eval_track,paper_id,doi,title,version,date_received,category,published_journal,published_doi,published_date,sjr_rank,sjr,cit_per_doc_2yr,xml_path,candidate_journal_set
biochemistry,10.1101_2024.10.01.616059_v1,10.1101/2024.10.01.616059,Evolutionary origins and innovations sculpting the mammalian PRPS enzyme complex,v1,2024-10-01,Biochemistry,Nature Communications,10.1038/s41467-025-61216-z,2025-07-08,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.01.616059_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.05.616782_v1,10.1101/2024.10.05.616782,Structure and function of the yeast amino acid-sensing SEAC-EGOC supercomplex,v1,2024-10-05,Biochemistry,Nature Structural & Molecular Biology,10.1038/s41594-026-01746-2,2026-03,48,6.187,6.42,extracted_data/October_2024/10.1101_2024.10.05.616782_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.07.616933_v1,10.1101/2024.10.07.616933,Mining the CRBN Target Space Redefines Rules for Molecular Glue-induced Neosubstrate Recognition,v1,2024-10-07,Biochemistry,Science,10.1126/science.adt6736,2025-07-03,19,10.416,15.26,extracted_data/October_2024/10.1101_2024.10.07.616933_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.08.617196_v1,10.1101/2024.10.08.617196,Enhancement of Enzymatic Activity by Biomolecular Condensates through pH Buffering,v1,2024-10-08,Biochemistry,Nature Communications,10.1038/s41467-025-61013-8,2025-07-10,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.08.617196_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.09.617371_v1,10.1101/2024.10.09.617371,Structural basis of TMPRSS11D specificity and autocleavage activation,v1,2024-10-09,Biochemistry,Nature Communications,10.1038/s41467-025-59677-3,2025-05-10,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.09.617371_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.14.618244_v1,10.1101/2024.10.14.618244,A human high-fidelity DNA polymerase holoenzyme has a wide range of lesion bypass activities,v1,2024-10-14,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf646,2025-07-08,34,7.776,16.90,extracted_data/October_2024/10.1101_2024.10.14.618244_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.14.618260_v1,10.1101/2024.10.14.618260,Sequential structure probing of cotranscriptional RNA folding intermediates,v1,2024-10-14,Biochemistry,Nature Communications,10.1038/s41467-025-60425-w,2025-06-01,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.14.618260_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.15.614675_v1,10.1101/2024.10.15.614675,‘Identification of RING E3 pseudoligases in the TRIM protein family’,v1,2024-10-15,Biochemistry,Nature Communications,10.1038/s41467-025-58807-1,2025-04-11,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.15.614675_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.17.618737_v2,10.1101/2024.10.17.618737,Molecular mechanism of thyroxine transport by monocarboxylate transporters,v2,2024-10-17,Biochemistry,Nature Communications,10.1038/s41467-025-59751-w,2025-05-14,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.17.618737_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.18.619134_v1,10.1101/2024.10.18.619134,"High-resolution mapping of Sigma Factor DNA Binding Sequences using Artificial Promoters, RNA Aptamers and Deep Sequencing",v1,2024-10-18,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf306,2025-04-10,34,7.776,16.90,extracted_data/October_2024/10.1101_2024.10.18.619134_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.18.619173_v1,10.1101/2024.10.18.619173,Drp1-mediated mitochondrial fission protects macrophages from mtDNA/ZBP1-mediated sterile inflammation and inhibits post-infarct cardiac remodeling,v1,2024-10-18,Biochemistry,Cardiovascular Research,10.1093/cvr/cvag006,2026-03-16,100,3.947,9.65,extracted_data/October_2024/10.1101_2024.10.18.619173_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.22.619592_v3,10.1101/2024.10.22.619592,Structural basis for a dual-function type II-B CRISPR-Cas9,v3,2024-10-22,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf585,2025-06-20,34,7.776,16.90,extracted_data/February_2025/10.1101_2024.10.22.619592_v3.