import numpy as np import openpnm as op class UtilsTest: def setup_class(self): self.net = op.network.Cubic(shape=[3, 3, 3]) def teardown_class(self): ws = op.Workspace() ws.clear() def test_nested_dict(self): d = op.utils.NestedDict() d['top']['middle']['bottom'] = 1 assert d == {'top': {'middle': {'bottom': 1}}} s = d.__str__() assert s == '-top\n--middle\n---bottom\n' a = d.to_dict() assert isinstance(a, dict) def test_printable_list(self): L = op.utils.PrintableList(['item1', 'item2', 'item2']) s = L.__str__().split('\n') assert len(s) == 5 def test_printable_dict(self): D = op.utils.PrintableDict(**{'item1': 1, 'item2': 2, 'item3': np.array([1, 2])}) s = D.__str__().split('\n') assert len(s) == 7 # r = D.__repr__() # assert r == "{'item1': 1, 'item2': 2, 'item3': array([1, 2])}" def test_is_symmetric_w_rtol(self): A = np.array([[1, 2, 3], [2, 4, 6], [3.000001, 6, 99]]) is_sym = op.utils.is_symmetric(A, rtol=1e-4) assert is_sym is_sym = op.utils.is_symmetric(A, rtol=1e-6) assert not is_sym def test_is_symmetric_FickianDiffusion_must_be_symmetric(self): net = op.network.Cubic(shape=[5, 5, 5]) net.add_model_collection( op.models.collections.geometry.cones_and_cylinders) net.regenerate_models() air = op.phase.Air(network=net) air.add_model_collection(op.models.collections.phase.air) air.add_model_collection(op.models.collections.physics.standard) air.regenerate_models() fd = op.algorithms.FickianDiffusion(network=net, phase=air) fd.set_value_BC(pores=net.pores("left"), values=1.0) fd.set_value_BC(pores=net.pores("right"), values=0.1) assert op.utils.is_symmetric(fd.A) def test_is_symmetric_AdvectionDiffusion_must_be_nonsymmetric(self): net = op.network.Cubic(shape=[5, 5, 5]) net.add_model_collection( op.models.collections.geometry.cones_and_cylinders) net.regenerate_models() air = op.phase.Air(network=net) air.add_model_collection( op.models.collections.phase.air) air.add_model_collection(op.models.collections.physics.standard) air.regenerate_models() ad = op.algorithms.AdvectionDiffusion(network=net, phase=air) ad.set_value_BC(pores=net.pores("left"), values=1.0) ad.set_value_BC(pores=net.pores("right"), values=0.1) # Uniform pressure field --> no advection --> still symmetric assert op.utils.is_symmetric(ad.A) sf = op.algorithms.StokesFlow(network=net, phase=air) sf.set_value_BC(pores=net.pores("left"), values=1.0) sf.set_value_BC(pores=net.pores("right"), values=0.0) sf.run() air.update(sf.soln) ad.settings._update({"cache": False}) ad._build_A() # Non-uniform pressure field --> positive advection --> non-symmetric assert not op.utils.is_symmetric(ad.A) def test_is_valid_propname(self): assert op.utils.is_valid_propname("pore.foo") assert op.utils.is_valid_propname("pore.zed.foo") assert op.utils.is_valid_propname("throat.bar") assert op.utils.is_valid_propname("throat.bar.foo") assert not op.utils.is_valid_propname("pores.blah") assert not op.utils.is_valid_propname("foo.blah") assert not op.utils.is_valid_propname("pore") assert not op.utils.is_valid_propname("throat") assert not op.utils.is_valid_propname("pore.") assert not op.utils.is_valid_propname("throat.") assert not op.utils.is_valid_propname("pore.foo..bar") if __name__ == '__main__': t = UtilsTest() self = t t.setup_class() for item in t.__dir__(): if item.startswith('test'): print(f"Running test: {item}") t.__getattribute__(item)()