"""Unqualified same-run 3D-water aspiration/dispense/rack motor candidate. Advancement requires actual liquid inventory. No phase-based water creation, object pose substitution, or automatic physics qualification is performed. """ from pathlib import Path import sys,argparse,json,time,math import numpy as np,mujoco,warp as wp from scipy.spatial.transform import Rotation sys.path.insert(0,str(Path(__file__).resolve().parents[1])) from dropperlab.experimental_sph.warp_dfsph import WarpDFSPH from dropperlab.experimental_sph.bulb_fem import Cavity from dropperlab.experimental_sph.bulb_integrity import BulbIntegrity from dropperlab.dual_policy import MotorController from dropperlab.assets import ROOT from dropperlab.experiment_recording import ExperimentRecorder from dropperlab.particle_inventory import CavityInventory from dropperlab.transfer_policy import TransferPolicy from dropperlab.interval_state import IntervalState from dropperlab.accepted_checkpoint import save_checkpoint,load_checkpoint from dropperlab.grasp_support import GraspSupport from dropperlab.grasp_geometry import GraspGeometry p=argparse.ArgumentParser();p.add_argument('--source',type=Path,default=ROOT/'results/coupled_gpu_seed_smoke') p.add_argument('--out',type=Path,required=True);p.add_argument('--duration',type=float,default=60.) p.add_argument('--release-duration',type=float,default=.3);p.add_argument('--sigma',type=float,default=.072) p.add_argument('--release-gap',type=float,default=.008) p.add_argument('--fluid-dt',type=float,default=.0001) p.add_argument('--adaptive-contact',action='store_true') p.add_argument('--contact-predictor-recovery',action='store_true') p.add_argument('--paired-world-contact',action='store_true') p.add_argument('--record-water-interval',type=float,default=.02) p.add_argument('--maximum-coupling-iterations',type=int,default=24) p.add_argument('--resume',type=Path) p.add_argument('--minimum-solid-dt',type=float,default=.0000125) p.add_argument('--neighbor-cache',action='store_true') p.add_argument('--kinematics-only-prediction',action='store_true') p.add_argument('--adopt-native-result',action='store_true') p.add_argument('--gas-volume-tolerance',type=float,default=1e-11) p.add_argument('--grasp-feedback',action='store_true') p.add_argument('--transport-grasp-minimum',type=float,default=.12) p.add_argument('--bulb-center-z',type=float) p.add_argument('--stem-preclose-gap',type=float,default=.014) p.add_argument('--synchronized-motion',action='store_true') p.add_argument('--recover-solid-dt',type=float,default=0.) p.add_argument('--coupling-relaxation',type=float,default=1.) p.add_argument('--coupling-tolerance',type=float,default=5e-9) p.add_argument('--ccd-tolerance',type=float) p.add_argument('--ccd-iterations',type=int) p.add_argument('--independent-grasp-geometry',action='store_true') p.add_argument('--immersion-depth',type=float,default=.005) p.add_argument('--aspiration-timeout',type=float,default=12.) p.add_argument('--stop-request',type=Path) p.add_argument('--bimanual-stem-support',action='store_true') p.add_argument('--rack-to-rack-v1',action='store_true',help='New empty-tools dual-rack initial preparation; never reinterpret an old