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.23.619806_v2,10.1101/2024.10.23.619806,Iron-sensing and redox properties of the hemerythrin-like domains of Arabidopsis BRUTUS and BRUTUS-LIKE2 proteins,v2,2024-10-23,Biochemistry,Nature Communications,10.1038/s41467-025-58853-9,2025-04-24,71,4.761,14.63,extracted_data/March_2025/10.1101_2024.10.23.619806_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.23.619915_v1,10.1101/2024.10.23.619915,Evolutionary-Scale Enzymology Enables Biochemical Constant Prediction Across a Multi-Peaked Catalytic Landscape,v1,2024-10-23,Biochemistry,Science,10.1126/science.adu1058,2025-06-12,19,10.416,15.26,extracted_data/October_2024/10.1101_2024.10.23.619915_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.23.619951_v1,10.1101/2024.10.23.619951,PACT prevents aberrant activation of PKR by endogenous dsRNA without sequestration,v1,2024-10-23,Biochemistry,Nature Communications,10.1038/s41467-025-58433-x,2025-04-08,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.23.619951_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.24.620088_v1,10.1101/2024.10.24.620088,Topological rearrangements activate the HerA-DUF anti-phage defense system,v1,2024-10-24,Biochemistry,Molecular Cell,10.1016/j.molcel.2025.02.001,2025-03,26,9.051,12.04,extracted_data/October_2024/10.1101_2024.10.24.620088_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.25.620255_v1,10.1101/2024.10.25.620255,A sequence-specific RNA acetylation catalyst,v1,2024-10-25,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf217,2025-03-20,34,7.776,16.90,extracted_data/October_2024/10.1101_2024.10.25.620255_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.25.620263_v1,10.1101/2024.10.25.620263,Human-mouse proteomics reveals the shared pathways in Alzheimer’s disease and delayed protein turnover in the amyloidome,v1,2024-10-25,Biochemistry,Nature Communications,10.1038/s41467-025-56853-3,2025-02-11,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.25.620263_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.26.620442_v1,10.1101/2024.10.26.620442,Autocatalytic assembly of a chimeric aminoacyl-RNA synthetase ribozyme,v1,2024-10-26,Biochemistry,Science Advances,10.1126/sciadv.adu3693,2025-04-04,79,4.324,12.06,extracted_data/October_2024/10.1101_2024.10.26.620442_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.10.29.620861_v1,10.1101/2024.10.29.620861,Directed evolution of the multicopper oxidase laccase for cell surface proximity labeling and electron microscopy,v1,2024-10-29,Biochemistry,Nature Chemical Biology,10.1038/s41589-025-01973-6,2025-12,56,5.521,7.32,extracted_data/October_2024/10.1101_2024.10.29.620861_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.04.621790_v1,10.1101/2024.11.04.621790,Constitutive activity of an atypical chemokine receptor revealed by inverse agonistic nanobodies,v1,2024-11-04,Biochemistry,Nature Communications,10.1038/s41467-025-65858-x,2025-12-02,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.04.621790_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.05.622009_v1,10.1101/2024.11.05.622009,Discovery of A Chimeric Polyketide Family as Cancer Immunogenic Chemotherapeutic Leads,v1,2024-11-05,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.4c09582,2025-01-08,55,5.554,15.01,extracted_data/November_2024/10.1101_2024.11.05.622009_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.06.618433_v1,10.1101/2024.11.06.618433,Light-dependent flavin redox and adduct states control the conformation and DNA binding activity of the transcription factor EL222,v1,2024-11-06,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf215,2025-03-20,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.06.618433_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.08.618644_v5,10.1101/2024.11.08.618644,Shifting Beyond Classical Drug Synergy in Combinatorial Therapy through Solubility Alterations,v5,2024-11-08,Biochemistry,Nature Communications,10.1038/s41467-026-70394-3,2026-03-25,71,4.761,14.63,extracted_data/August_2025/10.1101_2024.11.08.618644_v5.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.09.622779_v2,10.1101/2024.11.09.622779,DnaB and DciA: Mechanisms of Helicase Loading and Translocation on ssDNA,v2,2024-11-09,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf521,2025-06-20,34,7.776,16.90,extracted_data/May_2025/10.1101_2024.11.09.622779_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.11.622991_v1,10.1101/2024.11.11.622991,Microtubule association induces a Mg-free apo-like ADP pre-release conformation in kinesin-1 that is unaffected by its autoinhibitory tail,v1,2024-11-11,Biochemistry,Nature Communications,10.1038/s41467-025-61498-3,2025-07-05,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.11.622991_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.11.623112_v2,10.1101/2024.11.11.623112,Structures of vertebrate R2 retrotransposon complexes during target-primed reverse transcription and after second strand nicking,v2,2024-11-11,Biochemistry,Science Advances,10.1126/sciadv.adu5533,2025-06-20,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.11.623112_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.13.623453_v2,10.1101/2024.11.13.623453,Mechanism-based approach in designing