import pytest import openpnm as op import numpy as np def random_seed(target, domain, seed=None, lim=[0, 1]): inds = target[domain] np.random.seed(seed) seeds = np.random.rand(inds.sum())*(lim[1]-lim[0]) + lim[0] return seeds def factor(target, prop, f=1): vals = target[prop]*f return vals def dolittle(target, domain): N = target[domain].sum() d = {} d['item1'] = np.ones([N, ]) d['item2'] = np.ones([N, ])*2 d['item3'] = np.ones([N, ])*3 return d class Base2Test: def setup_class(self): g = op.network.Cubic(shape=[3, 3, 1]) g.add_model(propname='pore.seed@left', model=random_seed, lim=[0.2, 0.4], regen_mode='deferred') g.add_model(propname='pore.seed@right', model=random_seed, lim=[0.7, 0.99], regen_mode='deferred') g.add_model(propname='pore.seedx', model=factor, prop='pore.seed', f=10, regen_mode='deferred') g.add_model(propname='pore.test', model=factor, domain='front', prop='pore.seed', f=100, regen_mode='deferred') g.add_model(propname='pore.dict2', model=dolittle, regen_mode='deferred',) g.add_model(propname='pore.dict3', model=dolittle, domain='left', regen_mode='deferred',) g.add_model(propname='pore.dict3', model=dolittle, domain='right', regen_mode='deferred',) # Use official args g.run_model('pore.seed', domain='pore.left') assert np.sum(~np.isnan(g['pore.seed'])) == g['pore.left'].sum() # Use partial syntax g.run_model('pore.seed', domain='left') assert np.sum(~np.isnan(g['pore.seed'])) == g['pore.left'].sum() # Use lazy syntax g.run_model('pore.seed@right') assert np.sum(np.isnan(g['pore.seed'])) == 3 # Run the pore seed model for all domains at once: del g['pore.seed'] g.run_model('pore.seed') # This does not work yet assert 'pore.seed' in g.keys() assert g['pore.seed@left'].shape[0] == 3 assert g['pore.seed@right'].shape[0] == 3 assert 'pore.seedx' not in g.keys() # Full domain model g.run_model('pore.seedx') assert 'pore.seedx' in g.keys() x = g['pore.seedx'] assert x[~np.isnan(x)].min() > 2 # Run the non-domain enabled model on a subdomain assert 'pore.test' not in g g.run_model('pore.test') assert 'pore.test' in g assert np.isnan(g['pore.test']).sum() == 7 del g['pore.test'] g.run_model('pore.test@front') assert np.isnan(g['pore.test']).sum() == 7 # Fetch data with lazy syntax assert g['pore.seed@left'].shape[0] == 3 # Write data with lazy syntax, ensuring scalar to array conversion g['pore.seed@right'] = np.nan assert np.sum(~np.isnan(g['pore.seed'])) == g['pore.left'].sum() # Write array directly g['pore.seed@right'] = np.ones(3)*3 assert np.sum(np.isnan(g['pore.seed'])) == 3 # Use labels that were not used by models assert g['pore.seed@front'].shape[0] == 3 # Write a dict g['pore.dict'] = {'item1': 1, 'item2': 2.0} assert g['pore.dict.item1'].sum() == 9 assert g['pore.dict.item2'].sum() == 18 # A dict with domains g['pore.dict'] = {'item1@left': 2, 'item2@right': 3.0} assert g['pore.dict.item1'].sum() == 12 assert g['pore.dict.item2'].sum() == 21 g['pore.dict'] = {'item3@left': 1, 'item3@right': 2.0} # Double dots g['pore.nested.name1'] = 10 g['pore.nested.name2'] = 20 assert isinstance(g['pore.nested'], dict) assert len(g['pore.nested']) == 2 with pytest.raises(KeyError): g['pore.nested.fail'] del g['pore.nested.name1'] assert 'pore.nested.name1' not in g.keys() del g['pore.nested'] assert 'pore.nested.name2' not in g.keys() # More fun c = g.get_conduit_data('seed') assert c.shape == (12, 3) assert 'throat.seed' not in g assert np.isnan(c[:, 1]).sum() == g.Nt with pytest.raises(Exception): g.get_conduit_data('conns') with pytest.raises(Exception): g.get_conduit_data('xyz') # Run model that returns a dict to all pores g.run_model('pore.dict2') assert len(g['pore.dict2']) == 3 assert g['pore.dict2.item1'].sum() == 9 assert g['pore.dict2.item2'].sum() == 18 # Run model that returns a dict to only subdomain pores g.run_model('pore.dict3@left') assert len(g['pore.dict3']) == 3 assert np.isnan(g['pore.dict3.item1']).sum() == 6 assert g['pore.dict3.item1@left'].sum() == 3 assert np.isnan(g['pore.dict3.item2']).sum() == 6 assert np.isnan(g['pore.dict3.item3']).sum() == 6 # Run model on both domains that its assigned g.run_model('pore.dict3') assert g['pore.dict3.item1@left'].sum() == 3 assert g['pore.dict3.item1@right'].sum() == 3 if __name__ == '__main__': t = Base2Test() t.setup_class() self = t for item in t.__dir__(): if item.startswith('test'): print(f'Running test: {item}') t.__getattribute__(item)()