General QuickStart Guide for ASPIRE 2A: https://help.nscc.sg/wp-content/uploads/2024/05/ASPIRE2A-General-Quickstart-Guide.pdf General QuickStart Guide for ASPIRE 2A+: https://help.nscc.sg/wp-content/uploads/ASPIRE2A_Plus_General_Quick_Start_Guide.pdf GPU Server Access and Job Submission Guide This guide explains how to connect to the H100 GPU server through VS Code Remote SSH and how to submit GPU jobs using qsub. 1. SSH Access Path The connection path is: Local PC → Mac mini → GPU server → H100 GPU server Manual SSH steps: ssh -X ecteam@eyecodegpus.ddns.net ssh -X minh@gpuserver3 ssh smrvmdo@aspire2p.nus.edu.sg Do not store passwords inside this README or inside SSH config files. 2. VS Code Remote SSH Setup Open your SSH config file: code ~/.ssh/config Add the following configuration: Host mac-mini HostName eyecodegpus.ddns.net User ecteam ForwardX11 yes ServerAliveInterval 60 Host gpuserver3 HostName gpuserver3 User minh ProxyJump mac-mini ForwardX11 yes ServerAliveInterval 60 Host h100 HostName aspire2p.nus.edu.sg User smrvmdo ProxyJump gpuserver3 ServerAliveInterval 60 Then connect in VS Code: Remote-SSH: Connect to Host... Choose: h100 VS Code will connect through: mac-mini → gpuserver3 → h100 3. Test SSH Connection from Terminal Before using VS Code, test the connection from terminal: ssh -J ecteam@eyecodegpus.ddns.net,minh@gpuserver3 smrvmdo@aspire2p.nus.edu.sg If this works, VS Code Remote SSH should also work. 4. Request Interactive GPU Session To request an interactive session with 4 GPUs: qsub -I -q normal -P 11714283 -l select=1:ncpus=56:ngpus=4 -l walltime=12:00:00 For 2 GPUs: qsub -I -q normal -P 11714283 -l select=1:ncpus=28:ngpus=2 -l walltime=12:00:00 After the interactive job starts, you can run commands directly on the allocated compute node. Example: cd /path/to/project conda activate your_env python train.py 5. Submit a Batch Job Create a job script, for example: nano run_job.pbs Example run_job.pbs: #!/bin/bash #PBS -N my_gpu_job #PBS -q normal #PBS -P 11714283 #PBS -l select=1:ncpus=56:ngpus=4 #PBS -l walltime=12:00:00 #PBS -j oe cd $PBS_O_WORKDIR source ~/.bashrc conda activate your_env python train.py Submit the job: qsub run_job.pbs 6. Useful PBS Commands Check your running jobs: qstat -u $USER Check all jobs: qstat Delete/cancel a job: qdel Example: qdel 123456 Check job output after it finishes: ls cat my_gpu_job.o* 7. Example Training Job Example project structure: project/ ├── train.py ├── run_job.pbs └── README.md Example run_job.pbs: #!/bin/bash #PBS -N train_yolo #PBS -q normal #PBS -P 11714283 #PBS -l select=1:ncpus=56:ngpus=4 #PBS -l walltime=12:00:00 #PBS -j oe cd $PBS_O_WORKDIR source ~/.bashrc conda activate yolo_env python train.py --batch 64 --epochs 100 Submit: qsub run_job.pbs 8. Notes Use qsub -I only when you need an interactive terminal session. Use qsub run_job.pbs when you want to submit a training script and let it run in the queue. Do not run heavy GPU training directly on the login node. Do not put passwords in ~/.ssh/config. If VS Code SSH fails, first test the SSH command in terminal.