patient-specific combination therapies for nonsense mutation diseases,v2,2024-11-13,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf216,2025-03-20,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.11.13.623453_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.13.623519_v1,10.1101/2024.11.13.623519,Structural basis of augment taurine uptake by taurine transporter alleviating cellular senescence,v1,2024-11-13,Biochemistry,Cell Research,10.1038/s41422-025-01090-y,2025-03-20,27,8.740,9.06,extracted_data/November_2024/10.1101_2024.11.13.623519_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.17.623997_v1,10.1101/2024.11.17.623997,AcrVIB1 inhibits CRISPR-Cas13b immunity by promoting unproductive crRNA binding accessible to RNase attack,v1,2024-11-17,Biochemistry,Molecular Cell,10.1016/j.molcel.2025.01.020,2025-03,26,9.051,12.04,extracted_data/November_2024/10.1101_2024.11.17.623997_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.20.623956_v1,10.1101/2024.11.20.623956,Histone H3 N-terminal recognition by the PHD finger of PHRF1 is required for proper DNA damage response,v1,2024-11-20,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf666,2025-07-08,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.20.623956_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.21.623953_v2,10.1101/2024.11.21.623953,Mechanistic basis for protein conjugation in a diverged bacterial ubiquitination pathway,v2,2024-11-21,Biochemistry,Nature Structural & Molecular Biology,10.1038/s41594-025-01696-1,2026-01,48,6.187,6.42,extracted_data/November_2024/10.1101_2024.11.21.623953_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.21.624570_v1,10.1101/2024.11.21.624570,Switchable client specificity in a dual functional chaperone coordinates light harvesting complex biogenesis,v1,2024-11-21,Biochemistry,Science Advances,10.1126/sciadv.adu5791,2025-06-13,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.21.624570_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.21.624772_v1,10.1101/2024.11.21.624772,Structural insights into cholesterol sensing by the LYCHOS-mTORC1 pathway,v1,2024-11-21,Biochemistry,Nature Communications,10.1038/s41467-025-61966-w,2025-07-23,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.21.624772_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.22.624703_v1,10.1101/2024.11.22.624703,Conformational plasticity across phylogenetic clusters of RND multidrug efflux pumps and its impact on substrate specificity,v1,2024-11-22,Biochemistry,Nature Communications,10.1038/s41467-025-66751-3,2025-11-26,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.22.624703_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.22.624879_v1,10.1101/2024.11.22.624879,14-3-3 binding maintains the Parkinson’s associated kinase LRRK2 in an inactive state,v1,2024-11-22,Biochemistry,Nature Communications,10.1038/s41467-025-62337-1,2025-08-05,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.22.624879_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.25.625123_v1,10.1101/2024.11.25.625123,Structure and mechanism of the RalGAP tumor suppressor complex,v1,2024-11-25,Biochemistry,Nature Communications,10.1038/s41467-025-61743-9,2025-07-30,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.25.625123_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.25.625307_v1,10.1101/2024.11.25.625307,Visualization of a multi-turnover Cas9 after product release,v1,2024-11-25,Biochemistry,Nature Communications,10.1038/s41467-025-60668-7,2025-07-01,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.25.625307_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.26.625192_v1,10.1101/2024.11.26.625192,Allosteric activation of the SPRTN protease by ubiquitin maintains genome stability,v1,2024-11-26,Biochemistry,Nature Communications,10.1038/s41467-025-61224-z,2025-07-21,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.26.625192_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.26.625361_v1,10.1101/2024.11.26.625361,The dual ubiquitin binding mode of SPRTN secures rapid spatiotemporal proteolysis of DNA-protein crosslinks,v1,2024-11-26,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf638,2025-07-08,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.26.625361_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.26.625528_v2,10.1101/2024.11.26.625528,Stereoselectivity of Aminoacyl-RNA Loop-closing Ligation,v2,2024-11-26,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.4c16905,2025-06-11,55,5.554,15.01,extracted_data/November_2024/10.1101_2024.11.26.625528_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.27.625627_v1,10.1101/2024.11.27.625627,Gut microbiota-derived GlcNAc-MurNAc is a TLR4 agonist