continuation') p.add_argument('--static-world-contact',action='store_true') p.add_argument('--world-floor-z',type=float) p.add_argument('--record-port-flux',action='store_true') p.add_argument('--substep-port-flux',action='store_true') p.add_argument('--continuous-glass-wall-table',type=Path) p.add_argument('--continuous-glass-pressure-table',type=Path) p.add_argument('--dispense-force-max',type=float,default=3.) p.add_argument('--swept-water-contact',action='store_true') p.add_argument('--continuous-floor-viscosity',action='store_true') p.add_argument('--surface-model',choices=['pair','number_density_energy','number_density_implicit'],default='pair') p.add_argument('--kernel-support',type=float,default=2.) p.add_argument('--viscosity-kernel-support',type=float) p.add_argument('--viscosity-regularization',type=float,default=.01) p.add_argument('--mirror-no-slip',action='store_true') p.add_argument('--wall-velocity-model',choices=['quadratic_mirror','adaptive_mirror'],default='quadratic_mirror') p.add_argument('--pressure-complementarity',action='store_true') p.add_argument('--pressure-tolerance',type=float,default=5e-5) p.add_argument('--maximum-pressure-iterations',type=int,default=200) p.add_argument('--number-density-area-scale',type=float,default=1.) p.add_argument('--interface-kernel-support',type=float,default=3.) p.add_argument('--discrete-interface-normalization',action='store_true') p.add_argument('--interface-epsilon',type=float,default=.05) a=p.parse_args();out=a.out.resolve();out.mkdir(parents=True,exist_ok=False);started=time.perf_counter() if a.rack_to_rack_v1 and not a.bimanual_stem_support:raise ValueError('Dual-rack V1 requires bimanual support') if not .007<=a.stem_preclose_gap<=.014:raise ValueError('Stem preclose outside reviewed clearance range') if a.world_floor_z is not None and (not a.static_world_contact or not np.isfinite(a.world_floor_z)):raise ValueError('A finite world floor requires fixed-world fluid contact') if a.continuous_floor_viscosity and a.world_floor_z is None:raise ValueError('Continuous floor viscosity requires the explicit physical floor') if a.substep_port_flux and not a.record_port_flux:raise ValueError('Substep flux requires the accepted port-flux ledger') model=mujoco.MjModel.from_binary_path(str(a.source/'solid/model.mjb'));data=mujoco.MjData(model) if not 3.<=a.dispense_force_max<=4.:raise ValueError('Dispense effort must remain within the original 4N gripper rating') if any(model.actuator('left_joint'+str(i)).forcerange[1]0 and a.fluid_dt>.25*np.sqrt(998.2*spacing**3/a.sigma): raise ValueError('Explicit interface timestep exceeds the capillary stability bound') water=WarpDFSPH(seed,meshes,sigma=a.sigma,cohesion_calibration=.2074,neighbor_cache=a.neighbor_cache, surface_model=a.surface_model,kernel_support=a.kernel_support,viscosity_kernel_support=a.viscosity_kernel_support, viscosity_regularization=a.viscosity_regularization,mirror_no_slip=a.mirror_no_slip,wall_velocity_model=a.wall_velocity_model, pressure_complementarity=a.pressure_complementarity,pressure_tolerance=a.pressure_tolerance, maximum_pressure_iterations=a.maximum_pressure_iterations,number_density_area_scale=a.number_density_area_scale,interface_kernel_support=a.interface_kernel_support,discrete_interface_normalization=a.discrete_interface_normalization,interface_epsilon=a.interface_epsilon) if a.continuous_glass_wall_table: from dropperlab.experimental_sph.continuous_wall_gpu import ContinuousGlassWall water.continuous_glass_wall=ContinuousGlassWall(water,a.continuous_glass_wall_table) if a.continuous_glass_pressure_table: from dropperlab.experimental_sph.continuous_wall_pressure import ContinuousGlassPressure water.continuous_glass_pressure=ContinuousGlassPressure(water,a.continuous_glass_pressure_table) if a.swept_water_contact: from dropperlab.experimental_sph.swept_water_contact import SweptWaterAudit water.swept_water_audit=SweptWaterAudit(water) water.port_flux=None if a.record_port_flux: from dropperlab.port_flux import PortFluxLedger initial_water=np.asarray(seed['water']);beaker_local=(initial_water-seed['body_position'][0])@seed['body_rotation'][0] initial_source=(np.linalg.norm(beaker_local[:,:2],axis=1)<=.032+1e-7)&(beaker_local[:,2]>=.002-1e-7)&(beaker_local[:,2]<=.065+1e-7) if not