""" Test general implementation in haddock3 modules. Ensures all modules follow the same compatible architecture. """ import importlib.util import pytest from pathlib import Path from haddock.gear.config import load as read_config from haddock.gear.prepare_run import ( ALL_POSSIBLE_GENERAL_PARAMETERS, identify_modules, validate_module_names_are_not_misspelled, validate_parameters_are_not_misspelled, validate_modules_params, ) from haddock.gear.parameters import config_optional_general_parameters_dict from haddock.libs.libutil import recursive_dict_update, remove_dict_keys from haddock.modules import non_mandatory_general_parameters_defaults examples_path = Path( Path(__file__).resolve().parents[1], "examples", ) examples_cfg_files = list(examples_path.rglob("*.cfg")) examples_cfg_files_test = list(examples_path.rglob("*-test.cfg")) def test_there_are_config_examples(): """Test there are configuration files for examples.""" assert examples_cfg_files def test_there_are_test_config_examples(): """Test there are configuration files for examples.""" assert examples_cfg_files_test @pytest.fixture(params=examples_cfg_files, name="example_config") def fixture_example_config(request): """Give Examples's configuration files.""" return request.param def test_config_reader_can_read_example_configs(example_config): """Test gear.config_reader can read examples' configuration file.""" strict = Path(example_config).name != "params.cfg" read_config(example_config, strict=strict) def test_integration_examples(): """Test if integration helper scripts have the same examples.""" run_tests = Path(examples_path, "run_tests.py") spec1 = importlib.util.spec_from_file_location("runtests", run_tests) mod1 = importlib.util.module_from_spec(spec1) spec1.loader.exec_module(mod1) compare_runs = Path(examples_path, "compare_runs.py") spec2 = importlib.util.spec_from_file_location("compare", compare_runs) mod2 = importlib.util.module_from_spec(spec2) spec2.loader.exec_module(mod2) assert mod1.examples == mod2.examples, f"{mod1.examples}!={mod2.examples}" def test_validate_cfg_files(): """Test all the examples configuration files are valid.""" for cfg_file in examples_cfg_files: assert validate_cfg_file(cfg_file), f"Error detected in {cfg_file}!" def validate_cfg_file(cfg_file: Path) -> bool: """Handeler to validate a configuration file. Parameters ---------- cfg_file : Path Path to the configuration file to check. Returns ------- bool True if config file is OK else False """ try: if cfg_file.name == "params.cfg": # skip the params.cfg files as they might be part of old runs return True config_files = read_config(cfg_file) # update default non-mandatory parameters with user params params = recursive_dict_update( config_optional_general_parameters_dict, config_files["final_cfg"], ) params = recursive_dict_update( non_mandatory_general_parameters_defaults, params, ) validate_module_names_are_not_misspelled(params) # separate general from modules' parameters _modules_keys = identify_modules(params) general_params = remove_dict_keys(params, _modules_keys) modules_params = remove_dict_keys(params, list(general_params.keys())) validate_parameters_are_not_misspelled( general_params, reference_parameters=ALL_POSSIBLE_GENERAL_PARAMETERS, ) validate_modules_params(modules_params, 20) except Exception as e: print(e) return False else: return True