that protects the host gut,v1,2024-11-27,Biochemistry,Nature Communications,10.1038/s41467-025-60678-5,2025-07-01,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.27.625627_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.11.29.625835_v1,10.1101/2024.11.29.625835,Cryo-EM structures of the MnmE-MnmG complex reveal large conformational changes and provide new insights into the mechanism of tRNA modification,v1,2024-11-29,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf824,2025-08-27,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.11.29.625835_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.01.626249_v1,10.1101/2024.12.01.626249,G-quadruplex topologies determine the functional outcome of guanine-rich bioactive oligonucleotides,v1,2024-12-01,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf590,2025-06-20,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.01.626249_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.03.626601_v1,10.1101/2024.12.03.626601,Harnessing the FBXW7 somatic mutant R465C for targeted protein degradation,v1,2024-12-03,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.4c17331,2025-02-19,55,5.554,15.01,extracted_data/December_2024/10.1101_2024.12.03.626601_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.07.627348_v1,10.1101/2024.12.07.627348,Loss-of-function coding variants in the Ras of Complex Proteins/GTPase domain of Leucine Rich Repeat Kinase 2,v1,2024-12-07,Biochemistry,Protein Science,10.1002/pro.70190,2025-07,73,4.657,6.35,extracted_data/December_2024/10.1101_2024.12.07.627348_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.08.627421_v2,10.1101/2024.12.08.627421,Atom-economic enantioselective photoenzymatic radical hydroalkylation via single-electron oxidation of carbanions,v2,2024-12-08,Biochemistry,Nature Catalysis,10.1038/s41929-025-01434-2,2025-10-31,12,14.132,25.30,extracted_data/October_2025/10.1101_2024.12.08.627421_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.11.627969_v1,10.1101/2024.12.11.627969,Calmodulin binding is required for calcium mediated TRPA1 desensitization,v1,2024-12-11,Biochemistry,Nature Communications,10.1038/s41467-025-63767-7,2025-09-30,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.11.627969_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.12.626759_v1,10.1101/2024.12.12.626759,"H2B.W2, a Spermatocytes-specific Histone Variant, disrupts nucleosome stability and reduces chromatin compaction",v1,2024-12-12,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf825,2025-08-27,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.12.626759_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.13.628212_v1,10.1101/2024.12.13.628212,Leucine Aminopeptidase LyLAP enables lysosomal degradation of membrane proteins,v1,2024-12-13,Biochemistry,Science,10.1126/science.adq8331,2025-03-28,19,10.416,15.26,extracted_data/December_2024/10.1101_2024.12.13.628212_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.13.628308_v1,10.1101/2024.12.13.628308,Enzymatic epimerization of monoterpene indole alkaloids in Kratom,v1,2024-12-13,Biochemistry,Nature Chemical Biology,10.1038/s41589-025-01970-9,2026-02,56,5.521,7.32,extracted_data/December_2024/10.1101_2024.12.13.628308_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.14.628514_v5,10.1101/2024.12.14.628514,Structurally distinct manganese-sensing riboswitch aptamers regulate different expression platform architectures,v5,2024-12-14,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf477,2025-06-06,34,7.776,16.90,extracted_data/May_2025/10.1101_2024.12.14.628514_v5.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.17.628619_v1,10.1101/2024.12.17.628619,Mechanism of D-type cyclins recognition by the AMBRA1 E3 ligase receptor,v1,2024-12-17,Biochemistry,Science Advances,10.1126/sciadv.adu8708,2025-05-23,79,4.324,12.06,extracted_data/December_2024/10.1101_2024.12.17.628619_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.17.628942_v1,10.1101/2024.12.17.628942,Spatially barcoding biochemical reactions using DNA nanostructures unveil a major contact mechanism in proximity labeling,v1,2024-12-17,Biochemistry,Nature Chemical Biology,10.1038/s41589-025-02086-w,2025-12-24,56,5.521,7.32,extracted_data/December_2024/10.1101_2024.12.17.628942_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.18.629151_v1,10.1101/2024.12.18.629151,Scavenger receptor CD163 multimerises to allow uptake of diverse ligands,v1,2024-12-18,Biochemistry,Nature Communications,10.1038/s41467-025-62054-9,2025-07-18,71,4.761,14.63,extracted_data/January_2025/10.1101_2024.12.18.629151_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.18.629163_v1,10.1101/2024.12.18.629163,"Architecture