initial_source.all():raise RuntimeError('Initial water source is not the physical beaker; source flux cannot be invented') water.port_flux=PortFluxLedger(water.nf,water.mass,initial_source,water.device,complete_history=not bool(a.resume)) static_component_names=[] if a.static_world_contact: from dropperlab.experimental_sph.static_world_contact import StaticWorldContact,scene_mesh world_vertices,world_faces,static_component_names=scene_mesh(model,data,origin) planes=None if a.world_floor_z is None else [[np.array([0.,0.,a.world_floor_z])-origin,np.array([0.,0.,1.])]] water.static_world=StaticWorldContact(water,world_vertices,world_faces,planes=planes) if a.continuous_floor_viscosity: from dropperlab.experimental_sph.plane_viscosity import PlaneViscosity water.static_world.plane_viscosity=PlaneViscosity(water.static_world) void=np.load(ROOT/'assets/generated/tube_inventory_cavity.npz') tube_inventory=CavityInventory(water,void['vertices'].astype(np.float32),void['faces'].astype(np.int32)) policy=TransferPolicy(model,data,robots,float(void['vertices'][:,2].max())) support=GraspSupport(model,data,robots) if a.grasp_feedback else None if not .12<=a.transport_grasp_minimum<=.4:raise ValueError('Transport feedback threshold outside reviewed range') if a.transport_grasp_minimum!=.12 and support is None:raise ValueError('Transport support target requires measured grasp feedback') if support is not None:support.transport_minimum=a.transport_grasp_minimum if a.bulb_center_z is not None: if support is None or not -.01<=a.bulb_center_z<=-.003:raise ValueError('Bulb recentering requires feedback and reviewed pad target') support.bulb_center_z=a.bulb_center_z for r in robots: r.synchronized_motion=a.synchronized_motion if a.synchronized_motion:r.motion_speed=.5 recorder=ExperimentRecorder(out,spacing,a.record_water_interval,model=model) for r,name in zip(robots,['Dropper','Tube']): sr=data.site(r.arm+'_tcp').xmat.reshape(3,3);sp=data.site(r.arm+'_tcp').xpos r.held=(name,sr.T@(data.body(name).xpos-sp),sr.T@data.body(name).xmat.reshape(3,3)) if a.rack_to_rack_v1 and not a.resume: for r in robots:r.held=None dry=data.body('Dropper').xpos.copy();beaker=data.body('Beaker').xpos.copy() initial_depth=water.nf*water.volume/(np.pi*.032**2) wet=np.r_[beaker[:2],beaker[2]+.002+max(3*spacing,initial_depth-a.immersion_depth)] pred=mujoco.MjData(model);integration=np.empty(mujoco.mj_stateSize(model,mujoco.mjtState.mjSTATE_INTEGRATION));previous=np.zeros((3,6)) mujoco.mj_forward(model,pred) corrected=mujoco.MjData(model);mujoco.mj_forward(model,corrected) corrected_cavity=Cavity(model,corrected);predicted_cavity=Cavity(model,pred) prediction_state=np.empty_like(integration) sealed=False;sealed_at=None;last_plan=-1.;rows=[];states=[];report={'status':'running','task_success':False,'physics_qualified':False, 'scope':'unqualified same-run 3D-water aspiration/dispense/rack candidate; initially held objects','water_particles':water.nf,'spacing_m':spacing} report['adaptive_contact_retries']=0 report['coupling_recomputations']=0 report['rejected_solid_intervals']=0 report['initial_water_ml']=water.nf*water.volume*1e6 report['immersion_depth_below_initial_surface_m']=a.immersion_depth report['wet_tip_target_m']=wet.tolist() report['neighbor_cache']=a.neighbor_cache report['kinematics_only_prediction']=a.kinematics_only_prediction report['gas_volume_tolerance_m3']=a.gas_volume_tolerance report['grasp_feedback']=a.grasp_feedback;report['synchronized_motion']=a.synchronized_motion report['recover_solid_dt_max_s']=a.recover_solid_dt if not 0.0 else a.fluid_dt) t=float(data.time);dt=float(model.opt.timestep) previous_before=previous.copy() start=IntervalState(model,data,robots,cavity,policy) initial_logic=(sealed,sealed_at,last_plan) checkpoint=water.candidate_checkpoint() # The