991,"input":{"a":"ATATCGCTATACTACTACTACTACAGTCAATAC","b":"ATATGCTATACTAAACTACTACAGTCAATAC","source_sequence":"ATATCGCTATACTACTACTACTACAGTCAATAC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TGAGCGGTGGCTCGACCAGCATCACCTTAAGCGTGG","aligned_b":"TTAAGCGGTGGCCCGACCAGAATCATCTTAAGCGTGG","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"399a19cf11d565d8b3bba99a4b31772fafc37648c696dd520b1832d6efd961ae","group_id":"d0e8dd5dbcf82820f817b682c514b5cebb7d54387b03afe963ca0c93e0353ec8","id":"ALIGN-0004992","index":4992,"input":{"a":"TGAGCGGTGGCTCGACCAGCATCACCTTAAGCGTGG","b":"TTAAGCGGTGGCCCGACCAGAATCATCTTAAGCGTGG","source_sequence":"TGAGCGGTGGCTCGACCAGCATCACCTTAAGCGTGG","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTGCGGTCGGGG-GGGGGGGGGGGGGATAAGGATTA","aligned_b":"GTTGCGGTCGGGGAGGGGGGGGGGGGGGGTAGGATTA","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"a3fbcdcde8da4035e5753a37e59077b446dbfd47bc1ac96f9f309e399b1caf65","group_id":"f5c154d9cd6c684ab88f9e73ca32ef5da6d0875c5984b2d655d45bc786ab8397","id":"ALIGN-0004995","index":4995,"input":{"a":"GTTGCGGTCGGGGGGGGGGGGGGGGGATAAGGATTA","b":"GTTGCGGTCGGGGAGGGGGGGGGGGGGGGTAGGATTA","source_sequence":"GTTGCGGTCGGGGGGGGGGGGGGGGGATAAGGATTA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCGCACAGAA-GGGGGGGGGGGGGGAGCAATTCGC","aligned_b":"-TGCACAGAAGGGGGGGGGGGGGGGCGCAATTCGC","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"aeec8c6aeed68c673ed2f7f02ee4515941c57900b39643c0949d541e476d5c4d","group_id":"167c2d5d9f6ba90a66d1b7b664670f59f86b642b8c73b9761bd0565943849176","id":"ALIGN-0005010","index":5010,"input":{"a":"CCGCACAGAAGGGGGGGGGGGGGGAGCAATTCGC","b":"TGCACAGAAGGGGGGGGGGGGGGGCGCAATTCGC","source_sequence":"CCGCACAGAAGGGGGGGGGGGGGGAGCAATTCGC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCAGGGTGCACCCCCCCCCCCCCCCAGTGATGTCC","aligned_b":"CCAGGGTGCACCCCCCCCCCGCCCCATGGATGTCC","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"a1010e6a36b3def79be5e8afc54d3d758bfa9d43f8609c651d31e7778e16bec2","group_id":"0bc95b3db0c5139f55579caa8b9110ab3c29f057b70a8d70e945e7ff7896888b","id":"ALIGN-0005015","index":5015,"input":{"a":"CCAGGGTGCACCCCCCCCCCCCCCCAGTGATGTCC","b":"CCAGGGTGCACCCCCCCCCCGCCCCATGGATGTCC","source_sequence":"CCAGGGTGCACCCCCCCCCCCCCCCAGTGATGTCC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"T-AGT-GCCGCCAACAACAATAAGTT-GTG","aligned_b":"TCAGTGGCCGCCAACAACAATAAGTTGGTG","edit_distance":3,"within_threshold":false},"family":"tandem_repeat","fingerprint":"f83505272dd816800b53566a4f0d9752917bc133c5a1c9328a107faf42ad5bf8","group_id":"c16aa27b44f1ac653e2f0bea4550020ed5d25f2d5c4a6b2571b9062f98ca5b4c","id":"ALIGN-0005016","index":5016,"input":{"a":"TAGTGCCGCCAACAACAATAAGTTGTG","b":"TCAGTGGCCGCCAACAACAATAAGTTGGTG","source_sequence":"TAGTGCCGCCAACAACAATAAGTTGTG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGAAG-A-AACGCTGCCCATCCAGTTT","aligned_b":"GGAAGTATAACGCTGCCCATCCAGTTT","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"c9e6bc2100822fc84decb82a7c212f6066911f6a8291aa800451ed9f3f14b20f","group_id":"ba873ff55dc7eb068f06dfbeac979564b0750c7553743752e8d64a273350d3e2","id":"ALIGN-0005037","index":5037,"input":{"a":"AGAAGAAACGCTGCCCATCCAGTTT","b":"GGAAGTATAACGCTGCCCATCCAGTTT","source_sequence":"AGAAGAAACGCTGCCCATCCAGTTT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATTAGCTCGTAATCCGCCGCATGATAAGTTGGCGTTTAAACAACT","aligned_b":"ATTAGCTCGTAATCCGCCGCATGATAAGTTGGCGTTAAAACAACT","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"ea125c8ddb75c73c10a6a30e216136ace3d22829957d0735eca97a911cdd30fe","group_id":"477e6565a0a315a92170bfa014ad383e140fe90894df978e43f3791d80e33f70","id":"ALIGN-0005057","index":5057,"input":{"a":"ATTAGCTCGTAATCCGCCGCATGATAAGTTGGCGTTTAAACAACT","b":"ATTAGCTCGTAATCCGCCGCATGATAAGTTGGCGTTAAAACAACT","source_sequence":"ATTAGCTCGTAATCCGCCGCATGATAAGTTGGCGTTTAAACAACT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTGGCATTCNNGTTCGGACGTTGTTGCTGCAATTGGAGTAGAT-GGG","aligned_b":"GTTGGCATTCNNGTTCGGACGTTGTTGCTGCAATTGGAGTAGATCGGG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"a8dfbecf6107158a955ea894d2cac3813d200d6e21806915545c328a0c764b60","group_id":"23464dbb18fa39a48871ee8cd784b33566ac9d6888265778d2cff1fe50621a29","id":"ALIGN-0005058","index":5058,"input":{"a":"GTTGGCATTCNNGTTCGGACGTTGTTGCTGCAATTGGAGTAGATGGG","b":"GTTGGCATTCNNGTTCGGACGTTGTTGCTGCAATTGGAGTAGATCGGG","source_sequence":"GTTGGCATTCNNGTTCGGACGTTGTTGCTGCAATTGGAGTAGATGGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCCCGCTTGCA--AAAAAAAAAGGACGTGCGA","aligned_b":"CCCCGCTTGCATTAAATAAAAAGGACGTGCGA","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"3a4fc2135976bd045e5363dcaf0084122f00da858d08dddcd8ce55493008974a","group_id":"c540886b17da71fe3512661b6d5a8b13b8273d030880a2f3b6c6d467f974fde6","id":"ALIGN-0005065","index":5065,"input":{"a":"CCCCGCTTGCAAAAAAAAAAGGACGTGCGA","b":"CCCCGCTTGCATTAAATAAAAAGGACGTGCGA","source_sequence":"CCCCGCTTGCAAAAAAAAAAGGACGTGCGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATAGTGAGGCGGGGGGGGGGGGAAAACATTC","aligned_b":"AT-GTGAGGCGGGGGGTGTGGGAAAAC-TTC","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"d8214272f08ffe05487bd2ee4521bce09ab795523c88051ad26149094c88984c","group_id":"fc22e4d7b1b26919f3fe1247e541583ad9d406e2672680cc451e28fa4edcd9a6","id":"ALIGN-0005070","index":5070,"input":{"a":"ATAGTGAGGCGGGGGGGGGGGGAAAACATTC","b":"ATGTGAGGCGGGGGGTGTGGGAAAACTTC","source_sequence":"ATAGTGAGGCGGGGGGGGGGGGAAAACATTC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTAAAAGTGTTCTTGTCATTAGTGGAGTGATTCTCT-TACCC","aligned_b":"TGTGAAAGTGTTCTTGTCATTAGTGGAGTGATTCTCTGTACCC","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"9e903a0b8e11084aaebe0ed55fc0cffa545d67d59e38b90622a9ca6e5161d9f5","group_id":"15946cc592ed425b1f47512eeb7aa42e4f74ae200089eb9e751c71d91d2f8740","id":"ALIGN-0005087","index":5087,"input":{"a":"TGTAAAAGTGTTCTTGTCATTAGTGGAGTGATTCTCTTACCC","b":"TGTGAAAGTGTTCTTGTCATTAGTGGAGTGATTCTCTGTACCC","source_sequence":"TGTAAAAGTGTTCTTGTCATTAGTGGAGTGATTCTCTTACCC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTCAGTAGCGGCTCTCGTT-CGGGGTAACG-TCGGATTTTCT-A-","aligned_b":"-T-AG-AAAATCCGACGTTACCCCG-AACGAGAGCCGCTACTGAC","edit_distance":25,"within_threshold":false},"family":"reverse_complement","fingerprint":"9d14ac581765dd106eeb95f5a02812b50840f83410b766cbc309a9a8c52d5f3b","group_id":"6bb3e9cd13dab85741cf3f3c32c97414c083df0a62a352abaac7ddc66fcdd674","id":"ALIGN-0005094","index":5094,"input":{"a":"GTCAGTAGCGGCTCTCGTTCGGGGTAACGTCGGATTTTCTA","b":"TAGAAAATCCGACGTTACCCCGAACGAGAGCCGCTACTGAC","source_sequence":"GTCAGTAGCGGCTCTCGTTCGGGGTAACGTCGGATTTTCTA","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCATCTCCCAGGAGGAGGAGGCTGTTAGCC","aligned_b":"-CATCTCCCACGAGGAGGAGGCTGTTAGGC","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"e335b2e72c04ba049c17167ef1aae52b89b33174374152ff75d8e100d596de75","group_id":"6436939931c27b757e0f6c8fb75f99255afe8eeb8419b733eefde3fbb75160c0","id":"ALIGN-0005096","index":5096,"input":{"a":"GCATCTCCCAGGAGGAGGAGGCTGTTAGCC","b":"CATCTCCCACGAGGAGGAGGCTGTTAGGC","source_sequence":"GCATCTCCCAGGAGGAGGAGGCTGTTAGCC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCATG-CGCGCTACTACTACTAGCGCACAGT","aligned_b":"G-ATGCCGCGCT-CTACTACTAGCGCACAGT","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"b4a11058ea49dc4b5d68d6fba6e1d111807fb7d53f33a2955f3412b95fe76492","group_id":"d4f5e607c222fda74bcb6995a3e13321c33f607b7a8d03f7f68f6bed551ab120","id":"ALIGN-0005106","index":5106,"input":{"a":"GCATGCGCGCTACTACTACTAGCGCACAGT","b":"GATGCCGCGCTCTACTACTAGCGCACAGT","source_sequence":"GCATGCGCGCTACTACTACTAGCGCACAGT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACACGAGCTCGCGGAGTTACGGC-AT-TTATTACAT","aligned_b":"ACACGAGCTCGCGGAGTTACGGCGATGTTATTACAT","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"3440dfdd7c1eace1b8fadc6d391f2807f0c9d3ec1023f6f20f0c33d967de11bf","group_id":"4690a839fa6323f7785d92dc598f6b4d515a7ceb94023bd2d9b2d25d50c38ba8","id":"ALIGN-0005117","index":5117,"input":{"a":"ACACGAGCTCGCGGAGTTACGGCATTTATTACAT","b":"ACACGAGCTCGCGGAGTTACGGCGATGTTATTACAT","source_sequence":"ACACGAGCTCGCGGAGTTACGGCATTTATTACAT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCGATGAGCA-AAAAAAAAAAAAAGAGCAACCAG","aligned_b":"CCGATGAGCATAAAAAAAAAAAACAATCAACCAG","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"757245fc503331535e7c70e764fa920234590b81e47a1493af5dad09411031cd","group_id":"d2a2aa6b3d3845433cfaa6ab86d80c70795d2e9adc539e908de7fdfc09a261ec","id":"ALIGN-0005130","index":5130,"input":{"a":"CCGATGAGCAAAAAAAAAAAAAAGAGCAACCAG","b":"CCGATGAGCATAAAAAAAAAAAACAATCAACCAG","source_sequence":"CCGATGAGCAAAAAAAAAAAAAAGAGCAACCAG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTCTAAT-ACTACAAAGTGTTC-CGTCGTTGTGATT-GGC","aligned_b":"G-CCAATCACAACGACG-GAACACTTTGTAGT-ATTAGAC","edit_distance":16,"within_threshold":false},"family":"reverse_complement","fingerprint":"3427c7a4f775d36c600f46c4ccf8090c0b51470522c7d87f67f9adf683afc0f5","group_id":"ba8749a5edd8ef990059fd4328eb464149390f90dd1dd9c4a5d751ffd6eb70ca","id":"ALIGN-0005159","index":5159,"input":{"a":"GTCTAATACTACAAAGTGTTCCGTCGTTGTGATTGGC","b":"GCCAATCACAACGACGGAACACTTTGTAGTATTAGAC","source_sequence":"GTCTAATACTACAAAGTGTTCCGTCGTTGTGATTGGC","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATTAGGAGTANNAGAAAAGACCAGCAAGCAAAACCTGAACCTGCACGAC","aligned_b":"ATTACGAGTANNAGAAAAGACCAGCAAGCAAAA-CTGAACCTGCACGAC","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"38ad7de3d7dee56d0f2324aa4ad3ed8b83032e4e11684acda4399730f24efb2d","group_id":"87b0786712af298afe3753cbafd5d70302d04cac33bec35fe355e7fb8cbfc28f","id":"ALIGN-0005163","index":5163,"input":{"a":"ATTAGGAGTANNAGAAAAGACCAGCAAGCAAAACCTGAACCTGCACGAC","b":"ATTACGAGTANNAGAAAAGACCAGCAAGCAAAACTGAACCTGCACGAC","source_sequence":"ATTAGGAGTANNAGAAAAGACCAGCAAGCAAAACCTGAACCTGCACGAC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATCTCTCGATGGTCGGAAAGTT-CTACGCT-TTG-G-T","aligned_b":"A-C-C-AAAGCGT-AGAACTTTCCGACCATCGAGAGAT","edit_distance":20,"within_threshold":true},"family":"reverse_complement","fingerprint":"77e547356f72ee90f06af48175b2010215d3e7ff45ffcdef77566d3e9937604b","group_id":"51444385c064d0c4e36ad7161533413687694c0012cf342e38994f13cd21922f","id":"ALIGN-0005164","index":5164,"input":{"a":"ATCTCTCGATGGTCGGAAAGTTCTACGCTTTGGT","b":"ACCAAAGCGTAGAACTTTCCGACCATCGAGAGAT","source_sequence":"ATCTCTCGATGGTCGGAAAGTTCTACGCTTTGGT","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGCCAGAATCCCCCCCCCCCCCCCCAAAACATTTA","aligned_b":"AGGCCAG-A--CTCCCCCCCCCCCCCAAAACATTTA","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"e9ce9279daac369b648f6f80baa73c06291dd7e5945949800c831d6cc1ba30df","group_id":"8d01baf18f1158216138c26af5dd74b6bc5fcf094c1ef68662c39c177cd9e289","id":"ALIGN-0005165","index":5165,"input":{"a":"AGGCCAGAATCCCCCCCCCCCCCCCCAAAACATTTA","b":"AGGCCAGACTCCCCCCCCCCCCCAAAACATTTA","source_sequence":"AGGCCAGAATCCCCCCCCCCCCCCCCAAAACATTTA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-CTTTTCTGGTGCTGCTGCAGATAGATG","aligned_b":"CCTTTTCTGGAGCTGCTGCAGATAGA-G","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"c79700e4b6a4b015e1f366ef92bd1c97fcbfc114e827741cb7e8d012b5ea5f1b","group_id":"438d18ed0a2d8f023294ea6fbca388728b31eb2f44d50e009c66e7900ef9de23","id":"ALIGN-0005176","index":5176,"input":{"a":"CTTTTCTGGTGCTGCTGCAGATAGATG","b":"CCTTTTCTGGAGCTGCTGCAGATAGAG","source_sequence":"CTTTTCTGGTGCTGCTGCAGATAGATG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTACTTCACT-NNAGACTTTGTGAATGAAAGT","aligned_b":"CTACTTCTTTCNNAGACTTTGTGAATGAAAGT","edit_distance":3,"within_threshold":false},"family":"literal_N","fingerprint":"be8a145834290a4fce380080c115b06d5acc96a99694dbe40e4657ec5f575dd1","group_id":"3d7ec0ebdb9cac3b8121774edcd6db99e5ab7314eac5da82025d53722b1406f2","id":"ALIGN-0005193","index":5193,"input":{"a":"CTACTTCACTNNAGACTTTGTGAATGAAAGT","b":"CTACTTCTTTCNNAGACTTTGTGAATGAAAGT","source_sequence":"CTACTTCACTNNAGACTTTGTGAATGAAAGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACAGGACCGCCCGCACC-TACTGGGTTGGGGATATAGGGGGGTCTTTC","aligned_b":"ACAGGACCGCCCGCACCTTACTGGGTTGGGGATAT-GGGGGGTCTCTC","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"c4f5d70232fe071bf3097550bed462c3360ea2becc2e0dd17981a10ac4eeb730","group_id":"d5dc9723a84d1f434bb907c53573fd47c003a9be8921d39f5dded91f7ea58940","id":"ALIGN-0005212","index":5212,"input":{"a":"ACAGGACCGCCCGCACCTACTGGGTTGGGGATATAGGGGGGTCTTTC","b":"ACAGGACCGCCCGCACCTTACTGGGTTGGGGATATGGGGGGTCTCTC","source_sequence":"ACAGGACCGCCCGCACCTACTGGGTTGGGGATATAGGGGGGTCTTTC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGGGATGTCAACAACAACAACAATAGTAAGAC","aligned_b":"CTGGGATGTC-ACAACAACAAC-ATAGCTAGAC","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"a40a7caae7cd7a38695b1df6819e2ca00a53f61e8f5645e13bd225ba0761afcc","group_id":"9b13f4c91cb2ea36e53c611322b6161d12c681c7dce446331849fe4efc09fb5c","id":"ALIGN-0005216","index":5216,"input":{"a":"CTGGGATGTCAACAACAACAACAATAGTAAGAC","b":"CTGGGATGTCACAACAACAACATAGCTAGAC","source_sequence":"CTGGGATGTCAACAACAACAACAATAGTAAGAC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGATTAATTTTGATGCGGTGGATATATTCAATTAGC","aligned_b":"AGGATTAATTTTGATGCGGTGGATAT-TTCAATTAGC","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"9b917bfa3528b07d89abbc4ae9704a0b4719ed2d16827e74b89c54f6bee902aa","group_id":"182ecd4f0ac8afc82cb9d44db89acf77fc8f664518cfc146103b8d63d44da7ea","id":"ALIGN-0005217","index":5217,"input":{"a":"AGGATTAATTTTGATGCGGTGGATATATTCAATTAGC","b":"AGGATTAATTTTGATGCGGTGGATATTTCAATTAGC","source_sequence":"AGGATTAATTTTGATGCGGTGGATATATTCAATTAGC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--TACGGCGATGTC-A-TATCCG-AAGTTTGCCGATAGTTGATA-CGTC-TACC","aligned_b":"GGTA-GACG-TATCAACTATCGGCAAACTT-CGGATA--TGACATCGCCGTA--","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"f4480b1a1a256255a8644411ed745c2435cf715cac19109fa9fa789be6cbe430","group_id":"43a89bdb2e09cd60b68813ab463df1aedea47e92a6e18a326b7fd1158a0fad3f","id":"ALIGN-0005229","index":5229,"input":{"a":"TACGGCGATGTCATATCCGAAGTTTGCCGATAGTTGATACGTCTACC","b":"GGTAGACGTATCAACTATCGGCAAACTTCGGATATGACATCGCCGTA","source_sequence":"TACGGCGATGTCATATCCGAAGTTTGCCGATAGTTGATACGTCTACC","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGAGTTTG-ACNNGAAATCATGCCCTCACCTTTGGGGATTGCACATAATA","aligned_b":"CGAGTTTGAACNNGAAA-CATGCCCTCACCTTTGGGGCTTGCACATAATA","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"52852400e2b7b4fa1aa63f02737b5e930f39a290a7b302059e48b84359e483b7","group_id":"b73e3501dedaf894ee15a38ec82c0fae2e3fdd29b4e3f0236570517698b32e4f","id":"ALIGN-0005233","index":5233,"input":{"a":"AGAGTTTGACNNGAAATCATGCCCTCACCTTTGGGGATTGCACATAATA","b":"CGAGTTTGAACNNGAAACATGCCCTCACCTTTGGGGCTTGCACATAATA","source_sequence":"AGAGTTTGACNNGAAATCATGCCCTCACCTTTGGGGATTGCACATAATA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGAATAGCTCTTTTTTTTTTCGTCGACATT","aligned_b":"CGAATAGCTCTTTTTATTTTCGTCGACATT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"e4a0a264ae368072336a21ef3dc6f30dd1543e5508ddfe3500f2db2ad16cfc16","group_id":"a3eded7f3f785978224f8547bd8e3be8dc53cc26f6d4b815a0d3052a0401c5e8","id":"ALIGN-0005240","index":5240,"input":{"a":"CGAATAGCTCTTTTTTTTTTCGTCGACATT","b":"CGAATAGCTCTTTTTATTTTCGTCGACATT","source_sequence":"CGAATAGCTCTTTTTTTTTTCGTCGACATT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TGCCCAAGAAATTCGAATAATGTGGGTATAATGCGGGTTT","aligned_b":"AAACCCGCATTATACCCACATTATTCGAAT-TTCTTGGGCA","edit_distance":25,"within_threshold":false},"family":"reverse_complement","fingerprint":"2eea7d8327f1f19def46b2f0dc904349580f96762934a9964eec96a26b4a4eda","group_id":"ca140737891d48312d123a01a91e8eefe9d3dbaf692add17aff52c14fd9a1345","id":"ALIGN-0005259","index":5259,"input":{"a":"TGCCCAAGAAATTCGAATAATGTGGGTATAATGCGGGTTT","b":"AAACCCGCATTATACCCACATTATTCGAATTTCTTGGGCA","source_sequence":"TGCCCAAGAAATTCGAATAATGTGGGTATAATGCGGGTTT","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATCCCTCTC-ATCGTACTCCTGGTCAGCGATGTAGC","aligned_b":"ATCCCTCTCAATCGTACTCCTGGT-AGCGATGTAGC","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"f6952ca2953a24faf876de5de86c28b0a968afa9803ff698c84c8f710136a197","group_id":"5ab9e93d2f406e4d58c2c16f15724542bc01c4615dd1f67b22b3644154716e85","id":"ALIGN-0005262","index":5262,"input":{"a":"ATCCCTCTCATCGTACTCCTGGTCAGCGATGTAGC","b":"ATCCCTCTCAATCGTACTCCTGGTAGCGATGTAGC","source_sequence":"ATCCCTCTCATCGTACTCCTGGTCAGCGATGTAGC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGTG-CGGTTAGGGAGGGACCCCC","aligned_b":"GGGGGTCCCTCCCTAACCG-CACTG","edit_distance":17,"within_threshold":true},"family":"reverse_complement","fingerprint":"0db8307a875c5b05fefa04c8af88fdb3a31fa8fe0d9308038b947d141c0479ee","group_id":"1a46fcddb21539882fcadc30069a5d670891ac47b386050ace5dd2a874589506","id":"ALIGN-0005274","index":5274,"input":{"a":"CAGTGCGGTTAGGGAGGGACCCCC","b":"GGGGGTCCCTCCCTAACCGCACTG","source_sequence":"CAGTGCGGTTAGGGAGGGACCCCC","threshold":18},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATCGATGCAGTA-GTAGTAGTAGTAGTAGTACCGTCTCAA","aligned_b":"ATCGATGCAGTACGTAGTAGTAGTAGTAGTACCGTCTCAA","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"752bf084c6823fa8ea7c747ec98054889084181fa30dda4f8e694c55c47c5626","group_id":"50e0a7677460efce8bd02e1427e39ff89bfa724c11c94793270cbe1c184202b6","id":"ALIGN-0005291","index":5291,"input":{"a":"ATCGATGCAGTAGTAGTAGTAGTAGTAGTACCGTCTCAA","b":"ATCGATGCAGTACGTAGTAGTAGTAGTAGTACCGTCTCAA","source_sequence":"ATCGATGCAGTAGTAGTAGTAGTAGTAGTACCGTCTCAA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCCAAGACCGNNCCTGCCCTG-GGATATCAGCCTGGCCTG","aligned_b":"TCGAAGACCGNNCCTGCCCTGAGGATATCAGCCTGNCCTG","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"711c0fee2703af43da8b216d47ec7b57511ec5ca67907f23d43d2571a51eb042","group_id":"d5fbd39f74a14e4633d12ba0cfe70ce1c9988333ef6eedba1bb2100c2db511cc","id":"ALIGN-0005293","index":5293,"input":{"a":"TCCAAGACCGNNCCTGCCCTGGGATATCAGCCTGGCCTG","b":"TCGAAGACCGNNCCTGCCCTGAGGATATCAGCCTGNCCTG","source_sequence":"TCCAAGACCGNNCCTGCCCTGGGATATCAGCCTGGCCTG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAGTA-GTA-CGNNTACAGCTGACCGGGATCGAAGCGTCCGCCTTGCTC","aligned_b":"AAGTACGTAGCGNNTACA-CTGACC-GGATCGAAGCGTCCGCC-TGCTC","edit_distance":5,"within_threshold":false},"family":"literal_N","fingerprint":"a2bc3a034b0587cd1efa0e439aa139f31c20c8c5ae07eca41b5f507b0b8fdc46","group_id":"f3fe3473c7e2861d3865f54f10101702ac8c2bd194cbb82e089db7a91d5960f6","id":"ALIGN-0005318","index":5318,"input":{"a":"AAGTAGTACGNNTACAGCTGACCGGGATCGAAGCGTCCGCCTTGCTC","b":"AAGTACGTAGCGNNTACACTGACCGGATCGAAGCGTCCGCCTGCTC","source_sequence":"AAGTAGTACGNNTACAGCTGACCGGGATCGAAGCGTCCGCCTTGCTC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGATGTCGGACCTTGCCATGACGGA-A---","aligned_b":"---T-TCCGTCATGGCAAGGTCCGACATCG","edit_distance":16,"within_threshold":true},"family":"reverse_complement","fingerprint":"c59700fa9e645b888ec2da1d37e490356dea8fce733666daa00ffb6f6e08b368","group_id":"8dcdd5696dd3074c83b7297fdb2bb675bff69afdc274220bff96ce2eae76d79d","id":"ALIGN-0005324","index":5324,"input":{"a":"CGATGTCGGACCTTGCCATGACGGAA","b":"TTCCGTCATGGCAAGGTCCGACATCG","source_sequence":"CGATGTCGGACCTTGCCATGACGGAA","threshold":17},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAAACTCGGTATTGGCCTACGATGTCTGATATCCGTCA","aligned_b":"TAAACTC-GTATTGGCCTACGATGTCTGATATCAGTCA","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"1193ccc3b652ef8427911189e2b6e30556b3ad2ea95d0bf1fd9cff365a20f865","group_id":"8dcb25c1916de0f7a745cc0b49a6b94aef6585c6d5916d22782ff775bb9a4464","id":"ALIGN-0005332","index":5332,"input":{"a":"TAAACTCGGTATTGGCCTACGATGTCTGATATCCGTCA","b":"TAAACTCGTATTGGCCTACGATGTCTGATATCAGTCA","source_sequence":"TAAACTCGGTATTGGCCTACGATGTCTGATATCCGTCA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGAACCGGTCTTTTTTTTTTGATTATCCT","aligned_b":"TGAACAGGTCTTTTTTTTTGGATTATCCC","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"029800e885df4d77cdaa3c179480e1dfa9408ddcef591e8ff86d0cf7a72971f9","group_id":"9606b8f9a82fa58d3e305ca3b609396af516c1c96482baadeb4d85bd63638053","id":"ALIGN-0005340","index":5340,"input":{"a":"TGAACCGGTCTTTTTTTTTTGATTATCCT","b":"TGAACAGGTCTTTTTTTTTGGATTATCCC","source_sequence":"TGAACCGGTCTTTTTTTTTTGATTATCCT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GACGCATGGTG-CCCAGCC-AGACTG","aligned_b":"GACGCATGGTGCCCCAGCCTAGACTG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"a5f50a5a2b1cc531bf5a03b18885c9122816323c35a8e69165f74fc09fa581db","group_id":"008fcb2bcdc78724cc58a025662225f85d79cff9ebcabfd5cd04525ecef11ed4","id":"ALIGN-0005342","index":5342,"input":{"a":"GACGCATGGTGCCCAGCCAGACTG","b":"GACGCATGGTGCCCCAGCCTAGACTG","source_sequence":"GACGCATGGTGCCCAGCCAGACTG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGAACTAATNNT-TACGCATGTTACTCTTATGTTAAGACCTGCATCGCCT","aligned_b":"CGGAACTAATNNTGTACGCATGTTACTCTTATGTTAAGACCTGCATCGCCT","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"1f252d81fed86cd5025e2b466ece43d24c6682ac4e63a5fd34308ed852e2d833","group_id":"0c0dd3495aae76587dacb2a44cfc5ee95dbab4c6be9819e7125c533b311acc05","id":"ALIGN-0005353","index":5353,"input":{"a":"CGGAACTAATNNTTACGCATGTTACTCTTATGTTAAGACCTGCATCGCCT","b":"CGGAACTAATNNTGTACGCATGTTACTCTTATGTTAAGACCTGCATCGCCT","source_sequence":"CGGAACTAATNNTTACGCATGTTACTCTTATGTTAAGACCTGCATCGCCT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCTGCGACTAAAAAAAAAAAGATACCTCAA","aligned_b":"CTCTCCGACTAAAAAAAAAAAGATA-CTCAA","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"ec7df403b38a9d57526e46c7d6786c8abb36341767baf81c75917da3e1778f78","group_id":"fde6cc57952d1e2043796574b80e9edba5cf8a6bbc27ab7eb5530c64c8d68f36","id":"ALIGN-0005360","index":5360,"input":{"a":"CTCTGCGACTAAAAAAAAAAAGATACCTCAA","b":"CTCTCCGACTAAAAAAAAAAAGATACTCAA","source_sequence":"CTCTGCGACTAAAAAAAAAAAGATACCTCAA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACTGGGGTGNNTCTCTTCTGTCAACCCTTTAGCTGTATC-TTTT","aligned_b":"AACT-GGGTGNNTCTCTTCTGTCAACCCTTTAGCTGTATCTTTTT","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"887db8997437c4c663f9f6ca9e0633f02d7a3c50dc2bba233550d0f2ec3a2dfe","group_id":"0f1548abdd2ac9c983749bd91bc609b381115df201f7040e7e090daf98db765c","id":"ALIGN-0005363","index":5363,"input":{"a":"AACTGGGGTGNNTCTCTTCTGTCAACCCTTTAGCTGTATCTTTT","b":"AACTGGGTGNNTCTCTTCTGTCAACCCTTTAGCTGTATCTTTTT","source_sequence":"AACTGGGGTGNNTCTCTTCTGTCAACCCTTTAGCTGTATCTTTT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TTGTTCTTAACTACTACTACTACTAAGACTTTG","aligned_b":"-TGTGCTTGACT-CTACTACTACTAAGACTTTG","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"4b55e90d7b57c18c02a972ba819e1362a802371b65eaac6925e192fdfc0f3706","group_id":"e5383e7f51e311edfda6b3881e766893830991f910ed0ebf270b5543739fe26a","id":"ALIGN-0005386","index":5386,"input":{"a":"TTGTTCTTAACTACTACTACTACTAAGACTTTG","b":"TGTGCTTGACTCTACTACTACTAAGACTTTG","source_sequence":"TTGTTCTTAACTACTACTACTACTAAGACTTTG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGACTCTTGGTAGTAGTAAAGCGATGC","aligned_b":"GGACTCTTAGTAGTAGTAAAGCGATGC","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"84982495ff1eaf129dbfd7f0234339dfcbc13be5f58eea4e4d08eff093fce4d3","group_id":"4d2f0acd1323ff516febf2cdb615a4b60fbb2e9999a266029729afbe57554fc8","id":"ALIGN-0005391","index":5391,"input":{"a":"GGACTCTTGGTAGTAGTAAAGCGATGC","b":"GGACTCTTAGTAGTAGTAAAGCGATGC","source_sequence":"GGACTCTTGGTAGTAGTAAAGCGATGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGAACGCG-TCGTCGTCGGAATTGTCC","aligned_b":"CAGAACGCGATCGTCGTCGGAATTGTCC","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"36007962aeb7de8c1a52a8ed62caf033809544849d8656358073c88a28e9439e","group_id":"e408fdcdd2ac3e994cee37c9b35b6bced5516aad58bc35ede8638abdf06d4197","id":"ALIGN-0005406","index":5406,"input":{"a":"CAGAACGCGTCGTCGTCGGAATTGTCC","b":"CAGAACGCGATCGTCGTCGGAATTGTCC","source_sequence":"CAGAACGCGTCGTCGTCGGAATTGTCC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTGTTGAAGGNNCCGCATAAGACTTCCAGTCCGACAACCA","aligned_b":"TTGTTGAAGGNNCCGCATAAGACTTGCAGTCCGACAACCA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"8ee4b86d2bebc678a9ea2119c4afac9db884e09f44a1282ba0ae685bf7cdd2b8","group_id":"c6d7d931015267db2389b3594441ddab64cbd3116e364825a249cc80a61fd826","id":"ALIGN-0005433","index":5433,"input":{"a":"TTGTTGAAGGNNCCGCATAAGACTTCCAGTCCGACAACCA","b":"TTGTTGAAGGNNCCGCATAAGACTTGCAGTCCGACAACCA","source_sequence":"TTGTTGAAGGNNCCGCATAAGACTTCCAGTCCGACAACCA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAAACCATGAAAAAAAAAAAAAATCCAGGGAA","aligned_b":"CAAACCATG-ATAAAAAAAAAAATCCAAGGAA","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"666e512c19cf6432b0265cec35e66c70bdeca6e8278feb96650ae8eea2d54e35","group_id":"1568935739a164a7a01b67d3bedc7012e199b48454c023dfbcc34e9b3eb93ab0","id":"ALIGN-0005450","index":5450,"input":{"a":"CAAACCATGAAAAAAAAAAAAAATCCAGGGAA","b":"CAAACCATGATAAAAAAAAAAATCCAAGGAA","source_sequence":"CAAACCATGAAAAAAAAAAAAAATCCAGGGAA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GCGATTTTAAGTAGTAGTAGTCCCCTTAAT","aligned_b":"AGCGATTTTAAGTAGTAGTAGTCCCCTTAAT","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"90e197b1c44799dfe12144fb0bcd1d65c937cf9a35459d8b04930b274cc349cc","group_id":"483546e5da81d013996c34784a2e2a48f815ab0155e1380f51da73dae6f35bd1","id":"ALIGN-0005451","index":5451,"input":{"a":"GCGATTTTAAGTAGTAGTAGTCCCCTTAAT","b":"AGCGATTTTAAGTAGTAGTAGTCCCCTTAAT","source_sequence":"GCGATTTTAAGTAGTAGTAGTCCCCTTAAT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCCACACTCCCC-CCCCCCCCCCCCAAATACCAGC","aligned_b":"-TCCACACTCCCCGCCCCCCCCCCCCAAATACCAG-","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"71c26cd761204e1ae652aea3eec457cd99f9f808b9630a9f51ee88dd11b79484","group_id":"9de5a78d3485a37b714d6ec98543baf78621221a48bf9a4339c8ab5de9badcbd","id":"ALIGN-0005465","index":5465,"input":{"a":"CTCCACACTCCCCCCCCCCCCCCCCAAATACCAGC","b":"TCCACACTCCCCGCCCCCCCCCCCCAAATACCAG","source_sequence":"CTCCACACTCCCCCCCCCCCCCCCCAAATACCAGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTACAGTGGACCTCCGCCGGAACGTACCACTATC","aligned_b":"GTATAGTGGACCTCCGCCGGAACGTACCACTATC","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"3c4da6ca812f6c9886efc336a30c6c146a6e924c132a9d8c47d64f2daf2e212a","group_id":"5a02b907ce20803bf32ce8d4ac120101fdc1b03becb8e0ca5017d4654fd85197","id":"ALIGN-0005492","index":5492,"input":{"a":"GTACAGTGGACCTCCGCCGGAACGTACCACTATC","b":"GTATAGTGGACCTCCGCCGGAACGTACCACTATC","source_sequence":"GTACAGTGGACCTCCGCCGGAACGTACCACTATC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGGC-GGGTCCCCCCCCCCCAAGTTGTTTT","aligned_b":"GCGGCGGGGTCCCCCCCCCCCAAGTTGTTTT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"69ce89419162ae97da5e33b8eefba135ca3685a3a89355786b808ee65a38e48a","group_id":"db43b2d736a11c908a922555422a3efdbd2e1860b7aa4aa27706c84d12db22c2","id":"ALIGN-0005500","index":5500,"input":{"a":"GCGGCGGGTCCCCCCCCCCCAAGTTGTTTT","b":"GCGGCGGGGTCCCCCCCCCCCAAGTTGTTTT","source_sequence":"GCGGCGGGTCCCCCCCCCCCAAGTTGTTTT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGCAGTCTGATGATGATGATGATGATGATCGGAGAACC","aligned_b":"CGG-AGTCTGATGACGATGATGATGATGATCGGAGAACC","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"0d7c4a0206430d3425ac6bf1d8622a692579a0019eab5ac69ad525a6bf333809","group_id":"7551d0ad7d83c14fafb8507c88100e6b91b503f1594b74b4cd3bac03b1207f0d","id":"ALIGN-0005506","index":5506,"input":{"a":"CGGCAGTCTGATGATGATGATGATGATGATCGGAGAACC","b":"CGGAGTCTGATGACGATGATGATGATGATCGGAGAACC","source_sequence":"CGGCAGTCTGATGATGATGATGATGATGATCGGAGAACC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTGTC-GCGCGTCAGTCCGGGCACAGGCCGGGTTCGG","aligned_b":"GTGTCGGCGCGTCAGTCCGGGCACAGGACCGTTTCGG","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"4b3cd85b7047dc8315fe96a0c8b2357e7c1e51aee7c7ce96eb7b48cc0137def1","group_id":"9e0c38350157802f55a0fec3d6667146c70b567e5452716370748de972aeba9c","id":"ALIGN-0005512","index":5512,"input":{"a":"GTGTCGCGCGTCAGTCCGGGCACAGGCCGGGTTCGG","b":"GTGTCGGCGCGTCAGTCCGGGCACAGGACCGTTTCGG","source_sequence":"GTGTCGCGCGTCAGTCCGGGCACAGGCCGGGTTCGG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTG-ATATTCNNTGGTTATAATGTCAGCGCATTCTGGCTGACCG","aligned_b":"TCTGAATATTCNNTGGTTATAATGTCAGCGCATTCTGGCTGACCG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"08c8a0452ff5e4691856b5be9dbf5838610f94f681b5ad0e55d5f5b6b0679f0d","group_id":"d2287e17cd09e67cf7811b8cf28fa1482ef2b03f4475ac093ade218d6bad539b","id":"ALIGN-0005513","index":5513,"input":{"a":"TCTGATATTCNNTGGTTATAATGTCAGCGCATTCTGGCTGACCG","b":"TCTGAATATTCNNTGGTTATAATGTCAGCGCATTCTGGCTGACCG","source_sequence":"TCTGATATTCNNTGGTTATAATGTCAGCGCATTCTGGCTGACCG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTGTCGCTATGACTAGCAGCACCTTTTTGATGC-CCCCGGACCTGC-C","aligned_b":"G-GCAGGTCCG-GGGGCATCAAAAAGGTGCTGCTAGTCATAGCGACAC","edit_distance":28,"within_threshold":true},"family":"reverse_complement","fingerprint":"ddb7e2ee7bb27019d8fd3f763999b0bdca45c6c72de72e4819a057e7b0f01372","group_id":"84cd949f2054281e602f65213202405540596aad4fc9f82c2158a017369cc94d","id":"ALIGN-0005514","index":5514,"input":{"a":"GTGTCGCTATGACTAGCAGCACCTTTTTGATGCCCCCGGACCTGCC","b":"GGCAGGTCCGGGGGCATCAAAAAGGTGCTGCTAGTCATAGCGACAC","source_sequence":"GTGTCGCTATGACTAGCAGCACCTTTTTGATGCCCCCGGACCTGCC","threshold":28},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TATGCGCAGTCCTCTTCGTACG--CCCTGTGCCAA","aligned_b":"TATGCGCAGTCCT-TTCGTACGCACCCTGTGCCAA","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"0b42d56426d4e247a5505c562debf251887859a8c52ffd4812610e061ebbdeaa","group_id":"ab5a16b59b3a501a8a1736fe21e30ccf1e9ae9342b0ee18585e1c2ffec1873ba","id":"ALIGN-0005517","index":5517,"input":{"a":"TATGCGCAGTCCTCTTCGTACGCCCTGTGCCAA","b":"TATGCGCAGTCCTTTCGTACGCACCCTGTGCCAA","source_sequence":"TATGCGCAGTCCTCTTCGTACGCCCTGTGCCAA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTGTCGTCANNTGTAGGGATCATC-TTATTC","aligned_b":"GTTGT-GTCANNTG-AGGGATCATCATTATTC","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"1a9c2fdef2a56c0555e072497c77670f1520bc3ed2bd284cc7ba07f998a1c6df","group_id":"698c969584b618e4ba5f593481a27638314eb3f31b40cf61648d7c4f690c0e1b","id":"ALIGN-0005518","index":5518,"input":{"a":"GTTGTCGTCANNTGTAGGGATCATCTTATTC","b":"GTTGTGTCANNTGAGGGATCATCATTATTC","source_sequence":"GTTGTCGTCANNTGTAGGGATCATCTTATTC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTTGCAACTCCCCCCCCCCCCCCCGATCCACGAG","aligned_b":"GTTTGCAACTCCGCCACCCCTCCCCGATACACGAG","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"38469e6b95a6538a4e342be8766d8e197277920f527e91cba1b29310620e46fb","group_id":"ef70a82d680fd0d2f2f66a56f107a3e2b25ae6566c52ee48704349ae46d3a371","id":"ALIGN-0005520","index":5520,"input":{"a":"GTTTGCAACTCCCCCCCCCCCCCCCGATCCACGAG","b":"GTTTGCAACTCCGCCACCCCTCCCCGATACACGAG","source_sequence":"GTTTGCAACTCCCCCCCCCCCCCCCGATCCACGAG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GACCTGGAGATCAATAGGC-AGGCAAAGACAAG-C","aligned_b":"G-CTTGTCTTTGCCT-GCCTATTGATCTCCAGGTC","edit_distance":21,"within_threshold":true},"family":"reverse_complement","fingerprint":"60db124f20482cdfab6e268885846ef4dfd931b06499e12fed13fc3c8bea0f43","group_id":"01bec9bb180c80389399250688cc8b6f74d18be6a831557190b512fe439f9d72","id":"ALIGN-0005539","index":5539,"input":{"a":"GACCTGGAGATCAATAGGCAGGCAAAGACAAGC","b":"GCTTGTCTTTGCCTGCCTATTGATCTCCAGGTC","source_sequence":"GACCTGGAGATCAATAGGCAGGCAAAGACAAGC","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCATGTTAGCTGGCAGACCGTCA-ATATGTCTG-CGG-CGTCCAATTAAGAT--","aligned_b":"--ATCTTAATTGG-ACGCCG-CAGACATAT-TGACGGTCTGCCAGCTAACATGC","edit_distance":22,"within_threshold":false},"family":"reverse_complement","fingerprint":"21e3803c407432e552c0168eee3893848a92458ce0d6a0a10debec18de9eda0a","group_id":"92178a11ec7313455c8f7e5ded678350c5cf332bd5e54b3f65d65fa7b7427ffc","id":"ALIGN-0005549","index":5549,"input":{"a":"GCATGTTAGCTGGCAGACCGTCAATATGTCTGCGGCGTCCAATTAAGAT","b":"ATCTTAATTGGACGCCGCAGACATATTGACGGTCTGCCAGCTAACATGC","source_sequence":"GCATGTTAGCTGGCAGACCGTCAATATGTCTGCGGCGTCCAATTAAGAT","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"T-TGTTCCTTGAGGAGGAGGAGGAGGAGGAGGCATCCACT","aligned_b":"TCTGTT-CTTGAGGAGGAGGAGGAGGAGGAGGCATCCACT","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"a78d9fdae159ac462579ef6b9f4f34b66dd28ea175b9c5c32b31be182f8a3d32","group_id":"0f96a86f73c85218daf86a09d494b9327b0df1b4a7217b5a94d3e97e53b014d7","id":"ALIGN-0005551","index":5551,"input":{"a":"TTGTTCCTTGAGGAGGAGGAGGAGGAGGAGGCATCCACT","b":"TCTGTTCTTGAGGAGGAGGAGGAGGAGGAGGCATCCACT","source_sequence":"TTGTTCCTTGAGGAGGAGGAGGAGGAGGAGGCATCCACT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATCCAG-CAAGNNCGCCCGACGTACC","aligned_b":"ATCCAGACAAGNNCGGCCGACGTAAC","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"08219ccb73c9e6781dcec14c0fe6bfb51f7934d2bfc86537766cde38fff9027f","group_id":"3a0dc1b9fa247413787e56c65dbb562e9f74c6f69f3c730b7b76a2e7ece03fb1","id":"ALIGN-0005553","index":5553,"input":{"a":"ATCCAGCAAGNNCGCCCGACGTACC","b":"ATCCAGACAAGNNCGGCCGACGTAAC","source_sequence":"ATCCAGCAAGNNCGCCCGACGTACC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--TCATCCCCGGTATCGACCGTGA-GCTTGGTGCATTTAAACACT","aligned_b":"AGTGTTTAAATGCACCAAGC-TCACGGTCGATACCGGGGATGA--","edit_distance":29,"within_threshold":true},"family":"reverse_complement","fingerprint":"0a103af62e405a11debff6ba6d4710844623edb047b4e62c46e463f8675972fb","group_id":"d3e6d97975ec590b53bcd44a8217f7e4e5373279f07e60ff61b52f88f9424884","id":"ALIGN-0005569","index":5569,"input":{"a":"TCATCCCCGGTATCGACCGTGAGCTTGGTGCATTTAAACACT","b":"AGTGTTTAAATGCACCAAGCTCACGGTCGATACCGGGGATGA","source_sequence":"TCATCCCCGGTATCGACCGTGAGCTTGGTGCATTTAAACACT","threshold":30},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AATCCCC-GATTTTTTTTTTTTTCCTATCGATT","aligned_b":"AATCCCCGGATTTATTATTTTTTCCTATCGATT","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"58ce8e6e0eba4a809ede1388d5f8c3755f2025550fe8ec20a39b802593ffc8fb","group_id":"7b7f3c1d2c4b1e65a44fd2da112cc043ce7829199469002777af9e627f40867f","id":"ALIGN-0005580","index":5580,"input":{"a":"AATCCCCGATTTTTTTTTTTTTCCTATCGATT","b":"AATCCCCGGATTTATTATTTTTTCCTATCGATT","source_sequence":"AATCCCCGATTTTTTTTTTTTTCCTATCGATT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-CG--CGACACGGGCGGGTAACCAGCGCTAATAGAACGC","aligned_b":"GCGTTCTATTAGCGCTGGTTACCCGCCCGTGTCG--CG-","edit_distance":19,"within_threshold":false},"family":"reverse_complement","fingerprint":"b540fab3ecdbea0f2e589ed8cb25bff611b9a2cd66131ff0a1a8c0c175976263","group_id":"bb1d933d07dfebf20df4588fd028f6edb7d0c79ba981c8dbda70995cf2a711f2","id":"ALIGN-0005584","index":5584,"input":{"a":"CGCGACACGGGCGGGTAACCAGCGCTAATAGAACGC","b":"GCGTTCTATTAGCGCTGGTTACCCGCCCGTGTCGCG","source_sequence":"CGCGACACGGGCGGGTAACCAGCGCTAATAGAACGC","threshold":18},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACTACAGTAACCCCGCCCGGCGTAAATAAATTC-TTTTCACTCTAAAC","aligned_b":"GTTTAGAGTGA-AAAGAATTTATTTACGCCGGGCGGGGTTACTGTAGTA","edit_distance":33,"within_threshold":true},"family":"reverse_complement","fingerprint":"039d3c886b466441c0e23857c303ec22009d5d52c96dbedd5011742278e4c091","group_id":"921bc8f174721556569ba73dc296d91e1fcd6939036fbeb74be988e1dc2cfa25","id":"ALIGN-0005589","index":5589,"input":{"a":"TACTACAGTAACCCCGCCCGGCGTAAATAAATTCTTTTCACTCTAAAC","b":"GTTTAGAGTGAAAAGAATTTATTTACGCCGGGCGGGGTTACTGTAGTA","source_sequence":"TACTACAGTAACCCCGCCCGGCGTAAATAAATTCTTTTCACTCTAAAC","threshold":33},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTATCTACGGTTTTTTTTTTTTTTTTAACTTAGGGC","aligned_b":"CTATCTACGGTTTTTATTTGTTTTTTAAC-TAGGGC","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"d7e8fd0a1b5324ab59a76eaeed3d97dbcc7de78683a4746c627b1290be2a57f4","group_id":"fa561539d3a710775c291b2fba9681db0d284fe893ba90f34a5a8153ec840c96","id":"ALIGN-0005600","index":5600,"input":{"a":"CTATCTACGGTTTTTTTTTTTTTTTTAACTTAGGGC","b":"CTATCTACGGTTTTTATTTGTTTTTTAACTAGGGC","source_sequence":"CTATCTACGGTTTTTTTTTTTTTTTTAACTTAGGGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-CATATACTTAATCAATGGACCATGTGGCCAGGTAGGATTGAG","aligned_b":"GCATATACTTAATCAATGGACCATGTGGCCAGGTAGGATTGAG","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"0a05246058e3e658d9aaee93b09e9b606d0461aea5987d232e95c3025cb5f461","group_id":"5a99eecb8a13a4687ec359d2eb29d5f4722a51e3861ceff296c7f0e2ad982d19","id":"ALIGN-0005602","index":5602,"input":{"a":"CATATACTTAATCAATGGACCATGTGGCCAGGTAGGATTGAG","b":"GCATATACTTAATCAATGGACCATGTGGCCAGGTAGGATTGAG","source_sequence":"CATATACTTAATCAATGGACCATGTGGCCAGGTAGGATTGAG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACTGCTACGGNNATACAGAAT-AC-AACGTCTTCATGCCCG","aligned_b":"ACTGCTACGGNNACACAGAATCACAAACGTCTTCA-GCCCG","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"92efef75790ed2057099a5138be449dbede1e88cb8c95eb57da1d89bbe2d6843","group_id":"a3a44c33ae181f447018497cdddfd3b510b8130457824ebb50bf10c0cd36a631","id":"ALIGN-0005613","index":5613,"input":{"a":"ACTGCTACGGNNATACAGAATACAACGTCTTCATGCCCG","b":"ACTGCTACGGNNACACAGAATCACAAACGTCTTCAGCCCG","source_sequence":"ACTGCTACGGNNATACAGAATACAACGTCTTCATGCCCG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTAT-G--GGGTAAAACTCGATGTGGTTGAACGGTGCGATGAT","aligned_b":"ATCATCGCACCGTTCAACCACATCGAGTTTTAC---CCCATACA","edit_distance":26,"within_threshold":true},"family":"reverse_complement","fingerprint":"f91af442e753509753c4817a0143ff4bd833d0b984356cba31d6c0e76f18aaf2","group_id":"fb07f83f9d0d19f3b7c227c6e50aff8032d0c745f28ef1e4c46d15e88f893e77","id":"ALIGN-0005624","index":5624,"input":{"a":"TGTATGGGGTAAAACTCGATGTGGTTGAACGGTGCGATGAT","b":"ATCATCGCACCGTTCAACCACATCGAGTTTTACCCCATACA","source_sequence":"TGTATGGGGTAAAACTCGATGTGGTTGAACGGTGCGATGAT","threshold":26},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"G--TAGATA-ATATTATTATTATTCGACCCAGG","aligned_b":"GTTTAGATAGATATTATTATTA-TCGACCCGGG","edit_distance":5,"within_threshold":true},"family":"tandem_repeat","fingerprint":"0968cb3766447bbe8a034d3d7851e5c8e00b6700be1e3baed778e9ba52f27bb7","group_id":"277ed73b95abdd82e248e70f1b5d491191c9ec9b7a2d554489ccf0484e664dcd","id":"ALIGN-0005626","index":5626,"input":{"a":"GTAGATAATATTATTATTATTCGACCCAGG","b":"GTTTAGATAGATATTATTATTATCGACCCGGG","source_sequence":"GTAGATAATATTATTATTATTCGACCCAGG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACGAGTTAA-GGGGGGGGGGCT-TTGAATC","aligned_b":"AACGAGTTAATGGAGGGGGGGCTCTTGAATC","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"fb5abe85dd18c5738d963c4a94fd0eee8e5d2a96c4d601dbb31e82fab6a3dbc9","group_id":"8b3dbdff96fff4f0eb061af02a35168ba15a36e83cfc98659547cfeb7e1e86e4","id":"ALIGN-0005640","index":5640,"input":{"a":"AACGAGTTAAGGGGGGGGGGCTTTGAATC","b":"AACGAGTTAATGGAGGGGGGGCTCTTGAATC","source_sequence":"AACGAGTTAAGGGGGGGGGGCTTTGAATC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-ATACTAACCCAAGG-GTATAGTCCTTCTCAGGGTCTA","aligned_b":"TAGACCCTGAGAAGGACTATA-CCCTTGGGTTAGTAT-","edit_distance":20,"within_threshold":false},"family":"reverse_complement","fingerprint":"8d92fac507bbb4f8f41c0f8733cef45e1dd828a63f49ffe82cd7ce7a6f60d4c4","group_id":"177c655b06363c1178e04de50aa99a0578225e1fe56483a98854d0c61d5c4241","id":"ALIGN-0005644","index":5644,"input":{"a":"ATACTAACCCAAGGGTATAGTCCTTCTCAGGGTCTA","b":"TAGACCCTGAGAAGGACTATACCCTTGGGTTAGTAT","source_sequence":"ATACTAACCCAAGGGTATAGTCCTTCTCAGGGTCTA","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGCCACGCGGCCGCCGCCGCCGCCGCCGTTAACCCC","aligned_b":"-GCCACGCGCCCGCCGCCGCCGCCGCCGTTAACCCC","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"d97c6da270df09364740fc8a249a5f19ce88f093b6084a814f739a27d3e75bac","group_id":"c7cbb989f344f9d4a8ffc8942c831c62417deb2f868a1e907a7a8053ff66a19b","id":"ALIGN-0005651","index":5651,"input":{"a":"CGCCACGCGGCCGCCGCCGCCGCCGCCGTTAACCCC","b":"GCCACGCGCCCGCCGCCGCCGCCGCCGTTAACCCC","source_sequence":"CGCCACGCGGCCGCCGCCGCCGCCGCCGTTAACCCC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATCAAAAAAATTATTATTATTATTTCCCGGTAA","aligned_b":"ATCAAAAAAATTGTTATT-TTATTTCCCGGTAA","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"6c39c8d3b9d8dd055022dd86d53e08880cc105e76a135d7938a16717cf1997e4","group_id":"436d4e6924cc7f66529a67134a95ea2259089bb1696ce71551029ccd870afa9d","id":"ALIGN-0005701","index":5701,"input":{"a":"ATCAAAAAAATTATTATTATTATTTCCCGGTAA","b":"ATCAAAAAAATTGTTATTTTATTTCCCGGTAA","source_sequence":"ATCAAAAAAATTATTATTATTATTTCCCGGTAA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGCGGCATAGTATCCCGGAC-CTTGTCCAACCGT--GTGAGAC--CG-TTAC","aligned_b":"---GTAACGGTCTCAC--ACGGTTGGACAA-GGTCCGGGATACTATGCCGCC","edit_distance":28,"within_threshold":true},"family":"reverse_complement","fingerprint":"c26c6a1abfaa67a6af875b401c656ee039b79eeb8b224351b277980c6a8a34a6","group_id":"47b51943e2375dd4950fc0d42286b5036f26e47e7e187fba8c178e571823e30b","id":"ALIGN-0005714","index":5714,"input":{"a":"GGCGGCATAGTATCCCGGACCTTGTCCAACCGTGTGAGACCGTTAC","b":"GTAACGGTCTCACACGGTTGGACAAGGTCCGGGATACTATGCCGCC","source_sequence":"GGCGGCATAGTATCCCGGACCTTGTCCAACCGTGTGAGACCGTTAC","threshold":29},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TATTAAATGANNCGTGAAATGGTCGCACGGTTTGACAATCCGGCCTACC","aligned_b":"-ATTAAATGAGNCGTGAAATGGTCGCACGGTTTGACAAT-CGNCCTACC","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"2c31f72dc5958e7baceed632efc233dcd44813bf91f6ddfc7e4d5de31b802246","group_id":"ad779373570f7ae0af1fb2fef4938b900e62b3101332ce68f68aaffb6ae49fcf","id":"ALIGN-0005733","index":5733,"input":{"a":"TATTAAATGANNCGTGAAATGGTCGCACGGTTTGACAATCCGGCCTACC","b":"ATTAAATGAGNCGTGAAATGGTCGCACGGTTTGACAATCGNCCTACC","source_sequence":"TATTAAATGANNCGTGAAATGGTCGCACGGTTTGACAATCCGGCCTACC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAAGGGCGC-GTCGTCGTCCCTGCTGTT","aligned_b":"C-A-GGCGCAGTCGTCGTCCCTGCTGTT","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"9eade0055ddd24189a73e73cded36becc6b4c2d2b40322e9fe6760ccc90e5a66","group_id":"fcbcfe7d23ae553740ab7b70ec401b9114353c274ecaa77461c392e9e9f58050","id":"ALIGN-0005736","index":5736,"input":{"a":"CAAGGGCGCGTCGTCGTCCCTGCTGTT","b":"CAGGCGCAGTCGTCGTCCCTGCTGTT","source_sequence":"CAAGGGCGCGTCGTCGTCCCTGCTGTT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAACACTGTCNNC-C-ATCTGACGCGCTGGCCG-G","aligned_b":"GAACACTGTCNNCACTATCTGACGCGCTGGCCGAG","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"d4fe8fa1517c372cb81ac2d01b41d0a20a06581976ec6682483c06f989f3cf35","group_id":"a4882151818aa40a86e01b9fdad07df3a8d2c8cf43e74683daf86e287de06403","id":"ALIGN-0005738","index":5738,"input":{"a":"GAACACTGTCNNCCATCTGACGCGCTGGCCGG","b":"GAACACTGTCNNCACTATCTGACGCGCTGGCCGAG","source_sequence":"GAACACTGTCNNCCATCTGACGCGCTGGCCGG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCTCTGTGC-TTTTTTT-TTTTTTTTTATTCCCGCA","aligned_b":"AGCTCTGTGCTTTTTTTTATTTTTTTTTATTCCCGCA","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"8b8ec91a84127a874817bf1ab173574a3cfe785b62fdfa93506d4cc58dd7cb0d","group_id":"d5540b1529c6c8a3525a274ec6fa9b0dceb57d6bad5aa5ff459036ed68e41b2f","id":"ALIGN-0005765","index":5765,"input":{"a":"AGCTCTGTGCTTTTTTTTTTTTTTTTATTCCCGCA","b":"AGCTCTGTGCTTTTTTTTATTTTTTTTTATTCCCGCA","source_sequence":"AGCTCTGTGCTTTTTTTTTTTTTTTTATTCCCGCA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGTCGGTATNNTATACGATAACCAAC","aligned_b":"AGGTCGGTATNNTATACGATANCCAAC","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"32341c723046eef2fc5d2c3499a6bf2271e4af43d68f61f982cf718955b8c6af","group_id":"63f0534d5c5c2a3ac5b0041b343935f1a7f01a98fcbf8f6abcbbc71940d45fef","id":"ALIGN-0005783","index":5783,"input":{"a":"AGGTCGGTATNNTATACGATAACCAAC","b":"AGGTCGGTATNNTATACGATANCCAAC","source_sequence":"AGGTCGGTATNNTATACGATAACCAAC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTTTGAAGATTTTTTTTTTTTAGTGTCCATT","aligned_b":"-TTTGAAGATTTTTTTTTTTTAGTGTCCATT","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"0cb88df02d16de4cd0b959ab7ba3563d68575c5c767fd2e41f96bed314818dbe","group_id":"5ea495e3f96dba23c2f4482610e05c16950af43aaa43d345ea1c094ca7738372","id":"ALIGN-0005785","index":5785,"input":{"a":"TTTTGAAGATTTTTTTTTTTTAGTGTCCATT","b":"TTTGAAGATTTTTTTTTTTTAGTGTCCATT","source_sequence":"TTTTGAAGATTTTTTTTTTTTAGTGTCCATT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTAGGGAACANNTTCTTTGTGCAAATGATAGGCAG","aligned_b":"GTACGGAACANNTTCTTTGTGCAAATGATAGGCAG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"01f368a666b33482a754e5bb9dce40d9b4640178ec1dfdbee15f9364f5e7e0df","group_id":"6d942d43092084e73cdb6294c769c7b1925c97553306b192639b89fa43f8bd2d","id":"ALIGN-0005788","index":5788,"input":{"a":"GTAGGGAACANNTTCTTTGTGCAAATGATAGGCAG","b":"GTACGGAACANNTTCTTTGTGCAAATGATAGGCAG","source_sequence":"GTAGGGAACANNTTCTTTGTGCAAATGATAGGCAG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"A---AACTGCCGTCT-TTCGTCGTTCAGCATTTGATCCAT","aligned_b":"ATGGATCAAATG-CTGAACGACG-AAAG-A-CGGCAGTTT","edit_distance":25,"within_threshold":true},"family":"reverse_complement","fingerprint":"015fc69aefde1009abd94a1ad1a32565f169207b3a0eaf9c09755d6c2b2099de","group_id":"fcc8e43bd20a57b68f7b7a7b4c348fa2d953a130cc8c1a56083880ca59203971","id":"ALIGN-0005799","index":5799,"input":{"a":"AAACTGCCGTCTTTCGTCGTTCAGCATTTGATCCAT","b":"ATGGATCAAATGCTGAACGACGAAAGACGGCAGTTT","source_sequence":"AAACTGCCGTCTTTCGTCGTTCAGCATTTGATCCAT","threshold":26},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGAATA-TTGNNGTGTGCCGCTAGTGCAGGGGGTGCCCACTCTGAC","aligned_b":"CTGAATAGTTGNNGTGTGCCGCTAGTGCAGGGGGTGCCCACTCTGAC","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"5cf685acbdd33ab94bf72371636a7d7b252db4aa553ade83f952e8369a34ea51","group_id":"18f006a90e24b0fbd30ff44624c868c57e275255175330dcbd4cce2e6b40fc12","id":"ALIGN-0005818","index":5818,"input":{"a":"CTGAATATTGNNGTGTGCCGCTAGTGCAGGGGGTGCCCACTCTGAC","b":"CTGAATAGTTGNNGTGTGCCGCTAGTGCAGGGGGTGCCCACTCTGAC","source_sequence":"CTGAATATTGNNGTGTGCCGCTAGTGCAGGGGGTGCCCACTCTGAC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATCCGGACCT-TTTTTTTTAGAGGTTCCA","aligned_b":"CATCCGATCCTATTTTTTTTAGTGGTTCCA","edit_distance":5,"within_threshold":true},"family":"homopolymer","fingerprint":"601b02e367c988d4b254f67a4865c23df706a881dceda6b18a09eeb60a2737a3","group_id":"787971876c7c2a69649297c7c87e68dd027dca0bfe6ba4e975e8d3b1f69cfca2","id":"ALIGN-0005835","index":5835,"input":{"a":"GATCCGGACCTTTTTTTTTAGAGGTTCCA","b":"CATCCGATCCTATTTTTTTTAGTGGTTCCA","source_sequence":"GATCCGGACCTTTTTTTTTAGAGGTTCCA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCGATTAACATAATAAT-AAT-AATAATAATACGCCCTCTA","aligned_b":"TCGATTAACATAATAATCAATAAATAATAATACGCCC-CTA","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"32684bafa7847a7da1cdb4bb312cb9b0214587a12f3321769fa70656438704f4","group_id":"f82bbd3b5e2f0dd1dab0a954532885bfcee5aa8e8394c20eb95609f7cec7c6a8","id":"ALIGN-0005861","index":5861,"input":{"a":"TCGATTAACATAATAATAATAATAATAATACGCCCTCTA","b":"TCGATTAACATAATAATCAATAAATAATAATACGCCCCTA","source_sequence":"TCGATTAACATAATAATAATAATAATAATACGCCCTCTA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAGGCAGCGGCTGCTGCTGCTGCTGCTGCTAAGGGCGCA","aligned_b":"GAGGCAGCGGCTGCTGCTGCAGCTGCTGCTAAGGGCGCA","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"b381dd02f7c27e0e2ceeb3b8e71301c1fd75ad1288525e17fc6c7e54eadf0a9c","group_id":"02e3af6931af6fbbe850aa29fdcadf2c6610536df3c6caeefcfedcebd9e3923b","id":"ALIGN-0005896","index":5896,"input":{"a":"GAGGCAGCGGCTGCTGCTGCTGCTGCTGCTAAGGGCGCA","b":"GAGGCAGCGGCTGCTGCTGCAGCTGCTGCTAAGGGCGCA","source_sequence":"GAGGCAGCGGCTGCTGCTGCTGCTGCTGCTAAGGGCGCA","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGTTTATC-TC-CTCCTCC-TCCGGACATAGC","aligned_b":"CCGTTTATCATCACTCCTCCGTCCGGACATAGC","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"3778a933a4500b7af35872b24546498e7b453d8654417aa868e17c3c3e915d43","group_id":"187a8c535a5b1b43b2ce38dcd87935ce7cc8e778071a576ba487eee7bb5653b5","id":"ALIGN-0005921","index":5921,"input":{"a":"ACGTTTATCTCCTCCTCCTCCGGACATAGC","b":"CCGTTTATCATCACTCCTCCGTCCGGACATAGC","source_sequence":"ACGTTTATCTCCTCCTCCTCCGGACATAGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCATCATGGCCGTA-AGCACTTCCTTTTCTATTGTTTTCACG-","aligned_b":"-CGTGAAAACAATAGAAAAGGAAGTGCT-TACGGCCATGATGA","edit_distance":27,"within_threshold":true},"family":"reverse_complement","fingerprint":"ab6902a6c2c8b93e6c2ec18458f0794b38d5fafd09daef22ab77fac36622d01a","group_id":"9ac11cf95334f6a94a32393cfcd31d644aa026a7d099617c52331b9c0fb4f574","id":"ALIGN-0005929","index":5929,"input":{"a":"TCATCATGGCCGTAAGCACTTCCTTTTCTATTGTTTTCACG","b":"CGTGAAAACAATAGAAAAGGAAGTGCTTACGGCCATGATGA","source_sequence":"TCATCATGGCCGTAAGCACTTCCTTTTCTATTGTTTTCACG","threshold":28},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"C-GGAC-CTAGGNNTAA-GGACGGACACAGTCTGCCCGGCTGTATG","aligned_b":"CNGGACACTAGGNNTAAGGGACGGACACAGTCTGCCCGGCTGTATG","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"353bcbbcda54ffc7e775d2790d812ed99bfacdc21647c8e34b5cfe4fb44c6516","group_id":"d2b2352bf7e5fd91373efb2ba2ea3177999de4184f61d87aa35176d6ceb46e99","id":"ALIGN-0005933","index":5933,"input":{"a":"CGGACCTAGGNNTAAGGACGGACACAGTCTGCCCGGCTGTATG","b":"CNGGACACTAGGNNTAAGGGACGGACACAGTCTGCCCGGCTGTATG","source_sequence":"CGGACCTAGGNNTAAGGACGGACACAGTCTGCCCGGCTGTATG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCGGGTTGCGAAAAAAAAAAAAACCTAGCGGTC","aligned_b":"TC-GGTTGCGAAAAAAAAAAAAACC-AGCGGTC","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"a79ebb3e1a5f6bf7edc15e43c0fef4cd190fcef0d078a4d45b07a0cc9684bd22","group_id":"de6e8603defbcb3c050aecca5595b7a75abcbe46d56bdec03616362e955f928e","id":"ALIGN-0005935","index":5935,"input":{"a":"TCGGGTTGCGAAAAAAAAAAAAACCTAGCGGTC","b":"TCGGTTGCGAAAAAAAAAAAAACCAGCGGTC","source_sequence":"TCGGGTTGCGAAAAAAAAAAAAACCTAGCGGTC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCACGTATTCAGCAGCAGATGAGA-GCA","aligned_b":"GCACGTATTCGGC-GCGGATGAGATGCA","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"a1e2eb2a0b7e5755196c852d10215e18b6583894f97dfc9491d1483f5750db5b","group_id":"8b08c267ba7011fc2beafeaa2d4d6ac4fb0ff596ef68b20878eb5a0aafe275fa","id":"ALIGN-0005941","index":5941,"input":{"a":"GCACGTATTCAGCAGCAGATGAGAGCA","b":"GCACGTATTCGGCGCGGATGAGATGCA","source_sequence":"GCACGTATTCAGCAGCAGATGAGAGCA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGGAT-ACATGTTGTTGTTGTTGTTGTTGTTCTTAGAGAA","aligned_b":"GGGATAACATGTT-TTGTTGTTGTTGTTGTTCTTAGAGAA","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"0d450df8f3d70d186789291bd25607706129d793ce4bb553fd177f508f0c881a","group_id":"4f91d18db8ad308c33ec36d5036d3b7bd282826d31b21529c2a6b4fc5dcfa4bb","id":"ALIGN-0005946","index":5946,"input":{"a":"GGGATACATGTTGTTGTTGTTGTTGTTGTTCTTAGAGAA","b":"GGGATAACATGTTTTGTTGTTGTTGTTGTTCTTAGAGAA","source_sequence":"GGGATACATGTTGTTGTTGTTGTTGTTGTTCTTAGAGAA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--GT-CAC-CTG-CGTACA-TCGGCAAGTGTACAACCTCGTGTACGC","aligned_b":"GCGTACACGAGGTTGTACACTTGCCGA-TGTAC--GCAGGTG-A--C","edit_distance":21,"within_threshold":false},"family":"reverse_complement","fingerprint":"a8334407335dc1232be74fb15305932805b829eefcb6db27ba336aececcc2d7e","group_id":"b2101eaf94c1c8174117e964cc7c3f23118f1c9a56312b7767320b3f8a96be65","id":"ALIGN-0005959","index":5959,"input":{"a":"GTCACCTGCGTACATCGGCAAGTGTACAACCTCGTGTACGC","b":"GCGTACACGAGGTTGTACACTTGCCGATGTACGCAGGTGAC","source_sequence":"GTCACCTGCGTACATCGGCAAGTGTACAACCTCGTGTACGC","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"C-G-GGCCCCGAC-AAGACCTCAGGTCTGCGACGACCACTCTG","aligned_b":"CAGAGTGGTCGTCGCAGACCTGAGGTCT-TGTCG-GGGC-CCG","edit_distance":19,"within_threshold":true},"family":"reverse_complement","fingerprint":"b12dd0e1fecff68601ba92f240b52072619108716b553d668febe040ea55a425","group_id":"accf76759e6c7782d257acf5ea6d6cd00e6c96c2ce632835e1ff7bc7d37edaf0","id":"ALIGN-0005969","index":5969,"input":{"a":"CGGGCCCCGACAAGACCTCAGGTCTGCGACGACCACTCTG","b":"CAGAGTGGTCGTCGCAGACCTGAGGTCTTGTCGGGGCCCG","source_sequence":"CGGGCCCCGACAAGACCTCAGGTCTGCGACGACCACTCTG","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTCATAATGTTGTTGTTGTTGTTGTTAGGTAGACC","aligned_b":"GGTCATAATGTTGTTGTTG-TGTTTTTAGGTAGACC","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"e477afe0d3a1ba12b6e128f8e3855d6e74ee031a4e398bae60861238715cc7ec","group_id":"3488760387ca82b78c6439b79e37525e85fb7f92b7c0dc479d18399445bbd1b1","id":"ALIGN-0005976","index":5976,"input":{"a":"GGTCATAATGTTGTTGTTGTTGTTGTTAGGTAGACC","b":"GGTCATAATGTTGTTGTTGTGTTTTTAGGTAGACC","source_sequence":"GGTCATAATGTTGTTGTTGTTGTTGTTAGGTAGACC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTTGGCCCACNNGCGCCGGATAGCAACGGAGCAAACCTA-GCTCGATA","aligned_b":"CTTGGCCCAANNGCGCCGGATAGCAACGCAGCAAACCTATGCTCGATA","edit_distance":3,"within_threshold":false},"family":"literal_N","fingerprint":"1a8f37374f46d7b7eef607d5a4e891e0f5a01f08cba7c6f02ff083dda37528b3","group_id":"cc9a96fba25a92722a9ed647f62045fa715b5ad7e29bf73bc4cf1e9555a8cc1a","id":"ALIGN-0005978","index":5978,"input":{"a":"CTTGGCCCACNNGCGCCGGATAGCAACGGAGCAAACCTAGCTCGATA","b":"CTTGGCCCAANNGCGCCGGATAGCAACGCAGCAAACCTATGCTCGATA","source_sequence":"CTTGGCCCACNNGCGCCGGATAGCAACGGAGCAAACCTAGCTCGATA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CACTGCCAGGGGGGGGGGGGGGGGGTCAAGGGCTG","aligned_b":"CACTGCCAGGGGGGGGGGGGGGGGGTGAAGGGCTG","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"f60756abb45f42c7465c83a3f93b45585fe7a74adff8e3314f300001b3f75cc2","group_id":"ea947bb3e42626686e7b701e9af3383f11e471920cd012150ff3e0b40986071e","id":"ALIGN-0005995","index":5995,"input":{"a":"CACTGCCAGGGGGGGGGGGGGGGGGTCAAGGGCTG","b":"CACTGCCAGGGGGGGGGGGGGGGGGTGAAGGGCTG","source_sequence":"CACTGCCAGGGGGGGGGGGGGGGGGTCAAGGGCTG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACTCTATGCG-TATGGACGGCTTCATT","aligned_b":"ACTCTATGCGCTATGGACGGCTTCATT","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"27a9719f704ce7abc241713a4a7e55a4289b087b5ee98efa32cd058be02c88c2","group_id":"6087aef93c11c257e8eeb2d0f7aeaafb9cb44d4ef6e6a0cd33d51e5f7e9f31eb","id":"ALIGN-0006007","index":6007,"input":{"a":"ACTCTATGCGTATGGACGGCTTCATT","b":"ACTCTATGCGCTATGGACGGCTTCATT","source_sequence":"ACTCTATGCGTATGGACGGCTTCATT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTACTATATTATTATTATTATTATTATACACCTCA","aligned_b":"CGTACTATATT-TTATTATTATTA-TACACATCTCA","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"c97108da63510b432a25429b1133cba429ac6b25fe850d56f3f737496e8d4494","group_id":"5d7037c74ce9c8d2954269e94ffeaf9966698aeafda57f1b2f0903122bf5a3d5","id":"ALIGN-0006031","index":6031,"input":{"a":"CGTACTATATTATTATTATTATTATTATACACCTCA","b":"CGTACTATATTTTATTATTATTATACACATCTCA","source_sequence":"CGTACTATATTATTATTATTATTATTATACACCTCA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TCCTGGCG--CTTGGCGCGGTAACGCGAAATAT-ATATTCGTG","aligned_b":"CTCCTGGCGACCTTGACGCGGTAACGCGAAATATCATATTCGTG","edit_distance":5,"within_threshold":false},"family":"clustered_indels","fingerprint":"59aa3c52e081889961db51185a19a4a2ea96b869c76ff10f95495bafc3c4e128","group_id":"47f948ed2b9a2f64aae0cd8add69dd85c654b8cc2cb169ebdb1598d9c748652e","id":"ALIGN-0006042","index":6042,"input":{"a":"TCCTGGCGCTTGGCGCGGTAACGCGAAATATATATTCGTG","b":"CTCCTGGCGACCTTGACGCGGTAACGCGAAATATCATATTCGTG","source_sequence":"TCCTGGCGCTTGGCGCGGTAACGCGAAATATATATTCGTG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TATATTTCTANNGACGCCCGCACGGGGCGCTAAGTACG-G","aligned_b":"TATATTTCTANNGACGCCCGCACGGGGCGCTAAGTACGAG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"8697389902cd85c634f64a8a869e0378215ceb027927410dcf992c602dca9834","group_id":"7aed0e512994293c7a83d53418a8bb6ffccad8b67e9314a28690f990493a9568","id":"ALIGN-0006053","index":6053,"input":{"a":"TATATTTCTANNGACGCCCGCACGGGGCGCTAAGTACGG","b":"TATATTTCTANNGACGCCCGCACGGGGCGCTAAGTACGAG","source_sequence":"TATATTTCTANNGACGCCCGCACGGGGCGCTAAGTACGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGCTCATGANNTACAAATCCATAAGAATTACCGGGTGTGTCAAATGGGC","aligned_b":"ACGCTCATGANNTACAAATCCATAAGAATTA-CGGGTGTGTCAAATGGGC","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"c9db42d0d1e4cbb074c14d903626dac4def11a18f556f1e5a02617c22c18dc54","group_id":"699d246584766ed9d0c1ae05c5ed4b56ff3c3899a7aa580bd0eaaa2a33319da8","id":"ALIGN-0006083","index":6083,"input":{"a":"ACGCTCATGANNTACAAATCCATAAGAATTACCGGGTGTGTCAAATGGGC","b":"ACGCTCATGANNTACAAATCCATAAGAATTACGGGTGTGTCAAATGGGC","source_sequence":"ACGCTCATGANNTACAAATCCATAAGAATTACCGGGTGTGTCAAATGGGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGCGGGACAAAAAAAAAAAAAAAAGGCTGTGGT-A","aligned_b":"GCGCGGGAC--AAAAAAAAAAAAAAGGCTGTGGTGA","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"d18e9bd72a966f32e323320ad77cb5a6b3a46bd649936d971102bfc7841be720","group_id":"d437e46327fecdab0a32dd29e70bae18463848df01d70080d9f733fc97ce3440","id":"ALIGN-0006110","index":6110,"input":{"a":"GCGCGGGACAAAAAAAAAAAAAAAAGGCTGTGGTA","b":"GCGCGGGACAAAAAAAAAAAAAAGGCTGTGGTGA","source_sequence":"GCGCGGGACAAAAAAAAAAAAAAAAGGCTGTGGTA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAACAACGTCNNAACGGACAGACCGTTACTACATCTCGTACGTCACC","aligned_b":"GAACAACGTCNNAACGGACAGACCGTTACTACATCTCNTACGTCACC","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"c76f98a13e08833cd8031f0e0c5a4e9572f26952478f071ce131a281132842a9","group_id":"8e784f4982feb306284054719ced037e145c7902c66294bbd91f23472fd0544d","id":"ALIGN-0006118","index":6118,"input":{"a":"GAACAACGTCNNAACGGACAGACCGTTACTACATCTCGTACGTCACC","b":"GAACAACGTCNNAACGGACAGACCGTTACTACATCTCNTACGTCACC","source_sequence":"GAACAACGTCNNAACGGACAGACCGTTACTACATCTCGTACGTCACC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTTGAGTTCAGGGGGG-GGGGGGGGGGAATAGTAGTC","aligned_b":"-TTGAGTTCAGGGGGGCGGGGGGGGGGAATAGTAGTC","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"225f8ca51a0e02bbc35606e22233b85e2a0a2c717350e37d452e4c76b6cbecec","group_id":"c5fe9fdbf5508577d648ae090b4be2ac521f7ec8210f8c2a2e2bb6fef20cdd12","id":"ALIGN-0006130","index":6130,"input":{"a":"TTTGAGTTCAGGGGGGGGGGGGGGGGAATAGTAGTC","b":"TTGAGTTCAGGGGGGCGGGGGGGGGGAATAGTAGTC","source_sequence":"TTTGAGTTCAGGGGGGGGGGGGGGGGAATAGTAGTC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCGTGCTCTCTACTACTACTATGCCTCAGG","aligned_b":"TCGTGCTCTCTACTACTACTTGGCCTCAGG","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"6d15b4001d4072ac55ca928f09e614f0f7e968383c90cd6e0cce1294f4c6e2ca","group_id":"3a373ea936e055ced0aec256222d1f325b0df5f6e9a6e1d7bb7680555d48194d","id":"ALIGN-0006131","index":6131,"input":{"a":"TCGTGCTCTCTACTACTACTATGCCTCAGG","b":"TCGTGCTCTCTACTACTACTTGGCCTCAGG","source_sequence":"TCGTGCTCTCTACTACTACTATGCCTCAGG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATCACGAATTGGGGGGGGGGGGGGGTTGAAAACTT","aligned_b":"A-CACGAACT-GGGGGGGGGGGGGGTTGAAACTTT","edit_distance":5,"within_threshold":true},"family":"homopolymer","fingerprint":"6c13ba616bf5478614bf2a8c1bca5012010b707e38a355af2af517285ef6505a","group_id":"920029e3dcd2c74b85a517fd2c449c52a64bebb92fb9c9666dfb5d3926751de8","id":"ALIGN-0006155","index":6155,"input":{"a":"ATCACGAATTGGGGGGGGGGGGGGGTTGAAAACTT","b":"ACACGAACTGGGGGGGGGGGGGGTTGAAACTTT","source_sequence":"ATCACGAATTGGGGGGGGGGGGGGGTTGAAAACTT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAAAGAGGT-TNNAATC-AACCCTGTGTCCTGCCGAGTGTTTG","aligned_b":"AAANGAGGTGTNNAATCGAACCCTGTGTCCCGCCGAGTGTTTG","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"583139f8a4dd4b625a1b72ba2df03909c3d9d0c9f3b35e2630435fa0ebd4e634","group_id":"ce0beee5eaafb866f1fce6439de4b208310c76e916871667a674a802c8183eba","id":"ALIGN-0006168","index":6168,"input":{"a":"AAAAGAGGTTNNAATCAACCCTGTGTCCTGCCGAGTGTTTG","b":"AAANGAGGTGTNNAATCGAACCCTGTGTCCCGCCGAGTGTTTG","source_sequence":"AAAAGAGGTTNNAATCAACCCTGTGTCCTGCCGAGTGTTTG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGGTAACCAGGGAGTTGGGTAGCTTGTGAGATCTGAGGGCCTCCT","aligned_b":"-GGTAACCA-GGAGTTGGGTAGCTTGTGAGATCTGAGGG-CTGCT","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"13ba46e43896667d623b7e8d46c70b0921