"""Public WristHARBench v1.1 loading, preprocessing, and scoring contract. Author: ZipengWu. Code license: MIT. Data licenses are task-view-specific. """ from __future__ import annotations import hashlib import json from dataclasses import dataclass from pathlib import Path from typing import Any, Iterable import numpy as np import pandas as pd from datasets import Dataset, load_dataset from sklearn.metrics import f1_score REVISION = "v1.1.2" REPO_ID = "Zipeng365/WristHARBench" FULL_SCOPE = "full_task_view" PAPER_SCOPE = "paper_snapshot_20260828" MODEL_SEEDS = (42, 43, 44) FOLDS = (0, 1, 2, 3, 4) SPLIT_SEEDS = (1000, 2000, 3000, 4000, 5000) MAIN_TASK_VIEWS = ( "capture24_wearable_activity_v1", "wisdm_watch_accel_v1", "adl_wrist_accel_v1", "iuwds_wrist_accel_v1", "paal_adl_wrist_accel_v1", "handy_wrist_accel_v1", "domino_watch_accel_v1", "harmes_left_wrist_accel_v1", "harmes_right_wrist_accel_v1", "gotov_wrist_accel_v1", ) AUXILIARY_TASK_VIEWS = ( "pamap2_hand_imu_v1", "mhealth_right_lower_arm_v1", ) HARMES_LEFT = "harmes_left_wrist_accel_v1" HARMES_RIGHT = "harmes_right_wrist_accel_v1" HARMES_ENTRY = "harmes_paired_wrist_accel_v1" @dataclass(frozen=True) class FoldData: task_view_id: str fold: int split_seed: int model_seed: int scope: str revision: str train: Dataset validation: Dataset test: Dataset def config_name(task_view_id: str, scope: str) -> str: if scope not in {FULL_SCOPE, PAPER_SCOPE}: raise ValueError(f"Unknown scope: {scope}") if scope == PAPER_SCOPE and task_view_id == "capture24_wearable_activity_v1": return "capture24_wearable_activity_v1_paper_snapshot_20260828" return task_view_id def load_task( task_view_id: str, *, scope: str = PAPER_SCOPE, revision: str = REVISION, ) -> Dataset: """Load one physical task view pinned to a release tag.""" if task_view_id not in MAIN_TASK_VIEWS + AUXILIARY_TASK_VIEWS: raise ValueError(f"Unknown task view: {task_view_id}") return load_dataset( REPO_ID, name=config_name(task_view_id, scope), split="full", revision=revision, ) def split_dataset(dataset: Dataset, fold: int, split: str) -> Dataset: if fold not in FOLDS: raise ValueError(f"fold must be one of {FOLDS}") if split not in {"train", "validation", "test"}: raise ValueError("split must be train, validation, or test") column = f"fold_{fold}" return dataset.filter( lambda value: value == split, input_columns=[column], desc=f"fold {fold} {split}", ) def preprocess_signal(signal: Any) -> np.ndarray: """Registered ffill/bfill then per-series, per-channel z-normalization.""" array = np.asarray(signal, dtype=np.float64) if array.ndim != 2: raise ValueError(f"Expected [time, channel], got {array.shape}") array = pd.DataFrame(array).ffill().bfill().to_numpy(dtype=np.float64) if not np.isfinite(array).all(): raise ValueError("A sequence remains non-finite after registered imputation") mean = array.mean(axis=0, keepdims=True) std = array.std(axis=0, keepdims=True) std[std == 0.0] = 1.0 return (array - mean) / std def macro_f1(y_true: Iterable[str], y_pred: Iterable[str]) -> float: truth = np.asarray(list(y_true), dtype=object) pred = np.asarray(list(y_pred), dtype=object) if truth.shape != pred.shape or truth.ndim != 1 or not len(truth): raise ValueError(f"Prediction shape mismatch: truth={truth.shape}, pred={pred.shape}") return float(f1_score(truth, pred, average="macro")) def sha256(path: Path) -> str: digest = hashlib.sha256() with path.open("rb") as handle: for block in iter(lambda: handle.read(8 * 1024 * 1024), b""): digest.update(block) return digest.hexdigest() def aggregate_runs(run_rows: pd.DataFrame) -> pd.DataFrame: required = {"task_view_id", "fold", "model_seed", "macro_f1"} if not required.issubset(run_rows.columns): raise ValueError(f"Missing run columns: {sorted(required - set(run_rows.columns))}") duplicated = run_rows.duplicated(["task_view_id", "fold", "model_seed"]) if duplicated.any(): raise ValueError("Duplicate task/fold/model-seed run receipts") rows: list[dict[str, Any]] = [] for task in MAIN_TASK_VIEWS: if task in {HARMES_LEFT, HARMES_RIGHT}: continue values = run_rows.loc[run_rows["task_view_id"] == task, "macro_f1"] if len(values): rows.append({"dataset_id": task, "macro_f1": float(values.mean())}) left = run_rows[run_rows["task_view_id"] == HARMES_LEFT][ ["fold", "model_seed", "macro_f1"] ].rename(columns={"macro_f1": "left_macro_f1"}) right = run_rows[run_rows["task_view_id"] == HARMES_RIGHT][ ["fold", "model_seed", "macro_f1"] ].rename(columns={"macro_f1": "right_macro_f1"}) if len(left) or len(right): paired = left.merge(right, on=["fold", "model_seed"], how="outer", validate="one_to_one") if paired.isna().any().any(): raise ValueError("HARMES left/right runs are not paired by fold and model seed") rows.append( { "dataset_id": HARMES_ENTRY, "macro_f1": float( ((paired["left_macro_f1"] + paired["right_macro_f1"]) / 2.0).mean() ), } ) return pd.DataFrame(rows).sort_values("dataset_id").reset_index(drop=True) def compare_with_frozen20( dataset_scores: pd.DataFrame, *, method_id: str, frozen_scores_path: Path, ) -> tuple[pd.DataFrame, pd.DataFrame]: """Insert a complete submission into the frozen formal-20 main-track table.""" expected = { task for task in MAIN_TASK_VIEWS if task not in {HARMES_LEFT, HARMES_RIGHT} } | {HARMES_ENTRY} observed = set(dataset_scores["dataset_id"].astype(str)) if observed != expected: raise ValueError(f"Strict main track is incomplete: missing={sorted(expected-observed)}") frozen = pd.read_csv(frozen_scores_path) if method_id in set(frozen["method_id"].astype(str)): raise ValueError(f"Submission method_id collides with a frozen method: {method_id}") submission = dataset_scores.assign(method_id=method_id) combined = pd.concat( [frozen[["method_id", "dataset_id", "macro_f1"]], submission], ignore_index=True, ) combined["dataset_rank"] = combined.groupby("dataset_id")["macro_f1"].rank( method="min", ascending=False ) ranking = ( combined.groupby("method_id", as_index=False) .agg( mean_dataset_rank=("dataset_rank", "mean"), mean_macro_f1=("macro_f1", "mean"), dataset_wins=("dataset_rank", lambda values: int((values == 1).sum())), dataset_top3=("dataset_rank", lambda values: int((values <= 3).sum())), datasets=("dataset_id", "nunique"), ) .sort_values( ["mean_dataset_rank", "mean_macro_f1", "method_id"], ascending=[True, False, True], ) .reset_index(drop=True) ) ranking["rank_with_submission"] = np.arange(1, len(ranking) + 1) return combined, ranking def write_json(path: Path, payload: dict[str, Any]) -> None: path.parent.mkdir(parents=True, exist_ok=True) path.write_text(json.dumps(payload, indent=2, sort_keys=True) + "\n", encoding="utf-8")