legacy endpoint ledger is written only after acceptance and never # needs a candidate backup. Substep measurements do need rollback. flux_snapshot=water.port_flux.snapshot() if water.port_flux is not None and a.substep_port_flux else None tip_before=data.body('Dropper').xpos.copy()-origin rotation_before=data.body('Dropper').xmat.reshape(3,3).copy() if water.port_flux is not None and not a.substep_port_flux and dt>a.fluid_dt+1e-15: raise RuntimeError('Port-flux measurement requires each accepted solid interval to contain at most one water step') sync_current() bore_ml=water.bore_volume()*1e6;tube_ml=tube_inventory.volume()*1e6 if support and a.bimanual_stem_support: support.right_object=policy.right_object;support.left_object=getattr(policy,'left_object','Dropper') grasp_ready=support.regulate(policy) if support else True vertices=data.flexvert_xpos[cavity.start:cavity.start+integrity.total_vertices] jac_start=np.linalg.det(vertices[integrity.tetrahedra[:,1:]]-vertices[integrity.tetrahedra[:,0,None]])/integrity.reference_det if policy.stage in ['dispense','supported_dispense'] or a.bimanual_stem_support: policy.regulate_dispense(float(jac_start.min()),cavity.pressure) if a.rack_to_rack_v1:policy.measured_bulb_volume_m3=cavity.volume() policy.port_colour=float(water.port_color()) active_transfer=policy.update(bore_ml,tube_ml,grasp_ready) aspiration_elapsed=t-policy.entered if a.rack_to_rack_v1 else t if not active_transfer and aspiration_elapsed>a.aspiration_timeout:raise RuntimeError('Actual 1 mL aspiration not established before timeout') if not active_transfer and t-last_plan>.02: last_plan=t;policy.command_aspiration(wet) color=water.port_color();surface=data.body('Beaker').xpos[2]+.002+water.nf*water.volume/(np.pi*.032**2) if not sealed and color>.25 and data.body('Dropper').xpos[2]1e-10:raise RuntimeError('Live solid integration differs from corrected native endpoint') if any(c.dist<-.0001 for c in data.contact):raise RuntimeError('Solid contact overlap exceeds 0.1 mm') sync_current() if water.tabletop_geometry_failures(origin):raise RuntimeError('Water/table geometry guard; stationary world-fluid contacts remain unqualified') if any(w.number for w in data.warning):raise RuntimeError('Native solid warning') if a.world_floor_z is not None: moving=(model.body_weldid[model.geom_bodyid]!=0)&(model.geom_contype!=0) if np.any(data.geom_xpos[moving,2]-model.geom_rbound[moving]<=a.world_floor_z):raise RuntimeError('Native solid approached the liquid-only ground plane; native ground collision must be modeled before continuing') vertices=data.flexvert_xpos[cavity.start:cavity.start+integrity.total_vertices] jac=np.linalg.det(vertices[integrity.tetrahedra[:,1:]]-vertices[integrity.tetrahedra[:,0,None]])/integrity.reference_det if jac.min()<.5:raise RuntimeError('FEM material guard') if water.port_flux is not None and not a.substep_port_flux: water.port_flux.advance(checkpoint[0],water.x,tip_before,rotation_before, data.body('Dropper').xpos-origin,data.body('Dropper').xmat.reshape(3,3)) if frame%33==0: geometry=integrity.check();row={'time':float(data.time),'stage':policy.stage if active_transfer else 'aspirate' if alpha>0 else 'immerse', 'bore_water_ml':water.bore_volume()*1e6,'bulb_volume_ml':cavity.volume()*1e6,'gas_pressure_pa':pressure_sum/dt, 'tube_water_ml':tube_inventory.volume()*1e6, 'velocity_max':water.maximum_speed(),'left_force_limit_n':limit,'left_grip_target_m':robots[0].grip,'port_color':color,**geometry} if grasp_geometry:row['independent_fem_jaw_overlap_m']=grasp_geometry.check(data) row.update(coupling_iterations=coupling+1,solid_endpoint_error_m=endpoint_error, gas_volume_endpoint_error_m3=volume_endpoint_error,actual_endpoint_cad_failures=geometry_failures) row.update(liquid) if