diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:11509/30f4eaabc7f3caab312b0542d874b6a0400d0fccf980ac47386b031c472c9722/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:11509/30f4eaabc7f3caab312b0542d874b6a0400d0fccf980ac47386b031c472c9722/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..52d3bc9b6a4d4e26730b7e37d4ab35c37ae4570a --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:11509/30f4eaabc7f3caab312b0542d874b6a0400d0fccf980ac47386b031c472c9722/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:52.171344+00:00", + "files": { + "tensors.safetensors": "777aeecb1e19d9d7cdc832b7c091bf764ffb6a6e36253a311123f638b04962e3" + }, + "metadata": { + "created_at": "2026-08-03 02:44:53 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:11509", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "30f4eaabc7f3caab312b0542d874b6a0400d0fccf980ac47386b031c472c9722", + "protein_id": "dynamicmpnn:train:single_chain:11509", + "sequence_sha256": "30f4eaabc7f3caab312b0542d874b6a0400d0fccf980ac47386b031c472c9722", + "shape": [ + 309, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:11509", + "requested_modalities": [ + "single" + ], + "sequence": "XQVPKLNTKDLLTLEELTQEEIISLIEFAIYLKKNKQEPLLQGKILGLIFDKHSTRTRVSFEAGMVQLGGHGMFLNGKEMQMQRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIYEETNTFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDGPQSIVFEQAGNRLHAQKALLVSLFKNX", + "sequence_sha256": "30f4eaabc7f3caab312b0542d874b6a0400d0fccf980ac47386b031c472c9722" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 309, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:11703/5146e1f443379b81d979ae98af934c24155448e6a858b47843317f8ffc7db018/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:11703/5146e1f443379b81d979ae98af934c24155448e6a858b47843317f8ffc7db018/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..7b521cc8c6e3e119b8976e5e9e3e6dd389a101c5 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:11703/5146e1f443379b81d979ae98af934c24155448e6a858b47843317f8ffc7db018/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:54.421511+00:00", + "files": { + "tensors.safetensors": "76b996121fd1c7088278cd70d5607e0bc108d89a56ca10df3681ad800016337f" + }, + "metadata": { + "created_at": "2026-08-03 03:10:47 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:11703", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "5146e1f443379b81d979ae98af934c24155448e6a858b47843317f8ffc7db018", + "protein_id": "dynamicmpnn:train:single_chain:11703", + "sequence_sha256": "5146e1f443379b81d979ae98af934c24155448e6a858b47843317f8ffc7db018", + "shape": [ + 408, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:11703", + "requested_modalities": [ + "single" + ], + "sequence": "STPELRKTWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEXXAHFNEDVLMELLEQCADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLYDTLHRAYSKVTEVMHSGRRLLGTYFRVAFFGQGFFEDEDGKEYIYKEPKLTPLSEISQRLLKLYSDKFGSENVKMIQDSGKVNPKDLDSKYAYIQVTHVIPFFDEKELQERKTEFERSHNIRRFMFEMPFTQTGKRQGGVEEQCKRRTILTAIHCFPYVKKRIPVMYQHHTDLNPIEVAIDEMSKKVAELRQLCSSAEVDMIKLQLKLQGSVSVQVNAGPLAYARAFLDDPDNKVKLLKEVFRQFVEACGQALAVNERLIKEDQLEYQEEMKANYREMAKELSEIMHEQL", + "sequence_sha256": "5146e1f443379b81d979ae98af934c24155448e6a858b47843317f8ffc7db018" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 408, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:12175/7b070be19d751c07489769e3ac83db270bc23d57d41f37fb1856df88d9a84cf1/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:12175/7b070be19d751c07489769e3ac83db270bc23d57d41f37fb1856df88d9a84cf1/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..2dee7c692d3cac70f81004be8a64775d780e3519 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:12175/7b070be19d751c07489769e3ac83db270bc23d57d41f37fb1856df88d9a84cf1/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:57.337099+00:00", + "files": { + "tensors.safetensors": "5b408bf150a11b7ca8ab93e433286903ae98acbbab1a62f7fe1f4638e80607b4" + }, + "metadata": { + "created_at": "2026-08-03 03:46:21 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:12175", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "7b070be19d751c07489769e3ac83db270bc23d57d41f37fb1856df88d9a84cf1", + "protein_id": "dynamicmpnn:train:single_chain:12175", + "sequence_sha256": "7b070be19d751c07489769e3ac83db270bc23d57d41f37fb1856df88d9a84cf1", + "shape": [ + 441, + 1024 + ], + "split": "test" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:12175", + "requested_modalities": [ + "single" + ], + "sequence": "XSMSNVKQQTAQIVDWLSSTLGKDHQYREDSLSLTANENYPSALVRLTSGSTAGAFYHCSFPFEVPAGEWHFPEPGHMNAIADQVRDLGKTLIGAQAFDWRPNGGSTAEQALMLAACKPGEGFVHFAHRDGGHFALESLAQKMGIEIFHLPVNPTSLLIDVAKLDEMVRRNPHIRIVILDQSFKLRWQPLAEIRSVLPDSCTLTYDMSHDGGLIMGGVFDSPLSCGADIVHGNTHTIPGPQKGYIGFKSAQHPLLVDTSLWVCPHLQSNCHAEQLPPMWVAFKEMELFGRDYAAQIVSNAKTLARHLHELGLDVTGESFGFTQTHQVHFAVGDLQKALDLCVNSLHAGGIRSTNIEIPGKPGVHGIRLGVQAMTRRGMKEKDFEVVARFIADLYFKKTEPAKVAQQIKEFLQAFPLAPLAYSFDNYLDEELLAAVYQGAQR", + "sequence_sha256": "7b070be19d751c07489769e3ac83db270bc23d57d41f37fb1856df88d9a84cf1" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 441, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:1600/108f9401b4b9aa1747239531d858b4e1710c10f2aba177e3dee4b365a63c9b66/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:1600/108f9401b4b9aa1747239531d858b4e1710c10f2aba177e3dee4b365a63c9b66/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..9000cb8e99382463c4c80201f43438c4641311cd --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:1600/108f9401b4b9aa1747239531d858b4e1710c10f2aba177e3dee4b365a63c9b66/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:49.714518+00:00", + "files": { + "tensors.safetensors": "f559455e8f83f6d7343ad5b2c8e40de0677e9ee78f389aece9688d7ea6cf48fa" + }, + "metadata": { + "created_at": "2026-08-03 02:17:14 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:1600", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "108f9401b4b9aa1747239531d858b4e1710c10f2aba177e3dee4b365a63c9b66", + "protein_id": "dynamicmpnn:train:single_chain:1600", + "sequence_sha256": "108f9401b4b9aa1747239531d858b4e1710c10f2aba177e3dee4b365a63c9b66", + "shape": [ + 76, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:1600", + "requested_modalities": [ + "single" + ], + "sequence": "PLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLRG", + "sequence_sha256": "108f9401b4b9aa1747239531d858b4e1710c10f2aba177e3dee4b365a63c9b66" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 76, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:1696/d9ccd02bd246aacdb33329147a3260da4fa85002815a4b016d342d81edaf17a5/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:1696/d9ccd02bd246aacdb33329147a3260da4fa85002815a4b016d342d81edaf17a5/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..f55a5e0db941b3a8edb57a8dd056f07cd5c95081 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:1696/d9ccd02bd246aacdb33329147a3260da4fa85002815a4b016d342d81edaf17a5/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:04.046132+00:00", + "files": { + "tensors.safetensors": "28638ff72e2102e1cf64f1bd3b8ad117ea489c56a6201ecfae1e3a074b8dca0f" + }, + "metadata": { + "created_at": "2026-08-03 05:07:23 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:1696", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "d9ccd02bd246aacdb33329147a3260da4fa85002815a4b016d342d81edaf17a5", + "protein_id": "dynamicmpnn:train:single_chain:1696", + "sequence_sha256": "d9ccd02bd246aacdb33329147a3260da4fa85002815a4b016d342d81edaf17a5", + "shape": [ + 77, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:1696", + "requested_modalities": [ + "single" + ], + "sequence": "NPNQELGVVQCLCRRIAPLTQPPFGVRCRATLNCPCDYIGDCPGPAEQYMYRCPNCGPRSHVACSGVHQGTCQQVHP", + "sequence_sha256": "d9ccd02bd246aacdb33329147a3260da4fa85002815a4b016d342d81edaf17a5" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 77, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:19331/049ea8c723a09978c20896b57f21bd7214601e1be1165969e6488c2844ab902c/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:19331/049ea8c723a09978c20896b57f21bd7214601e1be1165969e6488c2844ab902c/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..f1e7d0f1c252a2be9eeda35290725a54fd781bc1 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:19331/049ea8c723a09978c20896b57f21bd7214601e1be1165969e6488c2844ab902c/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:48.986079+00:00", + "files": { + "tensors.safetensors": "8392305fd538fa74e7b683729177050d25f021954435c029cb5009f05b42d105" + }, + "metadata": { + "created_at": "2026-08-03 02:07:40 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:19331", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "049ea8c723a09978c20896b57f21bd7214601e1be1165969e6488c2844ab902c", + "protein_id": "dynamicmpnn:train:single_chain:19331", + "sequence_sha256": "049ea8c723a09978c20896b57f21bd7214601e1be1165969e6488c2844ab902c", + "shape": [ + 132, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:19331", + "requested_modalities": [ + "single" + ], + "sequence": "KIIYPNDLAKKMTKPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGKEPLVLKGGLSSFKQNHENLCDNSKE", + "sequence_sha256": "049ea8c723a09978c20896b57f21bd7214601e1be1165969e6488c2844ab902c" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 132, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:20813/1df1c84746d3f2d8e4edc5f6541550a036a88c3d0ff020128293b2d5811406f6/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:20813/1df1c84746d3f2d8e4edc5f6541550a036a88c3d0ff020128293b2d5811406f6/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..988281c74dd740cc68447fcfa5ee023109ffa342 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:20813/1df1c84746d3f2d8e4edc5f6541550a036a88c3d0ff020128293b2d5811406f6/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:50.677108+00:00", + "files": { + "tensors.safetensors": "1f8c5121b8c04b6535f67395f4511ac1ea8df5a304bb396e9a346a42047081f2" + }, + "metadata": { + "created_at": "2026-08-03 02:27:33 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:20813", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "1df1c84746d3f2d8e4edc5f6541550a036a88c3d0ff020128293b2d5811406f6", + "protein_id": "dynamicmpnn:train:single_chain:20813", + "sequence_sha256": "1df1c84746d3f2d8e4edc5f6541550a036a88c3d0ff020128293b2d5811406f6", + "shape": [ + 418, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:20813", + "requested_modalities": [ + "single" + ], + "sequence": "MGYQKIQVPATGDKITVNADMSLSVPKNPIIPFIEGDGIGVDISPVMIKVVDAAVEKAYKGERKIAWMEVYAGEKATQVYDQDTWLPQETLDAVRDYVVSIKGPLTTPVGGGIRSLNVALRQQLDLYVCQRPVRWFEGVPSPVKKPGDVDMVIFRENSEDIYAGVEWKAGSPEAEKVIKFLTEEMGVKKIRFTENCGIGIKPVSQEGTKRLVRKALQYAVDNDRSSVTLVHKGNIMKFTEGAFKDWGYEVARDEFGAELLDGGPWMQFKNPKTGKNVVVKDVIADAMLQQILLRPAEYDVIATLNLNGDYLSDALAAEVGGIGIAPGANLSDSVAMFEATHGTAPKYAGQDKVNPGSLILSAEMMLRHMGWTEAADLIIKGTNGAIAAKTVTYDFERLMDGATLLSCSEFGDAMIAKM", + "sequence_sha256": "1df1c84746d3f2d8e4edc5f6541550a036a88c3d0ff020128293b2d5811406f6" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 418, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:22979/8893280a3bdd86a93beae5d28ee53f529891307596f0e1d3afc5cf5c77153ea6/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:22979/8893280a3bdd86a93beae5d28ee53f529891307596f0e1d3afc5cf5c77153ea6/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..735131721b411379dec84a4286400f52dfb1e7b3 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:22979/8893280a3bdd86a93beae5d28ee53f529891307596f0e1d3afc5cf5c77153ea6/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:58.314621+00:00", + "files": { + "tensors.safetensors": "7bb376fe35e7d70746bdfb187597feb4b8edc132b784a7a36c451e4e4e709525" + }, + "metadata": { + "created_at": "2026-08-03 03:58:52 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:22979", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "8893280a3bdd86a93beae5d28ee53f529891307596f0e1d3afc5cf5c77153ea6", + "protein_id": "dynamicmpnn:train:single_chain:22979", + "sequence_sha256": "8893280a3bdd86a93beae5d28ee53f529891307596f0e1d3afc5cf5c77153ea6", + "shape": [ + 318, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:22979", + "requested_modalities": [ + "single" + ], + "sequence": "GSHMTYPTNLEIIGGQGGSSFSFTGENNGASLEKIWVWVGGWQIKAVRAWLSDGRDETFGVPSGSHQEYVFTPGECFTSLSLWGNGAGTRLGAIKFKTNKGGEFFAHMTSWGLKTEYPMDVGSGYCLGIVGRGGSDIDCMGFMFLNAVQSTVLTNVNYPTINQLIPKVATEEIKSVSFENKTSVKQEQKVETSKKVIKTSSWSMTKSFSSTFSVEVSAGIPEIAEVSTGFSISFGVESTHSLEQTDEKNETLTTTVEVPPKKKVDVHITIGRASFDLPYTGTVKITCKNGSVLQYETKGQYKGVAYTDIKVNTVEKDL", + "sequence_sha256": "8893280a3bdd86a93beae5d28ee53f529891307596f0e1d3afc5cf5c77153ea6" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 318, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:23858/99574a6b305efe4188fb9d288d123de15a2d3eb54c0002819c09f48f66eee8bb/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:23858/99574a6b305efe4188fb9d288d123de15a2d3eb54c0002819c09f48f66eee8bb/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..966206c9dffa96e0de48b2f6730b5b7b15fd6f9f --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:23858/99574a6b305efe4188fb9d288d123de15a2d3eb54c0002819c09f48f66eee8bb/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:59.276732+00:00", + "files": { + "tensors.safetensors": "14c74437a0c41197554d4fe9ca2e8ab3e059deb5f22f0a2fd413c3923fd2bd10" + }, + "metadata": { + "created_at": "2026-08-03 04:09:29 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:23858", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "99574a6b305efe4188fb9d288d123de15a2d3eb54c0002819c09f48f66eee8bb", + "protein_id": "dynamicmpnn:train:single_chain:23858", + "sequence_sha256": "99574a6b305efe4188fb9d288d123de15a2d3eb54c0002819c09f48f66eee8bb", + "shape": [ + 106, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:23858", + "requested_modalities": [ + "single" + ], + "sequence": "PYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPW", + "sequence_sha256": "99574a6b305efe4188fb9d288d123de15a2d3eb54c0002819c09f48f66eee8bb" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 106, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:25732/ac70d92fd26d446040eb772884d538b2f859dbc2a4d9565c9c748d36202af28d/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:25732/ac70d92fd26d446040eb772884d538b2f859dbc2a4d9565c9c748d36202af28d/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..449b3c3d94edf8eccbf8a886c881d74eb26ab72d --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:25732/ac70d92fd26d446040eb772884d538b2f859dbc2a4d9565c9c748d36202af28d/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:00.745227+00:00", + "files": { + "tensors.safetensors": "06e518c068b23cd09060211b45edce4adc62ec9559c6d5092c3a9bf9951b876c" + }, + "metadata": { + "created_at": "2026-08-03 04:31:28 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:25732", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "ac70d92fd26d446040eb772884d538b2f859dbc2a4d9565c9c748d36202af28d", + "protein_id": "dynamicmpnn:train:single_chain:25732", + "sequence_sha256": "ac70d92fd26d446040eb772884d538b2f859dbc2a4d9565c9c748d36202af28d", + "shape": [ + 99, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:25732", + "requested_modalities": [ + "single" + ], + "sequence": "SFLPAAELEETPEALLLKVELPGMDPKDIDVQVTAEAVSISGERKSETKTETEGMKRTEFRYGKFQRVIPLPVRIQNTSVKAEYKDGILHLTLPKAEEE", + "sequence_sha256": "ac70d92fd26d446040eb772884d538b2f859dbc2a4d9565c9c748d36202af28d" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 99, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:26172/4791993bdf37ac22b98613091be6b113ac14c337c2882ea0b2aea7d3420e65c1/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:26172/4791993bdf37ac22b98613091be6b113ac14c337c2882ea0b2aea7d3420e65c1/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..aacba25989e9614c75ae4e8919d8a448bd359438 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:26172/4791993bdf37ac22b98613091be6b113ac14c337c2882ea0b2aea7d3420e65c1/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:53.860057+00:00", + "files": { + "tensors.safetensors": "f37b0c9ac44a577f19bf3b428ab6a692b06a300ca59dabd9e39def62ecb6c545" + }, + "metadata": { + "created_at": "2026-08-03 03:04:12 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:26172", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "4791993bdf37ac22b98613091be6b113ac14c337c2882ea0b2aea7d3420e65c1", + "protein_id": "dynamicmpnn:train:single_chain:26172", + "sequence_sha256": "4791993bdf37ac22b98613091be6b113ac14c337c2882ea0b2aea7d3420e65c1", + "shape": [ + 169, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:26172", + "requested_modalities": [ + "single" + ], + "sequence": "AKKVNSEFLTLTYGALVTQMLRDFENAEDVNKQLERIGYNMGMRLIEDFLARTSAPRCLEMRETADRIQQAFRIYLNIQPTISNWSPASDEFSLVFDSNPLTEFVELPPDLTNLRYSAILSGCIRGALEMVQLEVQCWFVQDQLKGDNVTELRVKFVRRLEEVIPAGED", + "sequence_sha256": "4791993bdf37ac22b98613091be6b113ac14c337c2882ea0b2aea7d3420e65c1" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 169, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:27000/7f89e855e1d3416823cae9fcd4368f3ccc2ee1991d3894a4f592cfe6de133c6b/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:27000/7f89e855e1d3416823cae9fcd4368f3ccc2ee1991d3894a4f592cfe6de133c6b/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..b351a8ce430d2ae027be5a0141d4981642a9fb1d --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:27000/7f89e855e1d3416823cae9fcd4368f3ccc2ee1991d3894a4f592cfe6de133c6b/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:57.694768+00:00", + "files": { + "tensors.safetensors": "8aa516ba8cad7a6b075f0ad00f3cf3463de55ce8d34cdd84f058894b5cd6b469" + }, + "metadata": { + "created_at": "2026-08-03 03:52:46 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:27000", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "7f89e855e1d3416823cae9fcd4368f3ccc2ee1991d3894a4f592cfe6de133c6b", + "protein_id": "dynamicmpnn:train:single_chain:27000", + "sequence_sha256": "7f89e855e1d3416823cae9fcd4368f3ccc2ee1991d3894a4f592cfe6de133c6b", + "shape": [ + 95, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:27000", + "requested_modalities": [ + "single" + ], + "sequence": "ECCTSRELVEFKMDRGDCEAVRAIENYPNGCEVTICADGVAQLGAYCGQGPCNIFGCNCDGGCLSGDWSQEFVRRNQQYGIQIIKVTRLPFWRPL", + "sequence_sha256": "7f89e855e1d3416823cae9fcd4368f3ccc2ee1991d3894a4f592cfe6de133c6b" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 95, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:29798/01f0c90a808a5c74cba5bdeb07c03bdfcf64e7c4a91f00694f9c972baaada1d3/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:29798/01f0c90a808a5c74cba5bdeb07c03bdfcf64e7c4a91f00694f9c972baaada1d3/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..e64a3c4e325f515521824db3ba0b9822d0f64bbf --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:29798/01f0c90a808a5c74cba5bdeb07c03bdfcf64e7c4a91f00694f9c972baaada1d3/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:48.842235+00:00", + "files": { + "tensors.safetensors": "1d356447fd682f516c9197d1e6f8cffa9496e2425b2746cd21656b4bee028b22" + }, + "metadata": { + "created_at": "2026-08-03 02:05:35 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:29798", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "01f0c90a808a5c74cba5bdeb07c03bdfcf64e7c4a91f00694f9c972baaada1d3", + "protein_id": "dynamicmpnn:train:single_chain:29798", + "sequence_sha256": "01f0c90a808a5c74cba5bdeb07c03bdfcf64e7c4a91f00694f9c972baaada1d3", + "shape": [ + 94, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:29798", + "requested_modalities": [ + "single" + ], + "sequence": "RLIHVSRCEMGTSTHRCWPRPCDTSSDEPISFWPPFENTPNVIVSFGMLDVDNSNNLRVNSSADDVTVGGFTLHYNSWYTTTVWNYKLIWIACD", + "sequence_sha256": "01f0c90a808a5c74cba5bdeb07c03bdfcf64e7c4a91f00694f9c972baaada1d3" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 94, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:30043/eb4fedbd45b3c883cc5b112d4a3e78c716af430b1562e3393c67fe9f40bc462a/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:30043/eb4fedbd45b3c883cc5b112d4a3e78c716af430b1562e3393c67fe9f40bc462a/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..aa07bf0baaafacf42c67937c041e87edbbaabeab --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:30043/eb4fedbd45b3c883cc5b112d4a3e78c716af430b1562e3393c67fe9f40bc462a/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:05.404288+00:00", + "files": { + "tensors.safetensors": "3b69dff7e34932a0bcdcdc74ec5a8012240db7c229cf8534906c9cad250aedfd" + }, + "metadata": { + "created_at": "2026-08-03 05:17:16 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:30043", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "eb4fedbd45b3c883cc5b112d4a3e78c716af430b1562e3393c67fe9f40bc462a", + "protein_id": "dynamicmpnn:train:single_chain:30043", + "sequence_sha256": "eb4fedbd45b3c883cc5b112d4a3e78c716af430b1562e3393c67fe9f40bc462a", + "shape": [ + 121, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:30043", + "requested_modalities": [ + "single" + ], + "sequence": "XGTCVNTNSQITANSQCVKSTATNCYIDNSQLVDTSICTRSQYSDANVKKSVTTDCNIDKSQVYLTTCTGSQYNGIYIRSSTTTGTSISGPGCSISTCTITRGVATPAAACKISGCSLSAM", + "sequence_sha256": "eb4fedbd45b3c883cc5b112d4a3e78c716af430b1562e3393c67fe9f40bc462a" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 121, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:30225/e222531363a99fc66c3af3ea56c96e84ac161039567e3190abbb66726cdab39d/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:30225/e222531363a99fc66c3af3ea56c96e84ac161039567e3190abbb66726cdab39d/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..c6ed9e65c666b58ac457413a564e9aeb5c65328f --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:30225/e222531363a99fc66c3af3ea56c96e84ac161039567e3190abbb66726cdab39d/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:04.799116+00:00", + "files": { + "tensors.safetensors": "c8e33eacd3e3da88d1136b585df5fd427ce7fc80e409dc4b936f31d1c45255ea" + }, + "metadata": { + "created_at": "2026-08-03 05:13:13 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:30225", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "e222531363a99fc66c3af3ea56c96e84ac161039567e3190abbb66726cdab39d", + "protein_id": "dynamicmpnn:train:single_chain:30225", + "sequence_sha256": "e222531363a99fc66c3af3ea56c96e84ac161039567e3190abbb66726cdab39d", + "shape": [ + 124, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:30225", + "requested_modalities": [ + "single" + ], + "sequence": "TRRRTLYRGDPGMWSWVLHRITGATIFFFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEIGLVAAVLFHALNGIRVILIDFWAKGPRYQRQMLAVIAGLFLVIFIAAVGVIGMHMVERFX", + "sequence_sha256": "e222531363a99fc66c3af3ea56c96e84ac161039567e3190abbb66726cdab39d" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 124, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:31303/bb1a5e19a273c83ad44b702f6793602a585f99ca27dd15af2c44b68b3af74965/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:31303/bb1a5e19a273c83ad44b702f6793602a585f99ca27dd15af2c44b68b3af74965/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..ea650e06a390da7c17163b7b876ff4bfaa425a1d --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:31303/bb1a5e19a273c83ad44b702f6793602a585f99ca27dd15af2c44b68b3af74965/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:01.784894+00:00", + "files": { + "tensors.safetensors": "53e344741420e6098fe8ec9eb2368fe0cc6ecb26cef35fc004c8d74b9c570a30" + }, + "metadata": { + "created_at": "2026-08-03 04:42:13 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:31303", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "bb1a5e19a273c83ad44b702f6793602a585f99ca27dd15af2c44b68b3af74965", + "protein_id": "dynamicmpnn:train:single_chain:31303", + "sequence_sha256": "bb1a5e19a273c83ad44b702f6793602a585f99ca27dd15af2c44b68b3af74965", + "shape": [ + 73, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:31303", + "requested_modalities": [ + "single" + ], + "sequence": "ASEPRAEDGHAHDYVNEAADASGHPRYQEGQLCENCAFWGEAVQDGWGRCTHPDFDEVLVKAEGWCSVYAPAS", + "sequence_sha256": "bb1a5e19a273c83ad44b702f6793602a585f99ca27dd15af2c44b68b3af74965" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 73, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:31392/a40d6ff455bbc7d33be2828893ce395441e792c6ffb9df2f959106d62cb29f5a/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:31392/a40d6ff455bbc7d33be2828893ce395441e792c6ffb9df2f959106d62cb29f5a/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..c733cbfe984d0e561e6a937f6ca468d338462449 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:31392/a40d6ff455bbc7d33be2828893ce395441e792c6ffb9df2f959106d62cb29f5a/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:00.092105+00:00", + "files": { + "tensors.safetensors": "865722421b5e5b05baa6d4b31cda33fe91623053fba431a5f76f6d9348546d17" + }, + "metadata": { + "created_at": "2026-08-03 04:21:52 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:31392", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "a40d6ff455bbc7d33be2828893ce395441e792c6ffb9df2f959106d62cb29f5a", + "protein_id": "dynamicmpnn:train:single_chain:31392", + "sequence_sha256": "a40d6ff455bbc7d33be2828893ce395441e792c6ffb9df2f959106d62cb29f5a", + "shape": [ + 89, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:31392", + "requested_modalities": [ + "single" + ], + "sequence": "MRGSNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPGSRSHHHHHH", + "sequence_sha256": "a40d6ff455bbc7d33be2828893ce395441e792c6ffb9df2f959106d62cb29f5a" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 89, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:36313/43525eb517ca6e1b412019bc61c4675566c04b681ad3d9ff2028e646ec649dbe/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:36313/43525eb517ca6e1b412019bc61c4675566c04b681ad3d9ff2028e646ec649dbe/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..d1f0aec7988c36926a15c4b5a8dde5c1752dec41 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:36313/43525eb517ca6e1b412019bc61c4675566c04b681ad3d9ff2028e646ec649dbe/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:53.641935+00:00", + "files": { + "tensors.safetensors": "42e73cacd7536e5099ec8c90a6a0d7936878e2e9fb8c2538fa7353bd4c7d532e" + }, + "metadata": { + "created_at": "2026-08-03 03:01:19 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:36313", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "43525eb517ca6e1b412019bc61c4675566c04b681ad3d9ff2028e646ec649dbe", + "protein_id": "dynamicmpnn:train:single_chain:36313", + "sequence_sha256": "43525eb517ca6e1b412019bc61c4675566c04b681ad3d9ff2028e646ec649dbe", + "shape": [ + 132, + 1024 + ], + "split": "test" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:36313", + "requested_modalities": [ + "single" + ], + "sequence": "QNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDGNIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDIYKIEKEENDVEPX", + "sequence_sha256": "43525eb517ca6e1b412019bc61c4675566c04b681ad3d9ff2028e646ec649dbe" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 132, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:36971/da1af00951b83dc1c58c245cf78fca7af4d2fac42402c4028336e2b402746e5a/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:36971/da1af00951b83dc1c58c245cf78fca7af4d2fac42402c4028336e2b402746e5a/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..2194a7cf02f9dad8a9257bfc62796b2756bc4e77 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:36971/da1af00951b83dc1c58c245cf78fca7af4d2fac42402c4028336e2b402746e5a/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:04.103862+00:00", + "files": { + "tensors.safetensors": "ddca95b9c28737bb360fde57d6da0db78d2fba65c23f5d30cde83a056e9209c6" + }, + "metadata": { + "created_at": "2026-08-03 05:07:40 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:36971", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "da1af00951b83dc1c58c245cf78fca7af4d2fac42402c4028336e2b402746e5a", + "protein_id": "dynamicmpnn:train:single_chain:36971", + "sequence_sha256": "da1af00951b83dc1c58c245cf78fca7af4d2fac42402c4028336e2b402746e5a", + "shape": [ + 230, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:36971", + "requested_modalities": [ + "single" + ], + "sequence": "PPHWGYFGEEGPQYWGELAPEFSTCKTGKNQSPINLKPQTAVGTTSLPGFDVYYRETALKLINNGHTLQVNIPLGSYIKINGHRYELLQYHFHTPSEHQRDGFNYPMEMHLVHKDGDGNLAVIAILFQEGEENETLAKLMSFLPQTLKKQEIHESVKIHPAKFFPADKKFYKYSGSLTTPPCSEGVYWMVFKQPIQASVTQLEKMHEYLGSNARPVQRQNARTLLKSWPD", + "sequence_sha256": "da1af00951b83dc1c58c245cf78fca7af4d2fac42402c4028336e2b402746e5a" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 230, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:37261/6264c16711444b452d1490d3c832acced5ca454e4f85056590ed126915b812b6/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:37261/6264c16711444b452d1490d3c832acced5ca454e4f85056590ed126915b812b6/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..278be4bd9ac3a24a5fdf5ed6da4c5b6ff00e2bb2 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:37261/6264c16711444b452d1490d3c832acced5ca454e4f85056590ed126915b812b6/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:55.642798+00:00", + "files": { + "tensors.safetensors": "bef0006df902a11c291678b546e639ac7e730f6e3d9eea9f6d83bb515760777d" + }, + "metadata": { + "created_at": "2026-08-03 03:27:09 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:37261", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "6264c16711444b452d1490d3c832acced5ca454e4f85056590ed126915b812b6", + "protein_id": "dynamicmpnn:train:single_chain:37261", + "sequence_sha256": "6264c16711444b452d1490d3c832acced5ca454e4f85056590ed126915b812b6", + "shape": [ + 239, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:37261", + "requested_modalities": [ + "single" + ], + "sequence": "GADHVKGNGKLSTKKITIDDFNAIKFDGVIDFNYEQSESTPHIEITVDENLHPYVNIDIQDRVLTVGFKGAKVDHFTKFIVKTNSKWLKEVKASGNANFIANSPLKGDELKINANSNCLVQLKQKVEVGKLDLNVSGSANVVNELKTDKLECSINGSGTINLKAGNAEEADYSITTDGEIAFGVAVPEVNCKITGKGSAQIHPTDNLKATIVGKGNIRYKGPTAVQQKVIGKGTVEEVK", + "sequence_sha256": "6264c16711444b452d1490d3c832acced5ca454e4f85056590ed126915b812b6" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 239, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:3763/d3b992e90348c33d66fe7fc862c49dcc844c87a4d24cc4702fae11f0c613f85c/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:3763/d3b992e90348c33d66fe7fc862c49dcc844c87a4d24cc4702fae11f0c613f85c/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..919aaedb265926099bf6bcc2c1b6bced049a684d --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:3763/d3b992e90348c33d66fe7fc862c49dcc844c87a4d24cc4702fae11f0c613f85c/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:03.674867+00:00", + "files": { + "tensors.safetensors": "a011bed9a104e7989713b5d5937470f6a9c11febc3fdfccdc884eace4d04135e" + }, + "metadata": { + "created_at": "2026-08-03 05:03:32 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:3763", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "d3b992e90348c33d66fe7fc862c49dcc844c87a4d24cc4702fae11f0c613f85c", + "protein_id": "dynamicmpnn:train:single_chain:3763", + "sequence_sha256": "d3b992e90348c33d66fe7fc862c49dcc844c87a4d24cc4702fae11f0c613f85c", + "shape": [ + 408, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:3763", + "requested_modalities": [ + "single" + ], + "sequence": "GHRNLVRKSVRNLSPAERASLVAALKSLQEDSSADGFQSLASFHAQPPLCPAPAANKAFACCVHGMATFPEWHRLYTVQFEDALRRHGSVVGIPYWDTVVPQEDLPAFFNDEIWDDALFHANFTNPFNGADIDFNHQKIARDINVDKLAKEGPKGYDTWSFKQYIYALEQEDYCDFEVQFEIAHNAIHAWVGGTEEYSMGHLHYASYDPVFILHHSNTDRLFALWQELQKFRGHDPNEVNCALEMMREPLKPFSFGAPYNLNPTTKEHSKPEDTFDYKGHFHYEYDHLELQGMNVQRLHDYINQQKEADRVFAGFLLEGIGTSAHLDFSICAIDGECTHAGYFDVLGGSLETPWQFDRLYKYEITDVLESKGLDVHDVFDIKITQTSWDNEDISTDRFPPPSVIYVPK", + "sequence_sha256": "d3b992e90348c33d66fe7fc862c49dcc844c87a4d24cc4702fae11f0c613f85c" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 408, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:4176/ce3e9e743dba8dbacd0856bc56eb15d36e821d0c8100488939c5261a4d4f4421/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:4176/ce3e9e743dba8dbacd0856bc56eb15d36e821d0c8100488939c5261a4d4f4421/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..46f546aca3288405315eda66cfa063048ece51ca --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:4176/ce3e9e743dba8dbacd0856bc56eb15d36e821d0c8100488939c5261a4d4f4421/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:03.238877+00:00", + "files": { + "tensors.safetensors": "5d05275de572027dccc16691dcb84858ec8a5a7a6556853b58937b570a8184fd" + }, + "metadata": { + "created_at": "2026-08-03 04:58:32 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:4176", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "ce3e9e743dba8dbacd0856bc56eb15d36e821d0c8100488939c5261a4d4f4421", + "protein_id": "dynamicmpnn:train:single_chain:4176", + "sequence_sha256": "ce3e9e743dba8dbacd0856bc56eb15d36e821d0c8100488939c5261a4d4f4421", + "shape": [ + 153, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:4176", + "requested_modalities": [ + "single" + ], + "sequence": "HDERTFVMVKPDGVQRGLIGDIVTRLETKGLKMVGGKFMRIDEELAHEHYAEHEDKPFFDGLVSFITSGPVFAMVWEGADATRQVRQLMGATDAQDAAPGTIRGDYGNDLGHNLIHGSDHEDEGANEREIALFFDDDELVDWDRDASAWVYEX", + "sequence_sha256": "ce3e9e743dba8dbacd0856bc56eb15d36e821d0c8100488939c5261a4d4f4421" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 153, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:41883/b2496add78601de3d5e4d317766cfa6502c827ee7b0ca810c0a671ba4e5349bd/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:41883/b2496add78601de3d5e4d317766cfa6502c827ee7b0ca810c0a671ba4e5349bd/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..b11ef665b842389a8b0f7a5de7254401e816b532 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:41883/b2496add78601de3d5e4d317766cfa6502c827ee7b0ca810c0a671ba4e5349bd/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:01.301687+00:00", + "files": { + "tensors.safetensors": "be76f86a76bc7e1d27a3284e0164defa94760aae2a799a7ea20eac7a622201ab" + }, + "metadata": { + "created_at": "2026-08-03 04:37:17 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:41883", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "b2496add78601de3d5e4d317766cfa6502c827ee7b0ca810c0a671ba4e5349bd", + "protein_id": "dynamicmpnn:train:single_chain:41883", + "sequence_sha256": "b2496add78601de3d5e4d317766cfa6502c827ee7b0ca810c0a671ba4e5349bd", + "shape": [ + 270, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:41883", + "requested_modalities": [ + "single" + ], + "sequence": "ERVVIGSKPFNEQYILANMIAILLEENGYKAEVKEGLGGTLVNYEALKRNDIQLYVEYTGTAYNVILRKQPPELWDQQYIFDEVKKGLLEADGVVVAAKLGFRDDYALAVRADWAEENGVEKISDLAEFADQLVFGSDPEFASRPDGLPQIKKVYGFEFKEVKQMEPTLMYEAIKNKQVDVIPAYTTDSRVDLFNLKILEDDKGALPPYDAIIIVNGNTAKDEKLISVLKLLEDRIDTDTMRALNYQYDVEKKDAREIAMSFLKEQGLVK", + "sequence_sha256": "b2496add78601de3d5e4d317766cfa6502c827ee7b0ca810c0a671ba4e5349bd" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 270, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:43313/0dbd11ef79276c5c79d38a31313fe65f9f29c343b05869e28df34445ea93eb91/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:43313/0dbd11ef79276c5c79d38a31313fe65f9f29c343b05869e28df34445ea93eb91/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..45292fa43375a4ae382aaf947db40bcb5eb0f851 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:43313/0dbd11ef79276c5c79d38a31313fe65f9f29c343b05869e28df34445ea93eb91/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:49.539998+00:00", + "files": { + "tensors.safetensors": "0a2a9bef89907a8db0183487c726285d8fb73a2a7d425b77f4fdc3dc3a857227" + }, + "metadata": { + "created_at": "2026-08-03 02:14:39 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:43313", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "0dbd11ef79276c5c79d38a31313fe65f9f29c343b05869e28df34445ea93eb91", + "protein_id": "dynamicmpnn:train:single_chain:43313", + "sequence_sha256": "0dbd11ef79276c5c79d38a31313fe65f9f29c343b05869e28df34445ea93eb91", + "shape": [ + 40, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:43313", + "requested_modalities": [ + "single" + ], + "sequence": "AEVLTSEQAEELHKHVIDGTRVFLVIAAIAHFLAFTLTPW", + "sequence_sha256": "0dbd11ef79276c5c79d38a31313fe65f9f29c343b05869e28df34445ea93eb91" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 40, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:45285/984b29652620c91051dce070de820686a4e426c1c57dd87a4c9048730379fadd/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:45285/984b29652620c91051dce070de820686a4e426c1c57dd87a4c9048730379fadd/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..931a41e6e72b3dbdcbfb8072472f1fc73deafdab --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:45285/984b29652620c91051dce070de820686a4e426c1c57dd87a4c9048730379fadd/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:59.185904+00:00", + "files": { + "tensors.safetensors": "93ff1d817f6da98cbb03e18f30ab70092d7ad6ae46ae4655a4e8bf96790fdbe7" + }, + "metadata": { + "created_at": "2026-08-03 04:08:49 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:45285", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "984b29652620c91051dce070de820686a4e426c1c57dd87a4c9048730379fadd", + "protein_id": "dynamicmpnn:train:single_chain:45285", + "sequence_sha256": "984b29652620c91051dce070de820686a4e426c1c57dd87a4c9048730379fadd", + "shape": [ + 41, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:45285", + "requested_modalities": [ + "single" + ], + "sequence": "ETEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKY", + "sequence_sha256": "984b29652620c91051dce070de820686a4e426c1c57dd87a4c9048730379fadd" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 41, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:4720/df97933b64708a3d61fcd019c6d07fbef3687e1476143e8fad1f14ffe6ff96ce/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:4720/df97933b64708a3d61fcd019c6d07fbef3687e1476143e8fad1f14ffe6ff96ce/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..77d0782af03da961651da130d4f48e77913a30cd --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:4720/df97933b64708a3d61fcd019c6d07fbef3687e1476143e8fad1f14ffe6ff96ce/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:04.384872+00:00", + "files": { + "tensors.safetensors": "2f887a6e50b1dcb3b277ad5ebc986b06f9bcb010e3b8b1bb464e9ceaa87b99cb" + }, + "metadata": { + "created_at": "2026-08-03 05:10:47 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:4720", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "df97933b64708a3d61fcd019c6d07fbef3687e1476143e8fad1f14ffe6ff96ce", + "protein_id": "dynamicmpnn:train:single_chain:4720", + "sequence_sha256": "df97933b64708a3d61fcd019c6d07fbef3687e1476143e8fad1f14ffe6ff96ce", + "shape": [ + 263, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:4720", + "requested_modalities": [ + "single" + ], + "sequence": "XNLSEVVISEAIITAFMEKLKSHLETDVAIVGGGPSGLVAGYYLAKKGYRVAIFERRLSIGGGMWAGAMFFNEIVVQEMGREILDEFGVNYREFKPGYYLADAVEATTTIASKAVKAGATVFNGVTAEDVVLKQVNGQYRVCGLVINWTTVELNHLMVDPLVITAKYVVDATGHDASVVSTLQRKAGIKLNTETGCVVGEKPLWASVGEEDTVKNSKEVFPGIYVSGMAANATCGSHRMGPVFGGMLMSGKKVAEEIAAKLNQ", + "sequence_sha256": "df97933b64708a3d61fcd019c6d07fbef3687e1476143e8fad1f14ffe6ff96ce" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 263, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:50704/c5e5be2c1c80497fc92a737b51133bb462f679f0cd9b51a645bb395da7fe9b2b/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:50704/c5e5be2c1c80497fc92a737b51133bb462f679f0cd9b51a645bb395da7fe9b2b/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..8c6d0d8ee7fb38e9651e08282d213254f6e74b35 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:50704/c5e5be2c1c80497fc92a737b51133bb462f679f0cd9b51a645bb395da7fe9b2b/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:02.557076+00:00", + "files": { + "tensors.safetensors": "acfdfd06158442bc599b05052d648d948aaff6f1af83de522b3b6037850df981" + }, + "metadata": { + "created_at": "2026-08-03 04:49:13 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:50704", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "c5e5be2c1c80497fc92a737b51133bb462f679f0cd9b51a645bb395da7fe9b2b", + "protein_id": "dynamicmpnn:train:single_chain:50704", + "sequence_sha256": "c5e5be2c1c80497fc92a737b51133bb462f679f0cd9b51a645bb395da7fe9b2b", + "shape": [ + 602, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:50704", + "requested_modalities": [ + "single" + ], + "sequence": "EAPIALLSVYDKTGLLPFAKSLKELGFRLLGSGGTAKMIREAGMEIEDVSNITKAPEMLGGRVKTLHPAVHGGILSRDIPSDLADLATNKISPITLVVCNLYPFVLQTAKPDCTLAGAIEEIDIGGVTLLRAAAKNHGRVSIISSPSDYETIVAELRAKGEVSAETRRGLAIKAFEDTKSYDEAISDYFRKVYATPGVEEEMKAGAGVGYQRLGLRYGANPHQKPAQAFVEQGEMPIKVLSGSPGYINLLDALNSWALVKELAAGLDLPAAASFKHVSPAGAAVGLPLDERAAKVFGVEDLKELSPLACAYARARGADRMSSFGDFIALSHTVDTPTAKIISREVSDGVIAPGYEPEALEILSKKKGGKYCVLQMDPTYVPPEIETRQVYGISLQQKRNDCKIDESLFKNVVTANKDLPKSAVTDLVVATLALKYTQSNSVCYALNGTVIGLGAGQQSRIHCTRLAGDKADNWWLRHHPRVLELPFKKGTKRADKANAIDLFVTGQAFEAEGGERAQWESLFETVPEPLTKEEREKHMKELTGVACASDAFFPFPDNVHRAKRSGATYLAAPSGSIMDKECIKAADESNLVFCHTDLRLFHH", + "sequence_sha256": "c5e5be2c1c80497fc92a737b51133bb462f679f0cd9b51a645bb395da7fe9b2b" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 602, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:53325/9a87da0290136ffbbee7a297a20aebc09f55e7425b577bf7773d3bc61cae369c/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:53325/9a87da0290136ffbbee7a297a20aebc09f55e7425b577bf7773d3bc61cae369c/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..675a2dccf6e7beead701658c6b0f6b6b629c0d39 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:53325/9a87da0290136ffbbee7a297a20aebc09f55e7425b577bf7773d3bc61cae369c/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:59.372073+00:00", + "files": { + "tensors.safetensors": "d1e75c6dc89502c4e10317d4f1109dfe31699b7d19e37b8c313e1c2988ce1d72" + }, + "metadata": { + "created_at": "2026-08-03 04:10:11 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:53325", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "9a87da0290136ffbbee7a297a20aebc09f55e7425b577bf7773d3bc61cae369c", + "protein_id": "dynamicmpnn:train:single_chain:53325", + "sequence_sha256": "9a87da0290136ffbbee7a297a20aebc09f55e7425b577bf7773d3bc61cae369c", + "shape": [ + 492, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:53325", + "requested_modalities": [ + "single" + ], + "sequence": "XAKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDINTPFDAVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGKVDLTVALIHEGVPARQSSGGTDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYKEKPHNFTVKNFELKTIYADEWKPDQQTKQVIDGWNKKLDEVVQQTVAQSPVELKRAYGESASLGNLAADALLAAAGKNTQLALTNSGGIRNEIPAGAITGGVISTFPFPNELVTELTGKQLRSLEHGASLSNGVLQVSKGLEKYDSSKPVGQRVITLTLNGKPIEDATVYHIATQSFLADGGDGFTAFTEGKARNITGGYYVYHAVVDYFKAGNTITDEQLNGRVKDIKX", + "sequence_sha256": "9a87da0290136ffbbee7a297a20aebc09f55e7425b577bf7773d3bc61cae369c" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 492, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:58909/8b5854809eb9554b7c529edc21442036e92b2dfffc3e6d54edd37ce07811410a/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:58909/8b5854809eb9554b7c529edc21442036e92b2dfffc3e6d54edd37ce07811410a/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..a491d2cda8448a877ae007e7307dee16cb0a87ca --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:58909/8b5854809eb9554b7c529edc21442036e92b2dfffc3e6d54edd37ce07811410a/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:58.470521+00:00", + "files": { + "tensors.safetensors": "dd1b810d0b6e02bef2b17a1791fa2564ee1faff723be1b8ca776ad57e3e20cbd" + }, + "metadata": { + "created_at": "2026-08-03 04:00:34 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:58909", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "8b5854809eb9554b7c529edc21442036e92b2dfffc3e6d54edd37ce07811410a", + "protein_id": "dynamicmpnn:train:single_chain:58909", + "sequence_sha256": "8b5854809eb9554b7c529edc21442036e92b2dfffc3e6d54edd37ce07811410a", + "shape": [ + 398, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:58909", + "requested_modalities": [ + "single" + ], + "sequence": "XXMDFPLANLFFVPSEDATAFGRRLRAAAQQAPIVFDTAFGMPILLRKSHITTAYRDTATFSTRMFQAGILNGGLAAMQGDEHARMRRVYNMFFLPRAVSQYEERFVRPISEQVVDRLAGKPRVDLLEDFAMELPRRVIGELFGFPAEKLHETDERVRAMLRGLVRMHDPAAVAESQRAYGETLGLITEVVERESRDTSDTLLGEILRTLKAEHMDTIEASRQIVLSLILGGYETTSWLVANTIHALLAHPDTLARVRQDPSLLPAAIEEGMRWCPSIFGVLRMVERDVRLDDQALSAGTVVCLAGIAGNYDETAYPSPEVYDIDRKPLPAANVFGGGAHFCVGAPLARMEARVGLQALLARFPGLRAVPEERPSFMYGAKDSVAHGPDKLPVLLHHX", + "sequence_sha256": "8b5854809eb9554b7c529edc21442036e92b2dfffc3e6d54edd37ce07811410a" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 398, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:60335/5651fa1cc799338c7fd21be99567b4dbc81da2931b3eb91c34f02d47a4c1fc48/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:60335/5651fa1cc799338c7fd21be99567b4dbc81da2931b3eb91c34f02d47a4c1fc48/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..cd0c093a5605877b24c9a4a09e972abfe18a9798 