ba882143f6a08d2769a8563ccefc10","group_id":"50c18445b3b950f86cea6b1e98000fcdaa0d6c92ec8bb26b84fc648030170375","id":"ALIGN-0006172","index":6172,"input":{"a":"GGGTAACCAGGGAGTTGGGTAGCTTGTGAGATCTGAGGGCCTCCT","b":"GGTAACCAGGAGTTGGGTAGCTTGTGAGATCTGAGGGCTGCT","source_sequence":"GGGTAACCAGGGAGTTGGGTAGCTTGTGAGATCTGAGGGCCTCCT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGCTCACCANNCGTGGCCCCTACGCAGCGGCGCCC","aligned_b":"AGGCTCACCANNCGTGGCCGCTACGCAGCGGCGCCC","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"6357466f16b78965af494cda1504ff5b568761d7243e9d8b438c5d7749a77ef9","group_id":"f0b1bebbb698310ef50f9923357d22cdd6d4be1df915dc31d7a1d2a7c4ea56be","id":"ALIGN-0006178","index":6178,"input":{"a":"AGGCTCACCANNCGTGGCCCCTACGCAGCGGCGCCC","b":"AGGCTCACCANNCGTGGCCGCTACGCAGCGGCGCCC","source_sequence":"AGGCTCACCANNCGTGGCCCCTACGCAGCGGCGCCC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACATCCAGGGCCGCCGCCGCCGCTTGTTCC","aligned_b":"ACAACCAGGGCCGCCGCCGCCGCTTGTTCC","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"74457679876f9ec47d5edd2f1a99f97014a222a1eb2298acb3ce91d7ae94ad29","group_id":"c576a4239dc2ed96497df2e4932bb03939ec656a5f7872c829cd67385f1305f2","id":"ALIGN-0006181","index":6181,"input":{"a":"ACATCCAGGGCCGCCGCCGCCGCTTGTTCC","b":"ACAACCAGGGCCGCCGCCGCCGCTTGTTCC","source_sequence":"ACATCCAGGGCCGCCGCCGCCGCTTGTTCC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTTACTGAGTGGATCC-GTGAGTAA-G","aligned_b":"C-TTACTCA-CGGATCCACTCAGTAACG","edit_distance":8,"within_threshold":false},"family":"reverse_complement","fingerprint":"37773b88120138f087e6b510e8e59af30fc315f1dac87bfc3e3452848d0369d7","group_id":"5e589715b846531b7602cbc7abd359f5fb0d39835ef078a4363d5559aa437656","id":"ALIGN-0006184","index":6184,"input":{"a":"CGTTACTGAGTGGATCCGTGAGTAAG","b":"CTTACTCACGGATCCACTCAGTAACG","source_sequence":"CGTTACTGAGTGGATCCGTGAGTAAG","threshold":7},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAACCACGTANNAGCAAGGATGGCAATTCCCACCGG-CTT","aligned_b":"AAACCACGTANNAGCAAGGATGGCAATTCCCACCGGACTT","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"1dc3fb1d28c056a24aa385307a562f87bc33713cca3fee0994af4cdc137c5c75","group_id":"d4c6e7f3891279810cb429b754edc1cbb90240d9de3b4a50e2f7e0b7456649d2","id":"ALIGN-0006188","index":6188,"input":{"a":"AAACCACGTANNAGCAAGGATGGCAATTCCCACCGGCTT","b":"AAACCACGTANNAGCAAGGATGGCAATTCCCACCGGACTT","source_sequence":"AAACCACGTANNAGCAAGGATGGCAATTCCCACCGGCTT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTGTTGTCAATGGTCTTAGTGAGCTTA","aligned_b":"TAAGCTCACTAAGACCATTGACAACACT","edit_distance":18,"within_threshold":true},"family":"reverse_complement","fingerprint":"de57eeb217209e5a0c56066d790eea9fc3c2992819b0b8ffb023b177299a7e01","group_id":"7dd9e58fcc590b90aaa51995ef02f7a64b3466f95951accb12e323113d081edd","id":"ALIGN-0006189","index":6189,"input":{"a":"AGTGTTGTCAATGGTCTTAGTGAGCTTA","b":"TAAGCTCACTAAGACCATTGACAACACT","source_sequence":"AGTGTTGTCAATGGTCTTAGTGAGCTTA","threshold":18},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAAAACCTTTGCTGCTGCTGCTTTTGCAGA","aligned_b":"CAAAACC-TTGCTGCTTCTGCTTTT-CAGA","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"6fdc5db9a88034b75fb514723fa7bd72d2609020a00a5fc91b5c420f02a13763","group_id":"9cab98a5a466863c898df45f9e3920e9a5de6722d388f8615f637c9bd01eeeee","id":"ALIGN-0006206","index":6206,"input":{"a":"CAAAACCTTTGCTGCTGCTGCTTTTGCAGA","b":"CAAAACCTTGCTGCTTCTGCTTTTCAGA","source_sequence":"CAAAACCTTTGCTGCTGCTGCTTTTGCAGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AATGGGAAATCCCCCCCCCCCCCCCCACCTTGGAGA","aligned_b":"AATGGGAAAT-CCCCCCCCCCCCCCCACCTTGGAGA","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"e2d9591559dc23a3d98cabf057b1f222c2d882f9ff409638ef6fe43c4ed6533b","group_id":"4e8ea8c99bc91f30aff85d9b6e48e0c7bd4026dcec5240cf0641813b93981e19","id":"ALIGN-0006210","index":6210,"input":{"a":"AATGGGAAATCCCCCCCCCCCCCCCCACCTTGGAGA","b":"AATGGGAAATCCCCCCCCCCCCCCCACCTTGGAGA","source_sequence":"AATGGGAAATCCCCCCCCCCCCCCCCACCTTGGAGA","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CT-AGGCAATAGCATACA-TATCTTGCC","aligned_b":"CTAAGGCAATAGCATACATTCTGTTCCC","edit_distance":5,"within_threshold":false},"family":"clustered_indels","fingerprint":"90479610d080419d7d85630db6a02d83dc1a21761535058e48d6dc54808ec66b","group_id":"d126862198a6a31466e92f82aa790edbdb96a61013a17cc980ef671171a249a7","id":"ALIGN-0006227","index":6227,"input":{"a":"CTAGGCAATAGCATACATATCTTGCC","b":"CTAAGGCAATAGCATACATTCTGTTCCC","source_sequence":"CTAGGCAATAGCATACATATCTTGCC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TACGCAGTGGNNTTGCTGCCGCAATCGGCAGTG","aligned_b":"TACGCAGTGGNNTTGCTGCCGNTATGCGCAGTG","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"6c7f4a99d0e8ad092e73c01e45c9e9bb0772eb0ad1f218acc1d7cabba0a54bbb","group_id":"c75369b12b955bbfb1c1898a0e8c17fa84e806d35a0f25907f4b563443565fa9","id":"ALIGN-0006238","index":6238,"input":{"a":"TACGCAGTGGNNTTGCTGCCGCAATCGGCAGTG","b":"TACGCAGTGGNNTTGCTGCCGNTATGCGCAGTG","source_sequence":"TACGCAGTGGNNTTGCTGCCGCAATCGGCAGTG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GT--GCTGC-GGGTGT---AATCTGTCGCCTGCTTCGTAGACCTTGCAACCTAGG","aligned_b":"CCTAGGTTGCAAGGTCTACGAAGCAGGCGACAG-AT--TACACC-CGC-AGC-A-C","edit_distance":28,"within_threshold":false},"family":"reverse_complement","fingerprint":"2a85faa5d07f86d9bde5809494f61369eaa778986a82cf88f2c59b3251b97aa0","group_id":"8d2e556116764c3765d83570ae1343e39adddf124b43d66789b692f74f7d6f35","id":"ALIGN-0006239","index":6239,"input":{"a":"GTGCTGCGGGTGTAATCTGTCGCCTGCTTCGTAGACCTTGCAACCTAGG","b":"CCTAGGTTGCAAGGTCTACGAAGCAGGCGACAGATTACACCCGCAGCAC","source_sequence":"GTGCTGCGGGTGTAATCTGTCGCCTGCTTCGTAGACCTTGCAACCTAGG","threshold":27},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCTATAATGTT-CCTCA-GCTACATACAGG","aligned_b":"CCTATAATGTTCCCTCATACTACATACAGG","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"352658eb77d03bf00bba25dc5010f68890036aeed2aee147e0710d53c4a00a5b","group_id":"d592d0572a2e561ec31e34f682a6706a4268fa963d123ae8d85f4bc93e8ec253","id":"ALIGN-0006247","index":6247,"input":{"a":"CCTATAATGTTCCTCAGCTACATACAGG","b":"CCTATAATGTTCCCTCATACTACATACAGG","source_sequence":"CCTATAATGTTCCTCAGCTACATACAGG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCCGAACACGGCGTA-ATCAAAGCGTAATTCTATATGACGTCTTC--C","aligned_b":"G--GAAGACGTCATATAGAATTACG-CTTTGATTACGCCGTGTTCGGC","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"8178dc0ea5bdb038e5d70a0dbef7aa8330d02c44526a65e6c7fd6e7bb0394c11","group_id":"1643ab3115a474fd7ed1f24d16f78fe05140e7f95231cd5541622ce446fbc271","id":"ALIGN-0006249","index":6249,"input":{"a":"GCCGAACACGGCGTAATCAAAGCGTAATTCTATATGACGTCTTCC","b":"GGAAGACGTCATATAGAATTACGCTTTGATTACGCCGTGTTCGGC","source_sequence":"GCCGAACACGGCGTAATCAAAGCGTAATTCTATATGACGTCTTCC","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATGAATCAGCCCCCCCCCATGCTTAGGC","aligned_b":"GAGGAATCAGCCCCGCCCCCT-CTTAGGC","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"9bf5500d1e278528367bda726c89a897dfe3131bb7b0c5339a1b7585e574a3a0","group_id":"56eb0ed171de6cd350557342ce60163f73da775120e103b96b150dd575ed6477","id":"ALIGN-0006270","index":6270,"input":{"a":"GATGAATCAGCCCCCCCCCATGCTTAGGC","b":"GAGGAATCAGCCCCGCCCCCTCTTAGGC","source_sequence":"GATGAATCAGCCCCCCCCCATGCTTAGGC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGGGTTACANNTGTAGTTGGCAGTCTCG","aligned_b":"GCGGGTTACANNTGTGGTTGGCAGTCTCG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"904fc9d63ffbfc8eebb86c260a98df0417fdaa02f5ef1c6b2107e1bc1c700682","group_id":"f5f6813b1b9254569f293e3bf3fd2ff925479c50dac50c7d3a13cc0d448821f9","id":"ALIGN-0006283","index":6283,"input":{"a":"GCGGGTTACANNTGTAGTTGGCAGTCTCG","b":"GCGGGTTACANNTGTGGTTGGCAGTCTCG","source_sequence":"GCGGGTTACANNTGTAGTTGGCAGTCTCG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGAAGCTGCCCCCCCCCCCCCCAGCATGACAT","aligned_b":"CGGAAGCTGCCCCCCGCCCCCCCAGCATGACGA","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"6471bc7d194bde49edc99a899bb7bde68666471dd722f04d147b6c7a09c2d926","group_id":"536401878c75a6f8d615e9422658388671d5ab3ee98ab49dff554d3e7c43fe1b","id":"ALIGN-0006290","index":6290,"input":{"a":"AGGAAGCTGCCCCCCCCCCCCCCAGCATGACAT","b":"CGGAAGCTGCCCCCCGCCCCCCCAGCATGACGA","source_sequence":"AGGAAGCTGCCCCCCCCCCCCCCAGCATGACAT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTCATTATTAGGGGGGGGGGGGCAGTGCGATC","aligned_b":"GTCATTATTAGGGGGGGGGGGGTAGTGCGATC","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"4bf6c48f7a04be6198d69501dbaa5c3572be9cc97b982806b12817df325975c5","group_id":"1d5c0e0973db7e6819fa04fb16ed97041555fe45b7f43e69e336c452c3e061e1","id":"ALIGN-0006295","index":6295,"input":{"a":"GTCATTATTAGGGGGGGGGGGGCAGTGCGATC","b":"GTCATTATTAGGGGGGGGGGGGTAGTGCGATC","source_sequence":"GTCATTATTAGGGGGGGGGGGGCAGTGCGATC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGGAATAGTCCACCACCACCACCAAGTCCCTTA","aligned_b":"TGGAATAGTCCACCACCACCACCAAGTCCCTTA","edit_distance":0,"within_threshold":true},"family":"tandem_repeat","fingerprint":"078fdc0e169ef3e69be192e832bbdf8d15e86e39daf6e1da1d64c1c3ee4ad679","group_id":"cfc67179079969c41553f1c57c6c4eb1dc3d300495aaa12b2ca95a79a6815778","id":"ALIGN-0006306","index":6306,"input":{"a":"TGGAATAGTCCACCACCACCACCAAGTCCCTTA","b":"TGGAATAGTCCACCACCACCACCAAGTCCCTTA","source_sequence":"TGGAATAGTCCACCACCACCACCAAGTCCCTTA","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCAAGCTTAT-AAAAAAAAAAAAAAA-ACT-A-GTACATA","aligned_b":"TCAAGCTTATAAAAAAAAAAAAAAAACACTCAGGTACATA","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"98d142b2b58c7b1993cb6a8dada6185ddd2b2915ef2a3ed6a922ae50a7e549ff","group_id":"9d710757f98886422a263dfacaad4ecc99a7e94e43e6d0c762085e9b52cba02c","id":"ALIGN-0006310","index":6310,"input":{"a":"TCAAGCTTATAAAAAAAAAAAAAAAACTAGTACATA","b":"TCAAGCTTATAAAAAAAAAAAAAAAACACTCAGGTACATA","source_sequence":"TCAAGCTTATAAAAAAAAAAAAAAAACTAGTACATA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTTTAAGCTCTTCTTCTCAT-TAAGCA","aligned_b":"AGTTTAAGCTCTTCTTCTCATCTAAGCA","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"85ad3652e0e3eb5a2b470125076f311433a7efda674f7770b2d9e1a8e9f17479","group_id":"7d64c81d49cdaed06178808394506ea64ebaa908fa8d7b10fc0aa234b108198a","id":"ALIGN-0006316","index":6316,"input":{"a":"AGTTTAAGCTCTTCTTCTCATTAAGCA","b":"AGTTTAAGCTCTTCTTCTCATCTAAGCA","source_sequence":"AGTTTAAGCTCTTCTTCTCATTAAGCA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGGGTTACCNNGTTTTAACAGTCACTTTTGCGATTTTGC-A","aligned_b":"AGGGGTTACCNNGTTTTAACAGTCACTTTTGCGATTTTGCAA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"73633639cac2685a08305d5aeeaedffb8c17c0351049ff96333e27b9c9cb0503","group_id":"de332af90b0d0255085ef17d898451d0c00e3307f4b0e1c728c7ecf6fe8292c8","id":"ALIGN-0006333","index":6333,"input":{"a":"AGGGGTTACCNNGTTTTAACAGTCACTTTTGCGATTTTGCA","b":"AGGGGTTACCNNGTTTTAACAGTCACTTTTGCGATTTTGCAA","source_sequence":"AGGGGTTACCNNGTTTTAACAGTCACTTTTGCGATTTTGCA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGTCAGCGTTCGCCCGTCTCTCTCCATTGGGGCTT","aligned_b":"GC-TCAGCGTTCGCCCGTCTCTCTCCATTGGGGCTT","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"256efac15508826cb2b0cdaabd951487fe73da559f34279633efbaaafde2172f","group_id":"cdf1a5a36ae061c33fdaed22c3b9cb415c7b341d02a2afdde9fdb5c82b837c40","id":"ALIGN-0006337","index":6337,"input":{"a":"GCGTCAGCGTTCGCCCGTCTCTCTCCATTGGGGCTT","b":"GCTCAGCGTTCGCCCGTCTCTCTCCATTGGGGCTT","source_sequence":"GCGTCAGCGTTCGCCCGTCTCTCTCCATTGGGGCTT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGCTAGGCCTTTTTTTTTTTTTATGCATACGA","aligned_b":"TGCTAGGCC-TTTTTTTGTTTTATGCATAGGA","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"5c28ddf73e30cdf7de0598de4eeb55793f97502842acafe6e5db1438d455ac21","group_id":"3613b0fffa34b00c373227d8c06213af79c985083fb6afccaccd6f3a1ae58d0b","id":"ALIGN-0006355","index":6355,"input":{"a":"TGCTAGGCCTTTTTTTTTTTTTATGCATACGA","b":"TGCTAGGCCTTTTTTTGTTTTATGCATAGGA","source_sequence":"TGCTAGGCCTTTTTTTTTTTTTATGCATACGA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTAATACGTTTTTTTTTTTTTTTTTGGACC-AACGC","aligned_b":"GGTAATACG-TTTTTTTTTTTTTTTTGGACCGAACGC","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"832f80bf0af080d4fdf5aefdf2868cbb5ec0af5149fcaec0c2cc088602fb0321","group_id":"60820d058cad42ded66a88e8b3c9c50a6d90c7f9dbe1ff3ed94f094e300a1bc1","id":"ALIGN-0006370","index":6370,"input":{"a":"GGTAATACGTTTTTTTTTTTTTTTTTGGACCAACGC","b":"GGTAATACGTTTTTTTTTTTTTTTTGGACCGAACGC","source_sequence":"GGTAATACGTTTTTTTTTTTTTTTTTGGACCAACGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGGGATCTANNCGTCAGGCCAGG","aligned_b":"ACGGGATCTAANCGTCAGGCCAGG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"a00eebd01a7f5a0723da7bc3fb65483e553b38063ef4b7059312bd1b4cd96863","group_id":"2a521d2995d3255db1bd7105d9cb3703dfb1fcd49953f004953b3db40a99632a","id":"ALIGN-0006378","index":6378,"input":{"a":"ACGGGATCTANNCGTCAGGCCAGG","b":"ACGGGATCTAANCGTCAGGCCAGG","source_sequence":"ACGGGATCTANNCGTCAGGCCAGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGTCGTGTCCACCACCACCAC-CACCACCACCTCGGTCC","aligned_b":"CTGT-GTG-CCACCACCACCACACACCACCACCTC-GTCC","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"6f1530a8b9899f1a93308c66c76a8d6aff62a5f687ca6a9feab16ba1deeb147d","group_id":"7cc488e99294bbb6fb7f3f403246ff66823484f96ba58aee38f192fb80f7f46b","id":"ALIGN-0006386","index":6386,"input":{"a":"CTGTCGTGTCCACCACCACCACCACCACCACCTCGGTCC","b":"CTGTGTGCCACCACCACCACACACCACCACCTCGTCC","source_sequence":"CTGTCGTGTCCACCACCACCACCACCACCACCTCGGTCC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGTCCGTCACAAA-CCTAATAGAATCC","aligned_b":"CTGTCCGTGACAAAGCCTAATAGAATCC","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"c1b4e7216b3b703024164e098d6d089385fab514ce617eba1f91b95c0707d5fc","group_id":"a931533f13f2dd69d127a0a39bee8bbc9dbfa31e73e096d026d7511c2ea26a82","id":"ALIGN-0006422","index":6422,"input":{"a":"CTGTCCGTCACAAACCTAATAGAATCC","b":"CTGTCCGTGACAAAGCCTAATAGAATCC","source_sequence":"CTGTCCGTCACAAACCTAATAGAATCC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TTCCTAGAC-GGACCCATGCCATTTTGCGAGCCTATAGGCCACGCAC","aligned_b":"GTGCGTGGCCTATAGGCTCGCAAAATGGCATGGGT-CCGTCTA-GGAA","edit_distance":28,"within_threshold":true},"family":"reverse_complement","fingerprint":"13e661d98ec9a11c9a5371acb1fc4de9e7f764609bdc7f260aaa1cd81bb18690","group_id":"3af97e1f0d964ee22117a1e6fc087ef30658cfa61030a90b884f68cc9fc9f437","id":"ALIGN-0006424","index":6424,"input":{"a":"TTCCTAGACGGACCCATGCCATTTTGCGAGCCTATAGGCCACGCAC","b":"GTGCGTGGCCTATAGGCTCGCAAAATGGCATGGGTCCGTCTAGGAA","source_sequence":"TTCCTAGACGGACCCATGCCATTTTGCGAGCCTATAGGCCACGCAC","threshold":29},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATCGATGCGCAGCAGCAGCAGCAGCAGCAGCCCTCCACC","aligned_b":"AT-GATGCGCAGCACCAGCAGCAG-AGCAGCCCGCCACC","edit_distance":4,"within_threshold":false},"family":"tandem_repeat","fingerprint":"6d907976ecd8681ea1de8a90e73cb499fdba83a1b1887e997bd0bb40fe421f95","group_id":"c3887da30a1f2c5f7ffb668d8d0e3acf27060f7f3dc989f7792ad40ac70bcdcc","id":"ALIGN-0006431","index":6431,"input":{"a":"ATCGATGCGCAGCAGCAGCAGCAGCAGCAGCCCTCCACC","b":"ATGATGCGCAGCACCAGCAGCAGAGCAGCCCGCCACC","source_sequence":"ATCGATGCGCAGCAGCAGCAGCAGCAGCAGCCCTCCACC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TATGAGACCCNNGGATC-GGCTTATCCAGATTGGAGGAGTTCGGTAG","aligned_b":"TAGGNGACCCNTGGATCAGGCTTATCCAGATTGGAGGAGTTCGGTAG","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"82c54bd6ec5628df68a70ad7886466dd44e9781c6f5cc11624755e69fea5be3b","group_id":"1e6d3d77e44ca8b9906fea5f4229c4a56d8f3476ab2873179127f78852c6ae31","id":"ALIGN-0006448","index":6448,"input":{"a":"TATGAGACCCNNGGATCGGCTTATCCAGATTGGAGGAGTTCGGTAG","b":"TAGGNGACCCNTGGATCAGGCTTATCCAGATTGGAGGAGTTCGGTAG","source_sequence":"TATGAGACCCNNGGATCGGCTTATCCAGATTGGAGGAGTTCGGTAG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TGGATCATGTGTTGTTGTTGTTGTCC-ATAATGG","aligned_b":"TGGATCATGTGTTGTTGTTGTTGCCCTAT-ATGG","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"99c0c4462ec4b48abc1b11d64afcb33a2568f6ef93ab1fb71ab0f0c71d8371eb","group_id":"b6e81d9717167c94ce78a045dcfa34b2fc17f7f6f9293ee12f92c7a315ad89b7","id":"ALIGN-0006456","index":6456,"input":{"a":"TGGATCATGTGTTGTTGTTGTTGTCCATAATGG","b":"TGGATCATGTGTTGTTGTTGTTGCCCTATATGG","source_sequence":"TGGATCATGTGTTGTTGTTGTTGTCCATAATGG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATGCAAGTTCCCCCCCCCGGAATACTCT","aligned_b":"CATGCAAGTCCCCCCCCCGGGAATA-T-T","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"67e731eae49685ebeeb735010c32e3041834a76815d1f7e234fef7b78348e6c0","group_id":"ce09afa9c46f4fde66f73f8049df5a46a7260b3a311e872426e66e5f6dc4526e","id":"ALIGN-0006475","index":6475,"input":{"a":"CATGCAAGTTCCCCCCCCCGGAATACTCT","b":"CATGCAAGTCCCCCCCCCGGGAATATT","source_sequence":"CATGCAAGTTCCCCCCCCCGGAATACTCT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACGA-CTGGATTTTTTTTTCTGATAATTC","aligned_b":"AACGAGCTGGATTTTTTTTTC-GATAATTT","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"bbdc9e319364a26187fc696178328a7d8fda77a1c311dcea5ee279d06b08a931","group_id":"e43507dd8ee8da81f156f2692699a51b32cd5c0334acfd05793d3a37513b880b","id":"ALIGN-0006495","index":6495,"input":{"a":"AACGACTGGATTTTTTTTTCTGATAATTC","b":"AACGAGCTGGATTTTTTTTTCGATAATTT","source_sequence":"AACGACTGGATTTTTTTTTCTGATAATTC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACCAAAGTCGGATCTGGCGGTTTCCGAGTCAAG","aligned_b":"ACCAAAGTTAGATCTGGCGGTTTCCGAGTCAAG","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"ae2c8489e1df31073e1d440a132a5af9ada7148c7ca666594ed929d43a7e7d47","group_id":"63f0656db9a21cccee1b24bcf88f5a3ba89098637ba3400ed44d66bf79738d85","id":"ALIGN-0006512","index":6512,"input":{"a":"ACCAAAGTCGGATCTGGCGGTTTCCGAGTCAAG","b":"ACCAAAGTTAGATCTGGCGGTTTCCGAGTCAAG","source_sequence":"ACCAAAGTCGGATCTGGCGGTTTCCGAGTCAAG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCATCGGCCANNTGGTCGGGCCAAACATCATCTCCTCTCT","aligned_b":"CCATCGGCCANNTGGTCGGGCCAAACATCATCTCC-CTCT","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"75325978e190ed17e9ff06a96533285e60fb58fe5df2c20aeb775c7321005084","group_id":"27d204dd16e39eeb0f8591a829f0bfb822ae4d02351c034161106c91da8cfe69","id":"ALIGN-0006518","index":6518,"input":{"a":"CCATCGGCCANNTGGTCGGGCCAAACATCATCTCCTCTCT","b":"CCATCGGCCANNTGGTCGGGCCAAACATCATCTCCCTCT","source_sequence":"CCATCGGCCANNTGGTCGGGCCAAACATCATCTCCTCTCT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCCGTATATGTCGTCGTCGT-CCCCCACCCT","aligned_b":"TCCGTATATGTCGTCGTCGTCCCCCCACCCT","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"6815b46d5f573a59b2a7f3b4dc22fdf9b87fb5c1441d2d03619cd87023720d2b","group_id":"b7b53c37cc02e4bebf35fded2a6a39961f2512538a0fbe2ce9068d3524f3ba66","id":"ALIGN-0006521","index":6521,"input":{"a":"TCCGTATATGTCGTCGTCGTCCCCCACCCT","b":"TCCGTATATGTCGTCGTCGTCCCCCCACCCT","source_sequence":"TCCGTATATGTCGTCGTCGTCCCCCACCCT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTGTGTTAATCATCATCA-TCAATCCACCG","aligned_b":"TCTGTGTTAATCATCATCACTC-ATCCACCG","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"1babbeef1635897c2bfcf6956dc2c58c67aefd18a1b17e086c2c213e80e1453c","group_id":"42ee7c832edc6aeeb898603eef8c4d781049924279cf7eab1faf95aac4343cfa","id":"ALIGN-0006546","index":6546,"input":{"a":"TCTGTGTTAATCATCATCATCAATCCACCG","b":"TCTGTGTTAATCATCATCACTCATCCACCG","source_sequence":"TCTGTGTTAATCATCATCATCAATCCACCG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGGCATACAAGTAGTAGTAGTAGTCGACATTGC","aligned_b":"TGGCATAC-AGTAGTAGTGGTAGTCGACATTGC","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"f8fe634040a802978eabf61b30880d5afe707d51d10e02522c16594576966aef","group_id":"0fbf0ad524d2f287d905169b7b1c49dc63adbff771d30f17aa067f1d26f4387c","id":"ALIGN-0006551","index":6551,"input":{"a":"TGGCATACAAGTAGTAGTAGTAGTCGACATTGC","b":"TGGCATACAGTAGTAGTGGTAGTCGACATTGC","source_sequence":"TGGCATACAAGTAGTAGTAGTAGTCGACATTGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCGCTAAAGGAAT--AACAAATGCACACCTGTACCAGACCTCGGGGTG","aligned_b":"CACCCCGAGGTCTGGTACAGGTGTGCATTTGT--TATTCCTTTAGCGC","edit_distance":28,"within_threshold":true},"family":"reverse_complement","fingerprint":"b0370765fce3a819b17cb00a5da0bd6d3840320cc1b957610cf7dcbd7058f1d7","group_id":"3cc77341ae78857cbec618894aa4f8edcb0599cf0eb9e30780d5771ce3bf228c","id":"ALIGN-0006574","index":6574,"input":{"a":"GCGCTAAAGGAATAACAAATGCACACCTGTACCAGACCTCGGGGTG","b":"CACCCCGAGGTCTGGTACAGGTGTGCATTTGTTATTCCTTTAGCGC","source_sequence":"GCGCTAAAGGAATAACAAATGCACACCTGTACCAGACCTCGGGGTG","threshold":28},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTCGCCAGTTTTTTTTTTTTTAATGAGCATG","aligned_b":"TGTCGCCAGTTTTTTTTTTTTTTATGAGCATG","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"d8c8a817b53bef0551e604084861e03e6ed6c5602615f3d4b7e5c972b57adbb0","group_id":"c209bf19ebdebf1faabedafc155ff82648ac725d3aefce5789daca696a05ab57","id":"ALIGN-0006575","index":6575,"input":{"a":"TGTCGCCAGTTTTTTTTTTTTTAATGAGCATG","b":"TGTCGCCAGTTTTTTTTTTTTTTATGAGCATG","source_sequence":"TGTCGCCAGTTTTTTTTTTTTTAATGAGCATG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCAAATACCGGTGGGCAGGAAACGGTACAGCGG--TTT---","aligned_b":"----AA-ACCGCTGTACCGTTTCCTGCCCACCGGTATTTGAA","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"5708fa07fcd19b5875eea7f43e916645883386218a11b573fd1847261c5805dd","group_id":"41a77285674faee23d03646888d2ad86a8fb165595535d84d6f4e0ec12ec9db7","id":"ALIGN-0006589","index":6589,"input":{"a":"TTCAAATACCGGTGGGCAGGAAACGGTACAGCGGTTT","b":"AAACCGCTGTACCGTTTCCTGCCCACCGGTATTTGAA","source_sequence":"TTCAAATACCGGTGGGCAGGAAACGGTACAGCGGTTT","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTACTGTCTACCACCACCACCACCACCACCGGACCAGCT","aligned_b":"GTAATGTCTACCACCACCACCACCACCACCGGACCAGAT","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"fa5f4572d51f7b695f8733cf607d9963514485358d685f44c97530f572bc57e4","group_id":"beb9fa31873a0312ebcbae915b569d704fcc69452e45967aa0234014c1dab009","id":"ALIGN-0006591","index":6591,"input":{"a":"GTACTGTCTACCACCACCACCACCACCACCGGACCAGCT","b":"GTAATGTCTACCACCACCACCACCACCACCGGACCAGAT","source_sequence":"GTACTGTCTACCACCACCACCACCACCACCGGACCAGCT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"C-AAATCGTACATCATCATCATCATATCGCTAAT","aligned_b":"CAAAATCGTACATCATCATC-TCATATCG-GCAT","edit_distance":5,"within_threshold":true},"family":"tandem_repeat","fingerprint":"1e946476aa16ab2201ba2e53f1d85964d0e41b61ee9509f94c5f5af19e8e63a7","group_id":"9452146345af1a57b3a8ab18f3f9fef55ab8df721d9c980984eb9a9a3e26cd0a","id":"ALIGN-0006596","index":6596,"input":{"a":"CAAATCGTACATCATCATCATCATATCGCTAAT","b":"CAAAATCGTACATCATCATCTCATATCGGCAT","source_sequence":"CAAATCGTACATCATCATCATCATATCGCTAAT","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTATTAGCTNNCGTTGGCCATGGACACCTCAGGCG","aligned_b":"TGTATTAGCTNNCGTTGGCCATGGACATCTCAGGCG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"cc384c8072a60b965af718dd3147c671bd96cc0c8282e93917becd5dc5e3f3cf","group_id":"cbc0332b7eae16cd24b549d8bdf6e0952c6252b167abc3bfb2231b37d8af1315","id":"ALIGN-0006598","index":6598,"input":{"a":"TGTATTAGCTNNCGTTGGCCATGGACACCTCAGGCG","b":"TGTATTAGCTNNCGTTGGCCATGGACATCTCAGGCG","source_sequence":"TGTATTAGCTNNCGTTGGCCATGGACACCTCAGGCG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTGCACCGACCATACCCTTTACACACGAATGCACCGAA","aligned_b":"TTGCACCGACCATACCCTTTACACAC-AATGCACCGAA","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"e2714ef0554408f7b910e2ddb7908476d3f69b500a98b6458a19028cabb38ef6","group_id":"760239d9accc411fb1610cc1ed57aa2b00b64067f585f7011eb29f37b119a4a1","id":"ALIGN-0006602","index":6602,"input":{"a":"TTGCACCGACCATACCCTTTACACACGAATGCACCGAA","b":"TTGCACCGACCATACCCTTTACACACAATGCACCGAA","source_sequence":"TTGCACCGACCATACCCTTTACACACGAATGCACCGAA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATTCCCCTAGTTGTTGTTGTTGTTGTTTTCACCGAG","aligned_b":"ATTCCCCTAGTCGTTGTTGTTGTTGTTTTCACCGAG","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"ceeda5c5fae2cdf7125adff82ba219ecb654e3fb8d426791f3cc9042a075d40a","group_id":"ebce408b429032227b75e96edf46e76e5198c89abb153217da8cf73f121c9cd7","id":"ALIGN-0006611","index":6611,"input":{"a":"ATTCCCCTAGTTGTTGTTGTTGTTGTTTTCACCGAG","b":"ATTCCCCTAGTCGTTGTTGTTGTTGTTTTCACCGAG","source_sequence":"ATTCCCCTAGTTGTTGTTGTTGTTGTTTTCACCGAG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTGTCGTATAAAAAAAAAATGTTTCACAT","aligned_b":"TCTTTCGTATAAAAAAAAAATGTTTCACAT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"bde380e117055f887c7e7e4cbda3b2242f8800e5e1824df59aedee799b7565c5","group_id":"49a40ca52e20cb56ccd823606fade1d6be4c36752a810a2e92f08c33a47b3d88","id":"ALIGN-0006625","index":6625,"input":{"a":"TCTGTCGTATAAAAAAAAAATGTTTCACAT","b":"TCTTTCGTATAAAAAAAAAATGTTTCACAT","source_sequence":"TCTGTCGTATAAAAAAAAAATGTTTCACAT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTTCCGGACNNACAGATCTTTAGA","aligned_b":"TGTTCCGGACNNAC-GATCTTTA-A","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"9903ad551e1d1aca7aab33ede762fa878e6e96f9c37ace84fc67331c8818d25b","group_id":"e027d319fa35d450b80b3a9f602b6766284c04624a269987d0a721049302ce2c","id":"ALIGN-0006633","index":6633,"input":{"a":"TGTTCCGGACNNACAGATCTTTAGA","b":"TGTTCCGGACNNACGATCTTTAA","source_sequence":"TGTTCCGGACNNACAGATCTTTAGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GG-C---CCAGGCATTGCTTGTACAT-CACACAGTGTCTCACACGACC","aligned_b":"GGTCGTGTGAGACACTG--TGT-GATGTACA-AG-CAATGCCTGGGCC","edit_distance":24,"within_threshold":true},"family":"reverse_complement","fingerprint":"6f15656a6d570faecf22e6054106ba16287f50fde04da7e5584527b3f00fc608","group_id":"f09f0eab1c599ea7dce524b12e0d2a403a919f68d3609e9b837de668359e6644","id":"ALIGN-0006639","index":6639,"input":{"a":"GGCCCAGGCATTGCTTGTACATCACACAGTGTCTCACACGACC","b":"GGTCGTGTGAGACACTGTGTGATGTACAAGCAATGCCTGGGCC","source_sequence":"GGCCCAGGCATTGCTTGTACATCACACAGTGTCTCACACGACC","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTCC-TCG-TCCTGCTAAGCAGACTGATA","aligned_b":"GGTCCGTCGCCCCTGCTAAGCAG-CTGATA","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"c4557dc141225670084ec97b610d04bae595ece485bfb9f15a6e486a1c7ed358","group_id":"4d1cfa81251f05d0a1c189a55ad2f36905e13e61b7301ea475a419cc160aea05","id":"ALIGN-0006647","index":6647,"input":{"a":"GGTCCTCGTCCTGCTAAGCAGACTGATA","b":"GGTCCGTCGCCCCTGCTAAGCAGCTGATA","source_sequence":"GGTCCTCGTCCTGCTAAGCAGACTGATA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TCTTGCTGCG-GTG-GTGGTCCTGTTACC","aligned_b":"CTC-TGCTGCGCGTGCATGGTCCTGTTACC","edit_distance":5,"within_threshold":true},"family":"tandem_repeat","fingerprint":"88d13fd5f1d77f2c567ef904065796e4ec54afb0a19cd391aadb34dec3061be5","group_id":"ca66ffafc4aaafa812d3ef7b6033716ae80d2877c953cd0cbd146ee04822c34b","id":"ALIGN-0006666","index":6666,"input":{"a":"TCTTGCTGCGGTGGTGGTCCTGTTACC","b":"CTCTGCTGCGCGTGCATGGTCCTGTTACC","source_sequence":"TCTTGCTGCGGTGGTGGTCCTGTTACC","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TCCGCTGAAAGAAGAAGAAGAAGAAG-AAAAGGGATC","aligned_b":"TCCGCTGAAAG-AGAAGAAGAAGAAGAAAAAGGGATC","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"d2dd63472dd242e0900cd09128fcb2a8e362b04b79021bef093170a6c189232a","group_id":"6bb3daaf1e97d756303858028dd93a5f74e90324476862b34148e156c4fcd594","id":"ALIGN-0006681","index":6681,"input":{"a":"TCCGCTGAAAGAAGAAGAAGAAGAAGAAAAGGGATC","b":"TCCGCTGAAAGAGAAGAAGAAGAAGAAAAAGGGATC","source_sequence":"TCCGCTGAAAGAAGAAGAAGAAGAAGAAAAGGGATC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"-ATACCCATCTAGACTCTTTGTTAAGCGGTGAACA","aligned_b":"TGTTCACCGCTTAACAAAGAGTCTAGATGGGTA-T","edit_distance":21,"within_threshold":true},"family":"reverse_complement","fingerprint":"19f64468ccfd17a7791df63d8a26e89b8d2da8de38b3880d39e306cf3d03b1c6","group_id":"6dd49fef88b8cc4fa15a1a78e7a9b32d76e832f42570117964bde27255205444","id":"ALIGN-0006704","index":6704,"input":{"a":"ATACCCATCTAGACTCTTTGTTAAGCGGTGAACA","b":"TGTTCACCGCTTAACAAAGAGTCTAGATGGGTAT","source_sequence":"ATACCCATCTAGACTCTTTGTTAAGCGGTGAACA","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAACATCCGTGTTGTTGTTG-TTGTTGTTGTTACA-TGTCG","aligned_b":"CAACAT-CGTGTTGTTGTTGCTTGTTGTTGTTACACTGTCG","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"a402330cca932417894996e44f3609578a33aa6c7e07525355ccf91e91b66120","group_id":"fb6b5a29b15857edfa407445d2746c2eb1cd16e51949e4c8b1435022a888616e","id":"ALIGN-0006716","index":6716,"input":{"a":"CAACATCCGTGTTGTTGTTGTTGTTGTTGTTACATGTCG","b":"CAACATCGTGTTGTTGTTGCTTGTTGTTGTTACACTGTCG","source_sequence":"CAACATCCGTGTTGTTGTTGTTGTTGTTGTTACATGTCG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGCAGTACCGACTCCCGGGCCCCCTCTA-ACCACTCCAGCGA-AC-G-ACTG--G","aligned_b":"C--CAGT--CG-TTCGCTGGAGTGGT-TAGAGGGGGCCCGGGAGTCGGTACTGCTG","edit_distance":28,"within_threshold":true},"family":"reverse_complement","fingerprint":"959b4d0cc6dbb5c0e6c5ddf708d7ede9cd3677c39d1fc7e9ee42848d7a5ad99a","group_id":"08d897ef8a0b823620990a3d0157e5d402502ca1870107e1fbece38583666c58","id":"ALIGN-0006729","index":6729,"input":{"a":"CAGCAGTACCGACTCCCGGGCCCCCTCTAACCACTCCAGCGAACGACTGG","b":"CCAGTCGTTCGCTGGAGTGGTTAGAGGGGGCCCGGGAGTCGGTACTGCTG","source_sequence":"CAGCAGTACCGACTCCCGGGCCCCCTCTAACCACTCCAGCGAACGACTGG","threshold":28},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTAGAACCTAAAAAAAAAAACGATGCT-AAA","aligned_b":"TGTAGAACCTATAAAAAAAAACGATGCTGAAA","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"aa48fed36a1e9512c18b7aad78545e4466d370da55cc6b1af800149507ae7216","group_id":"a17acf09ef650439b9291b00eb6c0baf66099bfbf7940f48410779f221da8fc2","id":"ALIGN-0006750","index":6750,"input":{"a":"TGTAGAACCTAAAAAAAAAAACGATGCTAAA","b":"TGTAGAACCTATAAAAAAAAACGATGCTGAAA","source_sequence":"TGTAGAACCTAAAAAAAAAAACGATGCTAAA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTGGGCTTAATGATCGAATACAATCATATCCGCGC-CTCCG-TCAT","aligned_b":"AT-GAC-GGAGGCGCGGATATGATTGTATTCGATCATTAAGCCCAC","edit_distance":24,"within_threshold":true},"family":"reverse_complement","fingerprint":"170a56582a9540f437009a42285ffc7ed1f0135bbe993c295c2accfa3c9e2595","group_id":"89e27c11ff2540411761a2a08617136f847ff12a15157c8310c2b5706df289df","id":"ALIGN-0006754","index":6754,"input":{"a":"GTGGGCTTAATGATCGAATACAATCATATCCGCGCCTCCGTCAT","b":"ATGACGGAGGCGCGGATATGATTGTATTCGATCATTAAGCCCAC","source_sequence":"GTGGGCTTAATGATCGAATACAATCATATCCGCGCCTCCGTCAT","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGCCTGTGGGGT-GGTGG-TGGTGGTGGTATCATGTAT","aligned_b":"-GCCTGTGGGGTAGGTGGCTGGTGGTGGTATCATGTAT","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"ef15638d49f530afce02f818e5066954fc2b0883c7790f8efd1606d216a14be0","group_id":"8abe4fa76c8d11b36fdaec303f4f5b9b89bc9239bf4a01251e87777ca5119903","id":"ALIGN-0006756","index":6756,"input":{"a":"GGCCTGTGGGGTGGTGGTGGTGGTGGTATCATGTAT","b":"GCCTGTGGGGTAGGTGGCTGGTGGTGGTATCATGTAT","source_sequence":"GGCCTGTGGGGTGGTGGTGGTGGTGGTATCATGTAT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGCTAGGCCTCTCAGTATTCCTGCGCCCGCAGGGAGCCTG","aligned_b":"CAGCTAGGCCTCTCCGTATTCC-GCGCCCGCAGGGAGCCT-","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"f5dc7ff5f9782a36e10a757beb22bc295b935dc4778e7c9e9fa3e2248181e143","group_id":"1a97e2dd423f750f8a7c1b9c909bbf5df2bd9512b169436d1304b3921167c6eb","id":"ALIGN-0006767","index":6767,"input":{"a":"CAGCTAGGCCTCTCAGTATTCCTGCGCCCGCAGGGAGCCTG","b":"CAGCTAGGCCTCTCCGTATTCCGCGCCCGCAGGGAGCCT","source_sequence":"CAGCTAGGCCTCTCAGTATTCCTGCGCCCGCAGGGAGCCTG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GCAATTGGC-AAAAAAAAAAAGTGGGCGGAC","aligned_b":"GGCAATTGGCAAAAAAAAAAAAGT-GGCGGAC","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"47d205f65093b877727693ad87042aadc05f7201b10000c3ef50ba49cc34f818","group_id":"41899931da0f585472169d6919ca79834666a37da74771f797aa8fb42cfc405f","id":"ALIGN-0006770","index":6770,"input":{"a":"GCAATTGGCAAAAAAAAAAAGTGGGCGGAC","b":"GGCAATTGGCAAAAAAAAAAAAGTGGCGGAC","source_sequence":"GCAATTGGCAAAAAAAAAAAGTGGGCGGAC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGATCCGGGTGGTGGTGGTGGTGTAGAGAGTT","aligned_b":"AGGATCCGGGTGGTGGTGGTGGTGTGGAGAGTT","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"cd0cdfabdf66bd6912dc86cb5a18b202467d57b601b725a8fe5afeaf04810e70","group_id":"68b886397551ebd449080e48981fbbc77cd100a6d1f6056ffc0da95d9403bcf8","id":"ALIGN-0006771","index":6771,"input":{"a":"AGGATCCGGGTGGTGGTGGTGGTGTAGAGAGTT","b":"AGGATCCGGGTGGTGGTGGTGGTGTGGAGAGTT","source_sequence":"AGGATCCGGGTGGTGGTGGTGGTGTAGAGAGTT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACAGTTGC-TNNCAATATATTATGCTTCTCTCCGACTGTAAC","aligned_b":"AACAGTTGCGTNNCAATATATTATGGTTCTCTCCGACTGTAAC","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"a5c4605e861139caf834def0f3af94416ae43e6d4bd66607f80470373260ac9c","group_id":"22234da3f8c17b550e43384a2b3bd854fc24bfd823c61553bba90899a2d4c851","id":"ALIGN-0006773","index":6773,"input":{"a":"AACAGTTGCTNNCAATATATTATGCTTCTCTCCGACTGTAAC","b":"AACAGTTGCGTNNCAATATATTATGGTTCTCTCCGACTGTAAC","source_sequence":"AACAGTTGCTNNCAATATATTATGCTTCTCTCCGACTGTAAC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGACCGAAGCGGTCGATCCTGACGTATGTCGA","aligned_b":"CGA-CGAA-AGGTCGATCCTGACGTATGTCGA","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"8be84c24514a70714f61fd48d9413fda74288be521a79657574b097b8dbb9fa9","group_id":"1dc283912f1432940eb439b5eae8644bfb012081efc89cfb34ea3ff73472cb12","id":"ALIGN-0006787","index":6787,"input":{"a":"CGACCGAAGCGGTCGATCCTGACGTATGTCGA","b":"CGACGAAAGGTCGATCCTGACGTATGTCGA","source_sequence":"CGACCGAAGCGGTCGATCCTGACGTATGTCGA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCCATATAGGCTGCTGCTGCTGCTCACTTGTT-T","aligned_b":"GCCAAATAGGCTGCTGCTGCTGCTCACTTGTTGT","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"f8c98d5aa8270c86b10deb2753a5a08f893b0e6a484c96aff680ae10956a36a7","group_id":"fb9597cbd8af1eaaf4dee538a407091577259990588df2bc957913930d0875ac","id":"ALIGN-0006796","index":6796,"input":{"a":"GCCATATAGGCTGCTGCTGCTGCTCACTTGTTT","b":"GCCAAATAGGCTGCTGCTGCTGCTCACTTGTTGT","source_sequence":"GCCATATAGGCTGCTGCTGCTGCTCACTTGTTT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AA-A-GACGAG-GAAGCTTGCGTCACCATA","aligned_b":"AATAGGACGTGCGAAGCTTGCGTCACCATA","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"7edf57633158348e0c1791a2113c1a498cced1fa2ab8777b42fc3ddfa4a85703","group_id":"8d8adb1fd26e2f41781498d09a807706677ba9058dacb9bc2c82e06399cd34e4","id":"ALIGN-0006807","index":6807,"input":{"a":"AAAGACGAGGAAGCTTGCGTCACCATA","b":"AATAGGACGTGCGAAGCTTGCGTCACCATA","source_sequence":"AAAGACGAGGAAGCTTGCGTCACCATA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CACCCTGCT-ANNTCTGTGAGATGACG","aligned_b":"CACCCTGCTGANNTCTGTG-GATGACG","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"6a51da4207ccedd98529c8901df8ac038e699db3f7961321eec549560e6c3765","group_id":"ff8d0eb34484a87c8ddfc99edeb389129ce44427b488b5fabc1237e9fbfe9037","id":"ALIGN-0006828","index":6828,"input":{"a":"CACCCTGCTANNTCTGTGAGATGACG","b":"CACCCTGCTGANNTCTGTGGATGACG","source_sequence":"CACCCTGCTANNTCTGTGAGATGACG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-AGCACGCATTNNCGAGGCTG-ACAGACACCGTGACGTG","aligned_b":"GAGCACGCATTNNCGAGG-TGAACAGACACCGTGACGTG","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"109fa495082c1db2bfaac4ebcee3c8b319f5ca71935326601526271494aa6fba","group_id":"f07528c5b5cd89b9e1c310fe5d72086659514ac5313bb85cdffb72ad5033a63c","id":"ALIGN-0006843","index":6843,"input":{"a":"AGCACGCATTNNCGAGGCTGACAGACACCGTGACGTG","b":"GAGCACGCATTNNCGAGGTGAACAGACACCGTGACGTG","source_sequence":"AGCACGCATTNNCGAGGCTGACAGACACCGTGACGTG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CT-CTTAATGCTTCTTCTTGTTTCGCCA","aligned_b":"CTCCTTATTGCTTCTTCTTGTTTCGCCA","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"f5c553a4cc77f17fad3c799b54e5b4da185ec71e9aed4da13891569b5778aeba","group_id":"f0c18751d8c0f471197c86f18b85a924067cc5a6f261ca03a57f28c266bcafe5","id":"ALIGN-0006846","index":6846,"input":{"a":"CTCTTAATGCTTCTTCTTGTTTCGCCA","b":"CTCCTTATTGCTTCTTCTTGTTTCGCCA","source_sequence":"CTCTTAATGCTTCTTCTTGTTTCGCCA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTAGCACC-ATCATCATC-ATCATCATCATCCGGGGAGTT","aligned_b":"AGTAGCACCAATCATCATCTATCATCATCATCCGGGGAGTT","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"f519e881cc76b1d9a55a20bb29d09c119b2a5af0fc7af95f8a42448e38918239","group_id":"83e5ad2998deb217bdf07bef01cf59e85c773faf3328f67549385c8e8637891a","id":"ALIGN-0006851","index":6851,"input":{"a":"AGTAGCACCATCATCATCATCATCATCATCCGGGGAGTT","b":"AGTAGCACCAATCATCATCTATCATCATCATCCGGGGAGTT","source_sequence":"AGTAGCACCATCATCATCATCATCATCATCCGGGGAGTT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTGAGTTAA-TNNGTTA-AGGCACATTTGCGACCGGACACAAACGCGAA","aligned_b":"TTGAGTTAACTNNGTTACAGGCACATTTGCGACCGGACACAAACGCGAA","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"eaadd5759292850b5fbd108610a41c6c909059268af6c929ce484a316d0d7378","group_id":"78d96f972f74673bb797ab25e1c25a1622beb55ab29ee53d4be177f2b7af9be9","id":"ALIGN-0006853","index":6853,"input":{"a":"GTGAGTTAATNNGTTAAGGCACATTTGCGACCGGACACAAACGCGAA","b":"TTGAGTTAACTNNGTTACAGGCACATTTGCGACCGGACACAAACGCGAA","source_sequence":"GTGAGTTAATNNGTTAAGGCACATTTGCGACCGGACACAAACGCGAA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTT-TTAGTAGCAG-C-AGCTCGATAATC","aligned_b":"TCTTGGTAGTAGCAGACGAGCTCGATAATC","edit_distance":4,"within_threshold":false},"family":"tandem_repeat","fingerprint":"d89f4389f30580c958d0ed3f2c569852443d2a0d954b0dd0e641c430c5bcd6b1","group_id":"8ef8a7cf5638cdfb7f54eff0699b5c47edd969106838f48acc2a1cddf18d18e5","id":"ALIGN-0006861","index":6861,"input":{"a":"TCTTTTAGTAGCAGCAGCTCGATAATC","b":"TCTTGGTAGTAGCAGACGAGCTCGATAATC","source_sequence":"TCTTTTAGTAGCAGCAGCTCGATAATC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGTTGAACACCGGGTTACTATCAC--TGTT-TTGA-","aligned_b":"----TCAAAACAGTGATAGTAACCCGGTGTTCAACAG","edit_distance":19,"within_threshold":true},"family":"reverse_complement","fingerprint":"f78dc5aef771c6fef00a3cd381f5014a7a51f120629b00c968ea52faaea3c6bc","group_id":"2c33da65312e07c41202713226aae4acc40e935f21e32ad13786c7321fbd9010","id":"ALIGN-0006879","index":6879,"input":{"a":"CTGTTGAACACCGGGTTACTATCACTGTTTTGA","b":"TCAAAACAGTGATAGTAACCCGGTGTTCAACAG","source_sequence":"CTGTTGAACACCGGGTTACTATCACTGTTTTGA","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGCCCCGCA-GGG-GGGGGGGGGGGGCGGTACGAGG","aligned_b":"GGCCCCGCAGGGGTGGGGGGGGGGGGCGGTACGAGG","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"c1c34a50f9393c411a641c5f943803047c3aff92a3344873bd381fe19de306d8","group_id":"9a70f099d5b3fc2c6bb362f296d101d87397e7537d50266ed4a54d2943ef29b3","id":"ALIGN-0006885","index":6885,"input":{"a":"GGCCCCGCAGGGGGGGGGGGGGGGCGGTACGAGG","b":"GGCCCCGCAGGGGTGGGGGGGGGGGGCGGTACGAGG","source_sequence":"GGCCCCGCAGGGGGGGGGGGGGGGCGGTACGAGG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTAAGAACG-TG-GTGGTGGT-GGCGCGATCC","aligned_b":"AGTAAGCACGCTGAGTGGTGGTACGCGCGATCC","edit_distance":5,"within_threshold":false},"family":"tandem_repeat","fingerprint":"35a150a23c2a10313e921b98f780234fc8c706e860a48b276cf2f020d689a94a","group_id":"5eb93d4f0a733fd84f916ad10b081f58ec04f12bbf4d50ec9e8c4a1067840c7b","id":"ALIGN-0006896","index":6896,"input":{"a":"AGTAAGAACGTGGTGGTGGTGGCGCGATCC","b":"AGTAAGCACGCTGAGTGGTGGTACGCGCGATCC","source_sequence":"AGTAAGAACGTGGTGGTGGTGGCGCGATCC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGCCTTAGCGCTAGTACACATGTAAAAACC","aligned_b":"GGTTTTTACATGTGTACTAGCGCTAAGGCG","edit_distance":18,"within_threshold":true},"family":"reverse_complement","fingerprint":"243b74785e7f3223bf2786fcf990dfc3399b18577b952467c6673ac393aa45e4","group_id":"90c6bd2b3f62b292c82e1bf80d2bba381375a2641cf09811c0e4c700012fff47","id":"ALIGN-0006904","index":6904,"input":{"a":"CGCCTTAGCGCTAGTACACATGTAAAAACC","b":"GGTTTTTACATGTGTACTAGCGCTAAGGCG","source_sequence":"CGCCTTAGCGCTAGTACACATGTAAAAACC","threshold":18},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"G-TAGTGCGTTCATCATCATCATCATCACAATGGGGC","aligned_b":"GTTAGTGCTGTCATCATCATCATCATCACAAT-GGGC","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"8bf4601471bea2a22e0a0f46d069cf2286f49efeb408e42d0260851fa999d423","group_id":"185bb5999f3d455b2bbbe37443fde83aa72646f49b12523c7c31adde5ec97389","id":"ALIGN-0006906","index":6906,"input":{"a":"GTAGTGCGTTCATCATCATCATCATCACAATGGGGC","b":"GTTAGTGCTGTCATCATCATCATCATCACAATGGGC","source_sequence":"GTAGTGCGTTCATCATCATCATCATCACAATGGGGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCTCTATACTGTTGTTGTTGTTGTAAGCAGTTG","aligned_b":"GCTCTATACTGTTGTTGTTGTTG-AAGCAGTTG","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"cd45764f97a431628325503ee82afc858d4c7f78e3cb892f6bbc9a9b40d878b7","group_id":"b78d7d051dc00199baab0be1851509e0d1aae08ea6aac24e14e2b4ffcb4ae84a","id":"ALIGN-0006911","index":6911,"input":{"a":"GCTCTATACTGTTGTTGTTGTTGTAAGCAGTTG","b":"GCTCTATACTGTTGTTGTTGTTGAAGCAGTTG","source_sequence":"GCTCTATACTGTTGTTGTTGTTGTAAGCAGTTG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTACCGTGAGATGATGATGATGATGATGATTTCGGCCCC","aligned_b":"CTACCGTGAGATGATGATGATGATGATGATTTCGGCCCC","edit_distance":0,"within_threshold":true},"family":"tandem_repeat","fingerprint":"0d4867c3deb658c6359993beb237f18d723692f14c9a1f11f3a5f05431ab506f","group_id":"63fe0e7fe8dc8594ae652dc470ed86a237cc900c5472df2decf101a9391d6550","id":"ALIGN-0006916","index":6916,"input":{"a":"CTACCGTGAGATGATGATGATGATGATGATTTCGGCCCC","b":"CTACCGTGAGATGATGATGATGATGATGATTTCGGCCCC","source_sequence":"CTACCGTGAGATGATGATGATGATGATGATTTCGGCCCC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTCGCCTCCAACAACAACAAGACGGGATT","aligned_b":"TGTCGCTTCCAACAACAACAAGACGGGATT","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"d802ea5017e3cbcc14358ee5bdb7ab774531741e22172ddb2d8e59d57b14c848","group_id":"56f4f4afe08e699521f55a985d34c2078af391fb8f9b426fe64feca64cdc22ad","id":"ALIGN-0006921","index":6921,"input":{"a":"TGTCGCCTCCAACAACAACAAGACGGGATT","b":"TGTCGCTTCCAACAACAACAAGACGGGATT","source_sequence":"TGTCGCCTCCAACAACAACAAGACGGGATT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTGCGTCCANNC-GCTTGTATTCTAAATACCATATGATGGGT","aligned_b":"T-TGCGTCCANNCAGC-TGTATTCTAAATACCATATGATGGGT","edit_distance":3,"within_threshold":false},"family":"literal_N","fingerprint":"e12b013e061291d4ec0fd3da137d7f8e72dc150da02017a2d152ffd92403209a","group_id":"127691a348b868e3183fb84eee1febc1270a1b7da1782d15b586b9e6ec6e7f53","id":"ALIGN-0006923","index":6923,"input":{"a":"TGTGCGTCCANNCGCTTGTATTCTAAATACCATATGATGGGT","b":"TTGCGTCCANNCAGCTGTATTCTAAATACCATATGATGGGT","source_sequence":"TGTGCGTCCANNCGCTTGTATTCTAAATACCATATGATGGGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCTCAAATGGA-GGAGGAGGAGGGCCTTCCA","aligned_b":"GCTCAAA-GGAGGGAGGAGGAGGCCCTTCCA","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"1ba641ee8f4b41cec501bbfdb81be86e2efae9963e7a0848374e03aca3911d62","group_id":"5c96c26731b7a73064e9708a5fae8cbb88ea7effabfd3d69daa18b7e5d49cc9c","id":"ALIGN-0006931","index":6931,"input":{"a":"GCTCAAATGGAGGAGGAGGAGGGCCTTCCA","b":"GCTCAAAGGAGGGAGGAGGAGGCCCTTCCA","source_sequence":"GCTCAAATGGAGGAGGAGGAGGGCCTTCCA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAAGAACACACCCCCCCCCC-CCGGT-CCA-TCCA","aligned_b":"G-AGAACACACCCCCCCCCCACCGGTACCATTCCA","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"75e7260ad2f2f261f25cac9f469212631e6292b3ca276fa43366d9b55579540c","group_id":"b65b28fb94809f0d591d0b31f6ab9f0f0610af325ae2e95e143405af9d27ed2a","id":"ALIGN-0006935","index":6935,"input":{"a":"GAAGAACACACCCCCCCCCCCCGGTCCATCCA","b":"GAGAACACACCCCCCCCCCACCGGTACCATTCCA","source_sequence":"GAAGAACACACCCCCCCCCCCCGGTCCATCCA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCTAGGCCGGTCGTCGTCCCACATAGG","aligned_b":"CCTAGGCCGGTCGGCG-CCCACATAGG","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"e74085e0ac0efde577cbe4ee98955fcf1114036bfb815df319570800c207ab73","group_id":"45305b8d5a51716ebe9a66535e034644e5d610a9f6284a18d29e364e12af060d","id":"ALIGN-0006946","index":6946,"input":{"a":"CCTAGGCCGGTCGTCGTCCCACATAGG","b":"CCTAGGCCGGTCGGCGCCCACATAGG","source_sequence":"CCTAGGCCGGTCGTCGTCCCACATAGG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTAG-CAGCGGGCTAATCTTATC-CTCATAGCCG","aligned_b":"TTCGACAGCGGGCTAATCTTATCGCTCATAGCCG","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"026042500071f2211c5056345cd7ad5c219b86da4880b68f36deef4a9403d3ec","group_id":"40ac292f5adba3ddee7634c5ff5569933dcf73c00d05bbd50dd4b716678fdc06","id":"ALIGN-0006947","index":6947,"input":{"a":"TTAGCAGCGGGCTAATCTTATCCTCATAGCCG","b":"TTCGACAGCGGGCTAATCTTATCGCTCATAGCCG","source_sequence":"TTAGCAGCGGGCTAATCTTATCCTCATAGCCG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCCCACCCAACCCGCGCTCG-ACCCTCACCAATGGAACGTAACTAG","aligned_b":"TTCCCACCCAACCCGCGCTCGCACCCTCAGCAATGGAACGTAACTAG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"1ce13c67b6f2cabb88ea3b5fce6e9420dee71f5526a8aab9e60bd02d5d469456","group_id":"bf61435944ed92d94d9c94bf5a380ee8d7fbc3865e525840aadb5f9ace47cc86","id":"ALIGN-0006957","index":6957,"input":{"a":"TTCCCACCCAACCCGCGCTCGACCCTCACCAATGGAACGTAACTAG","b":"TTCCCACCCAACCCGCGCTCGCACCCTCAGCAATGGAACGTAACTAG","source_sequence":"TTCCCACCCAACCCGCGCTCGACCCTCACCAATGGAACGTAACTAG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCACTC-GTTCNNCTATGCCCGCACCGCCCCGATATTCG-ACCCTTTA","aligned_b":"TCACTCAGTTCNNC-ATGCCCGCACCGCCCCGATATTCGAACCCTTTA","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"d89ae9d2c3db5bccbd91c5dd3a7d249755ff30470c2ae8974efacfa29ba49989","group_id":"c85e61ad08c0db2fcb78d8575e42c49f84be7a4254b88bdc2b8537219c36801f","id":"ALIGN-0006963","index":6963,"input":{"a":"TCACTCGTTCNNCTATGCCCGCACCGCCCCGATATTCGACCCTTTA","b":"TCACTCAGTTCNNCATGCCCGCACCGCCCCGATATTCGAACCCTTTA","source_sequence":"TCACTCGTTCNNCTATGCCCGCACCGCCCCGATATTCGACCCTTTA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTCATCG-CGNNAACGGCTATCACCCCTTAGATAAAGGA","aligned_b":"TCTCATCGTCGNNAANGGCTATCACCCCTTAGATAAAGGA","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"f80a5531a8bc58861a21215e881813a74c339bddf93467de27bcd499ad040df4","group_id":"268977e1fbbb59cc60711871844de28fd2fd335a74ce1b9fb3a023309ed5d137","id":"ALIGN-0006973","index":6973,"input":{"a":"TCTCATCGCGNNAACGGCTATCACCCCTTAGATAAAGGA","b":"TCTCATCGTCGNNAANGGCTATCACCCCTTAGATAAAGGA","source_sequence":"TCTCATCGCGNNAACGGCTATCACCCCTTAGATAAAGGA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CC-TCTGCTTATTTTTTTTTTTTTTTTTGCCAGGCGT","aligned_b":"CCTTCTGC-TA--TTTTTTTTTTTTTTTGCCAGTCGT","edit_distance":5,"within_threshold":true},"family":"homopolymer","fingerprint":"a3fb392827719780c0ff91743677e834d4ad656297b0cdfe68753daeff8773f5","group_id":"1dc19d69e79366b0bec39703c8970400b50dfa4a5cbda6773a456f6a049985fa","id":"ALIGN-0006975","index":6975,"input":{"a":"CCTCTGCTTATTTTTTTTTTTTTTTTTGCCAGGCGT","b":"CCTTCTGCTATTTTTTTTTTTTTTTGCCAGTCGT","source_sequence":"CCTCTGCTTATTTTTTTTTTTTTTTTTGCCAGGCGT","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAGCGGGTTCGCGGGGTACCTTTGCAGCGATA-CACATG--TCAGGAA","aligned_b":"-TTCCTG-AC-ATGTGTATCGCTGCAAAGGTACCCCGCGAACCCGCTT","edit_distance":28,"within_threshold":true},"family":"reverse_complement","fingerprint":"0d6786d41e02572022017d06016bef3758ccc48989bd1eb58407577ee86dbb7f","group_id":"8ec4b3f742301475050a8c5cbaee584d6565ec1cef4b9a80683ccf441bb68cb5","id":"ALIGN-0006989","index":6989,"input":{"a":"AAGCGGGTTCGCGGGGTACCTTTGCAGCGATACACATGTCAGGAA","b":"TTCCTGACATGTGTATCGCTGCAAAGGTACCCCGCGAACCCGCTT","source_sequence":"AAGCGGGTTCGCGGGGTACCTTTGCAGCGATACACATGTCAGGAA","threshold":29},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TTGTTCGATAN-NCGCATGTAACATT","aligned_b":"GTTG-TCGATANCNCGCATGGAATATT","edit_distance":5,"within_threshold":false},"family":"literal_N","fingerprint":"aaf055c8648ba6e863521678597c0804da784debd80cbd9d9c4ab6897ac85788","group_id":"47d167e7b83e7f5d576dedd0f7857b497041d80d6829dcda7807508916cd390a","id":"ALIGN-0007003","index":7003,"input":{"a":"TTGTTCGATANNCGCATGTAACATT","b":"GTTGTCGATANCNCGCATGGAATATT","source_sequence":"TTGTTCGATANNCGCATGTAACATT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTGGATCA-T-AACGCAGCAGATCCCAAGGGAACCTCTGCCTGGACTG-TCC--","aligned_b":"--GGA-CAGTCCAGGCAGAGGTTCCCTTGGGATCTGCTGCGT-TA-TGATCCAA","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"f960ea8453da58136de34046693b09cd60692136ac6be20a5ba20c9e3ec0dbe6","group_id":"be87b1892d27567d0a01660ef7ad949a20407a20e5552e733117ac8ab0681a81","id":"ALIGN-0007004","index":7004,"input":{"a":"TTGGATCATAACGCAGCAGATCCCAAGGGAACCTCTGCCTGGACTGTCC","b":"GGACAGTCCAGGCAGAGGTTCCCTTGGGATCTGCTGCGTTATGATCCAA","source_sequence":"TTGGATCATAACGCAGCAGATCCCAAGGGAACCTCTGCCTGGACTGTCC","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAATAATTTT-CCCCCCCCCCCCCCCCCGGTG-CATC","aligned_b":"TAATAATTTTCCCCCCCCCCCCCCCCCCGGTGTCATC","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"3015c0db7df5b4e8fd389a1b0390beb750cc0a19e4c96e5e1fa2a48fcd92229b","group_id":"87b13d337b24f20b252ac197652bc4508efabe2fa8dd695e2234ac0e98272f35","id":"ALIGN-0007010","index":7010,"input":{"a":"TAATAATTTTCCCCCCCCCCCCCCCCCGGTGCATC","b":"TAATAATTTTCCCCCCCCCCCCCCCCCCGGTGTCATC","source_sequence":"TAATAATTTTCCCCCCCCCCCCCCCCCGGTGCATC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGAAG-CGTCGAAAAAAAAAATTATGTATT","aligned_b":"CGAAGACG-CGAAAAAAAAAATTATCTATT","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"ea75fa74b7dd60c7f98d25ddf333aa388f1d84423d2dfdecc2377eaa7b669b8f","group_id":"a106a4f378c20cf1fc1818d63de59546b48734cb0db7e64e4843734bb0078c93","id":"ALIGN-0007015","index":7015,"input":{"a":"CGAAGCGTCGAAAAAAAAAATTATGTATT","b":"CGAAGACGCGAAAAAAAAAATTATCTATT","source_sequence":"CGAAGCGTCGAAAAAAAAAATTATGTATT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTAATGAGAATC-CCCG-CTGAT-AGACTCCCGCCAC-CA-TCT","aligned_b":"-AGATG-GTGGCGGGAGTCT-ATCAG-C-GGGGATTCTCATTAA","edit_distance":26,"within_threshold":true},"family":"reverse_complement","fingerprint":"8477f0ce7493f92acb6834e73e53f1fe574a57f618aff757afaf186abbd89cfa","group_id":"48bd57b5ae842bc71262f31180b231629594bd65b44be402b79d179a9d96dc61","id":"ALIGN-0007019","index":7019,"input":{"a":"TTAATGAGAATCCCCGCTGATAGACTCCCGCCACCATCT","b":"AGATGGTGGCGGGAGTCTATCAGCGGGGATTCTCATTAA","source_sequence":"TTAATGAGAATCCCCGCTGATAGACTCCCGCCACCATCT","threshold":27},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACG-TTGGGGAACGTCCGAGATGGGTCTCTACGCATGCAG","aligned_b":"CTGCATGCGTAGAGACCCATCTCGGACGTTCCCCA-ACGT","edit_distance":22,"within_threshold":false},"family":"reverse_complement","fingerprint":"25546b90a2955187680a9f3a03914002608c7a316b082ac636c3b819c63d0a71","group_id":"271ec2b578b41fbebb946b79c1468ccbefc639fff8992ef1d042f5710252a812","id":"ALIGN-0007024","index":7024,"input":{"a":"ACGTTGGGGAACGTCCGAGATGGGTCTCTACGCATGCAG","b":"CTGCATGCGTAGAGACCCATCTCGGACGTTCCCCAACGT","source_sequence":"ACGTTGGGGAACGTCCGAGATGGGTCTCTACGCATGCAG","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAAAAAGATTTCCAGGTAGGCTTGCGGCGG","aligned_b":"AAAAAAGATTTCCAGGTAGGCTT-CGGCGG","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"eb83d2eec09914670fbec203aa31e2f01d697e9c1d58442e9ada067a5812cd6e","group_id":"63a8c569a4ae0fe4ed9dcaeafe55e92ef02f4cbc4700ded5c959b1f572b2bba5","id":"ALIGN-0007047","index":7047,"input":{"a":"AAAAAAGATTTCCAGGTAGGCTTGCGGCGG","b":"AAAAAAGATTTCCAGGTAGGCTTCGGCGG","source_sequence":"AAAAAAGATTTCCAGGTAGGCTTGCGGCGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGCGCATTGGNNGTACGCTGTGGGCCGTGGGCGACAGA-CCAGTTGGAAG","aligned_b":"GGCGCATTGGNNGTACGCTGTGGGCCGTGGGCGACAGAGCCAGTTGGAAG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"bd0619d19a216e7ae8ccecfc24336871f1fa399a54763ef22b8b6e235f6ac180","group_id":"b2a9ae2bcec365a6a811bb331458dfee373b04163d122d42fbd17138ad517b8d","id":"ALIGN-0007078","index":7078,"input":{"a":"GGCGCATTGGNNGTACGCTGTGGGCCGTGGGCGACAGACCAGTTGGAAG","b":"GGCGCATTGGNNGTACGCTGTGGGCCGTGGGCGACAGAGCCAGTTGGAAG","source_sequence":"GGCGCATTGGNNGTACGCTGTGGGCCGTGGGCGACAGACCAGTTGGAAG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACTG-CGTACCCCCCCCCCCCCCCATGTGCTTTG","aligned_b":"ACTGTCGTACCCCCCCCCCCCCCCATGTGCTTTG","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"3d6132408801503d8d7abb4de84b470c7bbe6e29a490e7a30e14864b5811c110","group_id":"033498c5d3add91b4eb36adbb8ad99e296e80d3d0a270a586807445889af4c31","id":"ALIGN-0007090","index":7090,"input":{"a":"ACTGCGTACCCCCCCCCCCCCCCATGTGCTTTG","b":"ACTGTCGTACCCCCCCCCCCCCCCATGTGCTTTG","source_sequence":"ACTGCGTACCCCCCCCCCCCCCCATGTGCTTTG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTCGATTCATGATGATGATGATGATGATGAG-CTGCCTC","aligned_b":"GTTCGATTCATGATGATGAT-ATGATGATGAGCCTGGCTC","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"8716fae56816f25b53aaf3666e5ee0e8dabdf257772bccba23fb7c1c0d169f58","group_id":"ceec25193028005463998186bcf53dbb95d77c4babefc93d90275b97c6ba91dd","id":"ALIGN-0007101","index":7101,"input":{"a":"GTTCGATTCATGATGATGATGATGATGATGAGCTGCCTC","b":"GTTCGATTCATGATGATGATATGATGATGAGCCTGGCTC","source_sequence":"GTTCGATTCATGATGATGATGATGATGATGAGCTGCCTC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TG-TATAGACANNTTTTACCGGCAAGTG-GTATCTTCACCGCCATG","aligned_b":"NGTTATAGACANN-TTTACCGGCAAGTGCGTATCTTCACCGCCATG","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"09a70a63fcb09f1ba74f435873c345d9a36e792727bb22dddaf8b5414614082f","group_id":"f94f31d9f74d7f639ffa2081b4408f352e4c0e9b209b30ff09f46967d5535518","id":"ALIGN-0007113","index":7113,"input":{"a":"TGTATAGACANNTTTTACCGGCAAGTGGTATCTTCACCGCCATG","b":"NGTTATAGACANNTTTACCGGCAAGTGCGTATCTTCACCGCCATG","source_sequence":"TGTATAGACANNTTTTACCGGCAAGTGGTATCTTCACCGCCATG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTAGAGTGGAGGGGGGGGGGGGAGCTTCTTGA","aligned_b":"TTAGAGTGGA-GGGGGGGGGGGAGCTTCCTGA","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"ce5e6169a70d56354e901ab50f253d0888b6873a2584149b3c19e87ebee78f8a","group_id":"e8c477a7300467d302a39f136eda119e32e1a0400dbd6a2874a503d881f7ebec","id":"ALIGN-0007120","index":7120,"input":{"a":"TTAGAGTGGAGGGGGGGGGGGGAGCTTCTTGA","b":"TTAGAGTGGAGGGGGGGGGGGAGCTTCCTGA","source_sequence":"TTAGAGTGGAGGGGGGGGGGGGAGCTTCTTGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAGCCCTTTATAACTATGCCCAGAATTTGTCAGCGAAATAACC","aligned_b":"TAG--CTTTATAACTATGCCCAGAATTTGTCAGCG-AATAACC","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"82760fad5b22f780f0af355b2e17a9c20f16f9ccffd803d4cdd5440013bece8b","group_id":"82be4ccb14351e33619560dd72c9e074d00abcdcb748c5b0a5b7b3d9da2637d4","id":"ALIGN-0007142","index":7142,"input":{"a":"TAGCCCTTTATAACTATGCCCAGAATTTGTCAGCGAAATAACC","b":"TAGCTTTATAACTATGCCCAGAATTTGTCAGCGAATAACC","source_sequence":"TAGCCCTTTATAACTATGCCCAGAATTTGTCAGCGAAATAACC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGGGCTTACANNG-ACCCGGGAG-CA","aligned_b":"GGGGCTTACANNGTACCCGGGAGACA","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"0ba23a8b55677e749b83849b8386faf6a0f1552678af24c477b4cec8b4f89231","group_id":"62f8b5e30406574669d87bed088b41c67dbde8f0acdc103ceca5cb2372de3228","id":"ALIGN-0007148","index":7148,"input":{"a":"GGGGCTTACANNGACCCGGGAGCA","b":"GGGGCTTACANNGTACCCGGGAGACA","source_sequence":"GGGGCTTACANNGACCCGGGAGCA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-AAA-CCAAGAGTAGTACTAACTCTCG","aligned_b":"AAAATCAAAGA-TAGTACTAACTCTCG","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"8b40846658bb57f0d508999161c157d2436eb01ac7a6f234e4e9a9ebeb516582","group_id":"4346171da98c6903f390d3a62ded8cc8002d96ace23daf5b8ba611c4aec70703","id":"ALIGN-0007162","index":7162,"input":{"a":"AAACCAAGAGTAGTACTAACTCTCG","b":"AAAATCAAAGATAGTACTAACTCTCG","source_sequence":"AAACCAAGAGTAGTACTAACTCTCG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGCATAATTAACAGTTGGATCTGAATATTCATCAACAACTGAGCCTTTC","aligned_b":"CGCATAATTAACAGTTGGATCTGAATATTCATC-ACAACTGAGCCTTTC","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"83ecb4cc1f9f201cc6dc6d538a146202ab193f0eb28e8e5929ad7353a3d79e11","group_id":"e09421bdfeeadc08cfdf71cd1a98b3644ccfa0764e4864b04ed77c65b8f8d360","id":"ALIGN-0007167","index":7167,"input":{"a":"CGCATAATTAACAGTTGGATCTGAATATTCATCAACAACTGAGCCTTTC","b":"CGCATAATTAACAGTTGGATCTGAATATTCATCACAACTGAGCCTTTC","source_sequence":"CGCATAATTAACAGTTGGATCTGAATATTCATCAACAACTGAGCCTTTC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATGTCGGGTGCCGATTTACGTAACTGCGTGCAGC","aligned_b":"ATGTCGGGTGCCGTTTTACGTAACTG-GTGCAGC","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"d2d7b0c3f5903d4aa7a58552a16a832519c78b6ec816e7d06d00283556c97b75","group_id":"f935d3296acac0dc06c731c78744df6af2a4c2de2685817882879b3effefc232","id":"ALIGN-0007172","index":7172,"input":{"a":"ATGTCGGGTGCCGATTTACGTAACTGCGTGCAGC","b":"ATGTCGGGTGCCGTTTTACGTAACTGGTGCAGC","source_sequence":"ATGTCGGGTGCCGATTTACGTAACTGCGTGCAGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TA--ATG-AAAACTTTGACTTGTAGGCGCTTGGCACCGTA","aligned_b":"TACGGTGCCAAGCGCCTACAAGTCAAAG-TTTTCA--TTA","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"292de65dcc53b7cc71819c9c8a421c2d16babf2525adaa97785b0c044907e46f","group_id":"2e071a19e50855347e6ef92453803c879b5e7c0ef38cbdc13f083b67c7d279e6","id":"ALIGN-0007179","index":7179,"input":{"a":"TAATGAAAACTTTGACTTGTAGGCGCTTGGCACCGTA","b":"TACGGTGCCAAGCGCCTACAAGTCAAAGTTTTCATTA","source_sequence":"TAATGAAAACTTTGACTTGTAGGCGCTTGGCACCGTA","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GACTAGAAGAAAAAAAAAAAATACGCTGACC","aligned_b":"GACTAGAAGAAAAGAATAAAATACGCTGACC","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"0db46be3ec656efcc7e838f36fbf446a812b9c7ba3ae77a9e068f162017d6256","group_id":"6021612162f8092d9e6444efff2185e21d9884073df7deba81614920fae6d9e0","id":"ALIGN-0007215","index":7215,"input":{"a":"GACTAGAAGAAAAAAAAAAAATACGCTGACC","b":"GACTAGAAGAAAAGAATAAAATACGCTGACC","source_sequence":"GACTAGAAGAAAAAAAAAAAATACGCTGACC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATTGAAGTTCNNCGTCGGAGATCTTC-TTATCC","aligned_b":"ATTGAAGTTCNNCGTCGGAGATCTTCTTTATCC","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"a967c9cd53d65f963672a420c4ab1145870820e87a099d7876c37a31299701bf","group_id":"e0634949fe83ad0d999cf7110a642d503fc397d137769d7a6c7eca8b96a9c093","id":"ALIGN-0007223","index":7223,"input":{"a":"ATTGAAGTTCNNCGTCGGAGATCTTCTTATCC","b":"ATTGAAGTTCNNCGTCGGAGATCTTCTTTATCC","source_sequence":"ATTGAAGTTCNNCGTCGGAGATCTTCTTATCC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAGAATTTACCGGAGCTTGTGGGCACAA","aligned_b":"TTGTGCCCACAAGCTCCGGTAAATTCTC","edit_distance":20,"within_threshold":true},"family":"reverse_complement","fingerprint":"79b9cac417f87b097647e8d51acb9d3564c4e7bd1d232710a8bd82fec5a33584","group_id":"738926a96368ffe96b470f7a37ff1e3dd7259317f4ef4a1f395c935800251c1e","id":"ALIGN-0007249","index":7249,"input":{"a":"GAGAATTTACCGGAGCTTGTGGGCACAA","b":"TTGTGCCCACAAGCTCCGGTAAATTCTC","source_sequence":"GAGAATTTACCGGAGCTTGTGGGCACAA","threshold":21},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TATTCACACAGAAGAAGAAGAAGAAGAGGTTTTATG","aligned_b":"TATTCACACAAAAGAAGAAGAAGAAGAGGTTTAATG","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"9803f32905995fafe72cd729a8de7cc72e35199546cb089a20cf6b4fafb3dc69","group_id":"2e9f2da91e6435a473cf4324c7d5a536073894214006d05e90f7569f4068bbc0","id":"ALIGN-0007251","index":7251,"input":{"a":"TATTCACACAGAAGAAGAAGAAGAAGAGGTTTTATG","b":"TATTCACACAAAAGAAGAAGAAGAAGAGGTTTAATG","source_sequence":"TATTCACACAGAAGAAGAAGAAGAAGAGGTTTTATG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CATGATTATGAAAAAAAAAAAAAAAAACGGGTTGC","aligned_b":"CCTGATTATGAAAAAAAAAAAAAAAAACGGGTTGC","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"ccbca7fc76104bb3efb6272f11287437f30c9262f87c487c23d082e1b861a5c9","group_id":"f848c7b920387d2f0589e6238fb9c5db5a2cacae4317e1cdb2c12b71f5caa495","id":"ALIGN-0007320","index":7320,"input":{"a":"CATGATTATGAAAAAAAAAAAAAAAAACGGGTTGC","b":"CCTGATTATGAAAAAAAAAAAAAAAAACGGGTTGC","source_sequence":"CATGATTATGAAAAAAAAAAAAAAAAACGGGTTGC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"GAAACGACTANN-GTGGGCCAGTCGGTCCTTGCC","aligned_b":"GAAAC-ACTANNAGTGGGCCAGTCGGTCCTTGCC","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"46bdef5f1e65fbcb13418e12d980a3be197d8783bd24ff153cce4075997adca4","group_id":"abd6e04bc38807c9ba9403ee9b8a32baf192b08622ef09466d95ffcd9320e455","id":"ALIGN-0007393","index":7393,"input":{"a":"GAAACGACTANNGTGGGCCAGTCGGTCCTTGCC","b":"GAAACACTANNAGTGGGCCAGTCGGTCCTTGCC","source_sequence":"GAAACGACTANNGTGGGCCAGTCGGTCCTTGCC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGAAATTAGTNNGCGTTCTCCGCGCGAA","aligned_b":"TGAAATTAATNNGCGTTCTCCGCGCGAA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"517573ce26cdef0842a8d90c9775c60be4ad68fbe86b92f5b9ad1345a41c1c3b","group_id":"1d6d2dfb04a97d63dd207dbe2cbffe1deb669b3cc6f1f3c880024b4dfb6003be","id":"ALIGN-0007418","index":7418,"input":{"a":"TGAAATTAGTNNGCGTTCTCCGCGCGAA","b":"TGAAATTAATNNGCGTTCTCCGCGCGAA","source_sequence":"TGAAATTAGTNNGCGTTCTCCGCGCGAA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGAGTCTTGTNNTGGGAAT-CCAGGCCCCCATGGTGTATGGCTTG","aligned_b":"GGAGTCTTGTNNTGGGAATGCCAGGCCCCCATGGTGTATGGCTTG","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"5f079fcd2ad021ff4f455edd8b4e72bdcaa410227db2fedcda1faba8e779f5f1","group_id":"2849e9e9c88b047e98a386b2168d42d8164fb3d5c096271f41443409c37acba9","id":"ALIGN-0007428","index":7428,"input":{"a":"GGAGTCTTGTNNTGGGAATCCAGGCCCCCATGGTGTATGGCTTG","b":"GGAGTCTTGTNNTGGGAATGCCAGGCCCCCATGGTGTATGGCTTG","source_sequence":"GGAGTCTTGTNNTGGGAATCCAGGCCCCCATGGTGTATGGCTTG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATCGTGACCGCACGTCATTCGTAGACTGCTCTTGCCATGTG","aligned_b":"GATCGTG-CCGCACGTCATTCGTAGACTGCTCTTGCCATGTG","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"9d12b1f7ed16186678f62c37ea08405c0a7785ee430b87a40b7627b057e18c85","group_id":"77c0915d079b1172b7081c4cfa4183eb714d83b753fef885ca052d09bb4c7bf2","id":"ALIGN-0007467","index":7467,"input":{"a":"GATCGTGACCGCACGTCATTCGTAGACTGCTCTTGCCATGTG","b":"GATCGTGCCGCACGTCATTCGTAGACTGCTCTTGCCATGTG","source_sequence":"GATCGTGACCGCACGTCATTCGTAGACTGCTCTTGCCATGTG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACAGC-TGCAAAAAAAAAAAAAAAAAAATTCGGT","aligned_b":"ACAGCGTGCAAAAAAAAAAAAAAAAAAATTCGGT","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"f481e5ffdf0a34966dc7c0982097d46e4e41a9c85319cf125552a732e6551362","group_id":"6a0612ef9264d5f5411cb6a7f520f49ce6084508021a3c0d469d77434f421d0c","id":"ALIGN-0007476","index":7476,"input":{"a":"ACAGCTGCAAAAAAAAAAAAAAAAAAATTCGGT","b":"ACAGCGTGCAAAAAAAAAAAAAAAAAAATTCGGT","source_sequence":"ACAGCTGCAAAAAAAAAAAAAAAAAAATTCGGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCGCAGTTACNNGAGCGTGCAAAATAG","aligned_b":"TCGCAGTTACTNGAGCGAGC-AAATA-","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"abb361ab92621303495533de617da2f1245e9a2e14f1311e0c90efcc487c2fa4","group_id":"db4b30ed447c7d6551c9868aaa28c7761d1713ce80f0414eeaa06fc2d7b952a7","id":"ALIGN-0007483","index":7483,"input":{"a":"TCGCAGTTACNNGAGCGTGCAAAATAG","b":"TCGCAGTTACTNGAGCGAGCAAATA","source_sequence":"TCGCAGTTACNNGAGCGTGCAAAATAG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGCTTTTACGGGGGGGGGGGGGGGAT-TATCCAGT","aligned_b":"CAGCTTTTAC-GGGGGGGGGGTGGGATGGAT-CAGT","edit_distance":5,"within_threshold":false},"family":"homopolymer","fingerprint":"8abda521d624b50f6760c73d1c2fe95d1632341bdae425b6caa713c2609cbc77","group_id":"4ffd3815db8c623fbca4419083876820d6e82bf05be572dc6c0035c94b83f6e4","id":"ALIGN-0007500","index":7500,"input":{"a":"CAGCTTTTACGGGGGGGGGGGGGGGATTATCCAGT","b":"CAGCTTTTACGGGGGGGGGGTGGGATGGATCAGT","source_sequence":"CAGCTTTTACGGGGGGGGGGGGGGGATTATCCAGT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACGCCACGGTTCACGAATGGCCGCAAGGCATTAA--GGAGCTTG","aligned_b":"CAAG-CTC-CTTAATGCCTTGCGGCCATTCGTGAACCGTGGCGTT","edit_distance":23,"within_threshold":false},"family":"reverse_complement","fingerprint":"1ec7a04d1aad9a8acd8b61c4459bff62986d6b386d306a9d09e2d912fa60aa18","group_id":"cd2ef50dcac4315d69828605a88bbf24384a320959413c904cafa6aa124dc717","id":"ALIGN-0007509","index":7509,"input":{"a":"AACGCCACGGTTCACGAATGGCCGCAAGGCATTAAGGAGCTTG","b":"CAAGCTCCTTAATGCCTTGCGGCCATTCGTGAACCGTGGCGTT","source_sequence":"AACGCCACGGTTCACGAATGGCCGCAAGGCATTAAGGAGCTTG","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"T-ATAGAGCTTAGTAAGTCACATATTAATGTCCCGTGCGG","aligned_b":"TGATAGAGCTTAGTAAGTCACAAATTAATGTCCCGTGCGG","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"1d820d5f070dbf153ae647bfdb0e8aaa33667be6d2f7a434e9789dc8e1768424","group_id":"bdd33367d4e9ca0d57f2759c8160881e691d43bca0d275b4505884a61fade53d","id":"ALIGN-0007522","index":7522,"input":{"a":"TATAGAGCTTAGTAAGTCACATATTAATGTCCCGTGCGG","b":"TGATAGAGCTTAGTAAGTCACAAATTAATGTCCCGTGCGG","source_sequence":"TATAGAGCTTAGTAAGTCACATATTAATGTCCCGTGCGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATTGATGGANNGCAT-CACCGAGAATATCTC","aligned_b":"CATTGATGGANNGCATCCANCGTGAATATCTC","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"309a8362fbcd6ffb0c853962551af94b0c977c66cd1c46b22b4834350c3b6901","group_id":"88199bfd07211522c2eb758da34a2950e21809567dfc2a372833fa057e95acd6","id":"ALIGN-0007528","index":7528,"input":{"a":"CATTGATGGANNGCATCACCGAGAATATCTC","b":"CATTGATGGANNGCATCCANCGTGAATATCTC","source_sequence":"CATTGATGGANNGCATCACCGAGAATATCTC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAACACAACCNNTAGGTATATTTCAGCG","aligned_b":"AAACACAACCNNTAGGTATATTTCAGC-","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"0a5b69462c7e97dfc801d59ae9de0bce0edcab861783264c2591176d0b218f56","group_id":"9dadc0c50afbcbb8acc5d2b936ceff09740d181d246ef38d7979542670247784","id":"ALIGN-0007573","index":7573,"input":{"a":"AAACACAACCNNTAGGTATATTTCAGCG","b":"AAACACAACCNNTAGGTATATTTCAGC","source_sequence":"AAACACAACCNNTAGGTATATTTCAGCG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGGGCAAAAGGATAGACTCGATTCCCA-GTTGTC","aligned_b":"GGGGCAAAAGGATAGACT-GATTCCCACGTTG-C","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"d8b650bd188d94820a2d4b26e9e09244b3b68d2c269972afb8e9a477b00f2c75","group_id":"df978af7ff3b6ed472d79d7bf46425e818ac22477e80113a3c1a462ad374a57b","id":"ALIGN-0007617","index":7617,"input":{"a":"GGGGCAAAAGGATAGACTCGATTCCCAGTTGTC","b":"GGGGCAAAAGGATAGACTGATTCCCACGTTGC","source_sequence":"GGGGCAAAAGGATAGACTCGATTCCCAGTTGTC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAGGCTAAAGTGCTCACGCAG-GT-TGTACTTTA-TCTA","aligned_b":"TA-GATAAAGTAC-AAC-CTGCGTGAGCACTTTAGCCTC","edit_distance":15,"within_threshold":true},"family":"reverse_complement","fingerprint":"ce1099db18eb2260896f73dd32e558fbc4a4d9cb62c23cc406d4e52a5968121b","group_id":"666e635397aeb005193327eef3906bfa1441f02f1555fa0d987a863ab9721817","id":"ALIGN-0007624","index":7624,"input":{"a":"GAGGCTAAAGTGCTCACGCAGGTTGTACTTTATCTA","b":"TAGATAAAGTACAACCTGCGTGAGCACTTTAGCCTC","source_sequence":"GAGGCTAAAGTGCTCACGCAGGTTGTACTTTATCTA","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTCATATCTGTCATAAACCTGTGTGACAAGTAC-ATAGATGTAACA","aligned_b":"T-TCATATCTGTC-TAAACCTGTGTGACAAGTACAATAGATGT-ACA","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"819366916bce1daea767a0d11aaa67b4947b2245ee22bd115fe89dd47943ef5b","group_id":"4293c9ff34fb83c5dee291bf7ef1519ba0351c1452cf2a1aace266d58968591e","id":"ALIGN-0007637","index":7637,"input":{"a":"TGTCATATCTGTCATAAACCTGTGTGACAAGTACATAGATGTAACA","b":"TTCATATCTGTCTAAACCTGTGTGACAAGTACAATAGATGTACA","source_sequence":"TGTCATATCTGTCATAAACCTGTGTGACAAGTACATAGATGTAACA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-C-AC-C-TGAAATGGAAAACTGCACGAGTTGC","aligned_b":"GCAACTCGTGCAGTTTTCCATTTCA-G-G-TG-","edit_distance":17,"within_threshold":false},"family":"reverse_complement","fingerprint":"c2170e8d77221c4cd2f144b58edc18aa4a87cb7b5cf69bf7746274f6c845a937","group_id":"c65522e37c0b9c31158b74163b8a64e5621380c269462e0e5a1f1264a9a25b6c","id":"ALIGN-0007649","index":7649,"input":{"a":"CACCTGAAATGGAAAACTGCACGAGTTGC","b":"GCAACTCGTGCAGTTTTCCATTTCAGGTG","source_sequence":"CACCTGAAATGGAAAACTGCACGAGTTGC","threshold":16},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGTAGGTGCACTCAGTACT-CAGTGTACCAGTGACCCA","aligned_b":"AGGTAGGTGCACTCTGTACTCCAGTGTATCAGT-ACCCA","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"672cca052af25ccb6e3b9ee4182a3af969fa7bee497bdbfcebdc173610eff898","group_id":"ec93a46bbccfc13db236ac888e260bb1bf24123b087960ea7257f8d00610a6a1","id":"ALIGN-0007657","index":7657,"input":{"a":"AGGTAGGTGCACTCAGTACTCAGTGTACCAGTGACCCA","b":"AGGTAGGTGCACTCTGTACTCCAGTGTATCAGTACCCA","source_sequence":"AGGTAGGTGCACTCAGTACTCAGTGTACCAGTGACCCA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTTGTCCGTAGGGGGGGGGGGGGCACTTTGTTG","aligned_b":"TTTGTCCGTAGGGGGGGGGGGGGCACTTTGTTG","edit_distance":0,"within_threshold":true},"family":"homopolymer","fingerprint":"b5a72fd59e39fa2737dad94a49eaa49c129b6688c81eabc7e9f775d59b73a842","group_id":"482d886fa09e80b250243b56429868c929ac692252bc5932fc1107016c1a648d","id":"ALIGN-0007665","index":7665,"input":{"a":"TTTGTCCGTAGGGGGGGGGGGGGCACTTTGTTG","b":"TTTGTCCGTAGGGGGGGGGGGGGCACTTTGTTG","source_sequence":"TTTGTCCGTAGGGGGGGGGGGGGCACTTTGTTG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAGAACAGAT-TGTGCTTACATAT-TGAT-GG","aligned_b":"-CCATCA-ATATGTAAGCACA-ATCTGTTCTA","edit_distance":16,"within_threshold":false},"family":"reverse_complement","fingerprint":"f3ecef131af7551246d24b9b5de531bdd2d227a27c4515e129766f7d6eb3eb05","group_id":"12958c39445ee046413a2227f90794bdfdd053b543db301f23a4f11bd0ee780a","id":"ALIGN-0007684","index":7684,"input":{"a":"TAGAACAGATTGTGCTTACATATTGATGG","b":"CCATCAATATGTAAGCACAATCTGTTCTA","source_sequence":"TAGAACAGATTGTGCTTACATATTGATGG","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGAGCAACCGGGGGGGGGTCTGC-ACCAC","aligned_b":"AGAGCATCC-GGGGGGCGTCTGCAACCAC","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"02287bbd021de46aabdb00c116ec0271e96780b2b748eba7bc54edd4b44cae05","group_id":"9d33811b3c733b11b1ac630dc6305eccceb7fd63bca8cb6c5854e6f6bea557e7","id":"ALIGN-0007685","index":7685,"input":{"a":"AGAGCAACCGGGGGGGGGTCTGCACCAC","b":"AGAGCATCCGGGGGGCGTCTGCAACCAC","source_sequence":"AGAGCAACCGGGGGGGGGTCTGCACCAC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACCTACACGGNNAGCACATTGCTTTGGCCGTCC","aligned_b":"ACCTTCACGGNNAGCACA-TGCTTTGGCCGTCC","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"214662bd86177490cc088117eef60dfc49f1fc15a2e342007091caa1da31858d","group_id":"2dde3eaf3e211b0f546917f17c664aebd1db7cc1c0bc88b1cd92acb35d2bb09d","id":"ALIGN-0007688","index":7688,"input":{"a":"ACCTACACGGNNAGCACATTGCTTTGGCCGTCC","b":"ACCTTCACGGNNAGCACATGCTTTGGCCGTCC","source_sequence":"ACCTACACGGNNAGCACATTGCTTTGGCCGTCC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCATTGGACGAAAAAAAAAAAAAGATATGCCGC","aligned_b":"GCATTGGACGAAAAAAAAAAAAAGAGA--CCGC","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"1e54dc815f8220621f67fa1114111a83ed4d3aae79410ed91543a9b5664220db","group_id":"dcb076cdfdc66d852af4af9303ef46b7ff37d75496d9c0fc795293d126dc6a75","id":"ALIGN-0007695","index":7695,"input":{"a":"GCATTGGACGAAAAAAAAAAAAAGATATGCCGC","b":"GCATTGGACGAAAAAAAAAAAAAGAGACCGC","source_sequence":"GCATTGGACGAAAAAAAAAAAAAGATATGCCGC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCTGCCATCACCCC-CCCCCCCCCCCCGACTGATT","aligned_b":"GCTGCCATCACCCCGCCCCTCCCCCCCGACTGATT","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"02fb6b4135ade965c911c3a07ad17218339994c32792359a49d3459344e65f7a","group_id":"bf951c7993068e1c6ccd3443e4c1cd7f67ea7c79191890e711ef3f368f22ac91","id":"ALIGN-0007705","index":7705,"input":{"a":"GCTGCCATCACCCCCCCCCCCCCCCCGACTGATT","b":"GCTGCCATCACCCCGCCCCTCCCCCCCGACTGATT","source_sequence":"GCTGCCATCACCCCCCCCCCCCCCCCGACTGATT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--ATG-AC-GAATAGGGATGGAACACCGGAACTTGAGTATTTAGTACTTTC","aligned_b":"GAAAGTACTAAATACTCAAGTTCCGGTGTTCCATCCCTA-TTCGT-C-AT-","edit_distance":29,"within_threshold":true},"family":"reverse_complement","fingerprint":"8465b12f25eec154a6599aa6c4a0cabb6c0fd5757162c5ef60c2f224c1de8244","group_id":"e36c23bde0f1bd7bebbaaf8cc356d824fab9835bff2fe2d96c79ebc2d5d8302a","id":"ALIGN-0007709","index":7709,"input":{"a":"ATGACGAATAGGGATGGAACACCGGAACTTGAGTATTTAGTACTTTC","b":"GAAAGTACTAAATACTCAAGTTCCGGTGTTCCATCCCTATTCGTCAT","source_sequence":"ATGACGAATAGGGATGGAACACCGGAACTTGAGTATTTAGTACTTTC","threshold":30},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGCGAACCTG-CCCCCCCCCCCGCCACGGGAG","aligned_b":"CGCGAACCTGCCCCCCCCCCCCGCCACGGGAG","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"3343c64c9445f24c22a8c8c2d896ac3ba4d6f84a142d392e37ded0e0774b16d3","group_id":"e31fba37399cf45c755dadbae92900b12583bfcbc2116a88ff8291b2bad35d54","id":"ALIGN-0007710","index":7710,"input":{"a":"CGCGAACCTGCCCCCCCCCCCGCCACGGGAG","b":"CGCGAACCTGCCCCCCCCCCCCGCCACGGGAG","source_sequence":"CGCGAACCTGCCCCCCCCCCCGCCACGGGAG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGAGCAGTTGGGGGGGGGGGGGGGGGGGGGGGCAATGAC","aligned_b":"CGAGCAGTT-GGGGGAGGGGGAGGGGGGGGGGCAATGAC","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"938782d1a604cfe36d00a17ba4c78c6c4a15fbbf7181758f9fe38df7f07fa09c","group_id":"7137e93f8cce1360a265803f6fcca54a45a332c3c1c26ab16526cca5367f110e","id":"ALIGN-0007711","index":7711,"input":{"a":"CGAGCAGTTGGGGGGGGGGGGGGGGGGGGGGGCAATGAC","b":"CGAGCAGTTGGGGGAGGGGGAGGGGGGGGGGCAATGAC","source_sequence":"CGAGCAGTTGGGGGGGGGGGGGGGGGGGGGGGCAATGAC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCTCCACAACNNGATTAT-CCGCCT-TG","aligned_b":"GCTCCACAACNNGATTATCCCGCCTATG","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"0e6f834236a985e51d5446736eac2c9c20221265de773e7f349f1c2f0f1d298e","group_id":"c2efa673202b0dd2e10ebb0c333a0e0c85b6e20ad6a0dc7bc973089decd481e8","id":"ALIGN-0007713","index":7713,"input":{"a":"GCTCCACAACNNGATTATCCGCCTTG","b":"GCTCCACAACNNGATTATCCCGCCTATG","source_sequence":"GCTCCACAACNNGATTATCCGCCTTG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TATACGACGGTTTTTTTTTTGGCTTAGTG","aligned_b":"TATACGACGGTTTTTTTTTTGGCTTAGT-","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"46837ace4ceb774da7eebbf83dcf4547c322b46058900880a2f1d391e0b2567b","group_id":"fce29cff0b907a14b812db620d0dfd424997792aa54d67d3115a8779740ce68b","id":"ALIGN-0007720","index":7720,"input":{"a":"TATACGACGGTTTTTTTTTTGGCTTAGTG","b":"TATACGACGGTTTTTTTTTTGGCTTAGT","source_sequence":"TATACGACGGTTTTTTTTTTGGCTTAGTG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGATTCATTCTTC-TTTTACATGTGGTTCACTAGCACTGCGTCGGGTG-AT-G","aligned_b":"C-A-TCACCCGACGCAGTGCTAGTGAACCACATGTA-AAAGAAGAATGAATCG","edit_distance":29,"within_threshold":true},"family":"reverse_complement","fingerprint":"4fdaac1867068bb1c3f413f11538d18ac6fe35e52954ba3554d87a6bebe60944","group_id":"5b83e55d2a758254cd8e8ff4879df2165f4a8e1c838c1d02b4d83694e1f5bcd5","id":"ALIGN-0007729","index":7729,"input":{"a":"CGATTCATTCTTCTTTTACATGTGGTTCACTAGCACTGCGTCGGGTGATG","b":"CATCACCCGACGCAGTGCTAGTGAACCACATGTAAAAGAAGAATGAATCG","source_sequence":"CGATTCATTCTTCTTTTACATGTGGTTCACTAGCACTGCGTCGGGTGATG","threshold":30},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTACCCTTGCACG-GCTTTGTATAGCGCTCGGGGTACCTAAAA","aligned_b":"TTTTAGGTACCCCGAGCGCTATACAAAGC-CGTGCAAGGGTAAC","edit_distance":24,"within_threshold":true},"family":"reverse_complement","fingerprint":"6e80a058ccdf347acb3e841e532d307885b3c2cdacf77102217e9704d1242eaf","group_id":"ee82f01572750f1a764adcf2f5f775a0ef82aeabb874e08f8c4d30f392125c86","id":"ALIGN-0007739","index":7739,"input":{"a":"GTTACCCTTGCACGGCTTTGTATAGCGCTCGGGGTACCTAAAA","b":"TTTTAGGTACCCCGAGCGCTATACAAAGCCGTGCAAGGGTAAC","source_sequence":"GTTACCCTTGCACGGCTTTGTATAGCGCTCGGGGTACCTAAAA","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCCCGTCCGCATGCAAGAAGCTAACATAA-GTC","aligned_b":"T-CCGTCCGCATGCAAGAAGCTAACATAACGTC","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"58aed67cfbd9f0c9aef4aa2c0e659ef1c28223439fd9be202efe31893bb2d4b0","group_id":"6c0d6f7f11845b1f0c67251f3267af86d29a10190370c06b0b2185145da84a29","id":"ALIGN-0007752","index":7752,"input":{"a":"TCCCGTCCGCATGCAAGAAGCTAACATAAGTC","b":"TCCGTCCGCATGCAAGAAGCTAACATAACGTC","source_sequence":"TCCCGTCCGCATGCAAGAAGCTAACATAAGTC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAGACGCATCNNTGCGTGCCAAGATT","aligned_b":"GAGACGCA-CNNTGCGTGCCAAGATT","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"1835282504866cea097d707f63d64aa04e8f0c97a967bd17e7f79fbf625d78a2","group_id":"f81812e55b5140f1d1251d5288056fe4673e9e4b6f00a0dd00d2e98a2280dfc7","id":"ALIGN-0007753","index":7753,"input":{"a":"GAGACGCATCNNTGCGTGCCAAGATT","b":"GAGACGCACNNTGCGTGCCAAGATT","source_sequence":"GAGACGCATCNNTGCGTGCCAAGATT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CCGCAGGAACGGCAGAACCGTCCTTGGAGTGTATATG","aligned_b":"CCGCAGGAACGGCAGAACCGT-CTTGGAGTGTATATG","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"9803626cd379d94096e07c5aa2368219bca4d5f300070bee9e71e9325408e414","group_id":"4239c577350e5bfe8638968fe381ef49f593c2f6224a2ff887b0d87db50c5c15","id":"ALIGN-0007932","index":7932,"input":{"a":"CCGCAGGAACGGCAGAACCGTCCTTGGAGTGTATATG","b":"CCGCAGGAACGGCAGAACCGTCTTGGAGTGTATATG","source_sequence":"CCGCAGGAACGGCAGAACCGTCCTTGGAGTGTATATG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGTTGCCAGTATGGT-ACAAGTGGTTATCTTTCGAAGATGC","aligned_b":"GCATCTTCGAAAGATAACCACTTG-TACCATACTGGCAACC","edit_distance":23,"within_threshold":true},"family":"reverse_complement","fingerprint":"63a851353c038c06c4d4ba6e803930697c569e2e2f1386e8602b125848e3a251","group_id":"a300e93fd8038058163dc5d72eb9bd9fdafd99f8dee24ea956078e090202ce02","id":"ALIGN-0007934","index":7934,"input":{"a":"GGTTGCCAGTATGGTACAAGTGGTTATCTTTCGAAGATGC","b":"GCATCTTCGAAAGATAACCACTTGTACCATACTGGCAACC","source_sequence":"GGTTGCCAGTATGGTACAAGTGGTTATCTTTCGAAGATGC","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATGTGCGTTCCCCCCCCCCCCCCCCCCCCCTTTTTCATG","aligned_b":"ATGTGCG-TCCCCCCCCCCCCCCCCCCCCCTTTTTCATG","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"0566b5811c45320de586773bd44f3c1fa37a1bf9aba3699ad1b632e73ec19c25","group_id":"44bf33d1812645b0360dbee5aee4598ed70dd63150f2e346d9041ddfb4014460","id":"ALIGN-0007941","index":7941,"input":{"a":"ATGTGCGTTCCCCCCCCCCCCCCCCCCCCCTTTTTCATG","b":"ATGTGCGTCCCCCCCCCCCCCCCCCCCCCTTTTTCATG","source_sequence":"ATGTGCGTTCCCCCCCCCCCCCCCCCCCCCTTTTTCATG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTA-AGGATGGTGGGCGTTAGCTTCGGCCGGACCAGAAAATCAC","aligned_b":"TTATAGGATGGTGGGCGTTAGGTTCGGCCGGACCAG-AAATCAC","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"dc587a813f8d98d93f162d2171a623a9c34e3f04d6049c49529063ecded39b6f","group_id":"70d82bcb4eb51b0a3f232c3b696b24a00a4327b25814fc0c24a6044c8d2d8a27","id":"ALIGN-0007947","index":7947,"input":{"a":"TTAAGGATGGTGGGCGTTAGCTTCGGCCGGACCAGAAAATCAC","b":"TTATAGGATGGTGGGCGTTAGGTTCGGCCGGACCAGAAATCAC","source_sequence":"TTAAGGATGGTGGGCGTTAGCTTCGGCCGGACCAGAAAATCAC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GGCGTAGTTCCCCCCCCCCCCCATGCCTAAGA","aligned_b":"TGGCGTAGTTCCCCCCACCCCCCATGCCGAAGC","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"8e4ffb05039f7d22e9faddd3866d1826f82e6e0b637b07e769986028535242d5","group_id":"51dc3f2dbb2004961e7febc9feebba4b4209d2f2ef1e521de3b693b3a5a82aa7","id":"ALIGN-0007950","index":7950,"input":{"a":"GGCGTAGTTCCCCCCCCCCCCCATGCCTAAGA","b":"TGGCGTAGTTCCCCCCACCCCCCATGCCGAAGC","source_sequence":"GGCGTAGTTCCCCCCCCCCCCCATGCCTAAGA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGACTACGCGTCGGGTC-GTGTTCTGCTGCTGTAGTTATTGGCATT","aligned_b":"ACGACTACGCGTCGGGTCGGTGTTCTGCT-C-GTAGTTATTGGCATT","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"13be9a8fa28aa1c1f46842ea488488a1e4bd969185d525235d5b7b4ed02e3051","group_id":"5f7b23d33eec89c781ae1cbc6528aa42ff5d460ad80e6cb5dc3405d5a7322d94","id":"ALIGN-0007952","index":7952,"input":{"a":"ACGACTACGCGTCGGGTCGTGTTCTGCTGCTGTAGTTATTGGCATT","b":"ACGACTACGCGTCGGGTCGGTGTTCTGCTCGTAGTTATTGGCATT","source_sequence":"ACGACTACGCGTCGGGTCGTGTTCTGCTGCTGTAGTTATTGGCATT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--CGTACA--C--CTTTTGATAAGCCGAATCTACGCC","aligned_b":"GGCGTAGATTCGGCTTATCAAAAG--G--TGTACG--","edit_distance":17,"within_threshold":false},"family":"reverse_complement","fingerprint":"609d0cbcabc3ad55e3e2fa2032b99adb6f3fb4ed873b5d7045e30dd8e2a822c2","group_id":"b0f65c0fc9a59b7664d2f769786062d4c3a696d652cc91cd890c30b07e337e74","id":"ALIGN-0007984","index":7984,"input":{"a":"CGTACACCTTTTGATAAGCCGAATCTACGCC","b":"GGCGTAGATTCGGCTTATCAAAAGGTGTACG","source_sequence":"CGTACACCTTTTGATAAGCCGAATCTACGCC","threshold":16},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"G-TATAGGTACGTCGTCGTGCTGCGCCG","aligned_b":"GATATAGGTA--TCGTCGTGCAGCGCCG","edit_distance":4,"within_threshold":false},"family":"tandem_repeat","fingerprint":"9ee445dfd9be84d291a9e9bd37520e3dd9da82e96f34446311f166b1b3bb8999","group_id":"6d0e01b99aa4f189f2e76f66695fc4ef36c915b9a337960d53f4a675744e6fa5","id":"ALIGN-0007986","index":7986,"input":{"a":"GTATAGGTACGTCGTCGTGCTGCGCCG","b":"GATATAGGTATCGTCGTGCAGCGCCG","source_sequence":"GTATAGGTACGTCGTCGTGCTGCGCCG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GACTAATTCAGGCTGGGCCGGGCTAGCCA","aligned_b":"GACTAATGTAGGCAGGGCCGGGCTAGCCA","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"58bf8913b2b8198262c51137e2727617ae04ec7f886d01aa92f823cb738015d8","group_id":"f3095a57c9d95dedea75cce01b73e46bd01a549623e409f335186567675395f0","id":"ALIGN-0008002","index":8002,"input":{"a":"GACTAATTCAGGCTGGGCCGGGCTAGCCA","b":"GACTAATGTAGGCAGGGCCGGGCTAGCCA","source_sequence":"GACTAATTCAGGCTGGGCCGGGCTAGCCA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGATATGACGTCGTGGTGGCACTCAATGATGGTGTCCCACCATGT","aligned_b":"CGATATG-CGTCGTGGTGGCA-TCAATGATGGTGTCCCACCA-GT","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"787705f663944b92190d678de4bfada3f6802702f9554392714cdc491a356754","group_id":"504ee3b3f806a364d148a60c687f4a7542ccdfe87ff989be66b6797a3606f920","id":"ALIGN-0008027","index":8027,"input":{"a":"CGATATGACGTCGTGGTGGCACTCAATGATGGTGTCCCACCATGT","b":"CGATATGCGTCGTGGTGGCATCAATGATGGTGTCCCACCAGT","source_sequence":"CGATATGACGTCGTGGTGGCACTCAATGATGGTGTCCCACCATGT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCTCCATCGTAATAATAATAATAATAATAAAGACGTCGG","aligned_b":"GCTCCATCGTATTAATAATATTAATAA-AAAGACGTCGG","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"ebc9c01ba26f1a299be94c81e0295a4f187ba7ae76047a8fec462779b30f06cb","group_id":"00ce61f185b761e0ac86a4a8626cdef80571940f08e665669db4c5b9864c449e","id":"ALIGN-0008036","index":8036,"input":{"a":"GCTCCATCGTAATAATAATAATAATAATAAAGACGTCGG","b":"GCTCCATCGTATTAATAATATTAATAAAAAGACGTCGG","source_sequence":"GCTCCATCGTAATAATAATAATAATAATAAAGACGTCGG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-AGCTATGTAT--TCTTCTTCGGGGTTGCC","aligned_b":"AAGCTATGTATCATCTTCTTCGGGGTGGCC","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"6f9e78724e2329a0097596cae13812e18443aecf03833edb0bc3bd8b73d7ba31","group_id":"5d3d3dd1221475a7675626947d9998653698b9ac8bfa8eae76655cee8bb84c81","id":"ALIGN-0008041","index":8041,"input":{"a":"AGCTATGTATTCTTCTTCGGGGTTGCC","b":"AAGCTATGTATCATCTTCTTCGGGGTGGCC","source_sequence":"AGCTATGTATTCTTCTTCGGGGTTGCC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGTTTGCTGTTTGCTACTCAACCTATCCC-TT","aligned_b":"ACGTTTGCGGTTCGCTACTCAACCTATCCCTTT","edit_distance":3,"within_threshold":false},"family":"clustered_indels","fingerprint":"1baae23364f5651f69f27eca022ab4daccd82bf527f5fe8b2f0e473bbcb31605","group_id":"3e603e1d30bce2d66a20a3cf09e04916ad52b960a0e91e1c9e399afbc0563df2","id":"ALIGN-0008042","index":8042,"input":{"a":"ACGTTTGCTGTTTGCTACTCAACCTATCCCTT","b":"ACGTTTGCGGTTCGCTACTCAACCTATCCCTTT","source_sequence":"ACGTTTGCTGTTTGCTACTCAACCTATCCCTT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAGAAAATGACGACGACGACGACGAC-GACGAG--AACAGGA","aligned_b":"TAGAAAATGACGACGACGACGAC-ACGGACGAGAAAACAGGA","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"56afb600c70145368adda417655b58fe1db70e550515b9c299328bb1a2bd8414","group_id":"494cdc05c55739a5e3f61ffb71204e0723946069adaeb2e2f7d73234e86e61d7","id":"ALIGN-0008046","index":8046,"input":{"a":"TAGAAAATGACGACGACGACGACGACGACGAGAACAGGA","b":"TAGAAAATGACGACGACGACGACACGGACGAGAAAACAGGA","source_sequence":"TAGAAAATGACGACGACGACGACGACGACGAGAACAGGA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCCCTATGCNNGCCCAGCCCTCTATCAGAGGGTGCAGCCTGG","aligned_b":"AGCCCTATGCNNGCCCAGCCCTCTATCAGAGGGTGCAGCCTNG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"6776df1cdec54a20940db64d79e63cd42b60327cd1a34f0f0953eb56fd4e4485","group_id":"06bee329367b1f030256bd0ecec82356e365f381947a5a03a57fac3efc049de5","id":"ALIGN-0008058","index":8058,"input":{"a":"AGCCCTATGCNNGCCCAGCCCTCTATCAGAGGGTGCAGCCTGG","b":"AGCCCTATGCNNGCCCAGCCCTCTATCAGAGGGTGCAGCCTNG","source_sequence":"AGCCCTATGCNNGCCCAGCCCTCTATCAGAGGGTGCAGCCTGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTGGTGTGGTTTTTTTTCTTCTAGTCC","aligned_b":"TCTGTTGTGG-TTTTTTTCTTCTAGTCC","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"8c93a3aeaff31aa7b78c553b06e2e8de63949d265e6a98e2c0835853ef5cb097","group_id":"e7d7e8517ffe6b710ec145d9eaecac9c1fccffb01849e7814a5996be0d12f535","id":"ALIGN-0008060","index":8060,"input":{"a":"TCTGGTGTGGTTTTTTTTCTTCTAGTCC","b":"TCTGTTGTGGTTTTTTTCTTCTAGTCC","source_sequence":"TCTGGTGTGGTTTTTTTTCTTCTAGTCC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCAACTCGTGGTGGTGGTGGTGGTGGTGGTCCTAGAGAG","aligned_b":"CCAACTCGTGGGGGTGGTGGTGGTGGTGGTCCTAGAGAG","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"a4192105b0c1e437aa6f34511348dcb2c8b085231301044e5984015cbe93b682","group_id":"6c04229988e9eef3c9f6bc6207b947658f0cc879d02706cdab91fbebb05160ac","id":"ALIGN-0008076","index":8076,"input":{"a":"CCAACTCGTGGTGGTGGTGGTGGTGGTGGTCCTAGAGAG","b":"CCAACTCGTGGGGGTGGTGGTGGTGGTGGTCCTAGAGAG","source_sequence":"CCAACTCGTGGTGGTGGTGGTGGTGGTGGTCCTAGAGAG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACCCCTCGGCCCCCCCCCCCCCCCCC-GC-TCGA-TTG","aligned_b":"ACGCCTCGGCCCCCCCCCCCCCCCCCTGCGTCGATTTG","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"3d13c36c199eb231125eca2e3ef0a69ebdcb8a555d48512fd648638df81798a4","group_id":"52fa01f126ac14ca541164a302df055c3f26500effc4e6f6c709a85cb9bec095","id":"ALIGN-0008090","index":8090,"input":{"a":"ACCCCTCGGCCCCCCCCCCCCCCCCCGCTCGATTG","b":"ACGCCTCGGCCCCCCCCCCCCCCCCCTGCGTCGATTTG","source_sequence":"ACCCCTCGGCCCCCCCCCCCCCCCCCGCTCGATTG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCAAGCCCGATTCAGCCGCATAGGGG-CCGA","aligned_b":"TTC-AGCCCGATTCAGCCGCATAGGGGCCCGA","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"38d985018661fa1bd3a557e82822a3dfc5c918e9b5f6b88d950348759bdb013c","group_id":"d802934f38eedb3edd1cca640f7b22588adff0e1cb4ef9a64dbd6c1312ba4014","id":"ALIGN-0008092","index":8092,"input":{"a":"TTCAAGCCCGATTCAGCCGCATAGGGGCCGA","b":"TTCAGCCCGATTCAGCCGCATAGGGGCCCGA","source_sequence":"TTCAAGCCCGATTCAGCCGCATAGGGGCCGA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CCGGCCGGTGAAATCTGCAGA--GGAGCATTC-A","aligned_b":"-TGAATGCT--CCTCTGCAGATTTCACCGGCCGG","edit_distance":20,"within_threshold":true},"family":"reverse_complement","fingerprint":"9ac85e233e0fcee7a20bda3f46c1715676b30f489830d110d0615631e1ffbcd8","group_id":"801daf07018ee0dac0bc16dfd0ff56a8c2dfde30e5a79955d00ef5450be598e1","id":"ALIGN-0008139","index":8139,"input":{"a":"CCGGCCGGTGAAATCTGCAGAGGAGCATTCA","b":"TGAATGCTCCTCTGCAGATTTCACCGGCCGG","source_sequence":"CCGGCCGGTGAAATCTGCAGAGGAGCATTCA","threshold":20},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-CTGCATCCTGCTGCTGCTCAGTAGTGC","aligned_b":"CCTGAAT-CTGCTGCTGCTCAGTAGTGC","edit_distance":3,"within_threshold":false},"family":"tandem_repeat","fingerprint":"31e6192398872d466872aa332d02242441abd8bf0de9f64f6045a0ba0fc23a87","group_id":"b5db80c9be04c72a43b4f546cba3c1105c7896ede9055213062cf2946d922c38","id":"ALIGN-0008141","index":8141,"input":{"a":"CTGCATCCTGCTGCTGCTCAGTAGTGC","b":"CCTGAATCTGCTGCTGCTCAGTAGTGC","source_sequence":"CTGCATCCTGCTGCTGCTCAGTAGTGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGGTGGACTAGCAGCAGCAGCAGCAGCAAGTCGGGT","aligned_b":"TGGTGGACTAGCAGCAGCAGCAGCAGCAAGTCGGGT","edit_distance":0,"within_threshold":true},"family":"tandem_repeat","fingerprint":"f925dc22f4335c394b276945f7f3738dc81420554f198fa8df4515c77a14fd22","group_id":"0a7c608bfb626f6ccb5c0ec77a62ea293474d5389e19b600726dea06f93b8189","id":"ALIGN-0008146","index":8146,"input":{"a":"TGGTGGACTAGCAGCAGCAGCAGCAGCAAGTCGGGT","b":"TGGTGGACTAGCAGCAGCAGCAGCAGCAAGTCGGGT","source_sequence":"TGGTGGACTAGCAGCAGCAGCAGCAGCAAGTCGGGT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCCTGGCGCTNNAGTTA-CCGGAGGGTCTCAC","aligned_b":"GCCTGGCGCTNNAGTTATCCGGAGGGTCTCAC","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"a5d38481485813d5041c214af7edfb020d044cd12284ec549c9a1b4904ee7852","group_id":"c9f48b410179274b912696f26beffdc06743cb2597f5f93aa9576721fb895480","id":"ALIGN-0008153","index":8153,"input":{"a":"GCCTGGCGCTNNAGTTACCGGAGGGTCTCAC","b":"GCCTGGCGCTNNAGTTATCCGGAGGGTCTCAC","source_sequence":"GCCTGGCGCTNNAGTTACCGGAGGGTCTCAC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACCTG-AA-CCCTACCACGCATTTCATGA","aligned_b":"TCATGAAATGCGTGGTA-G-GGTTCAGGT","edit_distance":15,"within_threshold":false},"family":"reverse_complement","fingerprint":"9aa10da48b3cbc0a25cef37fa842f15bf0faedbc31baed0040798c22bdb971d5","group_id":"fe062291d2ac1839edc27423138e6681917457e788ae58d6db3fd913138e7377","id":"ALIGN-0008154","index":8154,"input":{"a":"ACCTGAACCCTACCACGCATTTCATGA","b":"TCATGAAATGCGTGGTAGGGTTCAGGT","source_sequence":"ACCTGAACCCTACCACGCATTTCATGA","threshold":14},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTGCTTCGTACGTAATCGAACAGAAG-ATGAAGGCCA","aligned_b":"TTGCTTCGTACGTAATCGAACAGAAGAATGAAGGCCA","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"71e3e035fd5a8d391486b8c557f6ce7aa2e3bd170dacae1a58a6e089f197ca04","group_id":"018787fdd3d5ecc6a61a3c8f1d1552f7172c8385f7a37674ed9232b0a17e25d1","id":"ALIGN-0008162","index":8162,"input":{"a":"TTGCTTCGTACGTAATCGAACAGAAGATGAAGGCCA","b":"TTGCTTCGTACGTAATCGAACAGAAGAATGAAGGCCA","source_sequence":"TTGCTTCGTACGTAATCGAACAGAAGATGAAGGCCA","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTGTGTAAAACAACAACAACAA-CAACAACGCGCGGGAC","aligned_b":"CGTGTGTAAAACAACAACAACAACCAACAACGCGCGGGAC","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"65862c8b59877bb8358794949d677e28a1b2d0f905f9ace6ed23cee924b1b5a9","group_id":"a1f42d132fda6b02cf043d54278d5788bcf2dda9d95b6ac8da2be9287355645f","id":"ALIGN-0008166","index":8166,"input":{"a":"CGTGTGTAAAACAACAACAACAACAACAACGCGCGGGAC","b":"CGTGTGTAAAACAACAACAACAACCAACAACGCGCGGGAC","source_sequence":"CGTGTGTAAAACAACAACAACAACAACAACGCGCGGGAC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TACACGGCATNNCGAATAACGGCGAACGCTCGCTA","aligned_b":"-ACACGGCATNNCGAATAACGGCGAACGCTCGCTA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"ab39db2e720f4ead65039f5d8361ee7bbd11c4379ae20157939d975331cd50ea","group_id":"1935d7e7a258994be960774ced995e64fca60d2bfefd70a77877b5613a4534bf","id":"ALIGN-0008173","index":8173,"input":{"a":"TACACGGCATNNCGAATAACGGCGAACGCTCGCTA","b":"ACACGGCATNNCGAATAACGGCGAACGCTCGCTA","source_sequence":"TACACGGCATNNCGAATAACGGCGAACGCTCGCTA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTATACTGAGGAGTCCCACCGATCTTAA-ACCGCAGGG--TAGTCA--ATGA","aligned_b":"TCAT--TGACTA--CCCTGCGGT-TTAAGATCGGTGGGACTCCTCAGTATAA","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"d83e3e093ede7bebb70f03ad1a246b778a90748323ad1c94110395f3b4215cc9","group_id":"42d9bef103c45ca7db38d1c6ecaed5d20886f79dc36048287defdc72ec147169","id":"ALIGN-0008174","index":8174,"input":{"a":"TTATACTGAGGAGTCCCACCGATCTTAAACCGCAGGGTAGTCAATGA","b":"TCATTGACTACCCTGCGGTTTAAGATCGGTGGGACTCCTCAGTATAA","source_sequence":"TTATACTGAGGAGTCCCACCGATCTTAAACCGCAGGGTAGTCAATGA","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"---GGATGATAAACACCAAAATCCAAG","aligned_b":"CTTGGATTTTGGTGTTTATCATCC---","edit_distance":17,"within_threshold":false},"family":"reverse_complement","fingerprint":"aa5a74e01c4ef97f084b050c93b7feda9f13f915369db25566a4ee0ab68729f9","group_id":"1996459b6a2adfaed570c90d9ea43894ccb7a747176bc34890effa61e41a2114","id":"ALIGN-0008179","index":8179,"input":{"a":"GGATGATAAACACCAAAATCCAAG","b":"CTTGGATTTTGGTGTTTATCATCC","source_sequence":"GGATGATAAACACCAAAATCCAAG","threshold":16},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGTAAATAAAT-TTCCCTTCATTTGAGGTCGCCGAAAACTCGTGCCAG","aligned_b":"CAGTAAATAAATGGTCCCTTCATTTGAGGTCGCCG-AAACTCGT-CCAG","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"e2efcab5017876893671415202043715e50f4a602e37f718d9fc1e542fb4ecb6","group_id":"2319b9591726ae81eb9298d3ac9a96b176712ad62faa005edaf1db56424c0049","id":"ALIGN-0008182","index":8182,"input":{"a":"CAGTAAATAAATTTCCCTTCATTTGAGGTCGCCGAAAACTCGTGCCAG","b":"CAGTAAATAAATGGTCCCTTCATTTGAGGTCGCCGAAACTCGTCCAG","source_sequence":"CAGTAAATAAATTTCCCTTCATTTGAGGTCGCCGAAAACTCGTGCCAG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACAAATGACGN-NTTG-CGTCACTAACGTTCAAT-CTAGACCCCCCTC","aligned_b":"ACAAATGACGNANTTGACGTCACTAACGTTCAATACTAGACCCCCCTC","edit_distance":3,"within_threshold":false},"family":"literal_N","fingerprint":"e62a2c56beb9b2312fbf8072eba933597964d0b0a040647c3418a184c0498e8c","group_id":"b0532517d3d7c4fafc7639debd2b09e7e4dfd2d21facf6b1cac1783e77680847","id":"ALIGN-0008188","index":8188,"input":{"a":"ACAAATGACGNNTTGCGTCACTAACGTTCAATCTAGACCCCCCTC","b":"ACAAATGACGNANTTGACGTCACTAACGTTCAATACTAGACCCCCCTC","source_sequence":"ACAAATGACGNNTTGCGTCACTAACGTTCAATCTAGACCCCCCTC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACTTCCGTCTGCTGCTGCTGCTGCC-TCTGACAT","aligned_b":"ACTTCCGTCTGCTGCTGCTGCTCCCATCCGAC-T","edit_distance":4,"within_threshold":false},"family":"tandem_repeat","fingerprint":"0c26fb498434c56a413f9c313a2f8712416ab64f8f5daf5886958417257fe493","group_id":"53d2de59c2c2cb3152faf05d1d12926b9d7d2ddc2b57c502088e8a6da9621bf1","id":"ALIGN-0008201","index":8201,"input":{"a":"ACTTCCGTCTGCTGCTGCTGCTGCCTCTGACAT","b":"ACTTCCGTCTGCTGCTGCTGCTCCCATCCGACT","source_sequence":"ACTTCCGTCTGCTGCTGCTGCTGCCTCTGACAT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTTAGAAATTCTCGGATATGAACATG-GCGGAT-CG-CAACTT-T---","aligned_b":"---A-AAGTT-GC-GATCCG-CCATGTTCATATCCGAGAATTTCTAAG","edit_distance":24,"within_threshold":true},"family":"reverse_complement","fingerprint":"83b9f2a92602b9b896baab44bfd6e6e8da71241064d895b74c7812cf05e95b4f","group_id":"2064f6bf8ec56fc3cf633fc1a140d0610b698d3a86a1aa24f92607c4e2b5466c","id":"ALIGN-0008239","index":8239,"input":{"a":"CTTAGAAATTCTCGGATATGAACATGGCGGATCGCAACTTT","b":"AAAGTTGCGATCCGCCATGTTCATATCCGAGAATTTCTAAG","source_sequence":"CTTAGAAATTCTCGGATATGAACATGGCGGATCGCAACTTT","threshold":25},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TATTAGTATCTTTTTTTTTTTTTTTTCG-GAATTAAC","aligned_b":"TATGAGTATCTCTTTTTTTTTTTTATCGAGAATTAAC","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"1ae453c7bd31c589309402b3d844693af82112a20e9584ecc61b095bbf458c1c","group_id":"17fc50efcb0f5888b58d73887096e25a4e416ca120197b15401f77beb5eb1288","id":"ALIGN-0008240","index":8240,"input":{"a":"TATTAGTATCTTTTTTTTTTTTTTTTCGGAATTAAC","b":"TATGAGTATCTCTTTTTTTTTTTTATCGAGAATTAAC","source_sequence":"TATTAGTATCTTTTTTTTTTTTTTTTCGGAATTAAC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGATCTCAAAG-TAGTAGTAGT-AGTAGTAGTGCGGCTGGC","aligned_b":"TGATCTCAAAGTTAGTAGTAGTAAGTAGTAGTGCGGCTGGC","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"21531cba9665f4e1056aedb5bfe7e16e30852c37471885ef2d4e075c4e67e49c","group_id":"36fd818fcfdeeaab07763124149cabde1651535e9db9d6c5acfd1b30019af196","id":"ALIGN-0008266","index":8266,"input":{"a":"TGATCTCAAAGTAGTAGTAGTAGTAGTAGTGCGGCTGGC","b":"TGATCTCAAAGTTAGTAGTAGTAAGTAGTAGTGCGGCTGGC","source_sequence":"TGATCTCAAAGTAGTAGTAGTAGTAGTAGTGCGGCTGGC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGGAAATCCGNNCGGAAACT-GGATCGCTCCGACT","aligned_b":"TGGAAATCCGANCGG-AACTAGGATCGCTCCGACT","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"a2f2ac8c97de23becfbc5b854166702f367225daf3661d72879a6c9601734fa5","group_id":"3f8af215fb25f6471078090f14a3a128a701038506f16a0b42017e74e5f8091b","id":"ALIGN-0008298","index":8298,"input":{"a":"TGGAAATCCGNNCGGAAACTGGATCGCTCCGACT","b":"TGGAAATCCGANCGGAACTAGGATCGCTCCGACT","source_sequence":"TGGAAATCCGNNCGGAAACTGGATCGCTCCGACT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATGCGTTCGGGCGGCGGC-GGCGATCTGGAT","aligned_b":"ATGCGTTCGGGCGGGGGCAGGCGATCTGGAC","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"749e23294677f60b9c6a270e4a28bbd40dae3430addb2d7649053fd05a8a09a7","group_id":"07e5280d7fb6bd61e4c2b14df971a7d9a8b33b0ce4028d439ce382b867e161fc","id":"ALIGN-0008311","index":8311,"input":{"a":"ATGCGTTCGGGCGGCGGCGGCGATCTGGAT","b":"ATGCGTTCGGGCGGGGGCAGGCGATCTGGAC","source_sequence":"ATGCGTTCGGGCGGCGGCGGCGATCTGGAT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-TACTGTGATCG-GGATTGAACGAGAGGCTATGTCTTAAT","aligned_b":"ATTAAGACATAGCCTCTCGTTC-AATCCCGATCACAGTA-","edit_distance":26,"within_threshold":false},"family":"reverse_complement","fingerprint":"8214563f5bdbab0f9813ca67965e90c567a10c3919bb26b341f20747648363c2","group_id":"b7cdc4914c390acdbe70184d79e85b97d2d01ba226839956ba4282b30e5c86b3","id":"ALIGN-0008319","index":8319,"input":{"a":"TACTGTGATCGGGATTGAACGAGAGGCTATGTCTTAAT","b":"ATTAAGACATAGCCTCTCGTTCAATCCCGATCACAGTA","source_sequence":"TACTGTGATCGGGATTGAACGAGAGGCTATGTCTTAAT","threshold":25},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAAAATATTCCCCAGTAAGGCGTAAC","aligned_b":"GAAATTATTCCCC-GTTATGCGTAAC","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"6c5b7e27213382bdb4a721b92046fe1423dff8f1194b65e2e8e5da803087f80d","group_id":"1fed83f50a6d217cba2ac7da6c1a466e979cd5d0f57a2b52e09dfade3ca9d963","id":"ALIGN-0008327","index":8327,"input":{"a":"GAAAATATTCCCCAGTAAGGCGTAAC","b":"GAAATTATTCCCCGTTATGCGTAAC","source_sequence":"GAAAATATTCCCCAGTAAGGCGTAAC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATGCGTTACNNACATTTGCCAGTGAAGCCGGAAAGAGCT","aligned_b":"CATGCGTTACNNACATTTGCCAGTGAAGCCGG-AAGAGCT","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"2a62fa0b82ca1df07a5f3ed4e6ba708314c6c402c1e7e0317cc7e5dda62b40ab","group_id":"a4715e0309c291e1f66222c5296ee3a7c7656a4010275cdef8f55ab14dd10bac","id":"ALIGN-0008328","index":8328,"input":{"a":"GATGCGTTACNNACATTTGCCAGTGAAGCCGGAAAGAGCT","b":"CATGCGTTACNNACATTTGCCAGTGAAGCCGGAAGAGCT","source_sequence":"GATGCGTTACNNACATTTGCCAGTGAAGCCGGAAAGAGCT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGCCTTCGGAAAAAAAAAAGCTGGCAACG","aligned_b":"GGCC-TC-GAAAAAAAAAGGCTGGCAACG","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"86c48d5127edd36fe9cf964c01ce6d9ad144aae1e2548b17c55cc4fd6be281f7","group_id":"4f35267754360ddf3a64a113cc37d7ee7ef1ca4c03c04ecd3a3c2ecc47530c44","id":"ALIGN-0008335","index":8335,"input":{"a":"GGCCTTCGGAAAAAAAAAAGCTGGCAACG","b":"GGCCTCGAAAAAAAAAGGCTGGCAACG","source_sequence":"GGCCTTCGGAAAAAAAAAAGCTGGCAACG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TG-C-CCCTGA-GGGGGGGGGGGGGGGGGGGGGCCGTGTTTT","aligned_b":"TGACGCCCTGACGGGGGGGGGGGGGGGGGGGGGCCGTGTTTT","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"a97074a0c9d306b626c1d008c86bb6be3374a2edd24490474914365e2edbe9df","group_id":"74f9adab20185ff7bc843d33d1943ee9d611e7e99de6d19437f038a8f50ee936","id":"ALIGN-0008336","index":8336,"input":{"a":"TGCCCCTGAGGGGGGGGGGGGGGGGGGGGGCCGTGTTTT","b":"TGACGCCCTGACGGGGGGGGGGGGGGGGGGGGGCCGTGTTTT","source_sequence":"TGCCCCTGAGGGGGGGGGGGGGGGGGGGGGCCGTGTTTT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCCGTGAGCTCCCCCACATTCAACTCGTCTACTTCCCAA","aligned_b":"GCCGTGAGC-CCCCCACATTCAACTCGTCTACTTCCCAA","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"a493c32e0e0bd84d1ab6431ddcf400873bb1401064df48c45711605754e62b1c","group_id":"ebb8faf5b5dd7bea38044c720b456b41ec5ceb00231ca66a6a1c22be5699679b","id":"ALIGN-0008337","index":8337,"input":{"a":"GCCGTGAGCTCCCCCACATTCAACTCGTCTACTTCCCAA","b":"GCCGTGAGCCCCCCACATTCAACTCGTCTACTTCCCAA","source_sequence":"GCCGTGAGCTCCCCCACATTCAACTCGTCTACTTCCCAA","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTCCAACGAAGGAGGAGGAGGAGGGCTATTATG","aligned_b":"GTCCAACGAAGGAGGAGGAGGAGGGCTA-TATA","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"3381b72afcaee72ce82b3c5cea0d379192cad967451c77ad92d29e83ea110c38","group_id":"4bedffb133ab5080756349f907719e74e82532668c671814a860607e4763c26a","id":"ALIGN-0008341","index":8341,"input":{"a":"GTCCAACGAAGGAGGAGGAGGAGGGCTATTATG","b":"GTCCAACGAAGGAGGAGGAGGAGGGCTATATA","source_sequence":"GTCCAACGAAGGAGGAGGAGGAGGGCTATTATG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGATTACGCGATCTCCACACCGGAA-CCACGCAGGGCACAGGAAT","aligned_b":"GGATTACGCGATCTCCACACCGGAACCCACGCAGGGCACAAGAGT","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"4b34b2c56db95d912ea5b10940924b4b9685c3c460f4ece0af5367322508b2d1","group_id":"421118cf2b2facba6873934e6a540f03edc2d791761a30f8aa51fcccc64b4144","id":"ALIGN-0008347","index":8347,"input":{"a":"GGATTACGCGATCTCCACACCGGAACCACGCAGGGCACAGGAAT","b":"GGATTACGCGATCTCCACACCGGAACCCACGCAGGGCACAAGAGT","source_sequence":"GGATTACGCGATCTCCACACCGGAACCACGCAGGGCACAGGAAT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTCTTAGTCATTATTATTATTA-TTGTGAGCCCA","aligned_b":"GTCTTA-TCATTATT-TTATTAGTTGTGAGCCCA","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"d0a73112912779896d929ea104bdce297e112a0e701bedae7edc657d9a3ffdea","group_id":"e617848b327c69d2980d66fb38fc068ed8f06c4fe7881328bff9cb307c0f8550","id":"ALIGN-0008351","index":8351,"input":{"a":"GTCTTAGTCATTATTATTATTATTGTGAGCCCA","b":"GTCTTATCATTATTTTATTAGTTGTGAGCCCA","source_sequence":"GTCTTAGTCATTATTATTATTATTGTGAGCCCA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAAGAGGGGCNNGCTACA-GTAAGAAAGGTATTCT-GTCCTACCAGTGA","aligned_b":"AAAGAGGGGCNNGCTACATGTAAGAAAGGTATTCTCGTCCTACCAGTGA","edit_distance":2,"within_threshold":true},"family":"literal_N","fingerprint":"291c15568dd75390e90e314aa62d5ea3b100b55dc789dc85a906919f99410712","group_id":"15ab1047fb699d2d8bccbe33c1dead2391d82270a17d9cb8264a1f4b1f78ef5e","id":"ALIGN-0008353","index":8353,"input":{"a":"AAAGAGGGGCNNGCTACAGTAAGAAAGGTATTCTGTCCTACCAGTGA","b":"AAAGAGGGGCNNGCTACATGTAAGAAAGGTATTCTCGTCCTACCAGTGA","source_sequence":"AAAGAGGGGCNNGCTACAGTAAGAAAGGTATTCTGTCCTACCAGTGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTCAATCG-TNNAATAAAGCGAGCGAGAATCGTGAATCACCAGTCTGG","aligned_b":"TGTCAATNGATNNAATAAAGCGAGCGAGAATCG-GAATCACCAGTC-GG","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"f06718d7f47ab81de21fe95a9a3f4973231ad43e588da1a2935ba5a70efce9a3","group_id":"ac617dff0135faa5966902a21590636d08aadae92fce048571af809657d2f0af","id":"ALIGN-0008358","index":8358,"input":{"a":"TGTCAATCGTNNAATAAAGCGAGCGAGAATCGTGAATCACCAGTCTGG","b":"TGTCAATNGATNNAATAAAGCGAGCGAGAATCGGAATCACCAGTCGG","source_sequence":"TGTCAATCGTNNAATAAAGCGAGCGAGAATCGTGAATCACCAGTCTGG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTATGTAGCTTTTTCGGTAAAACTTGTAACACCATAATCTCCGTCTGG","aligned_b":"CTATGTAGCTTTTTCGGTAAAACTTGTAACACCATAATCTCC-TCTGG","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"d95d355d1061f1eec6a363dec94c8461d8f3a9eb1f1093249dbd6a2bb60473a5","group_id":"8cfe8b1583db4a24e6da9831e8b14f1128b2c25763b77899afe53f43627f6b87","id":"ALIGN-0008392","index":8392,"input":{"a":"CTATGTAGCTTTTTCGGTAAAACTTGTAACACCATAATCTCCGTCTGG","b":"CTATGTAGCTTTTTCGGTAAAACTTGTAACACCATAATCTCCTCTGG","source_sequence":"CTATGTAGCTTTTTCGGTAAAACTTGTAACACCATAATCTCCGTCTGG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGACTGGACGATTTCGAACTC--CAAATCT","aligned_b":"AGATTTG--GAGTTCGAAATCGTCCAGTCG","edit_distance":12,"within_threshold":true},"family":"reverse_complement","fingerprint":"8006edb6635bca5c3deefa327909d33798ee30f47f96d14057bae25e52f1dd69","group_id":"d2b6add121575699dc710b72bbe988994b5b6944f5fa30a41abaa4b862165e56","id":"ALIGN-0008409","index":8409,"input":{"a":"CGACTGGACGATTTCGAACTCCAAATCT","b":"AGATTTGGAGTTCGAAATCGTCCAGTCG","source_sequence":"CGACTGGACGATTTCGAACTCCAAATCT","threshold":12},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTGCATCCCGGTGGTGGTATAAGAGAA","aligned_b":"-TGCATCCCGGTGTTGGTATAAGAGAA","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"21d3fe971a06998b5e4f84d0cc16c3d8e7ee2b7124e9eb851eff8aaf90f68f44","group_id":"f13bbcdd9475da74438bf1d1bf60050408750c7d8791b65c998a3c805dfb565a","id":"ALIGN-0008426","index":8426,"input":{"a":"TTGCATCCCGGTGGTGGTATAAGAGAA","b":"TGCATCCCGGTGTTGGTATAAGAGAA","source_sequence":"TTGCATCCCGGTGGTGGTATAAGAGAA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--GTA--TC-TATACGATTATACTGC-AGTTAGGAG-A-AATTGACTTTGTCCTCCGA","aligned_b":"TCGGAGGACAAAGTCAATT-T-CTCCTAACT-GCAGTATAATCG--TAT-AGATAC--","edit_distance":32,"within_threshold":true},"family":"reverse_complement","fingerprint":"441b3061a9851c200061f3d99a206ba198f40483126c354fce484a2270eb9a85","group_id":"7ca9a8e99d6c763595b4381acbca8a824fe6c4b6f376ed6f84a85a57334f6e11","id":"ALIGN-0008439","index":8439,"input":{"a":"GTATCTATACGATTATACTGCAGTTAGGAGAAATTGACTTTGTCCTCCGA","b":"TCGGAGGACAAAGTCAATTTCTCCTAACTGCAGTATAATCGTATAGATAC","source_sequence":"GTATCTATACGATTATACTGCAGTTAGGAGAAATTGACTTTGTCCTCCGA","threshold":33},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCGGGGCCA-CACACGCTTAGCAATTGATGG-CACTG","aligned_b":"-CAGTGCCATCAATTGCTAAGCGTGTG-TGGCCCCGG","edit_distance":15,"within_threshold":true},"family":"reverse_complement","fingerprint":"e788b5e81f8541a99569d07245587c14c655bc01cbbec4a77622d528f522f40c","group_id":"56cfc26ba6c122daa2c39e4fe242f3cb3ef19189b32b256996b05dfb245d1628","id":"ALIGN-0008444","index":8444,"input":{"a":"CCGGGGCCACACACGCTTAGCAATTGATGGCACTG","b":"CAGTGCCATCAATTGCTAAGCGTGTGTGGCCCCGG","source_sequence":"CCGGGGCCACACACGCTTAGCAATTGATGGCACTG","threshold":16},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TATAAGCTCATGATGATGCCGAACTCT","aligned_b":"TA-AAGCTCATGATGATGCCGAACT-T","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"f605b1b7937fbe5685886518363069ffd34709941d193f065dc31d2de1e6eb4c","group_id":"f2501a335e24ccfa6925f2f0a106d8fadf87134b2205a446c41ce85173d52dcd","id":"ALIGN-0008446","index":8446,"input":{"a":"TATAAGCTCATGATGATGCCGAACTCT","b":"TAAAGCTCATGATGATGCCGAACTT","source_sequence":"TATAAGCTCATGATGATGCCGAACTCT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATGCGCTCCTTTTTTTTTTTTTCATCCTTTT","aligned_b":"GATGCGCTCC-TTTTTTTTTTTTCATCCTTTT","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"8fa1325b811a1e2c922a48547568e5214289d7bb449497021e8e05e1fa3ae8be","group_id":"2f8c5cb9a8c33fe644e4fc40998ccad9e62f4f053dbff66ba38a4ded7d190d4f","id":"ALIGN-0008450","index":8450,"input":{"a":"GATGCGCTCCTTTTTTTTTTTTTCATCCTTTT","b":"GATGCGCTCCTTTTTTTTTTTTCATCCTTTT","source_sequence":"GATGCGCTCCTTTTTTTTTTTTTCATCCTTTT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGAGATGCCGTATGCGGACCCGTATGGCGCGACAGGATCTAAACACATT","aligned_b":"AGGAGATG-CGTATGCTGA-CCGCATGGCGCGACAGGAGCTAAACACATT","edit_distance":5,"within_threshold":false},"family":"clustered_indels","fingerprint":"47630ce92794ce0ed13b8b0c82e1d9fee72daddeeb988b74ecae8c20d254f132","group_id":"26288b6126e29b4e6397488f5bbab0d46f83869f3c557a5574c79fc824de3c1c","id":"ALIGN-0008457","index":8457,"input":{"a":"AGGAGATGCCGTATGCGGACCCGTATGGCGCGACAGGATCTAAACACATT","b":"AGGAGATGCGTATGCTGACCGCATGGCGCGACAGGAGCTAAACACATT","source_sequence":"AGGAGATGCCGTATGCGGACCCGTATGGCGCGACAGGATCTAAACACATT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGATCCGCACTATG-CGGATC-TCTCAGTACTGGGGTAGCATCGGGA","aligned_b":"GGATCCGCACTATGACGGATCTTCTAAG-ACT-GGGTAGCATCGGGA","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"0d233c722702000c53259adc03deec89737ed1b7bdd4beccc6c3e4f597eda69e","group_id":"0b4e6ef5709c92cb2c8da7739711bc61671895caf83cf7e1f322543feed6032b","id":"ALIGN-0008462","index":8462,"input":{"a":"GGATCCGCACTATGCGGATCTCTCAGTACTGGGGTAGCATCGGGA","b":"GGATCCGCACTATGACGGATCTTCTAAGACTGGGTAGCATCGGGA","source_sequence":"GGATCCGCACTATGCGGATCTCTCAGTACTGGGGTAGCATCGGGA","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCTACTTAGTGCCCTAGAGTTACTGAC-CT-GGATGTTCAGTA-CG","aligned_b":"-CGTACTGAACATCC-AG-GTCAGTAACTCTAGGGCACTAAGTAGAA","edit_distance":23,"within_threshold":true},"family":"reverse_complement","fingerprint":"4f8550c5410f1ace5344f54cd97a2fb3bbcb4fc9857d139d95f08e30ed8ca949","group_id":"d70256513e838a34f806fb3a8587ff044386716e5ef99520b961564a174ca264","id":"ALIGN-0008464","index":8464,"input":{"a":"TTCTACTTAGTGCCCTAGAGTTACTGACCTGGATGTTCAGTACG","b":"CGTACTGAACATCCAGGTCAGTAACTCTAGGGCACTAAGTAGAA","source_sequence":"TTCTACTTAGTGCCCTAGAGTTACTGACCTGGATGTTCAGTACG","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"-TTAGGAGTTAATGGTC-TTAGTTATTAAC","aligned_b":"GTTAATAACTAA-GACCATTAACTCCTAA-","edit_distance":14,"within_threshold":true},"family":"reverse_complement","fingerprint":"687fed4f8b20b8ed895a68f21d5b870f7b67184c7ccf478940127371df85e3c9","group_id":"6637425b5beb160cdfe6ffe78a7d0b9dc29165ddcc32cac85ae76e2af5b37df1","id":"ALIGN-0008474","index":8474,"input":{"a":"TTAGGAGTTAATGGTCTTAGTTATTAAC","b":"GTTAATAACTAAGACCATTAACTCCTAA","source_sequence":"TTAGGAGTTAATGGTCTTAGTTATTAAC","threshold":14},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGACGGTACTCCCCCCCCCCCCAGGCGGAGCA","aligned_b":"AGACGGTACTCCCCCCCCCCCCAGGCGGAG-A","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"c43c5d24d19b42ce4740da1ba0eca72ea9d573b3f0a01ff458a7c5ba64ee384c","group_id":"a9a8835160fc2e7e93acf2982437555c6bec523928f4aeab58b2b25ec7ae948f","id":"ALIGN-0008475","index":8475,"input":{"a":"AGACGGTACTCCCCCCCCCCCCAGGCGGAGCA","b":"AGACGGTACTCCCCCCCCCCCCAGGCGGAGA","source_sequence":"AGACGGTACTCCCCCCCCCCCCAGGCGGAGCA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAGTCCTCTACTACTACTACTACTACTGACCATGCT","aligned_b":"AAGATCTCTACGACTACTACTACTACTG-CCATGCT","edit_distance":4,"within_threshold":false},"family":"tandem_repeat","fingerprint":"6247fec067c8db3e85c4b9953f9e445671ba6db34a6a4fedca74fb1f708ecfb9","group_id":"346e5737a16a3ce85e1830c91b49ca1716200256cc28772a2f59ccf970babd38","id":"ALIGN-0008501","index":8501,"input":{"a":"AAGTCCTCTACTACTACTACTACTACTGACCATGCT","b":"AAGATCTCTACGACTACTACTACTACTGCCATGCT","source_sequence":"AAGTCCTCTACTACTACTACTACTACTGACCATGCT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTAGATATGT-GCCTAGTATACAGGCCTA-T","aligned_b":"-ATAGGCCTGTATACTAG-GCACATATCTAGA","edit_distance":16,"within_threshold":true},"family":"reverse_complement","fingerprint":"217bd5710873b6f9ba0836b33721fd27cd9ba0e2d903d01f0881cb5df19940e2","group_id":"8ef086cb94ff73d233bb83f24ed1cf7a37f4da3dcff48d4732ecb3d83fdf152a","id":"ALIGN-0008504","index":8504,"input":{"a":"TCTAGATATGTGCCTAGTATACAGGCCTAT","b":"ATAGGCCTGTATACTAGGCACATATCTAGA","source_sequence":"TCTAGATATGTGCCTAGTATACAGGCCTAT","threshold":16},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTGTATCG-AANNATCATGTATCTAT","aligned_b":"CTGTATCGAAANNATCAT-T-TCTAT","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"3410827ff04587e091fb2ce7e62a7ff0888f4c9493a3372c40acd98cfa36ced4","group_id":"1e5458d96d15252218e6fc6dabca5d7f656c83b9bfd6860204fb3c29b3712740","id":"ALIGN-0008508","index":8508,"input":{"a":"CTGTATCGAANNATCATGTATCTAT","b":"CTGTATCGAAANNATCATTTCTAT","source_sequence":"CTGTATCGAANNATCATGTATCTAT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTGTCACTANNTTTTATATATCTCCAGAATGATAGGGACGTTT","aligned_b":"GTTGTCACTANN-TTTATATATCTCCAGAATGATAGGGACGTTT","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"d7ae4b9842a3c90ac4908cc72667c910402794012f24a73bcccd5332fdafe522","group_id":"c2bdcecd51598d3dd904282b4b4b689ead51a0a839c4070a565f39c82619f26d","id":"ALIGN-0008513","index":8513,"input":{"a":"GTTGTCACTANNTTTTATATATCTCCAGAATGATAGGGACGTTT","b":"GTTGTCACTANNTTTATATATCTCCAGAATGATAGGGACGTTT","source_sequence":"GTTGTCACTANNTTTTATATATCTCCAGAATGATAGGGACGTTT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTATGAATCNNCATACAGATTTTACCCTCACAACGAA","aligned_b":"TCTA-GANTCNNCATACAGATTTTACCCTCACAAC-AA","edit_distance":3,"within_threshold":false},"family":"literal_N","fingerprint":"cf9f06d609acf540269ac9c434787e0378c92a43c7bfbacbc7799a879371ad64","group_id":"e5117fdd20f2c477f692298d25eaff8b6bf3a0188108d72b2294402333cff898","id":"ALIGN-0008528","index":8528,"input":{"a":"TCTATGAATCNNCATACAGATTTTACCCTCACAACGAA","b":"TCTAGANTCNNCATACAGATTTTACCCTCACAACAA","source_sequence":"TCTATGAATCNNCATACAGATTTTACCCTCACAACGAA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAC-AATACTGNNTTGCAGCGGCCTAAAGGCTCCACTTCATACAAT","aligned_b":"AACAAATACTGNNTTGCAG-GGCCTAAAGGCTCCACTTCATACAAT","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"8493bd305320e8395eb3d096d7c22d8bfefaa34655d7029664fe64acee612f6f","group_id":"c48349f92ebac3172fd17d7b654556801586de88e487d51962c48906426a103a","id":"ALIGN-0008533","index":8533,"input":{"a":"AACAATACTGNNTTGCAGCGGCCTAAAGGCTCCACTTCATACAAT","b":"AACAAATACTGNNTTGCAGGGCCTAAAGGCTCCACTTCATACAAT","source_sequence":"AACAATACTGNNTTGCAGCGGCCTAAAGGCTCCACTTCATACAAT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTAG-ATCCCCAAAAAAAAGAGACCGGGA","aligned_b":"GTAGAATCCCC-AAAAAAAGAGA-CGGGA","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"cfe3bd2d067ab102382103378be351b8e62d2eb4f2915808c786d8ba5418bdc4","group_id":"7ca8add17b3a02b585e3699d57b2721f827417303c9b351f62515481595f7f80","id":"ALIGN-0008545","index":8545,"input":{"a":"GTAGATCCCCAAAAAAAAGAGACCGGGA","b":"GTAGAATCCCCAAAAAAAGAGACGGGA","source_sequence":"GTAGATCCCCAAAAAAAAGAGACCGGGA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCTCGGATGNNAGTTGGCGATAGACAGAAA","aligned_b":"AGCTCGGATG-NAGTTGGC-ATAAACAG-AA","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"569e0931fcc4a8c8c66195fbed25065c0dd5a2ef2e755726541c19ba1f68b678","group_id":"e2fc724367b431063a9b70108e81255aaeefda5b45459ada05778fc7be3bb4d3","id":"ALIGN-0008553","index":8553,"input":{"a":"AGCTCGGATGNNAGTTGGCGATAGACAGAAA","b":"AGCTCGGATGNAGTTGGCATAAACAGAA","source_sequence":"AGCTCGGATGNNAGTTGGCGATAGACAGAAA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTGCGCCCCTATCTGAGGAATGGTGCACCTTTGATTA-AGA-GTCCGAAAT","aligned_b":"ATTTCG-GACTCT-TAATCAAAGGTGCACCATTCCTCAGATAGGGGCGCAGA","edit_distance":24,"within_threshold":false},"family":"reverse_complement","fingerprint":"7beffc31c2b8d226eda772c0fcb0664576c5f9e75974ceb72ec83fc5e0e0ed77","group_id":"4b85811bb9bf38a08c1b4ce3bb8b8616bfe4c26fbbf44937996334b504e921bb","id":"ALIGN-0008564","index":8564,"input":{"a":"TCTGCGCCCCTATCTGAGGAATGGTGCACCTTTGATTAAGAGTCCGAAAT","b":"ATTTCGGACTCTTAATCAAAGGTGCACCATTCCTCAGATAGGGGCGCAGA","source_sequence":"TCTGCGCCCCTATCTGAGGAATGGTGCACCTTTGATTAAGAGTCCGAAAT","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTGCG-ACATATGATGATGATGATGATGATGATGA-GAGCT","aligned_b":"TTGCGAACATATGATGATGATGATGATGATG-TGAGGAGCT","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"49961a3a5b72ebdad354bface5ea971da26f0ca257c6f699612c6570ef27fc09","group_id":"c4674605c94daeee901cd3bca7b4fca8066ab20c566948898f3fbcb1231b8baf","id":"ALIGN-0008581","index":8581,"input":{"a":"GTGCGACATATGATGATGATGATGATGATGATGAGAGCT","b":"TTGCGAACATATGATGATGATGATGATGATGTGAGGAGCT","source_sequence":"GTGCGACATATGATGATGATGATGATGATGATGAGAGCT","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATCTTAGTGNNCTCGACTCGCAGAAAATCGACGAAT","aligned_b":"CATCTTAGTGNNCTCGACTCNCAGAAAATCGACGAAT","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"4c4704a6ded8723e5f2e76ca14a91c583df8c4486a09542c95ecbf3ee52cc140","group_id":"9d040fcb170d70ac373eb3b5c3a1d38b9104cd6e095ea8d7bcb0c5beb38a6cb7","id":"ALIGN-0008583","index":8583,"input":{"a":"CATCTTAGTGNNCTCGACTCGCAGAAAATCGACGAAT","b":"CATCTTAGTGNNCTCGACTCNCAGAAAATCGACGAAT","source_sequence":"CATCTTAGTGNNCTCGACTCGCAGAAAATCGACGAAT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTTACACGTCTTTTTTTTTTTTTAAGGTTAAG","aligned_b":"CTTACACGTCTTTTTTTTTTTTTAAGGTTAGG","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"e88709727596a3f54623f2f4060bf46c320e6840dabf262647b595b6eecd1d44","group_id":"53c3bb09eef05130c09afa7cfcf5509aacbb4be78df0e869860702100d03dc1b","id":"ALIGN-0008585","index":8585,"input":{"a":"CTTACACGTCTTTTTTTTTTTTTAAGGTTAAG","b":"CTTACACGTCTTTTTTTTTTTTTAAGGTTAGG","source_sequence":"CTTACACGTCTTTTTTTTTTTTTAAGGTTAAG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AACT-ATCTAANNCGACTAAGCGTGACACTTG","aligned_b":"AACTCATNTAANNCGACTAAGCGTGA-ACTTG","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"63a6a3fd1141914bc41a22445650e5547051219805ec92cf38e1ae538c404a67","group_id":"da425a55813c9b068ecd69440b4188460ad63971c3741070b0bf09861cd11c6f","id":"ALIGN-0008588","index":8588,"input":{"a":"AACTATCTAANNCGACTAAGCGTGACACTTG","b":"AACTCATNTAANNCGACTAAGCGTGAACTTG","source_sequence":"AACTATCTAANNCGACTAAGCGTGACACTTG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTA-GCATCCGCGTGCGTACGTGTCC","aligned_b":"GGACACGTACGCACGCGGATG-CTAA","edit_distance":14,"within_threshold":true},"family":"reverse_complement","fingerprint":"e073f572a7c8694372947b4468a43443e672f43ee18f6777506ab667e505ea08","group_id":"8abae24f67c7a92f36020b76eae87fbe9830be52bbb08faa46fce5ef693656fd","id":"ALIGN-0008589","index":8589,"input":{"a":"TTAGCATCCGCGTGCGTACGTGTCC","b":"GGACACGTACGCACGCGGATGCTAA","source_sequence":"TTAGCATCCGCGTGCGTACGTGTCC","threshold":15},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCGGATTGGCCTAGAGAAAGGCCTCGTATTCAATCCGCTCGCGGCAACAG","aligned_b":"TCGGATTGGCCTAGAGAAAGGCCTCGTATTCAATCCGCTCGCGCCAACAG","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"720322a7a504be9a6f5ea29117a7a9c6f8218c9985756e55d0896c8f052d3252","group_id":"6b240ebb3c7245fc168eef4d0b57ca37c2285d92d16d4d4933e1efd83d20f95b","id":"ALIGN-0008592","index":8592,"input":{"a":"TCGGATTGGCCTAGAGAAAGGCCTCGTATTCAATCCGCTCGCGGCAACAG","b":"TCGGATTGGCCTAGAGAAAGGCCTCGTATTCAATCCGCTCGCGCCAACAG","source_sequence":"TCGGATTGGCCTAGAGAAAGGCCTCGTATTCAATCCGCTCGCGGCAACAG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAGACATCTGAAAAAAAAAAAAGAGGACGGGG","aligned_b":"TAGACATCTGAAAAAAAAAAAAGTGGACGGGG","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"d964639e0c094771248eb08c2decad5b2f185458c2d48a7076fa9bfa41fdc664","group_id":"f623bea31715719e97bf6bbc89f1dba7300753dda81e179ab7ab27b3f917dfa5","id":"ALIGN-0008595","index":8595,"input":{"a":"TAGACATCTGAAAAAAAAAAAAGAGGACGGGG","b":"TAGACATCTGAAAAAAAAAAAAGTGGACGGGG","source_sequence":"TAGACATCTGAAAAAAAAAAAAGAGGACGGGG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTTGCCTTTCNNGTC-GAGCTGTAACCTAAGTTATCAG","aligned_b":"C-TGCCTTTCNNGTCGGAGCTGTANCCTAAGTTATCAG","edit_distance":3,"within_threshold":false},"family":"literal_N","fingerprint":"278610ddc999205f207f758257ab857e66bec39ee759cfe058f00f62665c9f35","group_id":"0b6d8cc7b8969824b0cf20685291b3e4215844bbc39b8b77a204354bb9e9bc27","id":"ALIGN-0008603","index":8603,"input":{"a":"CTTGCCTTTCNNGTCGAGCTGTAACCTAAGTTATCAG","b":"CTGCCTTTCNNGTCGGAGCTGTANCCTAAGTTATCAG","source_sequence":"CTTGCCTTTCNNGTCGAGCTGTAACCTAAGTTATCAG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCACCTGATGTTTTTTTTTT-TTTAAAAAGCTC","aligned_b":"TCACCAGATGTTTTTTTTTTCTTAAAAAAGCTC","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"de65582c26706c11baef018defb158fa75799d1e80e88fa71c8cdb7f3fd1417a","group_id":"aad3cadd641731c66216236282c30b1b8a4d2af6c79dde9ad65e59b3e86c3745","id":"ALIGN-0008610","index":8610,"input":{"a":"TCACCTGATGTTTTTTTTTTTTTAAAAAGCTC","b":"TCACCAGATGTTTTTTTTTTCTTAAAAAAGCTC","source_sequence":"TCACCTGATGTTTTTTTTTTTTTAAAAAGCTC","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTGGAGTCGACC-C-GTTCCGACTTAGGACGGCGAGTCATGTCTAAAAA","aligned_b":"GT-GAGTCGACCTCGGTTCCG-CTTAGGACGGCGAGTCATGTCTAAAAA","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"98524cb1886d95d0a5f1c75e0