#!/bin/bash
#SBATCH --account=m5293
#SBATCH --qos=xfer
#SBATCH --time=12:00:00
#SBATCH --job-name=omol_copy_100k_share
#SBATCH --output=/global/cfs/projectdirs/m5293/ericqu/omol_elec_process/logs/copy_100k_share_%j.log
# Copy the finished, verified 100k share (repacked Pass A + Pass B1 C_occ) from scratch to CFS.
set -euo pipefail
SRC="$PSCRATCH/omol_100k"
DST="/global/cfs/projectdirs/m5293/ericqu/omol_elec_process/omol_elec_100k"
mkdir -p "$DST"
echo "copying $SRC -> $DST  $(date)"
rsync -a --no-inc-recursive "$SRC/" "$DST/"
echo "rsync finished $(date)"
echo "files: $(find "$DST" -type f | wc -l)   bytes: $(du -sb "$DST" | cut -f1)"