"""Verify the Sawit-Weight dataset package. Two layers are checked. The as-captured layer under annotations/raw/ must still match every SHA-256 its manifests recorded. The corrected layer (annotations/labels/, annotations/trees.jsonl, data/train/metadata.jsonl) must be internally consistent and must differ from the raw layer only where a correction is declared below. python scripts/verify_dataset.py [dataset_root] """ import hashlib import json import os import sys TOL = 2e-3 # bbox_pixel and bbox_yolo agree to within this fraction of the image side # Corrections applied on top of the as-captured annotations, mirrored from the README. ADDED_BOXES = {("TANERA_303_BW_0004", 1)} # (tree, side_index) FRACTION_OVERRIDES = {"TANERA_303_BW_0003", "TANERA_303_BW_0004", "TANERA_303_BW_0005"} def sha256(path): h = hashlib.sha256() with open(path, "rb") as f: for chunk in iter(lambda: f.read(1 << 20), b""): h.update(chunk) return h.hexdigest() def read_json(path): with open(path, encoding="utf-8") as f: return json.load(f) def read_jsonl(path): with open(path, encoding="utf-8") as f: return [json.loads(line) for line in f if line.strip()] def read_label(path): with open(path, encoding="utf-8") as f: return [line.split() for line in f.read().splitlines() if line.strip()] def main(root): images = os.path.join(root, "data", "train") ann = os.path.join(root, "annotations") raw = os.path.join(ann, "raw") fail = [] def check(ok, message): if not ok: fail.append(message) trees = sorted(f[:-5] for f in os.listdir(os.path.join(raw, "trees")) if f.endswith(".json")) check(len(trees) > 0, "no tree JSON found") seen_images, seen_labels, digests = set(), set(), {} for name in trees: tree = read_json(os.path.join(raw, "trees", f"{name}.json")) manifest = read_json(os.path.join(raw, "manifests", f"{name}.json")) device = os.path.join(raw, "device_metadata", f"{name}.json") check(tree["tree_name"] == name, f"{name}: tree_name does not match filename") # Layer 1: the as-captured artifacts still hash to what the device recorded. for side in manifest["sides"]: rgb = os.path.join(images, side["rgb"]["file"]) raw_label = os.path.join(raw, "labels", side["label"]["file"]) check(os.path.exists(rgb), f"{name}: missing image {side['rgb']['file']}") check(os.path.exists(raw_label), f"{name}: missing raw label {side['label']['file']}") if os.path.exists(rgb): digest = sha256(rgb) check(digest == side["rgb"]["sha256"], f"{name}: SHA-256 mismatch {side['rgb']['file']}") check(digest not in digests, f"{name}: duplicate image content, also in {digests.get(digest)}") digests[digest] = side["rgb"]["file"] seen_images.add(side["rgb"]["file"]) if os.path.exists(raw_label): check(sha256(raw_label) == side["label"]["sha256"], f"{name}: SHA-256 mismatch {side['label']['file']}") seen_labels.add(side["label"]["file"]) check(sha256(os.path.join(raw, "trees", f"{name}.json")) == manifest["outputJson"]["sha256"], f"{name}: SHA-256 mismatch on tree JSON") check(sha256(device) == manifest["metadata"]["sha256"], f"{name}: SHA-256 mismatch on device metadata") # Layer 2: the corrected labels are the raw ones plus only the declared additions. for key, side in tree["images"].items(): raw_rows = read_label(os.path.join(raw, "labels", side["label_file"])) fixed_rows = read_label(os.path.join(ann, "labels", side["label_file"])) expected = side["bbox_count"] + (1 if (name, side["side_index"]) in ADDED_BOXES else 0) check(len(raw_rows) == side["bbox_count"], f"{name}/{key}: raw label has {len(raw_rows)} rows, bbox_count is {side['bbox_count']}") check(len(fixed_rows) == expected, f"{name}/{key}: corrected label has {len(fixed_rows)} rows, expected {expected}") for parts in fixed_rows: check(parts[0] == "0", f"{name}/{key}: class id is not 0") check(all(0.0 <= float(v) <= 1.0 for v in parts[1:]), f"{name}/{key}: bbox outside [0, 1]") for i, parts in enumerate(raw_rows): check([round(float(v), 5) for v in parts[1:]] == [round(float(v), 5) for v in fixed_rows[i][1:]], f"{name}/{key}: corrected label altered the original box {i}") # Capture set coverage. capture_set = read_json(os.path.join(raw, "capture_set.json")) check({t["treeName"] for t in capture_set["trees"]} == set(trees), "capture_set.json does not list exactly the trees present") # No orphan files. on_disk_images = {f for f in os.listdir(images) if f.lower().endswith(".jpg")} on_disk_raw = {f for f in os.listdir(os.path.join(raw, "labels")) if f.endswith(".txt")} on_disk_fixed = {f for f in os.listdir(os.path.join(ann, "labels")) if f.endswith(".txt")} check(on_disk_images == seen_images, f"orphan images: {sorted(on_disk_images ^ seen_images)}") check(on_disk_raw == seen_labels, f"orphan raw labels: {sorted(on_disk_raw ^ seen_labels)}") check(on_disk_fixed == seen_labels, f"orphan corrected labels: {sorted(on_disk_fixed ^ seen_labels)}") # metadata.jsonl agrees with the corrected labels and with itself. rows = read_jsonl(os.path.join(images, "metadata.jsonl")) check({r["file_name"] for r in rows} == seen_images, "metadata.jsonl does not cover every image") check(len(rows) == len(seen_images), "metadata.jsonl has duplicate file_name rows") for row in rows: objects = row["objects"] lengths = {len(v) for v in objects.values()} check(lengths == {row["num_bunches"]}, f"{row['file_name']}: objects lists disagree with num_bunches") label_rows = read_label(os.path.join(ann, "labels", row["file_name"][:-4] + ".txt")) check(len(label_rows) == row["num_bunches"], f"{row['file_name']}: label row count disagrees with num_bunches") for i, parts in enumerate(label_rows): check([round(float(v), 6) for v in parts[1:]] == [round(v, 6) for v in objects["bbox_yolo"][i]], f"{row['file_name']}: label row {i} disagrees with bbox_yolo") w, h = row["width"], row["height"] for i, (cx, cy, bw, bh) in enumerate(objects["bbox_yolo"]): x1, y1, x2, y2 = objects["bbox_pixel"][i] check(x1 < x2 and y1 < y2, f"{row['file_name']}: box {i} has no positive area") check(abs((x1 + x2) / 2 / w - cx) < TOL and abs((y1 + y2) / 2 / h - cy) < TOL and abs((x2 - x1) / w - bw) < TOL and abs((y2 - y1) / h - bh) < TOL, f"{row['file_name']}: box {i} pixel and yolo forms disagree") for i, frac in enumerate(objects["ripeness_fraction"]): source = objects["ripeness_fraction_source"][i] check(frac in (1, 2, 3, 4, 5), f"{row['file_name']}: ripeness_fraction {frac} outside 1-5") check(source in ("field_note", "visual_estimate"), f"{row['file_name']}: unknown ripeness_fraction_source {source}") check(source == "field_note" or row["tree_name"] in FRACTION_OVERRIDES, f"{row['file_name']}: undeclared ripeness override") for i, source in enumerate(objects["bbox_source"]): check(source in ("field", "visual_estimate"), f"{row['file_name']}: unknown bbox_source {source}") check(source == "field" or (row["tree_name"], row["side_index"]) in ADDED_BOXES, f"{row['file_name']}: undeclared added box") for note in objects["notes"]: check(note is None or "FAKSI" not in note.upper().replace("FRAKSI", ""), f"{row['file_name']}: FAKSI left unnormalised in notes") tree_rows = read_jsonl(os.path.join(ann, "trees.jsonl")) check({r["tree_name"] for r in tree_rows} == set(trees), "trees.jsonl does not cover every tree") boxes_by_tree = {} for row in rows: boxes_by_tree[row["tree_name"]] = boxes_by_tree.get(row["tree_name"], 0) + row["num_bunches"] for row in tree_rows: check(row["total_detections"] == boxes_by_tree[row["tree_name"]], f"{row['tree_name']}: total_detections disagrees with metadata.jsonl") check(len(row["bunches"]) == row["total_unique_bunches"], f"{row['tree_name']}: bunch count disagrees with total_unique_bunches") for bunch in row["bunches"]: check(len(bunch["appearances"]) == bunch["appearance_count"], f"{row['tree_name']}: appearance_count disagrees with appearances") print(f"trees {len(trees)} | images {len(seen_images)} | labels {len(seen_labels)} | " f"boxes {sum(r['num_bunches'] for r in rows)}") if fail: print(f"FAIL: {len(fail)} problem(s)") for message in fail: print(f" - {message}") return 1 print("PASS: raw SHA-256 digests hold and the corrected layer is consistent") return 0 if __name__ == "__main__": sys.exit(main(sys.argv[1] if len(sys.argv) > 1 else "."))