water.port_flux is not None:row.update(water.port_flux.summary()) row.update(left_joint_target_rad=robots[0].target.tolist(), left_tcp_world_m=data.site('left_tcp').xpos.tolist(), dropper_world_m=data.body('Dropper').xpos.tolist(), aspiration_arm_hold=policy.aspiration_goal_set,dispense_feedback=policy.dispense_feedback) if support:row['native_grasp_normal_forces_n']=policy.contact_support if support and policy.stage in ['home','settle']: from dropperlab.seating_measurement import measured_seats row.update(measured_seats(model,support.state_view(),robots)) rows.append(row);states.append(data.qpos.copy());report['last_state']=row;report['wall_seconds']=time.perf_counter()-started if data.time-recorder.last>=a.record_water_interval-1e-10: recorder.capture(data,water.positions_numpy()+origin,water_velocity=water.velocities_numpy()) save_checkpoint(out/'accepted_checkpoint.npz',a.source/'solid/model.mjb',model,data,water,robots,cavity,policy,previous,(sealed,sealed_at,last_plan),checkpoint_parameters) (out/'progress.json').write_text(json.dumps(report,indent=2));print(json.dumps(row),flush=True) if policy.done:break if a.stop_request and a.stop_request.exists():controlled_stop=True;break if a.recover_solid_dt>0 and data.time>=next_step_recovery and coupling<4: model.opt.timestep=min(a.recover_solid_dt,2*model.opt.timestep) next_step_recovery=float(data.time)+.020 frame+=1 report['status']='completed' report['execution_complete']=policy.done if not policy.done:report.update(status='incomplete',error='Controlled stop at an accepted coupled boundary' if controlled_stop else 'Physical time limit reached before the full sequence completed') recorder.capture(data,water.positions_numpy()+origin,force=True,water_velocity=water.velocities_numpy()) save_checkpoint(out/'accepted_checkpoint.npz',a.source/'solid/model.mjb',model,data,water,robots,cavity,policy,previous,(sealed,sealed_at,last_plan),checkpoint_parameters) except Exception as e: report.update(status='failed',error=str(e));print(str(e),flush=True) if 'swept water path' in str(e) and getattr(water,'swept_water_audit',None) is not None: report['swept_failure_detail']=water.swept_water_audit.describe_failure() # An exception may occur after several liquid substeps in an unaccepted # solid interval. Persist final arrays only after rejecting that interval. if 'checkpoint' in locals(): water.reject_candidate_interval(checkpoint) if flux_snapshot is not None:water.port_flux.reject(flux_snapshot) start.reject(model,data,robots,cavity,policy);sealed,sealed_at,last_plan=initial_logic previous=previous_before report['failed_interval_rolled_back']=True sync_current() positions=np.array([data.body(name).xpos-origin for name in names]) rotations=np.array([data.body(name).xmat.reshape(3,3) for name in names]) failures=water.actual_geometry_failures(positions,rotations) report['rollback_state_cad_failures']=failures if not failures: save_checkpoint(out/'accepted_checkpoint.npz',a.source/'solid/model.mjb',model,data,water,robots,cavity,policy,previous,(sealed,sealed_at,last_plan),checkpoint_parameters) report.update(physical_seconds=float(data.time),wall_seconds=time.perf_counter()-started) report['phase_events']=policy.events if water.port_flux is not None:report.update(water.port_flux.summary()) (out/'report.json').write_text(json.dumps(report,indent=2));(out/'trajectory.json').write_text(json.dumps(rows,indent=2)) np.savez_compressed(out/'solid_states.npz',qpos=np.array(states)) np.savez_compressed(out/'final_water.npz',position=water.positions_numpy()+origin,velocity=water.velocities_numpy(),mass=water.mass) print(json.dumps({k:v for k,v in report.items() if k!='last_state'},indent=2))