ea73bb4e7e6081980c02002540c8f9acb95764a","group_id":"427ebee337faf1e8e53648c3e4b5d272ac42e16cd3004f59aacfd5415fba070b","id":"ALIGN-0008632","index":8632,"input":{"a":"GTGGAGTCGACCCGTTCCGACTTAGGACGGCGAGTCATGTCTAAAAA","b":"GTGAGTCGACCTCGGTTCCGCTTAGGACGGCGAGTCATGTCTAAAAA","source_sequence":"GTGGAGTCGACCCGTTCCGACTTAGGACGGCGAGTCATGTCTAAAAA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTTCTGAGGTCCTCCTCCTCCTCGTCCATA","aligned_b":"TTTCTGAGG-CCTCCT-CTCCTCGCCCATA","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"8b62ba0d3491cb6f5bc1cf3b482e7d7aec2d6a8b4f222510fb77a06bf238a6ea","group_id":"1a2fa745710ccab336c98ea01bc5402facabb8aa4d786537dd1a69de5938b9b7","id":"ALIGN-0008646","index":8646,"input":{"a":"TTTCTGAGGTCCTCCTCCTCCTCGTCCATA","b":"TTTCTGAGGCCTCCTCTCCTCGCCCATA","source_sequence":"TTTCTGAGGTCCTCCTCCTCCTCGTCCATA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCGCTTATCAGGAGAAA-GGCCGTCGTGAACGCTAGGTTTT","aligned_b":"TCGCTTATCAGGAGAAATGGCCGTCGTGAACGCTAGGTTTT","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"f7415214e54fb4d10c970c0727eafcb374a5be7a5c85a29a3ee65a493300f61e","group_id":"4ae1baefa0f22166982f49a45f3365e908a10010e30131f96666690ea9fc3ebe","id":"ALIGN-0008662","index":8662,"input":{"a":"TCGCTTATCAGGAGAAAGGCCGTCGTGAACGCTAGGTTTT","b":"TCGCTTATCAGGAGAAATGGCCGTCGTGAACGCTAGGTTTT","source_sequence":"TCGCTTATCAGGAGAAAGGCCGTCGTGAACGCTAGGTTTT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAGATCATCACCACCACCACCACC-ACCACCCGAAGAACA","aligned_b":"TAGATCATCACCACCACCACCACCGACCACCCGAAGAAC-","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"4821c432b68fb94b8d026fead2b67ab288d6cd6b86808c3811208fa386217349","group_id":"6f7a4bfb8fe1d3486f2cb60ef6ef5198804a01e75901ce6959585838fca43097","id":"ALIGN-0008671","index":8671,"input":{"a":"TAGATCATCACCACCACCACCACCACCACCCGAAGAACA","b":"TAGATCATCACCACCACCACCACCGACCACCCGAAGAAC","source_sequence":"TAGATCATCACCACCACCACCACCACCACCCGAAGAACA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AATCAGAACTGACTAAACAATGACCCCGGGCCA","aligned_b":"AATCAGAGCTGACTAAACAA-GACCCCGGGCCA","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"293975a529d2f0c8501e02310840217856e80db6d07f51977fab71ea982355a2","group_id":"de6fb519e6e3d79b664f775076d37a9f33a6b5cb58ac8edecf2b81154e4f1d06","id":"ALIGN-0008672","index":8672,"input":{"a":"AATCAGAACTGACTAAACAATGACCCCGGGCCA","b":"AATCAGAGCTGACTAAACAAGACCCCGGGCCA","source_sequence":"AATCAGAACTGACTAAACAATGACCCCGGGCCA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGCGACTTAGAGGAGGAGGAGGAGGAGG-AGGTAACG-AGG","aligned_b":"CGCGACTTAGAGGAGGAGGAGGAGGAGGAAGATAACGCAGG","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"e1d362f2a1d2c569e6dadf344d11239eb046e6f4c9b0816b36edd26bc4b77ed9","group_id":"80ea4305fc235066893cb8234201f91bdb9dd15605bc56dd2c3a3c4b67689c2c","id":"ALIGN-0008676","index":8676,"input":{"a":"CGCGACTTAGAGGAGGAGGAGGAGGAGGAGGTAACGAGG","b":"CGCGACTTAGAGGAGGAGGAGGAGGAGGAAGATAACGCAGG","source_sequence":"CGCGACTTAGAGGAGGAGGAGGAGGAGGAGGTAACGAGG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TAGAGGAATAGGAATGGACATATGCTAACAGGAAATTAACGTCATTA","aligned_b":"TAGAGGAATAGGAAAGGACATATGTTAACTGGAAATTAACGT-ATTA","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"50f229c6691164153512f30bc4f52fc0e14301da51d886249b30b69089bd8ba3","group_id":"8198d447e66123bca2cc834bfcde790a6378e2159fc3f761512764c85f378366","id":"ALIGN-0008682","index":8682,"input":{"a":"TAGAGGAATAGGAATGGACATATGCTAACAGGAAATTAACGTCATTA","b":"TAGAGGAATAGGAAAGGACATATGTTAACTGGAAATTAACGTATTA","source_sequence":"TAGAGGAATAGGAATGGACATATGCTAACAGGAAATTAACGTCATTA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--TTTTGCGC-CCCCAGTCTCGTTAGCTTACCCGC","aligned_b":"GCGGGTAAGCTAACGAGACT-GGGGGC--GCAAAA","edit_distance":23,"within_threshold":true},"family":"reverse_complement","fingerprint":"2f21ec2a3fb6ac2d324d22105124aef6e23993e138051fa27448bfa8c2989194","group_id":"2fa76c57553ab08081a2240d4a78fd5bf7e8d3c8037fdaebc4cbeea8ebc0d0d1","id":"ALIGN-0008689","index":8689,"input":{"a":"TTTTGCGCCCCCAGTCTCGTTAGCTTACCCGC","b":"GCGGGTAAGCTAACGAGACTGGGGGCGCAAAA","source_sequence":"TTTTGCGCCCCCAGTCTCGTTAGCTTACCCGC","threshold":24},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTGGTTACATTTTTTTTTTTTTTTTATTTGGCC","aligned_b":"TGGGGTTACA-TGTTTTTTTTTTTTTATTT-GCC","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"b31d2f909acdc8faeb701603e096e0dd2f15d3e338cf9d545941bbd42d83fe6b","group_id":"56f06cf587f3962488833f065fb82963325cfef14f98836b5d2e949e1fa6c2ab","id":"ALIGN-0008730","index":8730,"input":{"a":"TGTGGTTACATTTTTTTTTTTTTTTTATTTGGCC","b":"TGGGGTTACATGTTTTTTTTTTTTTATTTGCC","source_sequence":"TGTGGTTACATTTTTTTTTTTTTTTTATTTGGCC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGACTGTTGACCCCCCCCCCCAATCTGTTAT","aligned_b":"AGA-TGTTGACCCCCCCCCCCAATCTGAT-T","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"e2b73adf3ccd7c7eafb018209a456905f5d7337e990ac2ac36001056d5364f6f","group_id":"07a7ed99735991632cceddd24d25a7145281eea961885ef98063292d4863c05f","id":"ALIGN-0008740","index":8740,"input":{"a":"AGACTGTTGACCCCCCCCCCCAATCTGTTAT","b":"AGATGTTGACCCCCCCCCCCAATCTGATT","source_sequence":"AGACTGTTGACCCCCCCCCCCAATCTGTTAT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"AGGATTATCTTCTTCTTCTTCTTCTTCTTCGTG-TACATC","aligned_b":"AGG-TTATC-TCTTCTTC-TCTTCTTCTTCGTGTTACATC","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"97348a9a91992af82a6efa6e0c5340bdf19c7b7006e5090176fb2dc7619572e6","group_id":"153b21794857b1861d02b3609f3126678879674842893ec13bbe3b0b9634f22b","id":"ALIGN-0008766","index":8766,"input":{"a":"AGGATTATCTTCTTCTTCTTCTTCTTCTTCGTGTACATC","b":"AGGTTATCTCTTCTTCTCTTCTTCTTCGTGTTACATC","source_sequence":"AGGATTATCTTCTTCTTCTTCTTCTTCTTCGTGTACATC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TTCTTAGCTTTGCCACT-ATTCTGACTTTCCAGTCT-GTCA","aligned_b":"-TGACAGACTGGAAAGTCAGAAT-AGTGGCAAAGCTAAGAA","edit_distance":25,"within_threshold":true},"family":"reverse_complement","fingerprint":"b5c16b97d28f179a8698832b87171f3125cb38e10e42e51215dac7df23b4d065","group_id":"07ffc5c3ea6cddd8f8978dc3ef8af5ffe5f1d1099f381812412d0df959af882a","id":"ALIGN-0008779","index":8779,"input":{"a":"TTCTTAGCTTTGCCACTATTCTGACTTTCCAGTCTGTCA","b":"TGACAGACTGGAAAGTCAGAATAGTGGCAAAGCTAAGAA","source_sequence":"TTCTTAGCTTTGCCACTATTCTGACTTTCCAGTCTGTCA","threshold":26},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TATTATGACCCTCCTCCTCGTTGCGAA","aligned_b":"TATTATGACCCT-CTCCT-GTTGCGAA","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"b28ec12c12f518528f9e0ba94256a19edb1584da435a81ef8b3c5655a10de646","group_id":"5b018e9b2f7ed3913a1b5cbff0b5a71cfa56ab08acb4249e306cbff0cd803886","id":"ALIGN-0008786","index":8786,"input":{"a":"TATTATGACCCTCCTCCTCGTTGCGAA","b":"TATTATGACCCTCTCCTGTTGCGAA","source_sequence":"TATTATGACCCTCCTCCTCGTTGCGAA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AATCAGTCATGTACGTCCCGGTC-GGCTAC","aligned_b":"AATCAGTCATGTACGTCCCGGTCGGGCTAC","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"8da760fd6bec7989b729333222288ce3060d1402da4b1f721c280d97b901c30a","group_id":"80f879cf49310434fd196b2c76710d318170e06ea4349c9b705d7bd3d76606bd","id":"ALIGN-0008792","index":8792,"input":{"a":"AATCAGTCATGTACGTCCCGGTCGGCTAC","b":"AATCAGTCATGTACGTCCCGGTCGGGCTAC","source_sequence":"AATCAGTCATGTACGTCCCGGTCGGCTAC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTACCTCTGNNGTAGGCCCTGTTCAAAT-GCACTCCAGCCCA","aligned_b":"CGTACCTCTGNNGTAGGCCCTGTTCAAATGGCACTCCAGCCCA","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"7ac91a15a99434c707cf8503a1c47794fdcc0f2ca7a9712298d508843b2410a0","group_id":"b0ded05d7fd8f5d0caf3b7afc405d6d3c41774100b0781a3c6bf375f92fcdb5c","id":"ALIGN-0008793","index":8793,"input":{"a":"CGTACCTCTGNNGTAGGCCCTGTTCAAATGCACTCCAGCCCA","b":"CGTACCTCTGNNGTAGGCCCTGTTCAAATGGCACTCCAGCCCA","source_sequence":"CGTACCTCTGNNGTAGGCCCTGTTCAAATGCACTCCAGCCCA","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTAAAACACTGGTTCGTATTACTAGGGCTCTCAGCCAT-CGTAAG","aligned_b":"CGTAAAACACTGGTTCGTATTACTAGGGCTCTC-GCCATGCGTAAG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"253d8766a45865780b53761bd6dd49b3a838d78079656181da5706bf8a8bac06","group_id":"77c5dbe5e9473189f8d4ce0bc4baaf43639f1fbf27955c51422c4a0110009543","id":"ALIGN-0008807","index":8807,"input":{"a":"CGTAAAACACTGGTTCGTATTACTAGGGCTCTCAGCCATCGTAAG","b":"CGTAAAACACTGGTTCGTATTACTAGGGCTCTCGCCATGCGTAAG","source_sequence":"CGTAAAACACTGGTTCGTATTACTAGGGCTCTCAGCCATCGTAAG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGCTTAT-GTTCGTCGTCGACTATGGTT","aligned_b":"TCCTTATAGTT-GTCG-CGA-TATGGTT","edit_distance":5,"within_threshold":false},"family":"tandem_repeat","fingerprint":"09e9747bd5dee0ef70b0207287ee6b8ba518cdb258aa60e940c37c2a1623ca41","group_id":"a020a9cb950b15a351e3bdb778bb607636f1b5c469d70f978ee590cc27f9ee55","id":"ALIGN-0008836","index":8836,"input":{"a":"TGCTTATGTTCGTCGTCGACTATGGTT","b":"TCCTTATAGTTGTCGCGATATGGTT","source_sequence":"TGCTTATGTTCGTCGTCGACTATGGTT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGC-TACAAGGAC-GGTGTCCCTGGTTACGTGAGCGAGCTCCTAGGG","aligned_b":"CGCATACAGGGGCGGGTGTCCCTGGTTACGTGA-CGAGCTCCTAGGG","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"83d55b5e1e7fa22835a0f3fb38aef782da13f47f9f433c75f5d7393799f297cb","group_id":"499e2fd3e59b8a7aa1f2c6cab8f9cf5570040b8bbd884d50d555863aa52036a4","id":"ALIGN-0008837","index":8837,"input":{"a":"CGCTACAAGGACGGTGTCCCTGGTTACGTGAGCGAGCTCCTAGGG","b":"CGCATACAGGGGCGGGTGTCCCTGGTTACGTGACGAGCTCCTAGGG","source_sequence":"CGCTACAAGGACGGTGTCCCTGGTTACGTGAGCGAGCTCCTAGGG","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACTCGGT-A-GTTTGGTGCAGTAGACATGATCCA--","aligned_b":"--TGGATCATGTCTACTGCACCAAAC-T-ACCGAGT","edit_distance":18,"within_threshold":true},"family":"reverse_complement","fingerprint":"72d197a6a4bb2b1c1fb349d27bb5e4aa4630c95ae10a885e24083f71f594efdf","group_id":"b67c38b13db6845744a946a2ed80f3a62e5fd540b9ac306940eb0f49902b597d","id":"ALIGN-0008839","index":8839,"input":{"a":"ACTCGGTAGTTTGGTGCAGTAGACATGATCCA","b":"TGGATCATGTCTACTGCACCAAACTACCGAGT","source_sequence":"ACTCGGTAGTTTGGTGCAGTAGACATGATCCA","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CTATACATAGCTGCTG-CTGCTGAGGTACGC","aligned_b":"CTATACATAGCTGCTGCCTGCTGAGGTACG-","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"e2c579fc6788a44a474ff106a3bd704d4af16216e9b7c7a23cd4b625383b136d","group_id":"25aedf6976e4480cb340b35aa5078329b3d7bced649c54ee50d1994258369af6","id":"ALIGN-0008861","index":8861,"input":{"a":"CTATACATAGCTGCTGCTGCTGAGGTACGC","b":"CTATACATAGCTGCTGCCTGCTGAGGTACG","source_sequence":"CTATACATAGCTGCTGCTGCTGAGGTACGC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"TCCACTG-ACCCACCTCACCTCAAA-CATCA-CTGA","aligned_b":"TCCACTGCACCC-CCCCACCTCAAATCATCACCTGA","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"df02f849effd175b3c3aed16b40f4dc0f660cd6bd946b0bc7937d832a3757b61","group_id":"f44c7fa7f980974e93a3009dd8abaf17b943c4ea9306d13211fe197223ba6d9f","id":"ALIGN-0008987","index":8987,"input":{"a":"TCCACTGACCCACCTCACCTCAAACATCACTGA","b":"TCCACTGCACCCCCCCACCTCAAATCATCACCTGA","source_sequence":"TCCACTGACCCACCTCACCTCAAACATCACTGA","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCCTTCGT-A-TTTTTTT-TTTCTCTAGAAG","aligned_b":"GCCTTCGTAATTTTTTTTGTTTCTCTAGAAG","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"3f8137a21b107ae368975eb126cb658792fd01796dfa19928b5921f641de727b","group_id":"a64aae3705dccf355c107dd15fb50f2d502182fdc0156a26f4998466ada9bca7","id":"ALIGN-0008990","index":8990,"input":{"a":"GCCTTCGTATTTTTTTTTTCTCTAGAAG","b":"GCCTTCGTAATTTTTTTTGTTTCTCTAGAAG","source_sequence":"GCCTTCGTATTTTTTTTTTCTCTAGAAG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCCACTTGGGNNTGCAATCATATGTGCCGCGCACGGGCACTGCC","aligned_b":"TCCACTTGGGNNTGCAACCATATGTGCCGCGCACGGGCACTGCC","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"ef81dfefa382340854d042777083de613ad2d1a9da48250b9b5127eda979f5ae","group_id":"8340e6a9dcef059f5efcdbafbafcc3c870b02b627b141beeb9d53ed8133b214a","id":"ALIGN-0009023","index":9023,"input":{"a":"TCCACTTGGGNNTGCAATCATATGTGCCGCGCACGGGCACTGCC","b":"TCCACTTGGGNNTGCAACCATATGTGCCGCGCACGGGCACTGCC","source_sequence":"TCCACTTGGGNNTGCAATCATATGTGCCGCGCACGGGCACTGCC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-C-AGCT--A-GGATCCGCTGAGCCGAGCCTAACGCATATATGCAACTAGC","aligned_b":"GCTAGTTGCATATATGCG-TTAGGCTCGGCTCA-GCGGAT-CCTAGCT-G-","edit_distance":26,"within_threshold":true},"family":"reverse_complement","fingerprint":"c5c03c4d99760d94432f3619fc9ebec3b6ee959d2966a790e830460fd8df1cbd","group_id":"3c36a66d644888308471cdce018dc87f9d92a33a73d7a853a23ef8ec95a9b604","id":"ALIGN-0009029","index":9029,"input":{"a":"CAGCTAGGATCCGCTGAGCCGAGCCTAACGCATATATGCAACTAGC","b":"GCTAGTTGCATATATGCGTTAGGCTCGGCTCAGCGGATCCTAGCTG","source_sequence":"CAGCTAGGATCCGCTGAGCCGAGCCTAACGCATATATGCAACTAGC","threshold":27},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"-G-GGT-AAC-AGTACACGTGGGCAAACGGCC-TGAGTATTAGCGCATCTCG","aligned_b":"CGAGATGCGCTAATACTC-AGGCCGTTTGCCCACGTGTACT-G-TTA-C-CC","edit_distance":28,"within_threshold":true},"family":"reverse_complement","fingerprint":"7e1d937a990826ee6cc11d6b8157b51040bb350b02aa1e6e3732ca3fe986bc12","group_id":"261b6bf7ca2d678ce8a5b9cb1e320ab95172dca00c053a7c5b82f02a178b581a","id":"ALIGN-0009039","index":9039,"input":{"a":"GGGTAACAGTACACGTGGGCAAACGGCCTGAGTATTAGCGCATCTCG","b":"CGAGATGCGCTAATACTCAGGCCGTTTGCCCACGTGTACTGTTACCC","source_sequence":"GGGTAACAGTACACGTGGGCAAACGGCCTGAGTATTAGCGCATCTCG","threshold":29},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"AACTTAGCACNNGCACCTGCATTACTTCT","aligned_b":"AACNTAGCACNNGCACCTGCATTACTTCT","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"03570ca9e391654501bca4f278f8583dce69579b9f0c891093913c0c61530f23","group_id":"0060408b90612bc8a1df291ecd5b661a8e7b8f8f3cd0b8ccfe821ae4e26593b3","id":"ALIGN-0009118","index":9118,"input":{"a":"AACTTAGCACNNGCACCTGCATTACTTCT","b":"AACNTAGCACNNGCACCTGCATTACTTCT","source_sequence":"AACTTAGCACNNGCACCTGCATTACTTCT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
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{"expected":{"aligned_a":"CAAATCCCATNNCGATATAAAGGGAT","aligned_b":"CAAATCCCATNNCGATATGAACAGGN","edit_distance":5,"within_threshold":false},"family":"literal_N","fingerprint":"f558e4e678df1974cd453230dcff01a984764cbf2d072b84cf5a8449d02d35e6","group_id":"f4ba8ff15dd7642816781e320d56991a46a05bed04a47d362051973d9a5ead1c","id":"ALIGN-0009183","index":9183,"input":{"a":"CAAATCCCATNNCGATATAAAGGGAT","b":"CAAATCCCATNNCGATATGAACAGGN","source_sequence":"CAAATCCCATNNCGATATAAAGGGAT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATGCTAGACGCAGCTGTGCCGTGAATCAC--CACA----CG-C--G-A--","aligned_b":"-----T---CGC-G-TGTG--GTGATTCACGGCACAGCTGCGTCTAGCATC","edit_distance":25,"within_threshold":true},"family":"reverse_complement","fingerprint":"5b942d8fe00dd94d525346b0b99306342cb5aa3fc0032f282704fef3c8f64a69","group_id":"ea44fb83f26940f64e93951eede52ef0c7714f852625b80aa4de24272fafab26","id":"ALIGN-0009184","index":9184,"input":{"a":"GATGCTAGACGCAGCTGTGCCGTGAATCACCACACGCGA","b":"TCGCGTGTGGTGATTCACGGCACAGCTGCGTCTAGCATC","source_sequence":"GATGCTAGACGCAGCTGTGCCGTGAATCACCACACGCGA","threshold":25},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTTTTACGACNNATGCCCGTACTG-CTGAATTATAAG-CCTGTGTCGTA","aligned_b":"GTTTTACGACNNATGCCCGTACTGACTGAA-TATAAGCCCTGTG-CGTA","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"0313fdf3bb4ebebcfd9bdc4e6ec2ff8124815ea1a21d34524570ec61bc159140","group_id":"e22fe5c5066fe1a6713bc49b9be2c9c7c14d722cf1e6b934a835bcbeb98810d6","id":"ALIGN-0009193","index":9193,"input":{"a":"GTTTTACGACNNATGCCCGTACTGCTGAATTATAAGCCTGTGTCGTA","b":"GTTTTACGACNNATGCCCGTACTGACTGAATATAAGCCCTGTGCGTA","source_sequence":"GTTTTACGACNNATGCCCGTACTGCTGAATTATAAGCCTGTGTCGTA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CAGCTGTTT-ATTATTATTATTATTATTCTTCCTGCG","aligned_b":"CAGCTGTTTCATTATTATTATTATTATTCTACCTGCG","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"90c4f90791181e178f1f5796e27e3e17a6fe82ab5314f0149cdbda28edc2bb07","group_id":"beea21bbc5112dc4e85e4c3fa4f9168338663ae6bcc0f2b6ae88fa35a970be57","id":"ALIGN-0009196","index":9196,"input":{"a":"CAGCTGTTTATTATTATTATTATTATTCTTCCTGCG","b":"CAGCTGTTTCATTATTATTATTATTATTCTACCTGCG","source_sequence":"CAGCTGTTTATTATTATTATTATTATTCTTCCTGCG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCAACAAGANNGTTCCTT--GAGCAGAAAGGTAAGTTA","aligned_b":"CTCAACAAGAGNNTTCCTTGAGAGCAGAAAGGTAAGTTA","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"248c89ccec1fdf412f55077581ef264385a713ff8c72091d1dd8326ead0fb9e7","group_id":"1e276fc78ec6d90936f4f954d022f5d45de1e968e984601c89397117fd622b3d","id":"ALIGN-0009203","index":9203,"input":{"a":"CTCAACAAGANNGTTCCTTGAGCAGAAAGGTAAGTTA","b":"CTCAACAAGAGNNTTCCTTGAGAGCAGAAAGGTAAGTTA","source_sequence":"CTCAACAAGANNGTTCCTTGAGCAGAAAGGTAAGTTA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACACTCCAAGCCCCCCCCCCCCGCGTCTC-TCC","aligned_b":"ACACTCCAACCCCCCCCCCCCCGCGTCTCGTCC","edit_distance":2,"within_threshold":true},"family":"homopolymer","fingerprint":"85384fc5d17ac3dfa703306990ac0cf5d5d235caf7c6244afe1de8412dd1de33","group_id":"e409df4f5ee81d8da916491ac4389c1df2e4031f968cb038b1c811c578f4155b","id":"ALIGN-0009205","index":9205,"input":{"a":"ACACTCCAAGCCCCCCCCCCCCGCGTCTCTCC","b":"ACACTCCAACCCCCCCCCCCCCGCGTCTCGTCC","source_sequence":"ACACTCCAAGCCCCCCCCCCCCGCGTCTCTCC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTTGCACT-TTTAACTAGTTAAGGA","aligned_b":"TCCTTAACTAGTTAA-AAGTGCAAGA","edit_distance":10,"within_threshold":false},"family":"reverse_complement","fingerprint":"79ea58715b52b434dfaa5910cd5aee1ccff5224d443d73c326e273e6ff1d6abf","group_id":"3f4055c59b7587e1d6568a12ef48151aed04ac8ea8f99b9eabc9b9c2d7649ffe","id":"ALIGN-0009239","index":9239,"input":{"a":"TCTTGCACTTTTAACTAGTTAAGGA","b":"TCCTTAACTAGTTAAAAGTGCAAGA","source_sequence":"TCTTGCACTTTTAACTAGTTAAGGA","threshold":9},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-CTCCCTCTCCGGGGGGGGGGGGGCTCGGGC-TAA","aligned_b":"TCTCCCTCTCC-GGGGGGGGGGGGCTCGGGCTTAA","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"6a32ef182104e87bc30c11cc49c27626d517f366736984122d332450d1a2760c","group_id":"e20363790146fa649ec46a5e4b67e44d6102d63751b126f43fe539a33311f90a","id":"ALIGN-0009245","index":9245,"input":{"a":"CTCCCTCTCCGGGGGGGGGGGGGCTCGGGCTAA","b":"TCTCCCTCTCCGGGGGGGGGGGGCTCGGGCTTAA","source_sequence":"CTCCCTCTCCGGGGGGGGGGGGGCTCGGGCTAA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCTATC-AATAGGAGGAGGAGGAGGGGCTTTTTA","aligned_b":"GCTATCAAATAGGAGGAGGAGGAGGGGCTTTTTA","edit_distance":1,"within_threshold":true},"family":"tandem_repeat","fingerprint":"059283eb0c4d2c88e47ad39322483c0df915ea4fa039161be2e80877dc23d82c","group_id":"13e40cebf93cf2dce2750d5870d2e217c260924a22080624d12444d2e9daa0ba","id":"ALIGN-0009256","index":9256,"input":{"a":"GCTATCAATAGGAGGAGGAGGAGGGGCTTTTTA","b":"GCTATCAAATAGGAGGAGGAGGAGGGGCTTTTTA","source_sequence":"GCTATCAATAGGAGGAGGAGGAGGGGCTTTTTA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGAAATCA-GGAGATCTATGAATACGTCGCGTAA","aligned_b":"ACGAAATCAGGGTGATCTATGAATACGTCG-GTAA","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"324453e8ffe579b1ee114aaca9d646d65df55408c4b367608da3abacb781734b","group_id":"990c09416cfd8bd64de001f3a0e80496ecab1aaf3ac2a7010b640f62e38b97dc","id":"ALIGN-0009287","index":9287,"input":{"a":"ACGAAATCAGGAGATCTATGAATACGTCGCGTAA","b":"ACGAAATCAGGGTGATCTATGAATACGTCGGTAA","source_sequence":"ACGAAATCAGGAGATCTATGAATACGTCGCGTAA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCAGTGCCTT-CCCCCC-CCCCCCCCGGTATTCAGG","aligned_b":"CCAGTGCCTTCCCCCCCACCCCCCCCGGT-TTCAGG","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"427cd19121a3b05c08e5c0f5edf2d13ccbd1a822dc53a29d42a98e797328341e","group_id":"a4c458b55f5c9af0ecd2acc22f4e8d0ece67c576d25d4d794296fc627bae4f97","id":"ALIGN-0009295","index":9295,"input":{"a":"CCAGTGCCTTCCCCCCCCCCCCCCGGTATTCAGG","b":"CCAGTGCCTTCCCCCCCACCCCCCCCGGTTTCAGG","source_sequence":"CCAGTGCCTTCCCCCCCCCCCCCCGGTATTCAGG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTGTAGCGCAAAAAAAAATTCAT-GTCA","aligned_b":"TGTGTAGCGCAAAAAAAAATTCATGGTCA","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"0b7e2d2781f22a530fde94300a2e93586f2b8d0d5809955ff79a607d4bb077d2","group_id":"c36bb425eb6dd5ab0c453ca196f79dae42186d5f36cb8ccbc9e27d1876163a79","id":"ALIGN-0009310","index":9310,"input":{"a":"TGTGTAGCGCAAAAAAAAATTCATGTCA","b":"TGTGTAGCGCAAAAAAAAATTCATGGTCA","source_sequence":"TGTGTAGCGCAAAAAAAAATTCATGTCA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGAATCTGGTAA-TAATAATAATAATAATAATCTCCCTTC","aligned_b":"-GAATCTGGTAATTAATAATAATAATAATAATCTCCCTTC","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"0d6e2bcf967c4f54e1b1d5a504d980edaa594843243a90945289b884e6f6e5f7","group_id":"8b44db99acfffd05c491cd0ed874840b9533fc4dd62fe2bc5adb412fe8758053","id":"ALIGN-0009311","index":9311,"input":{"a":"TGAATCTGGTAATAATAATAATAATAATAATCTCCCTTC","b":"GAATCTGGTAATTAATAATAATAATAATAATCTCCCTTC","source_sequence":"TGAATCTGGTAATAATAATAATAATAATAATCTCCCTTC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CACCACCTGTTTTTTTTTTGCGTGGCAA-A","aligned_b":"CACCACCTGTTTTTTTTTTGCGTGGCAATA","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"0002baef9cfcb4ec25b5637a5696aa52fd6fc3f803b893ccc21cd60231765d53","group_id":"901d8837f71dc7236a8da02329639e89c407a0b53db00721a411a0910eb83095","id":"ALIGN-0009315","index":9315,"input":{"a":"CACCACCTGTTTTTTTTTTGCGTGGCAAA","b":"CACCACCTGTTTTTTTTTTGCGTGGCAATA","source_sequence":"CACCACCTGTTTTTTTTTTGCGTGGCAAA","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTGTACTCCGAAGGTTTTAGCGGACTTAGAGGATG-TGCC","aligned_b":"CGTGTACTCCGAAGGTTTTCGCGGACTTAGAGGATGATGCC","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"59b4929d83dc718913a294f49c310ba82edf2830996c850faca6c30862350ed2","group_id":"2101cce7afd3be60357d6558bab5bc9c1289a36160130b3d8abe834cde524b9d","id":"ALIGN-0009322","index":9322,"input":{"a":"CGTGTACTCCGAAGGTTTTAGCGGACTTAGAGGATGTGCC","b":"CGTGTACTCCGAAGGTTTTCGCGGACTTAGAGGATGATGCC","source_sequence":"CGTGTACTCCGAAGGTTTTAGCGGACTTAGAGGATGTGCC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTG-TCGGCGGGTATGCGGGCTATGT","aligned_b":"CTGATCGGCGGGTATGCGGGCTATGT","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"74716727d6694573010eccf46b43fe16edfaa3274e3ac7abde728d6553e98093","group_id":"9cc863314a746bc149ed91268aa56e9ba096d2a0a60c5339e5aefa878d37eb9c","id":"ALIGN-0009327","index":9327,"input":{"a":"CTGTCGGCGGGTATGCGGGCTATGT","b":"CTGATCGGCGGGTATGCGGGCTATGT","source_sequence":"CTGTCGGCGGGTATGCGGGCTATGT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--CT-GGCGCCTGTTGAT-GAGTGGAGTATATCT","aligned_b":"AGATATACTCC-ACTCATCAACAGGCG-CCA--G","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"943a0c9b30a106a5543d2c3642048b724ccb95320cc79b746fd8af519d1b1e70","group_id":"51e375db552ff2512f09eca07e2ea3ff79336401f91d85f6f3402dbed5a0e5be","id":"ALIGN-0009339","index":9339,"input":{"a":"CTGGCGCCTGTTGATGAGTGGAGTATATCT","b":"AGATATACTCCACTCATCAACAGGCGCCAG","source_sequence":"CTGGCGCCTGTTGATGAGTGGAGTATATCT","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAGTTAATCAAAAAAAAAAGCTTGACCTT","aligned_b":"GAGTTAATCAAAAAAAAAAGCTTGACCTT","edit_distance":0,"within_threshold":true},"family":"homopolymer","fingerprint":"830cfba4be206c917b369f217f45a413671602f4643aa9de5d4d77b1e559eff0","group_id":"92c122ab45643f774cf44bf4a7d6129d15e1bf0f76d4deae7f3d6903f7dd88fa","id":"ALIGN-0009365","index":9365,"input":{"a":"GAGTTAATCAAAAAAAAAAGCTTGACCTT","b":"GAGTTAATCAAAAAAAAAAGCTTGACCTT","source_sequence":"GAGTTAATCAAAAAAAAAAGCTTGACCTT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGTTC-TTGTTAAAAAAAAAAAAATGAGGCCCCA","aligned_b":"T-TTCTTTGTTAAAAAAAAAAAAATGAGG-CCCA","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"d0964a45d9d1eab964618d0fb1d717026cb81667b1e0e537b0c1f5602e6f6c29","group_id":"c44556a3369197c381af1622e2e49565de150065b9cb0c629a1023e54cb9a15c","id":"ALIGN-0009420","index":9420,"input":{"a":"TGTTCTTGTTAAAAAAAAAAAAATGAGGCCCCA","b":"TTTCTTTGTTAAAAAAAAAAAAATGAGGCCCA","source_sequence":"TGTTCTTGTTAAAAAAAAAAAAATGAGGCCCCA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AATCGTCCTACCCCCCCCCCTGAGA-TCTCA","aligned_b":"AATTGTCCTA--CCCCCCCCTGAGAGTCTCA","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"c91223797de30e2a2f669c69e2bda03f2a3b65273cbbc7330cb4424bf21bd128","group_id":"2c7f46c12d50ec321b48f431ee507dd2db274497f8995f88b345899ba6a1d605","id":"ALIGN-0009425","index":9425,"input":{"a":"AATCGTCCTACCCCCCCCCCTGAGATCTCA","b":"AATTGTCCTACCCCCCCCTGAGAGTCTCA","source_sequence":"AATCGTCCTACCCCCCCCCCTGAGATCTCA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGGCCTAAAATTTTTTTTTTTTGCTGAACTCG","aligned_b":"AGG-CTAAATTTTTTTTTTTTTGCT-AACTCG","edit_distance":3,"within_threshold":false},"family":"homopolymer","fingerprint":"b2aeaf0861543abadc7b1aa4e8a18943df9cf40d8affaf274d80f6130a1be19a","group_id":"7b7596313bf7b5759380d73785367dcd3cf03ac0b92d86bddc0921b0c8baa0dc","id":"ALIGN-0009435","index":9435,"input":{"a":"AGGCCTAAAATTTTTTTTTTTTGCTGAACTCG","b":"AGGCTAAATTTTTTTTTTTTTGCTAACTCG","source_sequence":"AGGCCTAAAATTTTTTTTTTTTGCTGAACTCG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCGT-CGAGTGCGGCGGCGGCGGCGGCGGCGGTGACAAGC","aligned_b":"TCGTACGGGTGCGGCGGCGGCGGCGGCGGCGGTGACAACC","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"5bb7a439e3db85d95441357027a681b145dca4fd490bf4983047a5bc3d3facf0","group_id":"0a8d9ea5fdded67118f5d69219b58d6f1bab53c90c3d0e63f2f715006b41a2a6","id":"ALIGN-0009436","index":9436,"input":{"a":"TCGTCGAGTGCGGCGGCGGCGGCGGCGGCGGTGACAAGC","b":"TCGTACGGGTGCGGCGGCGGCGGCGGCGGCGGTGACAACC","source_sequence":"TCGTCGAGTGCGGCGGCGGCGGCGGCGGCGGTGACAAGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTCTTGGCGCTCGCACTGCGAATAAGCTTACGACATCTAC","aligned_b":"CTC-TGGCGCTCGCGCTGCGTATATGCTTACGACATCTAC","edit_distance":4,"within_threshold":false},"family":"clustered_indels","fingerprint":"4bc04722028f80d24461d4740527026c595a779d92369515a7bd45f67f10866d","group_id":"5206f82b2824ade002760fa743d1065b046ff94be880f8bc03c97301936be7b2","id":"ALIGN-0009442","index":9442,"input":{"a":"CTCTTGGCGCTCGCACTGCGAATAAGCTTACGACATCTAC","b":"CTCTGGCGCTCGCGCTGCGTATATGCTTACGACATCTAC","source_sequence":"CTCTTGGCGCTCGCACTGCGAATAAGCTTACGACATCTAC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCCTTTTAGACCCCCCCCCCCCACTCATGGA","aligned_b":"TCCTTTTAGA-CCCCCCCCCCCACTCATGGA","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"9c4b2670b7148c183ab79337bb2d1623c9657ac89d1e70ee6df90925717dc01a","group_id":"33151de91538fa66ad12c8d926f3a0c094fbc9bf7cef2fe5714de310b2bf2509","id":"ALIGN-0009445","index":9445,"input":{"a":"TCCTTTTAGACCCCCCCCCCCCACTCATGGA","b":"TCCTTTTAGACCCCCCCCCCCACTCATGGA","source_sequence":"TCCTTTTAGACCCCCCCCCCCCACTCATGGA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"T--TGTTGGAAGNNAGAACTGAGTTGTCCATGCTGTC","aligned_b":"TGCTGTTGGAAGNNAGAACTGAGTCGTCCATGATGTC","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"99298576492b9a6ece735129f792a9e35ee21df425931f526bd09359a24fc811","group_id":"06bf538bc02fc69fa65fe742732838f47468cd82e2e4856c7e5af74e9e30c21a","id":"ALIGN-0009458","index":9458,"input":{"a":"TTGTTGGAAGNNAGAACTGAGTTGTCCATGCTGTC","b":"TGCTGTTGGAAGNNAGAACTGAGTCGTCCATGATGTC","source_sequence":"TTGTTGGAAGNNAGAACTGAGTTGTCCATGCTGTC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATTGCTCGTGGTACCTAGCACACAAAGTACATCAAAACACATGT","aligned_b":"CATTGCTCGTGGTACCTAGCACACACAGTACATCAAAACACATGT","edit_distance":1,"within_threshold":true},"family":"clustered_indels","fingerprint":"c41324c0f056257babf88118f59947c47bd0b2daae8d41760a9301e8c5f0b312","group_id":"6cb267ff0eaab3b89d3ac7c5ba9b438e0323989b2db6238513c9b2b4b0b8c104","id":"ALIGN-0009462","index":9462,"input":{"a":"CATTGCTCGTGGTACCTAGCACACAAAGTACATCAAAACACATGT","b":"CATTGCTCGTGGTACCTAGCACACACAGTACATCAAAACACATGT","source_sequence":"CATTGCTCGTGGTACCTAGCACACAAAGTACATCAAAACACATGT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTTTTCCGAACGGGGGGTATTAACTACTTCATGCATCCTCCTCTAGAATC","aligned_b":"C-TTTCCG--TGGGGGGTATTAACTACTTCAT-CATCCTCCTCTAGAATC","edit_distance":5,"within_threshold":true},"family":"clustered_indels","fingerprint":"fac3d18853d48c6862586f7816715e3d06f1c424367292007ea6d81375ca60e0","group_id":"0d3fbdc7870bc4fde8b9dbbcbf2e30b5549b0187c418f2d3be90ad5fb43a561e","id":"ALIGN-0009467","index":9467,"input":{"a":"CTTTTCCGAACGGGGGGTATTAACTACTTCATGCATCCTCCTCTAGAATC","b":"CTTTCCGTGGGGGGTATTAACTACTTCATCATCCTCCTCTAGAATC","source_sequence":"CTTTTCCGAACGGGGGGTATTAACTACTTCATGCATCCTCCTCTAGAATC","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATAAGTGTGCAGCAGCAGCAGCAGCAGCAGGCAACTAAC","aligned_b":"ATAAGTGTGCAGCAGCAGCTGCAGCAGCAGGCAACTAAC","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"b7ab73b436882253e31945cb00173719961785a460e73cd68a23900a26642571","group_id":"27eb82eb44b7ea760c9b06b501b8452e357f5d8fe39a24e350bfeb35dd6622bc","id":"ALIGN-0009471","index":9471,"input":{"a":"ATAAGTGTGCAGCAGCAGCAGCAGCAGCAGGCAACTAAC","b":"ATAAGTGTGCAGCAGCAGCTGCAGCAGCAGGCAACTAAC","source_sequence":"ATAAGTGTGCAGCAGCAGCAGCAGCAGCAGGCAACTAAC","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACCGAGTAATNNAGCCGATCGTGGGCTTCT-C-ACGCTTTGTCAATACTG","aligned_b":"ACCGAGTAATNNAGCCGATCGNGGGCTTCTCCGACGCTTTGTCAGTACAG","edit_distance":5,"within_threshold":false},"family":"literal_N","fingerprint":"466ad32b456f6f397c6fd2e7ef3b133c9f897e217567e898f0fd65b0ed12ccd1","group_id":"f3a7fd1fd2bb52f1e85e7b8f16deb3aaf80e460e196ca478b2eedabc08fc2644","id":"ALIGN-0009473","index":9473,"input":{"a":"ACCGAGTAATNNAGCCGATCGTGGGCTTCTCACGCTTTGTCAATACTG","b":"ACCGAGTAATNNAGCCGATCGNGGGCTTCTCCGACGCTTTGTCAGTACAG","source_sequence":"ACCGAGTAATNNAGCCGATCGTGGGCTTCTCACGCTTTGTCAATACTG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCTATGTAAAAGCCTACGAAGTCTCAGAGACCGTGACAGAAAA","aligned_b":"GCTATGTAAAAGCCTACGAAGTCT-AGAGACCGTGACAGAAAA","edit_distance":1,"within_threshold":false},"family":"clustered_indels","fingerprint":"ff098f4140563928909802dfd3e3a22f0690d5ca7274dbf559eaa875ccb5651f","group_id":"4e697b03b515ef65400f792a7eb358608e0c90825d63df8be7dd85ada80b41aa","id":"ALIGN-0009482","index":9482,"input":{"a":"GCTATGTAAAAGCCTACGAAGTCTCAGAGACCGTGACAGAAAA","b":"GCTATGTAAAAGCCTACGAAGTCTAGAGACCGTGACAGAAAA","source_sequence":"GCTATGTAAAAGCCTACGAAGTCTCAGAGACCGTGACAGAAAA","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTATAGACTTTTTTTTTTTT-TTTTTTTTCTTTCTCT","aligned_b":"CTATAGACTTTTTTTTTTTTGTTTTTTTTCTTTCTCT","edit_distance":1,"within_threshold":true},"family":"homopolymer","fingerprint":"033482840cc53936aec05b45c6b60eddf513eb3741435550b569479f8485e413","group_id":"3f7d23dd080d558a6c683b8834caa8f72bc479d18aaa3c39f28b7cbd716ff126","id":"ALIGN-0009485","index":9485,"input":{"a":"CTATAGACTTTTTTTTTTTTTTTTTTTTCTTTCTCT","b":"CTATAGACTTTTTTTTTTTTGTTTTTTTTCTTTCTCT","source_sequence":"CTATAGACTTTTTTTTTTTTTTTTTTTTCTTTCTCT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTTTCCATGTTCTTCTTCTGCGC-CT-AG","aligned_b":"TTTT-CATGTTCTTCTTCTGCGCTCTCAG","edit_distance":3,"within_threshold":false},"family":"tandem_repeat","fingerprint":"622eecf49659683124f6dcb6e1d50993344a78b1c7939880d4057b0ed4de76f1","group_id":"16c1143bcbe8eea6c22954aae8beb3117e6d635ea8431c3a8adaa7f269ee487e","id":"ALIGN-0009486","index":9486,"input":{"a":"TTTTCCATGTTCTTCTTCTGCGCCTAG","b":"TTTTCATGTTCTTCTTCTGCGCTCTCAG","source_sequence":"TTTTCCATGTTCTTCTTCTGCGCCTAG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-T-GGCTATGCACAAGATTACATAAAC-TGCAAATGTCGGAT","aligned_b":"ATCCGACATTTGC-AGTTTATGTAATCTTGTGCATAGC-CA-","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"d79494166ee5b395b9141d9b96094af3e5908b62b0a51098421f855cb027664e","group_id":"ef93d16db6dd30dfe43c534377b5f1058f45c00991f6f055721e3602fef625bd","id":"ALIGN-0009489","index":9489,"input":{"a":"TGGCTATGCACAAGATTACATAAACTGCAAATGTCGGAT","b":"ATCCGACATTTGCAGTTTATGTAATCTTGTGCATAGCCA","source_sequence":"TGGCTATGCACAAGATTACATAAACTGCAAATGTCGGAT","threshold":22},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TC-CGGACCCCCTGCACGCGACGCTAAGCG-CGTAACCAGGCCTGCATAGT","aligned_b":"ACTATGCAGGCCTGGTTACG-CGCTTAGCGTCGCGTGCAGG-GGGTCCGGA","edit_distance":27,"within_threshold":true},"family":"reverse_complement","fingerprint":"431b755b5cab1968a84858cfff8ace6ad05f14ce8a2ec08f4e9ba5d0d01f4889","group_id":"c0d02a1b32f7fea926437cd07c2ae4aa062943d1a05da091eeb0082ed5cb36d6","id":"ALIGN-0009504","index":9504,"input":{"a":"TCCGGACCCCCTGCACGCGACGCTAAGCGCGTAACCAGGCCTGCATAGT","b":"ACTATGCAGGCCTGGTTACGCGCTTAGCGTCGCGTGCAGGGGGTCCGGA","source_sequence":"TCCGGACCCCCTGCACGCGACGCTAAGCGCGTAACCAGGCCTGCATAGT","threshold":28},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCGTCCCGGCCCCCCCCCCCCCCCCACTTGGTG","aligned_b":"CCGT-CCGGCCCCCCCCCCCCCCTCACTTGGTG","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"6b7114d40bc6effd887fea9c41d3890fa99a87f88bddef78c742ab2b4d97d909","group_id":"1ca361f1e3c0d53ee2fd8f675ce679878d94dbc3c3eb39c4c16fc575ba18b88b","id":"ALIGN-0009511","index":9511,"input":{"a":"CCGTCCCGGCCCCCCCCCCCCCCCCACTTGGTG","b":"CCGTCCGGCCCCCCCCCCCCCCTCACTTGGTG","source_sequence":"CCGTCCCGGCCCCCCCCCCCCCCCCACTTGGTG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCTTATTGGCCGCCGCCAGGGGGAGT","aligned_b":"AGCTTATTGG-CGCCGCCAGGGGGGGT","edit_distance":2,"within_threshold":false},"family":"tandem_repeat","fingerprint":"43d10880c3cd9f6d3a5aef3656f776e475b1cfcec01b7ccf6b0443bd4b5e19d9","group_id":"ce4e31830532dc95cbcc529d057bf99502bdbffd9211cc28d46316c52b4ca51e","id":"ALIGN-0009531","index":9531,"input":{"a":"AGCTTATTGGCCGCCGCCAGGGGGAGT","b":"AGCTTATTGGCGCCGCCAGGGGGGGT","source_sequence":"AGCTTATTGGCCGCCGCCAGGGGGAGT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGAGT-C-CCCAGGGAGAGCCGACCTACGTTCGGCGA","aligned_b":"CGGAGTCCACCCAGGGAGAGCCGACCTACGTTCGGCGA","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"b2d2ed8557a6c15d4102357cdc01c9a5fa62526d160e05f95d1654d58e984ed6","group_id":"ae4a730b2a6efabaf2fd4ee4194df3a76fe9367b6b3a56372e1b70a97668f5a7","id":"ALIGN-0009532","index":9532,"input":{"a":"CGGAGTCCCCAGGGAGAGCCGACCTACGTTCGGCGA","b":"CGGAGTCCACCCAGGGAGAGCCGACCTACGTTCGGCGA","source_sequence":"CGGAGTCCCCAGGGAGAGCCGACCTACGTTCGGCGA","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TTCTCGTCGGCTCGCCAGATCG-CCTGATG","aligned_b":"GTCTCGTCGGCTCGCCAGATCGTCCTGATG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"31e5bf54b4d9b08078ca56059e6f455fddb8446cbb556fba909524029da1dc98","group_id":"f905b095b2ca7e0a99c13953611c27e32c90b521775bd0b4c899f3b7d343a596","id":"ALIGN-0009537","index":9537,"input":{"a":"TTCTCGTCGGCTCGCCAGATCGCCTGATG","b":"GTCTCGTCGGCTCGCCAGATCGTCCTGATG","source_sequence":"TTCTCGTCGGCTCGCCAGATCGCCTGATG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-CGCACTCATGTAGTAGTAGTAGTAGTATCAACAGCA","aligned_b":"CCGCACTCATGTAGTAGTAGTAG-AGTATCAAAAGCA","edit_distance":3,"within_threshold":true},"family":"tandem_repeat","fingerprint":"d230e346ca119527e65d58979905c33f1bc0e81d2b64597c7f8dd0cb334a6dc8","group_id":"22e692270ae512e22e4826ef9c91b5d77d0ca782ed82131629ff62367b6cf1f1","id":"ALIGN-0009546","index":9546,"input":{"a":"CGCACTCATGTAGTAGTAGTAGTAGTATCAACAGCA","b":"CCGCACTCATGTAGTAGTAGTAGAGTATCAAAAGCA","source_sequence":"CGCACTCATGTAGTAGTAGTAGTAGTATCAACAGCA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AG---AAACGGAATAATCAACTTAAGCC","aligned_b":"GGCTTAAGTTGATTATTC--CGT-TTCT","edit_distance":16,"within_threshold":true},"family":"reverse_complement","fingerprint":"b478e93f52830c15670dc5942a6bc362a9d7dee532cd074df7d17c96565c1ebd","group_id":"8ebb9ed9e7013d7fd15c6ec9bca1ad2eca54f6058c0e3791e1fa9c94e594b002","id":"ALIGN-0009554","index":9554,"input":{"a":"AGAAACGGAATAATCAACTTAAGCC","b":"GGCTTAAGTTGATTATTCCGTTTCT","source_sequence":"AGAAACGGAATAATCAACTTAAGCC","threshold":16},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGAGTACTTGNNACCTTTTTGTGCGTATGGAAGGGAT","aligned_b":"CGAGTAC-TGNNACCTTTTTGTGCGTATGGAAGGGGT","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"5e61fc6661240a884879634bd62507fb64529a73f1e44324e3b2b9af8685ee34","group_id":"e6a4050fe733e484a3f58f81f7f43c075d28e27bf1ebe3926ef8814b642c6509","id":"ALIGN-0009578","index":9578,"input":{"a":"CGAGTACTTGNNACCTTTTTGTGCGTATGGAAGGGAT","b":"CGAGTACTGNNACCTTTTTGTGCGTATGGAAGGGGT","source_sequence":"CGAGTACTTGNNACCTTTTTGTGCGTATGGAAGGGAT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTTCTCAACTNNTCCCTCGGT-GGGCTT","aligned_b":"CTTCTCAACTNNTCCCTCGGTAGGGCTT","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"00fbc6c15fbbdac0ae424a4ee6471bcad3dad2310d6c4f419fbc82a2548758d0","group_id":"a7490c2f9f22b8b44b9179f7dcc06ddc5eb022bab422f57a2d2f13b1014d8880","id":"ALIGN-0009583","index":9583,"input":{"a":"CTTCTCAACTNNTCCCTCGGTGGGCTT","b":"CTTCTCAACTNNTCCCTCGGTAGGGCTT","source_sequence":"CTTCTCAACTNNTCCCTCGGTGGGCTT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CATCTGCCGGNNATGAACTTAGATGCGCTATGGTGACGGAA","aligned_b":"CATCTGCCGGNN-TGAACTTAGATGCGCTATGGTGACGGAA","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"466f0a22ddfffab751398ec1da92634f149f801facb42b090c81a57afa48bdd2","group_id":"761d9bede31cb056e960248493d7587356fb14e1b71a909ff013bfd63b99518e","id":"ALIGN-0009618","index":9618,"input":{"a":"CATCTGCCGGNNATGAACTTAGATGCGCTATGGTGACGGAA","b":"CATCTGCCGGNNTGAACTTAGATGCGCTATGGTGACGGAA","source_sequence":"CATCTGCCGGNNATGAACTTAGATGCGCTATGGTGACGGAA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCCTGGTTGCGAAGAGCGGGGTAGAGGGCCAGTCGAGGT","aligned_b":"GCCTGGTTGCGAAGAGCGGGGTAGAGGACCAGTC-AGGT","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"22fd10f385bc6414d3d50da2119eddff4ae377f0b625507eb32c3b7c52468f23","group_id":"fb7530496a3172f4e67b9b20420a8bc5039a3c0cce2eb009bc4889bdb4b7313f","id":"ALIGN-0009637","index":9637,"input":{"a":"GCCTGGTTGCGAAGAGCGGGGTAGAGGGCCAGTCGAGGT","b":"GCCTGGTTGCGAAGAGCGGGGTAGAGGACCAGTCAGGT","source_sequence":"GCCTGGTTGCGAAGAGCGGGGTAGAGGGCCAGTCGAGGT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTA-A-TCA-CGTATGACCCATGAACCTCGATTATTTGGTGCCTCTAG","aligned_b":"CTAGAGGCACCAAATAATCGAGGTTCATGGGTCA-TACGTG-AT-TAC","edit_distance":24,"within_threshold":false},"family":"reverse_complement","fingerprint":"c5ccd4f81f45058ad36a0fb0c13fec94e59f8cd7cdcfe5a099f5ea50dce40a91","group_id":"d0216c4b65cdbabe923734f0911847f9defcd5f9a7a221861a2a7713e544029c","id":"ALIGN-0009639","index":9639,"input":{"a":"GTAATCACGTATGACCCATGAACCTCGATTATTTGGTGCCTCTAG","b":"CTAGAGGCACCAAATAATCGAGGTTCATGGGTCATACGTGATTAC","source_sequence":"GTAATCACGTATGACCCATGAACCTCGATTATTTGGTGCCTCTAG","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GCATACGTCGNNTGGCCATATGCACC","aligned_b":"GCATACGTCGNNTGG-CATATGCACC","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"c03c899109e63ee7f9c94881b5fd04361872555a7e90b2273ddebf50c6e7dcab","group_id":"241aefd504b30c212ada0558f603ca501b9b12f3458441329e95a80678b1c5e5","id":"ALIGN-0009653","index":9653,"input":{"a":"GCATACGTCGNNTGGCCATATGCACC","b":"GCATACGTCGNNTGGCATATGCACC","source_sequence":"GCATACGTCGNNTGGCCATATGCACC","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGGGTGATTACCCCCCCCCCCCCCATAGTATAT","aligned_b":"CGGGTGATTACCCTCCCCCCCCCCATAGTATAT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"b89b42eb4dab9cfb07d2ab72f2aed59fbb7254c33888d41306c5f49a1d46bc77","group_id":"b515e9f9825286c248434a6d21818b88dde9af509649439b8c3432d7cd434d12","id":"ALIGN-0009655","index":9655,"input":{"a":"CGGGTGATTACCCCCCCCCCCCCCATAGTATAT","b":"CGGGTGATTACCCTCCCCCCCCCCATAGTATAT","source_sequence":"CGGGTGATTACCCCCCCCCCCCCCATAGTATAT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GATCTTATTCNNTAACGTTCTCGA","aligned_b":"GATCTTAATCNATCACGTTCTCGA","edit_distance":3,"within_threshold":true},"family":"literal_N","fingerprint":"45fa20e5e6c6ab851e885a0a112115c061fcd2e9c0c5f6b5daaa03757229117c","group_id":"7d73d8178b9f7dcaff96fb0fc1ad405b79c11688304c34cfef1b51d209c08bca","id":"ALIGN-0009663","index":9663,"input":{"a":"GATCTTATTCNNTAACGTTCTCGA","b":"GATCTTAATCNATCACGTTCTCGA","source_sequence":"GATCTTATTCNNTAACGTTCTCGA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GC-GCTGCAAGATCGATCAACCTAGTCGGGTGGT-TCCCT","aligned_b":"GCGGCTGCAAGATCGATCAACCTAGTCGGGTGGTGTCCCT","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"2c5a691e250e3c74df6f2a4e7a8418219bc0d453eb80be7c791daae1d32a3d22","group_id":"7e6945a9d4e6952ea5091e3a5e4e466f311e51db277d11c078f6ba8404767c88","id":"ALIGN-0009667","index":9667,"input":{"a":"GCGCTGCAAGATCGATCAACCTAGTCGGGTGGTTCCCT","b":"GCGGCTGCAAGATCGATCAACCTAGTCGGGTGGTGTCCCT","source_sequence":"GCGCTGCAAGATCGATCAACCTAGTCGGGTGGTTCCCT","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTAGCACGGNNGTCTGTGGCCAAATCGGCGGGAATGCCAATGTCTT","aligned_b":"CGTAGCACGGNNGTCTGTGGCCAAATCGGCGGG-ATGCCAATGTCTT","edit_distance":1,"within_threshold":false},"family":"literal_N","fingerprint":"7084905e29e006b65517c6e38021bbe58051a43d172ab01cc369a7737558e1e3","group_id":"d6db442bc63fcd156f63a7b8ce917e00ab4232480ef370563d34a009ce6fa07e","id":"ALIGN-0009688","index":9688,"input":{"a":"CGTAGCACGGNNGTCTGTGGCCAAATCGGCGGGAATGCCAATGTCTT","b":"CGTAGCACGGNNGTCTGTGGCCAAATCGGCGGGATGCCAATGTCTT","source_sequence":"CGTAGCACGGNNGTCTGTGGCCAAATCGGCGGGAATGCCAATGTCTT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"T-CGTGAGGCANNAATTACCCACGCGCACCCGGTGTCACCGGAATC","aligned_b":"TGCGTGAGGCANNAATTACCAACGCG-ACCCGGT-TCACCGGAATC","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"98d40b835e0ac2107daf0c648dc7d3402ec7cbbd9a2d8d4d7df752fe2184a06f","group_id":"a283398b8739f1ce9eec805a3fc63c236ab6f09605d42fffe19aacf5e01ddf96","id":"ALIGN-0009698","index":9698,"input":{"a":"TCGTGAGGCANNAATTACCCACGCGCACCCGGTGTCACCGGAATC","b":"TGCGTGAGGCANNAATTACCAACGCGACCCGGTTCACCGGAATC","source_sequence":"TCGTGAGGCANNAATTACCCACGCGCACCCGGTGTCACCGGAATC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAATAAT-GGGTTTTTTTTTCC-G-CTAAGTA","aligned_b":"G-ATAATCGGGTTTTTTTTTCCTGCCTAAGTA","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"8860b760016e028134371ae4e6ded23a593d96c7ae40dc8e214ef00d2b8626f9","group_id":"9dca6e5566530664ebbc3cb7063ca1eaae6bad929051e7911e7078b22e0038c7","id":"ALIGN-0009700","index":9700,"input":{"a":"GAATAATGGGTTTTTTTTTCCGCTAAGTA","b":"GATAATCGGGTTTTTTTTTCCTGCCTAAGTA","source_sequence":"GAATAATGGGTTTTTTTTTCCGCTAAGTA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AAC-GGACGTGATGATGATGATGA-TGATACGACCTGG","aligned_b":"AACGGGACGTGATGATGATGATGATTGATACGACCTGG","edit_distance":2,"within_threshold":true},"family":"tandem_repeat","fingerprint":"487828bd65fd83c4033f750742eb16fba5643d04eece0b68cb49be2005bec169","group_id":"ddfbee95ae0e8f75ba01d7ef0b60ef0f0744fe29c5c8a44ce219316ba4d26664","id":"ALIGN-0009706","index":9706,"input":{"a":"AACGGACGTGATGATGATGATGATGATACGACCTGG","b":"AACGGGACGTGATGATGATGATGATTGATACGACCTGG","source_sequence":"AACGGACGTGATGATGATGATGATGATACGACCTGG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CT-CCAACAACTTAGCAGCGATAGGTAT--TTG-TAAAATGACAGTAA","aligned_b":"TTACTGTCATTTTA-CA--AATACCTATCGCTGCTAAGTTG-TTGGAG","edit_distance":24,"within_threshold":false},"family":"reverse_complement","fingerprint":"4ed7e0064c42a3ad7800b56def1ba7e8f4668e9be1cfc0bced0fea2be69ebc73","group_id":"0e8d6a53b85084514e86123fde076ba0c1237aa9be885b8c3eeb854a5fda2d8c","id":"ALIGN-0009709","index":9709,"input":{"a":"CTCCAACAACTTAGCAGCGATAGGTATTTGTAAAATGACAGTAA","b":"TTACTGTCATTTTACAAATACCTATCGCTGCTAAGTTGTTGGAG","source_sequence":"CTCCAACAACTTAGCAGCGATAGGTATTTGTAAAATGACAGTAA","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGGACGCATAN-NT-GGTACACGCGA-TCCG","aligned_b":"GGGACGC-TANCNTCGGTACACGCGACTCCG","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"9318437f2673507ae14a5eb02f750167ff0de32bbbb79f052faad66deb967c14","group_id":"6c0eebd9fb6aca1b06e4f04d75eb3a48567b672d29ca5e3bc15f50efa77ef2a8","id":"ALIGN-0009713","index":9713,"input":{"a":"GGGACGCATANNTGGTACACGCGATCCG","b":"GGGACGCTANCNTCGGTACACGCGACTCCG","source_sequence":"GGGACGCATANNTGGTACACGCGATCCG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATGAAGGATATTTTTTTTGTGATAAGTT","aligned_b":"ATGAAGGAAATTTTTTTTGTGATAAGTT","edit_distance":1,"within_threshold":false},"family":"homopolymer","fingerprint":"d0af8f4c2730172408a2131b32207cd077aa218d526c25b1eb07eff096435a22","group_id":"5f42fdf52a6d71dc60125915076a480c5c82f90c86597cb9be507dc3efbd1529","id":"ALIGN-0009715","index":9715,"input":{"a":"ATGAAGGATATTTTTTTTGTGATAAGTT","b":"ATGAAGGAAATTTTTTTTGTGATAAGTT","source_sequence":"ATGAAGGATATTTTTTTTGTGATAAGTT","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CTTCATATATGCTGCTGCTGCTGCTGCTGCTTTGTACCT","aligned_b":"CTTCATATATACTGCTG-TGCTGCTGCTG-TTAGTACCT","edit_distance":4,"within_threshold":false},"family":"tandem_repeat","fingerprint":"70199151cb5dacdf246e254230863bfcb438affd83dbe6d9c64dc027ae91c476","group_id":"fe72f4755ea1c76fe2c2decfaaef0425ffc955788829f70b482a785b5a183745","id":"ALIGN-0009721","index":9721,"input":{"a":"CTTCATATATGCTGCTGCTGCTGCTGCTGCTTTGTACCT","b":"CTTCATATATACTGCTGTGCTGCTGCTGTTAGTACCT","source_sequence":"CTTCATATATGCTGCTGCTGCTGCTGCTGCTTTGTACCT","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GTGGATGTTCTAAAGGT-ACTCAGCATACTGTGCGCCT-ACTCCGCCT","aligned_b":"GTGGATGTTCTAAAGGTCACTCAGCATACTGTGCGCCTCACTCCGCCT","edit_distance":2,"within_threshold":false},"family":"clustered_indels","fingerprint":"9376d4e38884d95e3111e0deadd97d8fc7b21acebbc70c32a9f73ca530759bc0","group_id":"c8e0cacba6f8bcf6d4a54016dc8a8231efe9bfbca575d5015952c9e501929083","id":"ALIGN-0009742","index":9742,"input":{"a":"GTGGATGTTCTAAAGGTACTCAGCATACTGTGCGCCTACTCCGCCT","b":"GTGGATGTTCTAAAGGTCACTCAGCATACTGTGCGCCTCACTCCGCCT","source_sequence":"GTGGATGTTCTAAAGGTACTCAGCATACTGTGCGCCTACTCCGCCT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATTAACAGCCNNGCAACATCCAGGCCGGACTGTTCCGTCCCT","aligned_b":"ATTAACAGCCNNGCAACATCCA-GCCGGACTGTTCCGTCCCT","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"b341aa8d24b0b27a5bf1d1e4900ce2f90a3e63248065374745f9ef9db66b2d97","group_id":"bd587965b334b8cc942ae53b7a25ee3dd2ba5098c824cca1e25efb31c22c3f7b","id":"ALIGN-0009763","index":9763,"input":{"a":"ATTAACAGCCNNGCAACATCCAGGCCGGACTGTTCCGTCCCT","b":"ATTAACAGCCNNGCAACATCCAGCCGGACTGTTCCGTCCCT","source_sequence":"ATTAACAGCCNNGCAACATCCAGGCCGGACTGTTCCGTCCCT","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GTCAGTTCTCACTCGTTACCACAATAACGGT-ACG-GTTACTCCCGCTG","aligned_b":"CAGCGGGAGTAAC-CG-TACCGTTATTGTGGTAACGAGTGAGAACTG-AC","edit_distance":26,"within_threshold":true},"family":"reverse_complement","fingerprint":"7b029144e74e4ab4b822f2483cd06d2a8e3cce336f0c97961ec4143e8e58d7b9","group_id":"b08d386fb51a53de71fac050b3332df4c0a7076d2201f2c44acd5ca27665af4e","id":"ALIGN-0009764","index":9764,"input":{"a":"GTCAGTTCTCACTCGTTACCACAATAACGGTACGGTTACTCCCGCTG","b":"CAGCGGGAGTAACCGTACCGTTATTGTGGTAACGAGTGAGAACTGAC","source_sequence":"GTCAGTTCTCACTCGTTACCACAATAACGGTACGGTTACTCCCGCTG","threshold":26},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGTTTGGGATCGGCC-TAGATGGGTGAGTCGAATCA","aligned_b":"TGATTCGACTCACCCATCTA-GGCCGATCCCAAACT","edit_distance":18,"within_threshold":true},"family":"reverse_complement","fingerprint":"b934fbbd4cb228e48f00673aad32de16d3f8c38fcf5c59825b46a8a08c62a1ab","group_id":"f388e21da7ecc8851f5eea2cf5fc25cf91913636e314f417ce76175e1499b50c","id":"ALIGN-0009779","index":9779,"input":{"a":"AGTTTGGGATCGGCCTAGATGGGTGAGTCGAATCA","b":"TGATTCGACTCACCCATCTAGGCCGATCCCAAACT","source_sequence":"AGTTTGGGATCGGCCTAGATGGGTGAGTCGAATCA","threshold":19},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"-GGGGTAGAGCTTTTTTTTTTTTCATCCATAAT","aligned_b":"GGGGGTAGAGC-TTTTTTTTTTTCATCC-TAAT","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"fb22a2bc977995dbbf9be20236bebd6e72f840bc207dd3073f9a0a98973b512e","group_id":"6d1bac01f9ae5fd2a7fb0eb6026ce154df58444db329ba6e2752ed83d1292561","id":"ALIGN-0009780","index":9780,"input":{"a":"GGGGTAGAGCTTTTTTTTTTTTCATCCATAAT","b":"GGGGGTAGAGCTTTTTTTTTTTCATCCTAAT","source_sequence":"GGGGTAGAGCTTTTTTTTTTTTCATCCATAAT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATATTGTG-ACNNAGCCGGACGCACTCGACCCCCGTCCGGACACAC","aligned_b":"ATATTGTGAACNNAGCCGGACGCATTCGA-CCCCGTCCGGACCCAC","edit_distance":4,"within_threshold":false},"family":"literal_N","fingerprint":"a93bb7205494361835c4f795a4b415b6cff760edd32eba6608b6b45b2084c1d9","group_id":"96ac216387bb2bcaa656a005a5e28045983461e370d7015257c53bef49e2f8c4","id":"ALIGN-0009783","index":9783,"input":{"a":"ATATTGTGACNNAGCCGGACGCACTCGACCCCCGTCCGGACACAC","b":"ATATTGTGAACNNAGCCGGACGCATTCGACCCCGTCCGGACCCAC","source_sequence":"ATATTGTGACNNAGCCGGACGCACTCGACCCCCGTCCGGACACAC","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACCACCCACTAAAAAAAAAAAAAAAATTGGGAACCG","aligned_b":"AACCCCCACTGAAAAAAAAAAAAAAATTGGGCACCG","edit_distance":4,"within_threshold":false},"family":"homopolymer","fingerprint":"e48e31bd8cf7e52a41c11e4b94ca82651e8be7b23bb33a0a368bce61219c64f7","group_id":"1cb35bb5c5a9c8ea6f179926095ccfb8f18ca2c4896f6edad6edafd6597e1d98","id":"ALIGN-0009815","index":9815,"input":{"a":"ACCACCCACTAAAAAAAAAAAAAAAATTGGGAACCG","b":"AACCCCCACTGAAAAAAAAAAAAAAATTGGGCACCG","source_sequence":"ACCACCCACTAAAAAAAAAAAAAAAATTGGGAACCG","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CACCGTTGTAGACACTAGAAGTGATTT-TACGCGTAGCCCTCTCTCA","aligned_b":"CACCG-TGTAGACACTA-AAGTGATTTCTAC-CGTAGCCCTCTCTCA","edit_distance":4,"within_threshold":true},"family":"clustered_indels","fingerprint":"0e1c326cf000968363dd81554759a6907cc25656f3462b847faa22c3e32d2ebe","group_id":"62071cd360b397e23ab43d8d457c06fdcac695ef8562ba04a33a476820c4baf7","id":"ALIGN-0009822","index":9822,"input":{"a":"CACCGTTGTAGACACTAGAAGTGATTTTACGCGTAGCCCTCTCTCA","b":"CACCGTGTAGACACTAAAGTGATTTCTACCGTAGCCCTCTCTCA","source_sequence":"CACCGTTGTAGACACTAGAAGTGATTTTACGCGTAGCCCTCTCTCA","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGGAGCAGG--TTTTTTTTTTT-TTTTATGTAGACC","aligned_b":"GGGA-CAGGTTTTTTTTTTTTTATTTTATGTAGACC","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"dbf88a64c17611ffa72d4f46d4f798c118be21aeef79cb94a5131a63e54e75dc","group_id":"ddf36f4585378e22c92c311be8c41c4d32daee71e21442744fdfceeb924411b0","id":"ALIGN-0009831","index":9831,"input":{"a":"GGGAGCAGGTTTTTTTTTTTTTTTATGTAGACC","b":"GGGACAGGTTTTTTTTTTTTTATTTTATGTAGACC","source_sequence":"GGGAGCAGGTTTTTTTTTTTTTTTATGTAGACC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"--AT-AATTT-CT-GTCCAGAAAC-GAACGAGTAAAGGGACGG","aligned_b":"CCGTCCCTTTACTCGTTC-GTTTCTGGAC-AG-AAA-TTA--T","edit_distance":23,"within_threshold":true},"family":"reverse_complement","fingerprint":"b8727437d83930b687f385b7eb8699145b9a463b12425582b1a045620351aabe","group_id":"ffcdbcfb304bef7cb3efabf0a4bf5a86164d70acc3d1cc060e25b76ce12ccdf5","id":"ALIGN-0009864","index":9864,"input":{"a":"ATAATTTCTGTCCAGAAACGAACGAGTAAAGGGACGG","b":"CCGTCCCTTTACTCGTTCGTTTCTGGACAGAAATTAT","source_sequence":"ATAATTTCTGTCCAGAAACGAACGAGTAAAGGGACGG","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GAATAAAAGGCCCCCCCCCCTGGGAGCGGA","aligned_b":"GATTAAAAGG-CCCCCCCCCT-GGAGCGGA","edit_distance":3,"within_threshold":true},"family":"homopolymer","fingerprint":"ecc7fe64568095659275f954b48f74188b2a5de4e97b14628bf17c05e142e82f","group_id":"257bae05493ec7ccd28447d4bca897239ab122dee824dae90e189dd9cf94483c","id":"ALIGN-0009880","index":9880,"input":{"a":"GAATAAAAGGCCCCCCCCCCTGGGAGCGGA","b":"GATTAAAAGGCCCCCCCCCTGGAGCGGA","source_sequence":"GAATAAAAGGCCCCCCCCCCTGGGAGCGGA","threshold":3},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ATAT-CCAGGGAAGAAGA-AACCAAATAG","aligned_b":"ATATGTCAGGG-AGAAGAGAACCAAATAG","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"c22f6f1df00769ea2468e6844a24db9419f6ebf3e43839de8e323e47c009a85c","group_id":"a4749771c1177309cfdc64b8d4357e636d677c8edcec4f9a23f6909a445ea743","id":"ALIGN-0009881","index":9881,"input":{"a":"ATATCCAGGGAAGAAGAAACCAAATAG","b":"ATATGTCAGGGAGAAGAGAACCAAATAG","source_sequence":"ATATCCAGGGAAGAAGAAACCAAATAG","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"GGA-CGTTTGTNNTATTTTGTCGACGCTTATAACTGTCTCCACG","aligned_b":"GGACCGTTTGTNNTATTTTGTCGACGCTTATAACTGTCTCCACG","edit_distance":1,"within_threshold":true},"family":"literal_N","fingerprint":"c6dd0fd5b50935e76759060fc44eb218dc8db74dc0b041cdc4af16f4ec240c60","group_id":"82f18c53a92ac2de9fda588d12d375fb5a8052b3c5bac2a7e3294e357261a9a7","id":"ALIGN-0009923","index":9923,"input":{"a":"GGACGTTTGTNNTATTTTGTCGACGCTTATAACTGTCTCCACG","b":"GGACCGTTTGTNNTATTTTGTCGACGCTTATAACTGTCTCCACG","source_sequence":"GGACGTTTGTNNTATTTTGTCGACGCTTATAACTGTCTCCACG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCGCGGTCCTNNCAGGCCATATACCGTCTACAAACAATTATTA","aligned_b":"CCGCGGTCCTNNCAGGCCATATACCGTCTACAACTAATTATTA","edit_distance":2,"within_threshold":false},"family":"literal_N","fingerprint":"ead20efadd7c19007e1bb2f0137ed62c18c30a7d41ae9fbb57bb95bee6a38229","group_id":"2fbb3c19a3a5d287660ac49d77efe2dfd61682c5b7de771f1736c395eded1475","id":"ALIGN-0009928","index":9928,"input":{"a":"CCGCGGTCCTNNCAGGCCATATACCGTCTACAAACAATTATTA","b":"CCGCGGTCCTNNCAGGCCATATACCGTCTACAACTAATTATTA","source_sequence":"CCGCGGTCCTNNCAGGCCATATACCGTCTACAAACAATTATTA","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCTCTACGGATGATGATGATGA-TGATGGTCAGATAC","aligned_b":"TCTCTACGGATGTTGATGATGAGTGATGCT-AGATAC","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"f10dc47eae2876fd529975ed5d6574afb6c1f4bc31ecd9c17505eda86b881b30","group_id":"61567ae5d446dff8f6f311c4523e4ca037d2e5ad00cc1c55e3fd35f136d56128","id":"ALIGN-0009941","index":9941,"input":{"a":"TCTCTACGGATGATGATGATGATGATGGTCAGATAC","b":"TCTCTACGGATGTTGATGATGAGTGATGCTAGATAC","source_sequence":"TCTCTACGGATGATGATGATGATGATGGTCAGATAC","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TCCA-GACGCTATGGTTTTAATTACCCCTGGC","aligned_b":"TCCATGGCGCTATGCTTTTAATTACCCCTGGC","edit_distance":3,"within_threshold":true},"family":"clustered_indels","fingerprint":"7bf1e47cccee9c37c3851beb3187bd3b66f2319c634afd4bb4b42844614dec10","group_id":"86ab04afabc657169b244365fe0de200f0dd95de620f808056ae87616dbfc172","id":"ALIGN-0009942","index":9942,"input":{"a":"TCCAGACGCTATGGTTTTAATTACCCCTGGC","b":"TCCATGGCGCTATGCTTTTAATTACCCCTGGC","source_sequence":"TCCAGACGCTATGGTTTTAATTACCCCTGGC","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGAGCGAATTAAAAAAAAAAAAAGTAGTTGTG","aligned_b":"CGAGCGAATT-AAAAAATAAAAAGAAGTT-TG","edit_distance":4,"within_threshold":true},"family":"homopolymer","fingerprint":"4e8df370f683b8e98503799013f8a9d508298ab4ff53c2a35bf6284580e81263","group_id":"46c45a358b52b097fd56fdcfde4b6d7ae296d956f2db3991f09329ed191e7506","id":"ALIGN-0009945","index":9945,"input":{"a":"CGAGCGAATTAAAAAAAAAAAAAGTAGTTGTG","b":"CGAGCGAATTAAAAAATAAAAAGAAGTTTG","source_sequence":"CGAGCGAATTAAAAAAAAAAAAAGTAGTTGTG","threshold":5},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CGTTGTTATCGCCGCCGCCGCATTTAACAA","aligned_b":"C-TTGTTATCGCCGCCGCCG---TTAACAA","edit_distance":4,"within_threshold":true},"family":"tandem_repeat","fingerprint":"3ede897b8793898f0cd7c4c2e215640d6d75cc7be9be7b0c24707001d5cec864","group_id":"b23c43e5942abf319ea07adc6121c319dca6f3bf28a43cbcf9678cbdc6ca5380","id":"ALIGN-0009946","index":9946,"input":{"a":"CGTTGTTATCGCCGCCGCCGCATTTAACAA","b":"CTTGTTATCGCCGCCGCCGTTAACAA","source_sequence":"CGTTGTTATCGCCGCCGCCGCATTTAACAA","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCCGATGCCANNTCCGTCAAGGTATGACCTGGAGAAGGCTGGTGCTT","aligned_b":"-CCGATGCCANNTCCGTCAAGGTATGA-CTGTAG-AGGCTGGTGCTT","edit_distance":4,"within_threshold":true},"family":"literal_N","fingerprint":"f5871ba1f0b8960852faf2c66a4fb62d2277c996641f215422d6289624a923fc","group_id":"b5eed8bd905e661560bd7f62ae39497082195bf7080c482eee16a9fde321175c","id":"ALIGN-0009948","index":9948,"input":{"a":"CCCGATGCCANNTCCGTCAAGGTATGACCTGGAGAAGGCTGGTGCTT","b":"CCGATGCCANNTCCGTCAAGGTATGACTGTAGAGGCTGGTGCTT","source_sequence":"CCCGATGCCANNTCCGTCAAGGTATGACCTGGAGAAGGCTGGTGCTT","threshold":4},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"AGCCGCATTGATGT-AGCATT-AGAACAGTTCTCTCAAATTAG","aligned_b":"AGCCGCATTGATGTGAGCATTGAGAACAGTTCTCTCAAATTAG","edit_distance":2,"within_threshold":true},"family":"clustered_indels","fingerprint":"cb83166ce8beb96d075134c75e19ce3dddb7b03a1f12d20fbfb7d1e1789d5c6e","group_id":"2df2a43f3b2315f1707f666aca3eee38868a0d31b512e840e56949130558880d","id":"ALIGN-0009957","index":9957,"input":{"a":"AGCCGCATTGATGTAGCATTAGAACAGTTCTCTCAAATTAG","b":"AGCCGCATTGATGTGAGCATTGAGAACAGTTCTCTCAAATTAG","source_sequence":"AGCCGCATTGATGTAGCATTAGAACAGTTCTCTCAAATTAG","threshold":2},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"ACGGCCC-TCCTTTTTTTTG-GTCTATGAC","aligned_b":"AGGGCCCTTCCTTTTTTTTGTGTGTATGAG","edit_distance":5,"within_threshold":true},"family":"homopolymer","fingerprint":"ed9935a72e5dd9122cb88e124c9a2ab47952ece8a4bd4f0f4f222e14aa1359e9","group_id":"cfc5bdbf5cf77586e5aa1781d746fc67a06113834241e0ca7c4e1e33bbe669ba","id":"ALIGN-0009970","index":9970,"input":{"a":"ACGGCCCTCCTTTTTTTTGGTCTATGAC","b":"AGGGCCCTTCCTTTTTTTTGTGTGTATGAG","source_sequence":"ACGGCCCTCCTTTTTTTTGGTCTATGAC","threshold":6},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"TGA-CCGCCAG-CTGT-GTTGACCATCTATAGACT-CCGGATAA","aligned_b":"TTATCCG-GAGTCTATAGATGGTCAAC-ACAG-CTGGCGG-TCA","edit_distance":18,"within_threshold":false},"family":"reverse_complement","fingerprint":"cfbf37febce1942ad76335e7a6b3c5a12d02ef5d326d5aaaef04f143497adfa9","group_id":"db1501b7bda48cab043313034303f3916f1b969907fc8252c1c2bc41c2f85d9b","id":"ALIGN-0009984","index":9984,"input":{"a":"TGACCGCCAGCTGTGTTGACCATCTATAGACTCCGGATAA","b":"TTATCCGGAGTCTATAGATGGTCAACACAGCTGGCGGTCA","source_sequence":"TGACCGCCAGCTGTGTTGACCATCTATAGACTCCGGATAA","threshold":17},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CC-TTAGCCAACCCCCCCCCTGAACGATGG","aligned_b":"CCTTTAGCAAACCCCCCCCCTGAACGATGG","edit_distance":2,"within_threshold":false},"family":"homopolymer","fingerprint":"d4767e586898acae69b1516b4a34b53e08e596f4fdf7db918ae354a376e86efa","group_id":"a76e8c2547ec94e526aae175010570408bcbbf804a08777420cda8ab7c5a0f0b","id":"ALIGN-0009990","index":9990,"input":{"a":"CCTTAGCCAACCCCCCCCCTGAACGATGG","b":"CCTTTAGCAAACCCCCCCCCTGAACGATGG","source_sequence":"CCTTAGCCAACCCCCCCCCTGAACGATGG","threshold":1},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCGCCAACTGGTGGTGGTGGTGGTCGGGCGATG","aligned_b":"CCGCCAACTGGTGGTGGTGGTGGT-GGGCGATG","edit_distance":1,"within_threshold":false},"family":"tandem_repeat","fingerprint":"c40576b482e2e58ecc093a313e2831cd8d04f6efc0fa79b4a18fbdc55cd6fe74","group_id":"6337c837c616f83d55a6494f97c5d493a1a0b69201fce0ab3a046af015358006","id":"ALIGN-0009991","index":9991,"input":{"a":"CCGCCAACTGGTGGTGGTGGTGGTCGGGCGATG","b":"CCGCCAACTGGTGGTGGTGGTGGTGGGCGATG","source_sequence":"CCGCCAACTGGTGGTGGTGGTGGTCGGGCGATG","threshold":0},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}
{"expected":{"aligned_a":"CCCGTCTACTTACTTTGACCTTGG-C--AG-CA-TAGA-TAC","aligned_b":"---GTAT-C-TATGCTG-CCAAGGTCAAAGTAAGTAGACGGG","edit_distance":22,"within_threshold":true},"family":"reverse_complement","fingerprint":"eca6bff89a119d87da0204f87113c8b0449fb6fd8850f84e461039c6bd95a263","group_id":"1f70f5b5442a92e0626c3f13bac38edeec04e650aa81c09d213c3d625d9f033c","id":"ALIGN-0009999","index":9999,"input":{"a":"CCCGTCTACTTACTTTGACCTTGGCAGCATAGATAC","b":"GTATCTATGCTGCCAAGGTCAAAGTAAGTAGACGGG","source_sequence":"CCCGTCTACTTACTTTGACCTTGGCAGCATAGATAC","threshold":23},"provenance":{"brand":"RegalFire","contains_personal_data":false,"environment":"RegalFire align computational fixture v1","external_records":false,"label_source":"deterministic_computational_rules","license":"MIT","llm_ground_truth":false,"origin":"original_procedural_synthetic"},"seed":20261001,"split":"test"}