#!/usr/bin/env bash set -euo pipefail REPO_DIR="${REPO_DIR:-/nfs/ywang29/GmNet/journal_exp}" VENV_DIR="${VENV_DIR:-/tmp/gmnet_venv}" PYTHON_BASE="${PYTHON_BASE:-python3}" INSTALL_DEV="${INSTALL_DEV:-0}" UPGRADE_PACKAGING_TOOLS="${UPGRADE_PACKAGING_TOOLS:-0}" if [[ "${VENV_DIR}" != /tmp && "${VENV_DIR}" != /tmp/* ]]; then echo "VENV_DIR must be under /tmp so setup cannot modify the global environment" >&2 exit 2 fi if [[ ! -f "${REPO_DIR}/pyproject.toml" ]]; then echo "GmNet journal repository not found at ${REPO_DIR}" >&2 exit 1 fi if ! command -v "${PYTHON_BASE}" >/dev/null 2>&1; then echo "Python executable not found: ${PYTHON_BASE}" >&2 exit 1 fi if [[ ! -x "${VENV_DIR}/bin/python" ]]; then "${PYTHON_BASE}" -m venv --system-site-packages "${VENV_DIR}" fi PYTHON="${VENV_DIR}/bin/python" export PIP_DISABLE_PIP_VERSION_CHECK=1 if [[ "${UPGRADE_PACKAGING_TOOLS}" == 1 ]]; then "${PYTHON}" -m pip install --upgrade pip setuptools wheel fi "${PYTHON}" -m pip install -r "${REPO_DIR}/requirements-runtime.txt" if [[ "${INSTALL_DEV}" == 1 ]]; then "${PYTHON}" -m pip install -r "${REPO_DIR}/requirements-dev.txt" fi "${PYTHON}" -m pip install --no-build-isolation --editable "${REPO_DIR}" "${PYTHON}" "${REPO_DIR}/scripts/check_env.py" --strict-versions echo "Isolated GmNet environment is ready: ${VENV_DIR}" echo "Use ${PYTHON} or export VENV_DIR=${VENV_DIR} when running scripts."