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:60335/5651fa1cc799338c7fd21be99567b4dbc81da2931b3eb91c34f02d47a4c1fc48/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:54.749593+00:00", + "files": { + "tensors.safetensors": "3b59b74a927cd683a3575b8c63c7f5830a3a995c6e5f640e36a1fd4d7e30eff8" + }, + "metadata": { + "created_at": "2026-08-03 03:14:22 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:60335", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "5651fa1cc799338c7fd21be99567b4dbc81da2931b3eb91c34f02d47a4c1fc48", + "protein_id": "dynamicmpnn:train:single_chain:60335", + "sequence_sha256": "5651fa1cc799338c7fd21be99567b4dbc81da2931b3eb91c34f02d47a4c1fc48", + "shape": [ + 303, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:60335", + "requested_modalities": [ + "single" + ], + "sequence": "ETEIMVAYGNQPGEPIDKAMHFWADKVKEKSNGDIVFKLFPSSQLGSETEVLEQAKFGANIITISDYGALMDIVPDLGVINAPYISQSFEKKSKLLHSDWFKDLSDKLDQHDIHIIVPDVIYGTRHLLTKKPVTKPSDLKGMKVRVQHSRLFLQTINAMGGVPTPMSLSDVYPGLSEGIIDGLENPTVVLFGGKFFEVAKNLNLTAHTKHMSPFVAGTAFWNNLTPEQQKIIVDASREMVTYGGGLIEQAENEALENLKKAGVTVNDVDLPAFEASVADVISTGFPEWSPNLYKNVQEKLSQF", + "sequence_sha256": "5651fa1cc799338c7fd21be99567b4dbc81da2931b3eb91c34f02d47a4c1fc48" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 303, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:62650/4eb1f8533467fad1fd9b6cd49f151c510aeab2ce71a85c43672bda98f8e6e3c1/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:62650/4eb1f8533467fad1fd9b6cd49f151c510aeab2ce71a85c43672bda98f8e6e3c1/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..a7ecb8e9a7fc3493c3ab564849e37eef5ba92f18 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:62650/4eb1f8533467fad1fd9b6cd49f151c510aeab2ce71a85c43672bda98f8e6e3c1/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:54.232681+00:00", + "files": { + "tensors.safetensors": "f1b66b7085ed97e0104aa461253f6f946e687ea65de794ad42f7e9d96796fe66" + }, + "metadata": { + "created_at": "2026-08-03 03:08:58 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:62650", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "4eb1f8533467fad1fd9b6cd49f151c510aeab2ce71a85c43672bda98f8e6e3c1", + "protein_id": "dynamicmpnn:train:single_chain:62650", + "sequence_sha256": "4eb1f8533467fad1fd9b6cd49f151c510aeab2ce71a85c43672bda98f8e6e3c1", + "shape": [ + 222, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:62650", + "requested_modalities": [ + "single" + ], + "sequence": "MSWLFGDKTPTDDANAAVGGQDTTKPKELSLKQSLGFEPNINNIISGPGGMHVDTARLHPLAGLDKGVEYLDLEEEQLSSLEGSQGLIPSRGWTDDLCYGTGAVYLLGLGIGGFSGMMQGLQNIPPNSPGKLQLNTVLNHITKRGPFLGNNAGILALSYNIINSTIDALRGKHDTAGSIGAGALTGALFKSSKGLKPMGYSSAMVAAACAVWCSVKKRLLEK", + "sequence_sha256": "4eb1f8533467fad1fd9b6cd49f151c510aeab2ce71a85c43672bda98f8e6e3c1" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 222, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:64360/950792c9a6f2936fb6640dc0ef140b6dac74d76593f452081fbb4f4810ae5ed1/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:64360/950792c9a6f2936fb6640dc0ef140b6dac74d76593f452081fbb4f4810ae5ed1/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..d583528fa1b111c5a8d36a06d00f53112bf863b2 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:64360/950792c9a6f2936fb6640dc0ef140b6dac74d76593f452081fbb4f4810ae5ed1/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:59.040001+00:00", + "files": { + "tensors.safetensors": "97d6630e6d28c2924c1391cf274f9326ec27ed42942d76a9fc704c84c57e82e5" + }, + "metadata": { + "created_at": "2026-08-03 04:07:41 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:64360", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "950792c9a6f2936fb6640dc0ef140b6dac74d76593f452081fbb4f4810ae5ed1", + "protein_id": "dynamicmpnn:train:single_chain:64360", + "sequence_sha256": "950792c9a6f2936fb6640dc0ef140b6dac74d76593f452081fbb4f4810ae5ed1", + "shape": [ + 46, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:64360", + "requested_modalities": [ + "single" + ], + "sequence": "VHATPLIRRLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRA", + "sequence_sha256": "950792c9a6f2936fb6640dc0ef140b6dac74d76593f452081fbb4f4810ae5ed1" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 46, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:65640/f3b5ed1b35e2ce1cadbd1a4e8b2d95eb4a8d1a0c756f4c579c2969f261d29ec5/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:65640/f3b5ed1b35e2ce1cadbd1a4e8b2d95eb4a8d1a0c756f4c579c2969f261d29ec5/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..310ce94cac632f14b6c7ad3c761c2e85ba28fdaa --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:65640/f3b5ed1b35e2ce1cadbd1a4e8b2d95eb4a8d1a0c756f4c579c2969f261d29ec5/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:05.938087+00:00", + "files": { + "tensors.safetensors": "c340736fd9f0e0f0fda28eae8b9b20b0f8794e6938fb376abdc7c2698d036d13" + }, + "metadata": { + "created_at": "2026-08-03 05:23:07 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:65640", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "f3b5ed1b35e2ce1cadbd1a4e8b2d95eb4a8d1a0c756f4c579c2969f261d29ec5", + "protein_id": "dynamicmpnn:train:single_chain:65640", + "sequence_sha256": "f3b5ed1b35e2ce1cadbd1a4e8b2d95eb4a8d1a0c756f4c579c2969f261d29ec5", + "shape": [ + 493, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:65640", + "requested_modalities": [ + "single" + ], + "sequence": "TSEIILQERNSSLPRVWSKKTFTDATDFLGCSYAVENGTSIIGDFANAKYPVVNKKLLERYPSYINPKELRTTETKALSYSDFDRLEKNKTFTKTVKSGFSLNLGPFKFGRQKTIKETFVHNTDDSEKVVHGELSIEVVNGLNLQTAPSALRKIAADYLDELFVDALYNSSVELQSYGEFVLTGYYTGGRASALFYGVDTNSIQFDSKEKDDVAINASYEWKNKKPTGNLSIGTKRENSETITNKFSALSYSIKTLGGAYGYSISTPPYDITNYSIDLTPWLQSLNDPKTHTIDLQDGGLYPISDFILEENFKQRYNDTHDFQYQESLEEPYIEIIKYIRKSNSGEKLYDIVPVLNTRQGDKLIFSNPDAASQSDEELKANSIPATFLTKSNAIKDEKSKYYQLKIKADPNKTINPIIQTTLSFQINNVDEKGYKFKNANTNIWYIYNPTSYCFAYYDDDYIPDAYGILDWVNGIPIKAVTTTLYQRYKIYGL", + "sequence_sha256": "f3b5ed1b35e2ce1cadbd1a4e8b2d95eb4a8d1a0c756f4c579c2969f261d29ec5" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 493, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:66667/39e059edecb92150ed60ca346159c7c3e22e817ef0596e87fad3dbe106a2482f/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:66667/39e059edecb92150ed60ca346159c7c3e22e817ef0596e87fad3dbe106a2482f/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..5bd707738d7a2a45f6e8bb511ad857dc8b7a0fe8 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:66667/39e059edecb92150ed60ca346159c7c3e22e817ef0596e87fad3dbe106a2482f/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:52.690735+00:00", + "files": { + "tensors.safetensors": "1bd15f9e9965780970338dd56f7cd959ae73bbf914b6ed65210f8cdbd5e590d3" + }, + "metadata": { + "created_at": "2026-08-03 02:50:38 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:66667", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "39e059edecb92150ed60ca346159c7c3e22e817ef0596e87fad3dbe106a2482f", + "protein_id": "dynamicmpnn:train:single_chain:66667", + "sequence_sha256": "39e059edecb92150ed60ca346159c7c3e22e817ef0596e87fad3dbe106a2482f", + "shape": [ + 164, + 1024 + ], + "split": "test" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:66667", + "requested_modalities": [ + "single" + ], + "sequence": "XPDNFYVGQAIGNGSCFFDSFRQSLEQQTGEQVTAEKLRNDCREFAQKNPPKWFTNAIVNSHDNNGQHRSETVDNYTADIMRNSRWGDPDVEGRILCEKYKVKLHVIENQTVDNQDLSLHELIDNSGSKSAGEYNKVDYDDSSTVHIINKGGLHFEPLLDRNKX", + "sequence_sha256": "39e059edecb92150ed60ca346159c7c3e22e817ef0596e87fad3dbe106a2482f" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 164, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:66857/d622ee28585539d715df66d104bd686a7e9835d55cf4a57e538ac374b9374a50/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:66857/d622ee28585539d715df66d104bd686a7e9835d55cf4a57e538ac374b9374a50/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..81cc338e82de1172c5a5af7b0018d043ac4db989 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:66857/d622ee28585539d715df66d104bd686a7e9835d55cf4a57e538ac374b9374a50/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:03.806419+00:00", + "files": { + "tensors.safetensors": "a3728303e4ee95d5ea99abc83fd1f10eada60964fd52bff29301fcf375a2c1f1" + }, + "metadata": { + "created_at": "2026-08-03 05:04:54 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:66857", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "d622ee28585539d715df66d104bd686a7e9835d55cf4a57e538ac374b9374a50", + "protein_id": "dynamicmpnn:train:single_chain:66857", + "sequence_sha256": "d622ee28585539d715df66d104bd686a7e9835d55cf4a57e538ac374b9374a50", + "shape": [ + 199, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:66857", + "requested_modalities": [ + "single" + ], + "sequence": "MIQVEENEHIQTLVYQLNKEGKSICGDSFFMKADDKELICAVADGLGSGSLANESSAAIKDLVENYASEDVESIIERCNQAMKNKRGATASILKINFEQRQFTYCSVGNVRFILHSPSGESFYPLPISGYLSGKPQKYKTHTATYEKGSKFIIHTDGLNVPDIRSHLKKGQSVEEISNSLKMYTTSRKDDLTYILGQLS", + "sequence_sha256": "d622ee28585539d715df66d104bd686a7e9835d55cf4a57e538ac374b9374a50" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 199, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:67748/4f57fd31630cf260163aebfaf32ad178561b80e5d6b655f0eb37f6262effe8ff/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:67748/4f57fd31630cf260163aebfaf32ad178561b80e5d6b655f0eb37f6262effe8ff/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..ff45783063442e96fef6c4f2c42b862b0220d680 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:67748/4f57fd31630cf260163aebfaf32ad178561b80e5d6b655f0eb37f6262effe8ff/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:54.284241+00:00", + "files": { + "tensors.safetensors": "69d77cb59e38efc85961459ea7167be7c9ce488de4904ddaaf0b4d6a63c152cc" + }, + "metadata": { + "created_at": "2026-08-03 03:09:32 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:67748", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "4f57fd31630cf260163aebfaf32ad178561b80e5d6b655f0eb37f6262effe8ff", + "protein_id": "dynamicmpnn:train:single_chain:67748", + "sequence_sha256": "4f57fd31630cf260163aebfaf32ad178561b80e5d6b655f0eb37f6262effe8ff", + "shape": [ + 255, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:67748", + "requested_modalities": [ + "single" + ], + "sequence": "ANPSRLIVAIEIVEDEIPLTXXKVDGLKARIILIEDNTSEVGTQRVLPGTLVSDKDGSQSLVYPLFEAPVSFFGKLGDSNGMRVWSTTTADIEEFDEAAMAKFKTRQFRIQLIEKPEXSPVIVKTADQQDYLNITFDKGVYSDMYNADLYVGDVLVDSYSDDGVVSGLSPLYSPFSQFYVYHENIDLVRQMIYDTEMRVNPAAAAHTTAPGEIDFLTFLAVDGDPYQGIQVLGPLDGGITLGKDGNIYASGGTDG", + "sequence_sha256": "4f57fd31630cf260163aebfaf32ad178561b80e5d6b655f0eb37f6262effe8ff" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 255, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:70957/e75c676703fe7ac4ad82ac81405ec6301da76e7caba8cc13d9d665865609c7e1/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:70957/e75c676703fe7ac4ad82ac81405ec6301da76e7caba8cc13d9d665865609c7e1/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..705bf5ee1da776cf698ebdd275973f4fa97ce777 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:70957/e75c676703fe7ac4ad82ac81405ec6301da76e7caba8cc13d9d665865609c7e1/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:05.078352+00:00", + "files": { + "tensors.safetensors": "92a4521538bc26b82a37a2beebdfa8a9c8a926a25ab1e025b2120e7a651a5187" + }, + "metadata": { + "created_at": "2026-08-03 05:15:06 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:70957", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "e75c676703fe7ac4ad82ac81405ec6301da76e7caba8cc13d9d665865609c7e1", + "protein_id": "dynamicmpnn:train:single_chain:70957", + "sequence_sha256": "e75c676703fe7ac4ad82ac81405ec6301da76e7caba8cc13d9d665865609c7e1", + "shape": [ + 191, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:70957", + "requested_modalities": [ + "single" + ], + "sequence": "XXSAPVAGKDFEVMKSPQPVSAPAGKVEVIEFFWYGCPHCYEFEPTIEAWVKKQGDKIAFKRVPVAFRDDFVPHSKLFYALAALGVSEKVTPAVFNAIHKEKNYLLTPQAQADFLATQGVDKKKFLDAYNSFSVQGQVKQSAELLKNYNIDGVPTIVVQGKYKTGPAYTNSLEGTAQVLDFLVKQVQDKKL", + "sequence_sha256": "e75c676703fe7ac4ad82ac81405ec6301da76e7caba8cc13d9d665865609c7e1" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 191, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:70966/7cf225cea56789a599c59c57d5914ed12a7dc80260516de1f9485a56ec2a3b42/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:70966/7cf225cea56789a599c59c57d5914ed12a7dc80260516de1f9485a56ec2a3b42/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..fa6c28afd2730e99b4127704f0b9ec68376bc455 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:70966/7cf225cea56789a599c59c57d5914ed12a7dc80260516de1f9485a56ec2a3b42/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:57.539385+00:00", + "files": { + "tensors.safetensors": "ed07579ee5df4d45e04b087b9cde5d71b7ddf62e0bec55f7a1846ee515f87656" + }, + "metadata": { + "created_at": "2026-08-03 03:51:06 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:70966", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "7cf225cea56789a599c59c57d5914ed12a7dc80260516de1f9485a56ec2a3b42", + "protein_id": "dynamicmpnn:train:single_chain:70966", + "sequence_sha256": "7cf225cea56789a599c59c57d5914ed12a7dc80260516de1f9485a56ec2a3b42", + "shape": [ + 200, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:70966", + "requested_modalities": [ + "single" + ], + "sequence": "PIELLPETPSQTAGPYVHIGLALEAAGNPTRDQEIWNRLAKPDAPGEHILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNAAGVPMAPHINISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKRCEVDGKTAYRFDIRIQGEGETVFFDF", + "sequence_sha256": "7cf225cea56789a599c59c57d5914ed12a7dc80260516de1f9485a56ec2a3b42" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 200, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:72037/a12e4d879a588f76e29f2001a406d799e6796a8965882cab34ddfceeb38df3b1/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:72037/a12e4d879a588f76e29f2001a406d799e6796a8965882cab34ddfceeb38df3b1/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..e806ee64680a584163afa3cc30226af655f36c51 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:72037/a12e4d879a588f76e29f2001a406d799e6796a8965882cab34ddfceeb38df3b1/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:59.891792+00:00", + "files": { + "tensors.safetensors": "0ee384fce9e195dd3cacaf39c266d2aaaec2096c7694116874bdd2a87a6c3086" + }, + "metadata": { + "created_at": "2026-08-03 04:19:12 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:72037", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "a12e4d879a588f76e29f2001a406d799e6796a8965882cab34ddfceeb38df3b1", + "protein_id": "dynamicmpnn:train:single_chain:72037", + "sequence_sha256": "a12e4d879a588f76e29f2001a406d799e6796a8965882cab34ddfceeb38df3b1", + "shape": [ + 316, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:72037", + "requested_modalities": [ + "single" + ], + "sequence": "CTGVRFSDDEGNTYFGRNLDWSFSYGETILVTPRGYHYDTVFGAGGKAKPNAVIGVGVVMADRPMYFDCANEHGLAIAGLNFPGYASFVHEPVEGTENVATFEFPLWVARNFDSVDEVEETLRNVTLVSQIVPGQQESLLHWFIGDGKRSIVVEQMADGMHVHHDDVDVLTNQPTFDFHMENLRNYMCVSNEMAEPTSWGKASLTAWGAGVGMHGIPGDVSSPSRFVRVAYTNAHYPQQNDEAANVSRLFHTLGSVQMVDGMAKMGDGQFERTLFTSGYSSKTNTYYMNTYDDPAIRSYAMADYDMDSSELISVAR", + "sequence_sha256": "a12e4d879a588f76e29f2001a406d799e6796a8965882cab34ddfceeb38df3b1" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 316, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:74704/3c7060973a283fb90172f5405e2858902b01b107ae2266fb1b7a927ffc98f1bd/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:74704/3c7060973a283fb90172f5405e2858902b01b107ae2266fb1b7a927ffc98f1bd/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..427c143b89fb67724822eeaca4452ca6dbdde1da --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:74704/3c7060973a283fb90172f5405e2858902b01b107ae2266fb1b7a927ffc98f1bd/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:52.990195+00:00", + "files": { + "tensors.safetensors": "f01e4ef3cb4a665cf944a45b098fac2da4bbbe371c3d2c00b510d62a5534946e" + }, + "metadata": { + "created_at": "2026-08-03 02:53:39 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:74704", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "both_alternate_and_condition_aware", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "3c7060973a283fb90172f5405e2858902b01b107ae2266fb1b7a927ffc98f1bd", + "protein_id": "dynamicmpnn:train:single_chain:74704", + "sequence_sha256": "3c7060973a283fb90172f5405e2858902b01b107ae2266fb1b7a927ffc98f1bd", + "shape": [ + 427, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:74704", + "requested_modalities": [ + "single" + ], + "sequence": "ISDARANNAKTQSQYQPYKDAAWGFINHWYPALFTHELEEDQVQGIQICGVPIVLRRVNGKVFALKDQCLHRGVRLSEKPTCFTKSTISCWYHGFTFDLETGKLVTIVANPEDKLIGTTGVTTYPVHEVNGMIFVFVREDDFPDEDVPPLAHDLPFRFPERSEQFPHPLWPSSPSVLDDNAVVHGMHRTGFGNWRIACENGFDNAHILVHKDNTIVHAMDWVLPLGLLPTSDDCIAVVEDDDGPKGMMQWLFTDKWAPVLENQELGLKVEGLKGRHYRTSVVLPGVLMVENWPEEHVVQYEWYVPITDDTHEYWEILVRVCPTDEDRKKFQYRYDHMYKPLCLHGFNDSDLYAREAMQNFYYDGTGWDDEQLVATDISPITWRKLASRWNRGIAKPGRGVAGAVKDTSLIFKQTADGKRPGYKVEQI", + "sequence_sha256": "3c7060973a283fb90172f5405e2858902b01b107ae2266fb1b7a927ffc98f1bd" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 427, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:74750/d287578f5c23c515c6d61eda597603368d23b8dbe43318927404da8ad7144c3c/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:74750/d287578f5c23c515c6d61eda597603368d23b8dbe43318927404da8ad7144c3c/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..fe33567503f90ca741414fcbbd0609ee9f57cd0c --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:74750/d287578f5c23c515c6d61eda597603368d23b8dbe43318927404da8ad7144c3c/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:03.545520+00:00", + "files": { + "tensors.safetensors": "967b86caaa6b49aad86fa1c9a391ebaa8d5917cf91c3daf7964e4b6b9058bcf5" + }, + "metadata": { + "created_at": "2026-08-03 05:01:55 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:74750", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "d287578f5c23c515c6d61eda597603368d23b8dbe43318927404da8ad7144c3c", + "protein_id": "dynamicmpnn:train:single_chain:74750", + "sequence_sha256": "d287578f5c23c515c6d61eda597603368d23b8dbe43318927404da8ad7144c3c", + "shape": [ + 454, + 1024 + ], + "split": "test" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:74750", + "requested_modalities": [ + "single" + ], + "sequence": "XDLFKIADLFAYQVFDSRGFPTVACVVKLASGHTGEAMVPSGAXTGEKEAIELRDGDPKAYFGKGVSQAVQNVNQTIAPKLIGLNATDQAAIDALMIQLDGTPNKAKLGANAILAVSLAVAKAAASAQKTSLFKYLANQVMGLNKTEFILTVPMLNVINGGAHADNNIDFQEFMIMPLGANSMHQALKMASETFHALQKLLKQRGLNTNKGDEGGFAPNLKLAEEALDLMVEAIKAAGYQPGSDIAIALDVAASEFYDDTTKRYVFKKGIKAKILDEKEWSLTTAQMIAYLKKLTEQYPIISIEDGLSEHDWEGMETLTKTLGQHIQIVGDDLYCTNPAIAEKGVAHKATNSILIKLNQIGTLTETIKAINIAKDANWSQVISHRSGETEDTTIADLAVAACTGQIKTGSMSRSERIAKYNRLLQIELELGNNAKYLGWNTFKNIKPQKALEHX", + "sequence_sha256": "d287578f5c23c515c6d61eda597603368d23b8dbe43318927404da8ad7144c3c" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 454, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:75020/c6d71722ae4508a524edbcf56f213557e0105a7e70a6f83b0adaa166eb404f9a/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:75020/c6d71722ae4508a524edbcf56f213557e0105a7e70a6f83b0adaa166eb404f9a/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..0df4a03fafb47532670bf1c5b6b476a924b34a19 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:75020/c6d71722ae4508a524edbcf56f213557e0105a7e70a6f83b0adaa166eb404f9a/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:02.649158+00:00", + "files": { + "tensors.safetensors": "b6db64618bed338ce29db68bdc572053ba92d53f7da23d4cb152d926fdef77da" + }, + "metadata": { + "created_at": "2026-08-03 04:50:16 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:75020", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "c6d71722ae4508a524edbcf56f213557e0105a7e70a6f83b0adaa166eb404f9a", + "protein_id": "dynamicmpnn:train:single_chain:75020", + "sequence_sha256": "c6d71722ae4508a524edbcf56f213557e0105a7e70a6f83b0adaa166eb404f9a", + "shape": [ + 653, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:75020", + "requested_modalities": [ + "single" + ], + "sequence": "EAPPVTPEVLVRLADIGTMSASETTPLLSLSPDGRYVAFQVRQADPVTNLNVFRMVVKATDGATDAIDVDVGGEYLFWTIPSWGYARNAPSGANLTIQPRWSPSGTHLAYLRQDQGRVRVWRASVKGEGASPVIEDAYDIEDVQWLDDNTLIYSGRPGFVEAEAEIEREGRRGWVYDERFHPLTGARPRVLEPISIVYQVLDLKTGTRRAATPTEVARLREKPDPLRAMVGRTTFSVSRTDPQNINAPTTLVARRGEGEPVRCDEEACQNITRMWGDETANVLYFLRREGWASNEMALYRMPADALKPVRIWHATGLLQGCERQAKRLICAQESALQPRRLVTLNLTSGQMSPLYDPNPDLSRYRLPKVERLTLRNRNGIEVFSDLVLPPDYQLGTRLPLVIVQYSSRGFLRGGTGDENPILPLATAGFAVLSFHSPRSEASYQRFTSPIAQSKAEYSNWRNRWNILHTLEDLIDDLDRRGVIDPARVGLTGLADGATTVHFGLINSHRFAAAVTSSCCTDSFTASVMNGPRISGALKAYGIETDQADDGPFWAATSFVVNASRLDTPLLIQSADEEYLGALPGFTALQQARKPVELIIYPNEHHVKWQPAHRLAVYNRTIDWFRFWLMDQSDPAPDKAAQYDRWRALRALRQ", + "sequence_sha256": "c6d71722ae4508a524edbcf56f213557e0105a7e70a6f83b0adaa166eb404f9a" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 653, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:76651/c3134516f2f283fdf8bd773cd48af8e3c475dcf3fb9fadc525d214b1df4dbe20/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:76651/c3134516f2f283fdf8bd773cd48af8e3c475dcf3fb9fadc525d214b1df4dbe20/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..08dd680fe7d416dd2cb895b290bbc5c3c4955a90 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:76651/c3134516f2f283fdf8bd773cd48af8e3c475dcf3fb9fadc525d214b1df4dbe20/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:02.330541+00:00", + "files": { + "tensors.safetensors": "e36fb2921e50d4285919584bbf68e4fd0ba4fe1feadade88ac0ce041884aee14" + }, + "metadata": { + "created_at": "2026-08-03 04:46:19 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:76651", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "c3134516f2f283fdf8bd773cd48af8e3c475dcf3fb9fadc525d214b1df4dbe20", + "protein_id": "dynamicmpnn:train:single_chain:76651", + "sequence_sha256": "c3134516f2f283fdf8bd773cd48af8e3c475dcf3fb9fadc525d214b1df4dbe20", + "shape": [ + 326, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:76651", + "requested_modalities": [ + "single" + ], + "sequence": "XXESVTVAGIDCGTNSIRLKIARVDADGHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIAEHPIDGLRFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSNIGSVRTERHLTNDPPTQTQIDEAVADVDEHIDEAFRTVDAGKARTIIGVSGTVTTTALAGLKEYDHTVVDGHRLSFEDAYAVDDKFLRTRAERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAAKADHGEAIDSFVASEHGLLDGIVLDYGRRLLAQ", + "sequence_sha256": "c3134516f2f283fdf8bd773cd48af8e3c475dcf3fb9fadc525d214b1df4dbe20" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 326, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:80572/e16799f57f6dc22070bbc0d5d3d8e823197618ce956a4fc074075ce6fc2cee04/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:80572/e16799f57f6dc22070bbc0d5d3d8e823197618ce956a4fc074075ce6fc2cee04/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..2233bf89568f5988ed0f9c66cb31771420b42c41 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:80572/e16799f57f6dc22070bbc0d5d3d8e823197618ce956a4fc074075ce6fc2cee04/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:04.645482+00:00", + "files": { + "tensors.safetensors": "2c717bf7cf35afd3bab63502d1ace4cf6730e841456c3ad68f21b7c4e61d8aeb" + }, + "metadata": { + "created_at": "2026-08-03 05:12:33 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:80572", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "e16799f57f6dc22070bbc0d5d3d8e823197618ce956a4fc074075ce6fc2cee04", + "protein_id": "dynamicmpnn:train:single_chain:80572", + "sequence_sha256": "e16799f57f6dc22070bbc0d5d3d8e823197618ce956a4fc074075ce6fc2cee04", + "shape": [ + 245, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:80572", + "requested_modalities": [ + "single" + ], + "sequence": "ARSLLPLSTSLDHRSKEELHQDCLVLATAKHSSADVEERFHLGLFTDRATLYRMIDIEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDNLVAMAPAAGYHVWLWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSNHFYREAIAIAKARLRPEDPVLKDLYLSWGTVLERDGHYAVAAKCYLGATCAYDAAKVLAKKGDAASLRTAAELAAIVGEDELSASLALRCAQELL", + "sequence_sha256": "e16799f57f6dc22070bbc0d5d3d8e823197618ce956a4fc074075ce6fc2cee04" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 245, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:80970/a353b679af9a0f55add8465975cde038f4411504e279b4414f57c71b9615c0b7/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:80970/a353b679af9a0f55add8465975cde038f4411504e279b4414f57c71b9615c0b7/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..c494c5b9343af19082d3e80f7f6bd012ad9ff275 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:80970/a353b679af9a0f55add8465975cde038f4411504e279b4414f57c71b9615c0b7/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:00.029841+00:00", + "files": { + "tensors.safetensors": "c950c4ff7a743798f82244f7c13b9a44c4dfb0cdb573d1b4da5e4795af56d09b" + }, + "metadata": { + "created_at": "2026-08-03 04:20:49 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:80970", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "a353b679af9a0f55add8465975cde038f4411504e279b4414f57c71b9615c0b7", + "protein_id": "dynamicmpnn:train:single_chain:80970", + "sequence_sha256": "a353b679af9a0f55add8465975cde038f4411504e279b4414f57c71b9615c0b7", + "shape": [ + 321, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:80970", + "requested_modalities": [ + "single" + ], + "sequence": "XXXXXDAITSAASIGKDGTIYFGSDKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTEKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFGSDKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTEKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWRFKTNDAITSAASIGKDGTIYFGSDKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTEXX", + "sequence_sha256": "a353b679af9a0f55add8465975cde038f4411504e279b4414f57c71b9615c0b7" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 321, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:82044/ab4bbb11f742dc0350a1065a256e3777d411e4560a97d839096e1078621a06f5/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:82044/ab4bbb11f742dc0350a1065a256e3777d411e4560a97d839096e1078621a06f5/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..58e2bbfc3020ff31a5b1b4890b403cc64d48b9d4 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:82044/ab4bbb11f742dc0350a1065a256e3777d411e4560a97d839096e1078621a06f5/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:00.667979+00:00", + "files": { + "tensors.safetensors": "b3af140c5ff16eef8ccb0fdf7019c4619c742b695c088e85e6b990c0252e9a31" + }, + "metadata": { + "created_at": "2026-08-03 04:30:25 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:82044", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "alternate_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "ab4bbb11f742dc0350a1065a256e3777d411e4560a97d839096e1078621a06f5", + "protein_id": "dynamicmpnn:train:single_chain:82044", + "sequence_sha256": "ab4bbb11f742dc0350a1065a256e3777d411e4560a97d839096e1078621a06f5", + "shape": [ + 181, + 1024 + ], + "split": "test" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:82044", + "requested_modalities": [ + "single" + ], + "sequence": "XSIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMXX", + "sequence_sha256": "ab4bbb11f742dc0350a1065a256e3777d411e4560a97d839096e1078621a06f5" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 181, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:9857/56e8f2606edb47762d4fa21e85e2702713e255d50fd3f94432df8e6000d4c2a8/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:9857/56e8f2606edb47762d4fa21e85e2702713e255d50fd3f94432df8e6000d4c2a8/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..9222b5d398b694623260b2395d6657a96c9b18f9 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/dynamicmpnn:train:single_chain:9857/56e8f2606edb47762d4fa21e85e2702713e255d50fd3f94432df8e6000d4c2a8/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:54.786097+00:00", + "files": { + "tensors.safetensors": "3466c03387118a2f98bbf3c24a3309a1cebbd4b57cbaf86c29413c3f35484573" + }, + "metadata": { + "created_at": "2026-08-03 03:15:54 PM CDT", + "dataset_label": 1, + "dataset_row_id": "positive_examples:dynamicmpnn:train:single_chain:9857", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "condition_aware_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "56e8f2606edb47762d4fa21e85e2702713e255d50fd3f94432df8e6000d4c2a8", + "protein_id": "dynamicmpnn:train:single_chain:9857", + "sequence_sha256": "56e8f2606edb47762d4fa21e85e2702713e255d50fd3f94432df8e6000d4c2a8", + "shape": [ + 965, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "dynamicmpnn:train:single_chain:9857", + "requested_modalities": [ + "single" + ], + "sequence": "IMTDAFQTAESREVTGAQGFAPTEGESIVLSHNIQHQVALPPDLDYEYIPLSEHKPPAEPARTYSFKLDPFQALSVASIEREESVLVSAHTSAGKTVVAEYAIAQCLKKNQRVIYTSPIKALSNQKYRDFQAEFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKIRGVVWEETIILLPDKVRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPLQNYFFPAGGKGILLIVDEKGNFKENNFNQAMAMIEEKXEKADIAKIIKMILKKNFQPVIVFNFSKRECEQMALASSSMKFNAPDEENMVNKVFENALASLSEDDKNLPQISNILPLLRKGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFTQVTKWDGQQRRPLTSSEYIQMAGRAGRRGLDDRGIVIMMVDDKLEPETARAIVVGNQDKLNSAFHLGYNMVLNLLRIEAISPEYMLERCFFQFQNAASVPQLERELISLQQERDAIIIPDESIVKDYYGVRQQLEEYNKDMVFVIQHPQNCLGFFQEGRLIHIKSPSGVDYGWGVLIKHIQRQTPKNGQPPYPEQESYVLDVLLKVSGDFNPKTRGEGPMPEGIMPAGKDSKNARWEVVPCLLNCLRALGQLRVFLPKRLESADEKDGVGKAVDEISRRFPDGIPILDPMENMGINDDSFKKLLRKIEVLESRLVANPLHNSPLLVELWNQYSLKMQLGEQIKEKKKAIARAHSVAQLDELKSRKRVLRRLGFINDAEVVQMKARVACEISSTEGHELLLAELLFNRFFNELSPEICACILSCFIFDEKIETQALKEELAKPFREIQAQARIIAKVSAESKLDVNEDEYVQSLKWQLMETVLAWAQGRPFSEICKMTNVYEGSLIRLFRRLEELLRQMAEAARVMGSEELKDKFELSLSKIRRDIVSFNSLYL", + "sequence_sha256": "56e8f2606edb47762d4fa21e85e2702713e255d50fd3f94432df8e6000d4c2a8" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 965, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A090KS30/b7eb640b6dec21746dfd4f73a117198c020baa7e859621b519d767181777a22d/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A090KS30/b7eb640b6dec21746dfd4f73a117198c020baa7e859621b519d767181777a22d/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..1ed51fc8d0d6ad3c35c426be9530373046b8154f --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A090KS30/b7eb640b6dec21746dfd4f73a117198c020baa7e859621b519d767181777a22d/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:01.580464+00:00", + "files": { + "tensors.safetensors": "f59955b838afa1f2653b829f876ac0637735b0a9b400617874c545ee008ca176" + }, + "metadata": { + "created_at": "2026-08-03 04:40:01 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:A0A090KS30", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "b7eb640b6dec21746dfd4f73a117198c020baa7e859621b519d767181777a22d", + "protein_id": "rcsb:A0A090KS30", + "sequence_sha256": "b7eb640b6dec21746dfd4f73a117198c020baa7e859621b519d767181777a22d", + "shape": [ + 231, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:A0A090KS30", + "requested_modalities": [ + "single" + ], + "sequence": "MQQVIKDLFYVVPLSRNCEKIYKNKTHILLGISPFNSKFSQNYIHQLIDWSSKNFKNVTVLLAGDEAKNLLEALGTPTTKAERKVRKEIRRHFRFSEEALRKNGREIDIYTFSDFKNNKIYNEVYQNVIYYFEKDEKFRKSCLAMSHDALSSRAKSLNMEDIEITDNMLFHAVKYVLAELPFFLSGASILGYKESVLAYHRPWKLGEKIKNSEFYIKMSDNQGYIILKQIN", + "sequence_sha256": "b7eb640b6dec21746dfd4f73a117198c020baa7e859621b519d767181777a22d" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 231, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A0F7CMZ4/99b45a9f3b2c61a8ce6f74bdad65327515d79086c71af3b152ac262a2c241f88/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A0F7CMZ4/99b45a9f3b2c61a8ce6f74bdad65327515d79086c71af3b152ac262a2c241f88/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..03a3f4403594de9f97576c5129c08800af9fd094 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A0F7CMZ4/99b45a9f3b2c61a8ce6f74bdad65327515d79086c71af3b152ac262a2c241f88/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:59.311113+00:00", + "files": { + "tensors.safetensors": "5b111e51bf525c452415ca43e530f7f4a53629af06d0c8c78680976918bf51cb" + }, + "metadata": { + "created_at": "2026-08-03 04:09:35 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:A0A0F7CMZ4", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "99b45a9f3b2c61a8ce6f74bdad65327515d79086c71af3b152ac262a2c241f88", + "protein_id": "rcsb:A0A0F7CMZ4", + "sequence_sha256": "99b45a9f3b2c61a8ce6f74bdad65327515d79086c71af3b152ac262a2c241f88", + "shape": [ + 329, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:A0A0F7CMZ4", + "requested_modalities": [ + "single" + ], + "sequence": "MTDIDVPQVADPEVAAMVRAEVEGRWPLGVSGLDEVVRYGLVPFGKMMGPWLLIRSALAVGGDIATALPAAVALECVQVGAMMHDDIIDCDAQRRSKPAAHTVFGEPTAIVGGDGLFFHGFAALSECREAGAPAERVAQAFTVLSRAGLRIGSAALREIRMSREICSVQDYLDMIADKSGALLWMACGVGGTLGGADEAALKALSQYSDQLGIAYQIRDDLMAYDGTRAGKPNISDVRNGRPTLPVLLAHERAPREQQLRIERLLADTAAPAAERYKAMADLVGAYDGAQAAREVSHRHVQLATRALQTLPPSPHRDALEDLTVPGRLV", + "sequence_sha256": "99b45a9f3b2c61a8ce6f74bdad65327515d79086c71af3b152ac262a2c241f88" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 329, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A0H3MDW1/3f8f62d560956b7d2e2471f4c57d76d0075b3638fc23e10a4a3544104e816c63/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A0H3MDW1/3f8f62d560956b7d2e2471f4c57d76d0075b3638fc23e10a4a3544104e816c63/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..50f6b1f274faacdf5540176c5d66c7444259d707 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A0H3MDW1/3f8f62d560956b7d2e2471f4c57d76d0075b3638fc23e10a4a3544104e816c63/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:53.343193+00:00", + "files": { + "tensors.safetensors": "9cc04a19fe2c540ad7fde38e18e0c8d36331d0d2ef9116116fc3f1e737d3bc49" + }, + "metadata": { + "created_at": "2026-08-03 02:57:19 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:A0A0H3MDW1", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "3f8f62d560956b7d2e2471f4c57d76d0075b3638fc23e10a4a3544104e816c63", + "protein_id": "rcsb:A0A0H3MDW1", + "sequence_sha256": "3f8f62d560956b7d2e2471f4c57d76d0075b3638fc23e10a4a3544104e816c63", + "shape": [ + 227, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:A0A0H3MDW1", + "requested_modalities": [ + "single" + ], + "sequence": "MAGPKHVLLVSEHWDLFFQTKELLNPEEYRCTIGQQYKQELSADLVVCEYSLLPREIRSPKSLEGSFVLVLLDFFDEETSVDLLDRGFWYLIRPITPRILKSAISLFLSQHSLHSVPESIRFGPNVFYVLKLTVETPEGSVHLTPSESGILKRLLINKGQLCLRKHLLEEIKNHAKAIVARNVDVHIASLRKKLGAYGSRIVTLRGVGYLFSDDGDKKFSQQDTKLS", + "sequence_sha256": "3f8f62d560956b7d2e2471f4c57d76d0075b3638fc23e10a4a3544104e816c63" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 227, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A5P8YJX5/3391bbbcb406f58b03a20fd390e4731ed25a57456877f2ab02464d1f9249baab/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A5P8YJX5/3391bbbcb406f58b03a20fd390e4731ed25a57456877f2ab02464d1f9249baab/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..cd809df66004b96b72945c357b038198dc83391a --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A0A5P8YJX5/3391bbbcb406f58b03a20fd390e4731ed25a57456877f2ab02464d1f9249baab/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:52.343316+00:00", + "files": { + "tensors.safetensors": "641163dd7ebd60668c84c5dc0b88bc0b94486678ba3c247a718d8588a593b6f9" + }, + "metadata": { + "created_at": "2026-08-03 02:47:59 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:A0A5P8YJX5", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "3391bbbcb406f58b03a20fd390e4731ed25a57456877f2ab02464d1f9249baab", + "protein_id": "rcsb:A0A5P8YJX5", + "sequence_sha256": "3391bbbcb406f58b03a20fd390e4731ed25a57456877f2ab02464d1f9249baab", + "shape": [ + 119, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:A0A5P8YJX5", + "requested_modalities": [ + "single" + ], + "sequence": "MDIVFIEELSVITTIGVYDWEQTIQQKLVFDIEMGWDNRKAAGSDDVNDCLSYADISEAVIQHVGSQRFALVERVAEEVAELLLRRFNSPWVRIKVSKPGAVAQAKNVGVIIERGQRLS", + "sequence_sha256": "3391bbbcb406f58b03a20fd390e4731ed25a57456877f2ab02464d1f9249baab" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 119, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A3M142/3e733eab316cd67e9ea48406e75f4258d1c0ca8b9bc85bdcc601bc1f67ed6f26/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A3M142/3e733eab316cd67e9ea48406e75f4258d1c0ca8b9bc85bdcc601bc1f67ed6f26/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..4f160c3f326a8d2aa8248ffcd5bd67079c646e7b --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A3M142/3e733eab316cd67e9ea48406e75f4258d1c0ca8b9bc85bdcc601bc1f67ed6f26/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:53.210354+00:00", + "files": { + "tensors.safetensors": "faa940cf55a99e18f741997975cf36214ec9cebe3beae8c1983bf237d2b1cee3" + }, + "metadata": { + "created_at": "2026-08-03 02:55:24 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:A3M142", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "3e733eab316cd67e9ea48406e75f4258d1c0ca8b9bc85bdcc601bc1f67ed6f26", + "protein_id": "rcsb:A3M142", + "sequence_sha256": "3e733eab316cd67e9ea48406e75f4258d1c0ca8b9bc85bdcc601bc1f67ed6f26", + "shape": [ + 514, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:A3M142", + "requested_modalities": [ + "single" + ], + "sequence": "MQQLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLADAMYGEMIEFDGGLFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDGKGPIDAKLTDAVEKVAPGVIWRQSVDQPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKTAMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQYLAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSAEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDEATRKQLEHGQRVTELMKQKQYAPYSIADQAVSVYASNEGYMADVEVKKIVDFDAALIAYFRSEYAPLMKQIDETGDYNKDIEAAIKAGIESFKATQTY", + "sequence_sha256": "3e733eab316cd67e9ea48406e75f4258d1c0ca8b9bc85bdcc601bc1f67ed6f26" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 514, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A5CKD0/9b7a77a364f3d357886e685cc682f46c029a3a8d7f4652573717a833ba709fe5/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A5CKD0/9b7a77a364f3d357886e685cc682f46c029a3a8d7f4652573717a833ba709fe5/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..e184729d37f90fdbc0344eb9110ee8dfcf922350 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A5CKD0/9b7a77a364f3d357886e685cc682f46c029a3a8d7f4652573717a833ba709fe5/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:59.456887+00:00", + "files": { + "tensors.safetensors": "e3195c113938a14587b4cc60cdf0ffce6604c44dd63d175e93cf33ad402a7d3b" + }, + "metadata": { + "created_at": "2026-08-03 04:11:39 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:A5CKD0", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "9b7a77a364f3d357886e685cc682f46c029a3a8d7f4652573717a833ba709fe5", + "protein_id": "rcsb:A5CKD0", + "sequence_sha256": "9b7a77a364f3d357886e685cc682f46c029a3a8d7f4652573717a833ba709fe5", + "shape": [ + 470, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:A5CKD0", + "requested_modalities": [ + "single" + ], + "sequence": "MSKKYDAGVKEYRDTYWTPDYVPLDTDLLACFKCTGQEGVPKEEVAAAVAAESSTGTWSTVWSELLVDLDFYKGRCYRIEDVPGDKEAFYAFIAYPLDLFEEGSVTNVLTSLVGNVFGFKALRHLRLEDIRFPMAFIKTCPGPPNGICVERDRMNKYGRPLLGCTIKPKLGLSGKNYGRVVYECLRGGLDFTKDDENINSQPFQRWQNRFEFVAEAVALAQQETGEKKGHYLNCTAATPEEMYERAEFAKELGQPIIMHDYITGGFTANTGLSKWCRKNGMLLHIHRAMHAVIDRHPKHGIHFRVLAKCLRLSGGDQLHTGTVVGKLEGDRQTTLGFIDQLRESFIPEDRSRGNFFDQDWGSMPGVFAVASGGIHVWHMPALVAIFGDDSVLQFGGGTHGHPWGSAAGAAANRVALEACVKARNAGREIEKESRDILMEAAKHSPELAIALETWKEIKFEFDTVDKLDVQ", + "sequence_sha256": "9b7a77a364f3d357886e685cc682f46c029a3a8d7f4652573717a833ba709fe5" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 470, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A5HII2/25d4673d2d9464c7e8dda59283c910a797bdfba409c98918c620717dab58f0f6/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A5HII2/25d4673d2d9464c7e8dda59283c910a797bdfba409c98918c620717dab58f0f6/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..5a0f50a80b5a081a00b8c5f51cc986c13d0e217a --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A5HII2/25d4673d2d9464c7e8dda59283c910a797bdfba409c98918c620717dab58f0f6/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:51.136664+00:00", + "files": { + "tensors.safetensors": "840786d0520be042eb4924dfa305089fba17fc1879bf5f80ce7324ecf7abc0b5" + }, + "metadata": { + "created_at": "2026-08-03 02:33:38 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:A5HII2", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "25d4673d2d9464c7e8dda59283c910a797bdfba409c98918c620717dab58f0f6", + "protein_id": "rcsb:A5HII2", + "sequence_sha256": "25d4673d2d9464c7e8dda59283c910a797bdfba409c98918c620717dab58f0f6", + "shape": [ + 380, + 1024 + ], + "split": "test" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:A5HII2", + "requested_modalities": [ + "single" + ], + "sequence": "MGSPKSFLSMSLLFFSTLLVLSLAFNAKNLTKRTNDELKAMYESWLTKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYRVGLNQFADQTNEEFQSTYLGFTSGSNKMKVSNRYEPRVGQVLPDYVDWRSAGAVVDIKSQGQCGSCWAFSAIATVEGINKIVTGDLISLSEQELVDCGRTQNTRGCDGGSITDGFQFIINNGGINTEANYPYTAEDGQCNLDLQNEKYASIDTYENVPYNNEWALQTAVAYQPVSVALEAAGDAFQHYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYIRILRNVGGAGTCGIATKPSYPVKYNNQNHPKPYSSLINPPTFSMSKDSLVGVDDGQRSST", + "sequence_sha256": "25d4673d2d9464c7e8dda59283c910a797bdfba409c98918c620717dab58f0f6" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 380, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A8MSB8/e1cc33e5a237b53a28cc0732bd25757f47fb607d138d6e7dc9b8bda86070dcd3/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A8MSB8/e1cc33e5a237b53a28cc0732bd25757f47fb607d138d6e7dc9b8bda86070dcd3/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..058b6afe8abe8be11e169b410e9f5f0ab8e966e6 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A8MSB8/e1cc33e5a237b53a28cc0732bd25757f47fb607d138d6e7dc9b8bda86070dcd3/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:04.778657+00:00", + "files": { + "tensors.safetensors": "6b4ce73eed0ea80067aefc9942d90b13e435e569e8eeda03517a45c155415af3" + }, + "metadata": { + "created_at": "2026-08-03 05:12:52 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:A8MSB8", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "e1cc33e5a237b53a28cc0732bd25757f47fb607d138d6e7dc9b8bda86070dcd3", + "protein_id": "rcsb:A8MSB8", + "sequence_sha256": "e1cc33e5a237b53a28cc0732bd25757f47fb607d138d6e7dc9b8bda86070dcd3", + "shape": [ + 56, + 1024 + ], + "split": "test" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:A8MSB8", + "requested_modalities": [ + "single" + ], + "sequence": "MNWVQRKIYLYNVTFGLYMLDWWERYLFNSLVVVLMWFVLYNGTRYFSELFQRHLT", + "sequence_sha256": "e1cc33e5a237b53a28cc0732bd25757f47fb607d138d6e7dc9b8bda86070dcd3" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 56, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A8MUM7/732f7562d4d7f7e3ead771ccbb77c33f50990e292db88e4c63c021db2dd0f42a/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A8MUM7/732f7562d4d7f7e3ead771ccbb77c33f50990e292db88e4c63c021db2dd0f42a/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..62d744c73f26fd47e6fb7560d739c9b95d38681b --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:A8MUM7/732f7562d4d7f7e3ead771ccbb77c33f50990e292db88e4c63c021db2dd0f42a/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:56.863790+00:00", + "files": { + "tensors.safetensors": "8e631a6d41eff30cfa049e8c2a88fe16649f598cb22fc151c03de331768bcbcf" + }, + "metadata": { + "created_at": "2026-08-03 03:40:22 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:A8MUM7", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "732f7562d4d7f7e3ead771ccbb77c33f50990e292db88e4c63c021db2dd0f42a", + "protein_id": "rcsb:A8MUM7", + "sequence_sha256": "732f7562d4d7f7e3ead771ccbb77c33f50990e292db88e4c63c021db2dd0f42a", + "shape": [ + 142, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:A8MUM7", + "requested_modalities": [ + "single" + ], + "sequence": "MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGRRVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYEVKVNGEYIYAFVHRIPPSYVKMIQVWRDVSLDSVLVNNGRR", + "sequence_sha256": "732f7562d4d7f7e3ead771ccbb77c33f50990e292db88e4c63c021db2dd0f42a" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 142, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B1IVJ9/0d5854347cd6d5cfa2c369fa501703ffa001a96e0c870088e8499d064f3f509e/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B1IVJ9/0d5854347cd6d5cfa2c369fa501703ffa001a96e0c870088e8499d064f3f509e/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..f99a9fabd253a721c130f66b116a6ff7aa6aaae2 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B1IVJ9/0d5854347cd6d5cfa2c369fa501703ffa001a96e0c870088e8499d064f3f509e/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:49.506582+00:00", + "files": { + "tensors.safetensors": "27f806ca584604b67cb026aac93e9f182be00d39c85a72e51ef8574a7fdcce5b" + }, + "metadata": { + "created_at": "2026-08-03 02:14:29 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:B1IVJ9", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "0d5854347cd6d5cfa2c369fa501703ffa001a96e0c870088e8499d064f3f509e", + "protein_id": "rcsb:B1IVJ9", + "sequence_sha256": "0d5854347cd6d5cfa2c369fa501703ffa001a96e0c870088e8499d064f3f509e", + "shape": [ + 325, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:B1IVJ9", + "requested_modalities": [ + "single" + ], + "sequence": "MNALTAVHNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQPLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ", + "sequence_sha256": "0d5854347cd6d5cfa2c369fa501703ffa001a96e0c870088e8499d064f3f509e" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 325, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B4DMD5/e0ab9ba66248d4c77f3e3c9aac57f2988651a310351418b6b3dd18b740c6a15d/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B4DMD5/e0ab9ba66248d4c77f3e3c9aac57f2988651a310351418b6b3dd18b740c6a15d/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..e3a714ca76457376f4d64bf6f91659f7012be163 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B4DMD5/e0ab9ba66248d4c77f3e3c9aac57f2988651a310351418b6b3dd18b740c6a15d/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:04.446379+00:00", + "files": { + "tensors.safetensors": "da7a7320b61a95b954ecd638fe85259e342d800f2e4981a7785d802f764c7dfe" + }, + "metadata": { + "created_at": "2026-08-03 05:12:02 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:B4DMD5", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "e0ab9ba66248d4c77f3e3c9aac57f2988651a310351418b6b3dd18b740c6a15d", + "protein_id": "rcsb:B4DMD5", + "sequence_sha256": "e0ab9ba66248d4c77f3e3c9aac57f2988651a310351418b6b3dd18b740c6a15d", + "shape": [ + 622, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:B4DMD5", + "requested_modalities": [ + "single" + ], + "sequence": "MLPGLALLLLAAWTARALEVPTDGNAGLLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVRVPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAVNERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN", + "sequence_sha256": "e0ab9ba66248d4c77f3e3c9aac57f2988651a310351418b6b3dd18b740c6a15d" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 622, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B5YBJ6/9a311ec3e1e4d5bd8d66af9f2ad06c94ec1d17a62d460170a00c4c95c958a228/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B5YBJ6/9a311ec3e1e4d5bd8d66af9f2ad06c94ec1d17a62d460170a00c4c95c958a228/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..9f8f93d29e50bd38e8aad7dfb25625f69cc02e8e --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B5YBJ6/9a311ec3e1e4d5bd8d66af9f2ad06c94ec1d17a62d460170a00c4c95c958a228/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:59.353956+00:00", + "files": { + "tensors.safetensors": "d89c7f2655749bc238ff98b03019927f89267dc9768e1870356e8b7284306e79" + }, + "metadata": { + "created_at": "2026-08-03 04:09:56 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:B5YBJ6", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "9a311ec3e1e4d5bd8d66af9f2ad06c94ec1d17a62d460170a00c4c95c958a228", + "protein_id": "rcsb:B5YBJ6", + "sequence_sha256": "9a311ec3e1e4d5bd8d66af9f2ad06c94ec1d17a62d460170a00c4c95c958a228", + "shape": [ + 369, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:B5YBJ6", + "requested_modalities": [ + "single" + ], + "sequence": "MNAKKYFKFLPLVLILLLFCGCAPDGKLKWIFETRYCVDSSPAIGQDGTIYVGSMDHYLYAINPDGTLKWKFKTGGSVHSSPAIGQDGTIYVGSNDHYLYKISPYGILKWKFKTGRAVLSSPAIGQDGTIYVGSMDHYLYAINPDGTLKWKFKTGGSVHSSPAIGQDGTIYVGSDDHYLYAINPNGKLKWKFETGRPVHSSPAIGQDGTIYVGSMDHYLYAINPDGTLKWKFKTGGSVHSSPAIGQDGTIYVGSLDDYLYAINPDGKLKWKFETGSWVDSSPAIGQDGTVYVGSGNHLYAINPDGTLKWKFETGYCVDSSPAIGQDGTIYVGSGSYDNYLYAINSKSKGLANSPWPKFRHDNQNTGRVK", + "sequence_sha256": "9a311ec3e1e4d5bd8d66af9f2ad06c94ec1d17a62d460170a00c4c95c958a228" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 369, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B8I0Y7/96c98125f835ed131b6a217430c3fd959b9893142a7b0a23d4c2418a21618528/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B8I0Y7/96c98125f835ed131b6a217430c3fd959b9893142a7b0a23d4c2418a21618528/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..e80e51d3fa8493a52e2cac5d10191495e16df785 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:B8I0Y7/96c98125f835ed131b6a217430c3fd959b9893142a7b0a23d4c2418a21618528/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:59.110252+00:00", + "files": { + "tensors.safetensors": "a5ea634d08750ca19b438db3c22d594c725c8a1392d3fa6c552fa0fef1570277" + }, + "metadata": { + "created_at": "2026-08-03 04:08:22 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:B8I0Y7", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "96c98125f835ed131b6a217430c3fd959b9893142a7b0a23d4c2418a21618528", + "protein_id": "rcsb:B8I0Y7", + "sequence_sha256": "96c98125f835ed131b6a217430c3fd959b9893142a7b0a23d4c2418a21618528", + "shape": [ + 309, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:B8I0Y7", + "requested_modalities": [ + "single" + ], + "sequence": "MLLDTFQGYNCYSSALGEYAKQKNIDQVENIILSQWSFFFDEEQFYKNQWYTGAADGPVDVVLNEDLRNFANIEVLEHISSESQAIDEGRKVLEKHGLQIVLMDFYYMNSFNWKSLSRFNVTREHDPHFAVLTQINENSVHIIDPYYHHEENMSMEDFIKSRNSMTKQGKISFNSYEIFSNGTKKSNIKELLYYRFNRYLQEKMFGKITQFGQVVKKQLDNKDRKWAFTGYNCLNSVVYQHQNLINLQKKFSLEMPPNLQELLDNWALIRKKLFEYYSRGSYNTEEISNLICKVASSEEQFAQEVLKVL", + "sequence_sha256": "96c98125f835ed131b6a217430c3fd959b9893142a7b0a23d4c2418a21618528" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 309, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:E7FRT5/8d66e644ef80bea774842a06bdbac168b6e2a434d47d416fd72dc45a2c2057c4/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:E7FRT5/8d66e644ef80bea774842a06bdbac168b6e2a434d47d416fd72dc45a2c2057c4/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..6559fddcd64943e1147ea81fd76a66e145292c85 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:E7FRT5/8d66e644ef80bea774842a06bdbac168b6e2a434d47d416fd72dc45a2c2057c4/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:58.586518+00:00", + "files": { + "tensors.safetensors": "fd3a43f3a8abd5c5160b48f39012ff90040c3cb9ec53b5d1905fb4bc0f5a9229" + }, + "metadata": { + "created_at": "2026-08-03 04:01:41 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:E7FRT5", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "8d66e644ef80bea774842a06bdbac168b6e2a434d47d416fd72dc45a2c2057c4", + "protein_id": "rcsb:E7FRT5", + "sequence_sha256": "8d66e644ef80bea774842a06bdbac168b6e2a434d47d416fd72dc45a2c2057c4", + "shape": [ + 507, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:E7FRT5", + "requested_modalities": [ + "single" + ], + "sequence": "MKNHKKLRNALATLLLALPLALQGAVGVKTAQAAETSTETATVTLHKYVFDKSLPSDKIDNSKSQDEINAWLTKNNAEALDGVEFTAYDVTSEYADAYKTATGDKNESPADAAKTASAAVAKKADALQKTATVVGKQTTANGGLASFANLPLRDANGNYKAYLFAETDAPANITQKAEPFVLAMPIYGADGKTVQKSINIYPKNVKQSDKKTLNDNRSHHDFTAGEKINYSIETVVPWNIANKKVYTITDNPSKGLIMDADTIQIEGLASNKYTVKKNADNGFTITIPAANLAAFAGKTLKTTVKGHLSIEDLTLIDTGIPNKATAKVDNEAHHEVKSEEVFTGGKKFVKVDGSNQSKTLAGAQFQLVIVKNGQVVKYAHGNEKDGYTFDTNNTNVATKTTGENGQFEFAGLKYSESLEAGESYAVKEVKAPTGYDLLKDPVLFTVTKDSYKTVQAADGQKISNTKKGGFLPSTGGMGIVLFIAAGVVVMAGAAGTMIVRRNRRENI", + "sequence_sha256": "8d66e644ef80bea774842a06bdbac168b6e2a434d47d416fd72dc45a2c2057c4" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 507, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G0WVH3/a0e4c091d1ac96ce66c8233e1edc53fc1413f0ea6796aee05b9719bb2837d8e4/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G0WVH3/a0e4c091d1ac96ce66c8233e1edc53fc1413f0ea6796aee05b9719bb2837d8e4/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..a6b548887bcc71805d508c1d6721a117ceceb944 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G0WVH3/a0e4c091d1ac96ce66c8233e1edc53fc1413f0ea6796aee05b9719bb2837d8e4/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:59.826480+00:00", + "files": { + "tensors.safetensors": "1adbf4f88fa140eae569be4280b14028d033b24aebd6c868f1f981d678c23a02" + }, + "metadata": { + "created_at": "2026-08-03 04:18:42 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:G0WVH3", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "a0e4c091d1ac96ce66c8233e1edc53fc1413f0ea6796aee05b9719bb2837d8e4", + "protein_id": "rcsb:G0WVH3", + "sequence_sha256": "a0e4c091d1ac96ce66c8233e1edc53fc1413f0ea6796aee05b9719bb2837d8e4", + "shape": [ + 547, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:G0WVH3", + "requested_modalities": [ + "single" + ], + "sequence": "MFKQSIHQLFETQVERTPEAVAVLSEQGQLTYEELNTKANQLAHYLRTLGVKSETLVGVCVDRSLEMVIGLLAILKAGGAYVPLDPTYPRERLTYMVQDAQISVLVTQTQWSNLISDYQGQVICLDSQWAKIASYSQENLVNTVNPENLAYVIYTSGSTGKPKGVMIEHQSLVNFTKLAIAQYQITTSDRTLQFVSISFDVAAEEIYVTLCSGATLILRTEEMISSIPSFVQKSQDWQITVWSLPTAYWHLLVNELVKSKIALPDSLRLVIIGGERVQPELVRMWFKNVGNFPELINVYGPTEGTIAVSLCRLSQLTESQRNRTEIPIGKSLGENISVYVLDETLKTVPPETPGEIYIGGTALARGYLNRPELTAQKFIQDPFSPSERLYKTGDLGRYLADGNLEYLGRVDHQVKINGFRVELGEIETVLLQHHQVAQAVVIDREDPLGNKRLVAYLVPHSTEENLTVTLQQFLKNKLPSYMIPATFVVLNELPLSPNGKIDRKALPIPDYDGNERQTPFIAPRNHQEEKLANIWHQVFGLEKIGVN", + "sequence_sha256": "a0e4c091d1ac96ce66c8233e1edc53fc1413f0ea6796aee05b9719bb2837d8e4" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 547, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G1K3R9/acfe31c2dda10d7855c4b02aec3087b66aab89094a92ada5f04038dda75f218a/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G1K3R9/acfe31c2dda10d7855c4b02aec3087b66aab89094a92ada5f04038dda75f218a/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..4e5405a24b442811bcfd950f49a80cd9b5ee3a8d --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G1K3R9/acfe31c2dda10d7855c4b02aec3087b66aab89094a92ada5f04038dda75f218a/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:00.822647+00:00", + "files": { + "tensors.safetensors": "c0eec8d27df1d250e01ab4aab857232db52f9da2584296b4659f143b1f1ec146" + }, + "metadata": { + "created_at": "2026-08-03 04:32:33 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:G1K3R9", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "acfe31c2dda10d7855c4b02aec3087b66aab89094a92ada5f04038dda75f218a", + "protein_id": "rcsb:G1K3R9", + "sequence_sha256": "acfe31c2dda10d7855c4b02aec3087b66aab89094a92ada5f04038dda75f218a", + "shape": [ + 227, + 1024 + ], + "split": "val" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:G1K3R9", + "requested_modalities": [ + "single" + ], + "sequence": "TKTGYINAAFRSSRNNEAYLFINDKYVLLDYAPGTSNDKVLYGPSFVRDGYKSLAKTIFGTYGIDCSFDTEYNEAFIFYENFCARIDYAPHSDKDKIISGPKKIADMFPFFKGTVFENGIDAAFRSTKGKEVYLFKGDKYARIDYLTNRLVQNIKSISDGFPCLRGTIFEAGMDSAFASHKTNEAYLFKGEYYARINFTPGSTNDIMGGVKKTLDYWPSLRGIIPLE", + "sequence_sha256": "acfe31c2dda10d7855c4b02aec3087b66aab89094a92ada5f04038dda75f218a" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 227, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G1UBC6/b786ce06dad1a00f18848d0b18fd1df72c045cc9aaaa96a5808c9e2fac2a806b/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G1UBC6/b786ce06dad1a00f18848d0b18fd1df72c045cc9aaaa96a5808c9e2fac2a806b/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..c39117cfac594d69238918a9c4b82309169c7e79 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G1UBC6/b786ce06dad1a00f18848d0b18fd1df72c045cc9aaaa96a5808c9e2fac2a806b/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:01.570503+00:00", + "files": { + "tensors.safetensors": "fe5d3135552f3271dd6ba79896e1a5c92cc9243c16e6f21311b2b28eccab4029" + }, + "metadata": { + "created_at": "2026-08-03 04:39:59 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:G1UBC6", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "b786ce06dad1a00f18848d0b18fd1df72c045cc9aaaa96a5808c9e2fac2a806b", + "protein_id": "rcsb:G1UBC6", + "sequence_sha256": "b786ce06dad1a00f18848d0b18fd1df72c045cc9aaaa96a5808c9e2fac2a806b", + "shape": [ + 540, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:G1UBC6", + "requested_modalities": [ + "single" + ], + "sequence": "MRDTMNEKHCYSLLAAGLIAAVPQLAAAHGGTHDVTAVAHLSYSEAYSEKLKKGQEVGTELLVLDGRFEFNEHVGMGDITPDTTWSAVVQGQTLATGTLGDATKKKFGAKGGMAVINVPGGGTLKFTWNAKAIMLKLKWTGEPALARLYKDQNTSINLPQFPVDIAIGSLHGYFNVPVTGQAKATTKNGTMLSKIALKGTANSAGLDTLDRDGDGSTADADCNDFAPTIHPGAAEATLDGVDSNCDGRDSGVAEVVETFKNPGTYSSPVINFKIASPPGPGTPIYGPPRDFSGYNKSYSLAIGKTSYYDPTTGTKWNDDTITPVSDGQDIWRGWTHTGKWSFFNGKAGDKITLSVQRDAQEASLKGAHPGFILFWRPEGGPLFWAGTQDLDEGQTALPADSDTVIGHVIVQHADWTLQGLPPKADHTAPAGVDTELYPMKPDSYTMYYVDSGYDADKYVASKKLIMHPTAFKGLALNDGTAGAFTKSITLPKTGYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNITISKP", + "sequence_sha256": "b786ce06dad1a00f18848d0b18fd1df72c045cc9aaaa96a5808c9e2fac2a806b" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 540, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G3I1H5/87c8bfac82fc604974aada11deaed4a0a065bd576aed32cac6580f6cab91e9d4/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G3I1H5/87c8bfac82fc604974aada11deaed4a0a065bd576aed32cac6580f6cab91e9d4/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..629e9f9f151ece440db32e665ae50f53c67d66e3 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:G3I1H5/87c8bfac82fc604974aada11deaed4a0a065bd576aed32cac6580f6cab91e9d4/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:58.239520+00:00", + "files": { + "tensors.safetensors": "7e53bd3f1253c1f3ebd26ef2dbffa62e10bf629e880c9ff2d382bb9161cf1901" + }, + "metadata": { + "created_at": "2026-08-03 03:58:21 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:G3I1H5", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "87c8bfac82fc604974aada11deaed4a0a065bd576aed32cac6580f6cab91e9d4", + "protein_id": "rcsb:G3I1H5", + "sequence_sha256": "87c8bfac82fc604974aada11deaed4a0a065bd576aed32cac6580f6cab91e9d4", + "shape": [ + 438, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:G3I1H5", + "requested_modalities": [ + "single" + ], + "sequence": "MCRMIWKAAVLLSLALGAGALAVGVDDPEDAGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGTDVYAGVLKDYTGEDVTPENFLAVLRGDAEAVKGKGSGKVLRSGPQDHVFVYFTDHGATGLLVFPNEDLHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNHLPNDINVYATTAANPHESSYACYYDEERNTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNTSHVMQYGNKSISTMKVMQFQGMKHSTSSPISLPPVTRLDLTPSPEVPLTILKRKLMSTNDLKQSQNLVGQIQRLLDARHVIEKSVHKIVSLLAGFGETAERLLSERAVLMAHDCYQEAVTHFRTHCFNWHSPTYEYALRHLYVLANLCEKPYPIDRIKMAMDKVCLSHY", + "sequence_sha256": "87c8bfac82fc604974aada11deaed4a0a065bd576aed32cac6580f6cab91e9d4" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 438, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O32218/6ffe28d96a9d1c44bc12d27c315ab17510d9730e9eed1fe95bd7cdf1fb4f6637/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O32218/6ffe28d96a9d1c44bc12d27c315ab17510d9730e9eed1fe95bd7cdf1fb4f6637/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..bae426a88c224e469a25d571f129a80d9f6dca54 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O32218/6ffe28d96a9d1c44bc12d27c315ab17510d9730e9eed1fe95bd7cdf1fb4f6637/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:56.664469+00:00", + "files": { + "tensors.safetensors": "e5d1fffe97d0e61d8788e298902ded453e6de10a5df51161260e4b94cc620c33" + }, + "metadata": { + "created_at": "2026-08-03 03:38:51 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:O32218", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "6ffe28d96a9d1c44bc12d27c315ab17510d9730e9eed1fe95bd7cdf1fb4f6637", + "protein_id": "rcsb:O32218", + "sequence_sha256": "6ffe28d96a9d1c44bc12d27c315ab17510d9730e9eed1fe95bd7cdf1fb4f6637", + "shape": [ + 222, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:O32218", + "requested_modalities": [ + "single" + ], + "sequence": "MKKKQQSSAKFAVILTVVVVVLLAAIVIINNKTEQGNDAVSGQPSIKGQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYVNDKVIKNFADYDEIKETIEKELKGK", + "sequence_sha256": "6ffe28d96a9d1c44bc12d27c315ab17510d9730e9eed1fe95bd7cdf1fb4f6637" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 222, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O58832/ca4a8b52b99254728b8870e0ce46b4710d92fe1e392b896ea180ac33554fe62e/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O58832/ca4a8b52b99254728b8870e0ce46b4710d92fe1e392b896ea180ac33554fe62e/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..4dae93a110b083a5721e29e61ff012db877b1eb4 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O58832/ca4a8b52b99254728b8870e0ce46b4710d92fe1e392b896ea180ac33554fe62e/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:02.947756+00:00", + "files": { + "tensors.safetensors": "6891fed1dec14a89ccbbbf735f5673ab6a69ce97eb54aee11ef63e0c7bbe1d06" + }, + "metadata": { + "created_at": "2026-08-03 04:54:21 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:O58832", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "ca4a8b52b99254728b8870e0ce46b4710d92fe1e392b896ea180ac33554fe62e", + "protein_id": "rcsb:O58832", + "sequence_sha256": "ca4a8b52b99254728b8870e0ce46b4710d92fe1e392b896ea180ac33554fe62e", + "shape": [ + 342, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:O58832", + "requested_modalities": [ + "single" + ], + "sequence": "MLHEIPKSEILKELKRIGAKRVLIQSPEGLRREAEELAGFLEENNIEVFLHGEINYGACDPADREAKLVGCDALIHLGHSYMKLPLEVPTIFVPAFARVSVVEALKENIGEIKKLGRKIIVTTTAQHIHQLKEAKEFLESEGFEVSIGRGDSRISWPGQVLGCNYSVAKVRGEGILFIGSGIFHPLGLAVATRKKVLAIDPYTKAFSWIDPERFIRKRWAQIAKAMDAKKFGVIVSIKKGQLRLAEAKRIVKLLKKHGREARLIVMNDVNYHKLEGFPFEAYVVVACPRVPLDDYGAWRKPVLTPKEVEILLGLREEYEFDEILGGPRESDEPFGISIHSTR", + "sequence_sha256": "ca4a8b52b99254728b8870e0ce46b4710d92fe1e392b896ea180ac33554fe62e" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 342, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O93655/46f13af425d1a0c1f2cbf6ec602a3ff97d6eefafa4c165a6e2d999cfcccfe788/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O93655/46f13af425d1a0c1f2cbf6ec602a3ff97d6eefafa4c165a6e2d999cfcccfe788/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..1ed0868e365ebc62ed3f829fe684b526089f1445 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O93655/46f13af425d1a0c1f2cbf6ec602a3ff97d6eefafa4c165a6e2d999cfcccfe788/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:53.841364+00:00", + "files": { + "tensors.safetensors": "477fd3f4c00c7435a0510bc06462d344ff7b1f84c9914520f139171c1a8f808c" + }, + "metadata": { + "created_at": "2026-08-03 03:04:05 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:O93655", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "46f13af425d1a0c1f2cbf6ec602a3ff97d6eefafa4c165a6e2d999cfcccfe788", + "protein_id": "rcsb:O93655", + "sequence_sha256": "46f13af425d1a0c1f2cbf6ec602a3ff97d6eefafa4c165a6e2d999cfcccfe788", + "shape": [ + 780, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:O93655", + "requested_modalities": [ + "single" + ], + "sequence": "MEVEKYDLTLDFDIQKRTFNGTETITADAGDIVLDAVGLQINWMKVNGRDTAFTYDGQTVRAPGDSQPQKIEISFAGKVSDSLSGIYYAGRENGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPPKRIEVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYRDIDLILASLKDIRSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFREIYMDIAENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNGEEEGRWPVPVNIKKKDGVERILLEDEASIEADGLIKINADSAGFYRVLYDDATFSDVMGHYRDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRMLTHAFDDDARAFCRSRMQFLTGKQDENLKIALGRVSRLYVMVDESYAEEMSKLFKDFDSAEPEMRSSIATAYALVTGDLKGLLEKFRSVDRDEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRTVEMMIPVIGLDHPDAEDIVRNIGSKNISMGLAKGIEMLAVNRKLVERIRQTAVK", + "sequence_sha256": "46f13af425d1a0c1f2cbf6ec602a3ff97d6eefafa4c165a6e2d999cfcccfe788" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 780, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O94817/340204569cc59ad9840cb3936c84530acb35837deb0e87a34136398a1a80a23e/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O94817/340204569cc59ad9840cb3936c84530acb35837deb0e87a34136398a1a80a23e/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..6b6c316f70acb4bf85f627f6ccd458da302a2d47 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:O94817/340204569cc59ad9840cb3936c84530acb35837deb0e87a34136398a1a80a23e/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:52.359419+00:00", + "files": { + "tensors.safetensors": "8c81072da6a569c4e6e30a7a4950623d3bec10262ff79d80d2fc49ba498ee5ac" + }, + "metadata": { + "created_at": "2026-08-03 02:48:09 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:O94817", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "340204569cc59ad9840cb3936c84530acb35837deb0e87a34136398a1a80a23e", + "protein_id": "rcsb:O94817", + "sequence_sha256": "340204569cc59ad9840cb3936c84530acb35837deb0e87a34136398a1a80a23e", + "shape": [ + 140, + 1024 + ], + "split": "test" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:O94817", + "requested_modalities": [ + "single" + ], + "sequence": "MAEEPQSVLQLPTSIAAGGEGLTDVSPETTTPEPPSSAAVSPGTEEPAGDTKKKIDILLKAVGDTPIMKTKKWAVERTRTIQGLIDFIKKFLKLVASEQLFIYVNQSFAPSPDQEVGTLYECFGSDGKLVLHYCKSQAWG", + "sequence_sha256": "340204569cc59ad9840cb3936c84530acb35837deb0e87a34136398a1a80a23e" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 140, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P00883/c914da2418e4f7c204592ebae2c00946434d37f385b333fb973c0b24134c5b04/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P00883/c914da2418e4f7c204592ebae2c00946434d37f385b333fb973c0b24134c5b04/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..2f3f11194700220a1884d13fe61093a34a2ecfba --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P00883/c914da2418e4f7c204592ebae2c00946434d37f385b333fb973c0b24134c5b04/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:02.816012+00:00", + "files": { + "tensors.safetensors": "f41b736ee873b29c53fb155421cdccea0e3a40d660a2104eeef41596b33231ac" + }, + "metadata": { + "created_at": "2026-08-03 04:52:52 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:P00883", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "c914da2418e4f7c204592ebae2c00946434d37f385b333fb973c0b24134c5b04", + "protein_id": "rcsb:P00883", + "sequence_sha256": "c914da2418e4f7c204592ebae2c00946434d37f385b333fb973c0b24134c5b04", + "shape": [ + 364, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:P00883", + "requested_modalities": [ + "single" + ], + "sequence": "MPHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY", + "sequence_sha256": "c914da2418e4f7c204592ebae2c00946434d37f385b333fb973c0b24134c5b04" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 364, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P04418/50fba1fb2d9133329518275973e5e07134fa8d91b451825e785ad5bb79d9f90f/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P04418/50fba1fb2d9133329518275973e5e07134fa8d91b451825e785ad5bb79d9f90f/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..c89c342ba91e8a030fdd8bf14b985f9daa76a931 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P04418/50fba1fb2d9133329518275973e5e07134fa8d91b451825e785ad5bb79d9f90f/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:54.383866+00:00", + "files": { + "tensors.safetensors": "b91b49bc2f98776926688bd0789d30f330c0b10444b7ed299b6a8c21e90af6ab" + }, + "metadata": { + "created_at": "2026-08-03 03:10:29 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:P04418", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "50fba1fb2d9133329518275973e5e07134fa8d91b451825e785ad5bb79d9f90f", + "protein_id": "rcsb:P04418", + "sequence_sha256": "50fba1fb2d9133329518275973e5e07134fa8d91b451825e785ad5bb79d9f90f", + "shape": [ + 138, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:P04418", + "requested_modalities": [ + "single" + ], + "sequence": "MTRINLTLVSELADQHLMAEYRELPRVFGAVRKHVANGKRVRDFKISPTFILGAGHVTFFYDKLEFLRKRQIELIAECLKRGFNIKDTTVQDISDIPQEFRGDYIPHEASIAISQARLDEKIAQRPTWYKYYGKAIYA", + "sequence_sha256": "50fba1fb2d9133329518275973e5e07134fa8d91b451825e785ad5bb79d9f90f" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 138, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P05109/5fb519363e7cef5984f83bfc1945fda06e6fc813339348ae7e3b28829df1ad5a/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P05109/5fb519363e7cef5984f83bfc1945fda06e6fc813339348ae7e3b28829df1ad5a/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..dc1377833e767208402a9c33e7171382554542a6 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P05109/5fb519363e7cef5984f83bfc1945fda06e6fc813339348ae7e3b28829df1ad5a/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:55.462963+00:00", + "files": { + "tensors.safetensors": "73b5dded711bf758ee8541cb30f0e384f299345d284fd07eec9768166783bce9" + }, + "metadata": { + "created_at": "2026-08-03 03:24:45 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:P05109", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "5fb519363e7cef5984f83bfc1945fda06e6fc813339348ae7e3b28829df1ad5a", + "protein_id": "rcsb:P05109", + "sequence_sha256": "5fb519363e7cef5984f83bfc1945fda06e6fc813339348ae7e3b28829df1ad5a", + "shape": [ + 93, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:P05109", + "requested_modalities": [ + "single" + ], + "sequence": "MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGVAAHKKSHEESHKE", + "sequence_sha256": "5fb519363e7cef5984f83bfc1945fda06e6fc813339348ae7e3b28829df1ad5a" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 93, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P06312/88a2bde9343dabc2a1d566fed0f4d8d20fbb0502fb9e9159d3a1075444ba4bfb/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P06312/88a2bde9343dabc2a1d566fed0f4d8d20fbb0502fb9e9159d3a1075444ba4bfb/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..975729f3d9c2b4dbb6d0f58a815b56f4c06449cc --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P06312/88a2bde9343dabc2a1d566fed0f4d8d20fbb0502fb9e9159d3a1075444ba4bfb/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:58.320361+00:00", + "files": { + "tensors.safetensors": "11484693a99a241a3dd6663b54b7e82cd00754ca5bb60a9566860b8b199d673d" + }, + "metadata": { + "created_at": "2026-08-03 03:58:53 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:P06312", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "88a2bde9343dabc2a1d566fed0f4d8d20fbb0502fb9e9159d3a1075444ba4bfb", + "protein_id": "rcsb:P06312", + "sequence_sha256": "88a2bde9343dabc2a1d566fed0f4d8d20fbb0502fb9e9159d3a1075444ba4bfb", + "shape": [ + 121, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:P06312", + "requested_modalities": [ + "single" + ], + "sequence": "MVLQTQVFISLLLWISGAYGDIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTP", + "sequence_sha256": "88a2bde9343dabc2a1d566fed0f4d8d20fbb0502fb9e9159d3a1075444ba4bfb" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 121, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P06575/ecfc9838683f2dce14aa974e075e896f8354c5d0d3247b965f75bccbdc01a710/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P06575/ecfc9838683f2dce14aa974e075e896f8354c5d0d3247b965f75bccbdc01a710/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..c3b7a9f2535199e7b49246765af1cdbb7089ae18 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P06575/ecfc9838683f2dce14aa974e075e896f8354c5d0d3247b965f75bccbdc01a710/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:11:05.513455+00:00", + "files": { + "tensors.safetensors": "f7dd3742aacb5b1b7ce854a0eccf10d8eccce3e81d8e9e5881335085adc6436d" + }, + "metadata": { + "created_at": "2026-08-03 05:18:13 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:P06575", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "ecfc9838683f2dce14aa974e075e896f8354c5d0d3247b965f75bccbdc01a710", + "protein_id": "rcsb:P06575", + "sequence_sha256": "ecfc9838683f2dce14aa974e075e896f8354c5d0d3247b965f75bccbdc01a710", + "shape": [ + 370, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:P06575", + "requested_modalities": [ + "single" + ], + "sequence": "MRNLDFIDSFIPTEGKYIRVMDFYNSEYPFCIHAPSAPNGDIMTEICSRENNQYFIFFPTDDGRVIIANRHNGSVFTGEATSVVSDIYTGSPLQFFREVKRTMATYYLAIQNPESATDVRALEPHSHELPSRLYYTNNIENNSNILISNKEQIYLTLPSLPENEQYPKTPVLSGIDDIGPNQSEKSIIGSTLIPCIMVSDFISLGERMKTTPYYYVKHTQYWQSMWSALFPPGSKETKTEKSGITDTSQISMTDGINVSIGADFGLRFGNKTFGIKGGFTYDTKTQITNTSQLLIETTYTREYTNTENFPVRYTGYVLASEFTLHRSDGTQVNTIPWVALNDNYTTIARYPHFASEPLLGNTKIITDDQN", + "sequence_sha256": "ecfc9838683f2dce14aa974e075e896f8354c5d0d3247b965f75bccbdc01a710" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 370, + 1024 + ] + } +} \ No newline at end of file diff --git a/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P07650/3be5357697ef18007ae0960be61031d7a078005b73410e05fede6d849a7ccb7f/2a050e87dd546471/manifest.json b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P07650/3be5357697ef18007ae0960be61031d7a078005b73410e05fede6d849a7ccb7f/2a050e87dd546471/manifest.json new file mode 100644 index 0000000000000000000000000000000000000000..1656673ba0869538531b8cc0627d1e5018f01652 --- /dev/null +++ b/embeddings/esmfold_v1/75a3841ee059df2bf4d56688166c8fb459ddd97a/rcsb:P07650/3be5357697ef18007ae0960be61031d7a078005b73410e05fede6d849a7ccb7f/2a050e87dd546471/manifest.json @@ -0,0 +1,62 @@ +{ + "actual_modalities": [ + "single" + ], + "created_at": "2026-08-03T23:10:52.903970+00:00", + "files": { + "tensors.safetensors": "a7f856bd8e36981f2e0fec9149979bf8cfa3f617c674b8a918e265e6395bdee6" + }, + "metadata": { + "created_at": "2026-08-03 02:53:16 PM CDT", + "dataset_label": 0, + "dataset_row_id": "negative_examples:rcsb:P07650", + "dtype": "float32", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "label_class": "single_dominant_structured_state", + "model_id": "facebook/esmfold_v1", + "model_revision": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "model_sequence_sha256": "3be5357697ef18007ae0960be61031d7a078005b73410e05fede6d849a7ccb7f", + "protein_id": "rcsb:P07650", + "sequence_sha256": "3be5357697ef18007ae0960be61031d7a078005b73410e05fede6d849a7ccb7f", + "shape": [ + 440, + 1024 + ], + "split": "train" + }, + "request": { + "backend": "esmfold_v1", + "backend_version": "75a3841ee059df2bf4d56688166c8fb459ddd97a", + "extraction_config": { + "chunk_size": 128, + "max_sequence_length": 1022, + "nonstandard_residue_policy": "U_to_X", + "num_recycles": 0, + "output_dtype": "float32", + "representation": "folding_trunk_s_s" + }, + "model_name": "facebook/esmfold_v1", + "protein_id": "rcsb:P07650", + "requested_modalities": [ + "single" + ], + "sequence": "MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENNWQEAAKAVKAAIKLADKAPESTPTVYRRISE", + "sequence_sha256": "3be5357697ef18007ae0960be61031d7a078005b73410e05fede6d849a7ccb7f" + }, + "schema_version": "protein_state_router_embedding_bundle_v1", + "status": "complete", + "tensor_dtype": "torch.bool", + "tensor_shapes": { + "single": [ + 440, + 1024 + ] + } +} \ No newline at end of file