of the UBR4 complex, a giant E4 ligase central to eukaryotic protein quality control",v1,2024-12-18,Biochemistry,Science,10.1126/science.adv9309,2025-08-28,19,10.416,15.26,extracted_data/December_2024/10.1101_2024.12.18.629163_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.19.629450_v2,10.1101/2024.12.19.629450,Hydralazine inhibits cysteamine dioxygenase to treat preeclampsia and senesce glioblastoma,v2,2024-12-19,Biochemistry,Science Advances,10.1126/sciadv.adx7687,2025-10-17,79,4.324,12.06,extracted_data/January_2025/10.1101_2024.12.19.629450_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.28.630583_v1,10.1101/2024.12.28.630583,Chromosome end protection by RAP1-mediated inhibition of DNA-PK,v1,2024-12-28,Biochemistry,Nature,10.1038/s41586-025-08896-1,2025-06-26,7,18.288,18.47,extracted_data/December_2024/10.1101_2024.12.28.630583_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.30.628871_v1,10.1101/2024.12.30.628871,YnaI exemplifies the diversity of structural gating mechanisms in mechanosensitive channels of small conductance,v1,2024-12-30,Biochemistry,Nature Communications,10.1038/s41467-025-63253-0,2025-08-23,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.30.628871_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.30.630499_v1,10.1101/2024.12.30.630499,Structural basis of phosphate export by human XPR1,v1,2024-12-30,Biochemistry,Cell Research,10.1038/s41422-025-01081-z,2025-02-28,27,8.740,9.06,extracted_data/December_2024/10.1101_2024.12.30.630499_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.30.630615_v2,10.1101/2024.12.30.630615,A nucleotide code governs Lis1’s ability to relieve dynein autoinhibition,v2,2024-12-30,Biochemistry,Nature Chemical Biology,10.1038/s41589-025-02096-8,2026-04,56,5.521,7.32,extracted_data/January_2025/10.1101_2024.12.30.630615_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.30.630784_v1,10.1101/2024.12.30.630784,Structural basis for ring-opening fluorescence by the RhoBAST RNA aptamer,v1,2024-12-30,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf555,2025-06-20,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.30.630784_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.31.630877_v1,10.1101/2024.12.31.630877,A third type of PETase from the marine Halopseudomonas lineage,v1,2024-12-31,Biochemistry,Protein Science,10.1002/pro.70305,2025-10,73,4.657,6.35,extracted_data/January_2025/10.1101_2024.12.31.630877_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2024.12.31.630957_v1,10.1101/2024.12.31.630957,Identification and characterization of shifted G•U wobble pairs resulting from alternative protonation of RNA,v1,2024-12-31,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf575,2025-07-19,34,7.776,16.90,extracted_data/January_2025/10.1101_2024.12.31.630957_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.02.631033_v1,10.1101/2025.01.02.631033,"Ether Rhodamines with Enhanced Hydrophilicity, Fluorogenicity, and Brightness for Super-Resolution Imaging",v1,2025-01-02,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c08833,2025-06-25,55,5.554,15.01,extracted_data/January_2025/10.1101_2025.01.02.631033_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.02.631069_v1,10.1101/2025.01.02.631069,Biochemical Profiling and Structural Basis of ADAR1-Mediated RNA Editing,v1,2025-01-02,Biochemistry,Molecular Cell,10.1016/j.molcel.2025.02.017,2025-04,26,9.051,12.04,extracted_data/January_2025/10.1101_2025.01.02.631069_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.03.631205_v1,10.1101/2025.01.03.631205,Crystal structure of MutYX: A novel clusterless adenine DNA glycosylase with a distinct C-terminal domain and 8-Oxoguanine recognition sphere,v1,2025-01-03,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf1127,2025-11-13,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.03.631205_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.04.631262_v1,10.1101/2025.01.04.631262,RNA denaturation underlies circular RNA separation,v1,2025-01-04,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf1160,2025-11-13,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.04.631262_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.04.631292_v4,10.1101/2025.01.04.631292,Allosteric Residue Dynamics in Insulin: Temperature Induces Shift from Dihexamer to Hexamer Collective Motion,v4,2025-01-04,Biochemistry,Protein Science,10.1002/pro.70245,2025-09,73,4.657,6.35,extracted_data/February_2025/10.1101_2025.01.04.631292_v4.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.05.631374_v1,10.1101/2025.01.05.631374,Cycling Molecular Assemblies for Selective Cancer Cell Golgi Disruption,v1,2025-01-05,Biochemistry,Nature Communications,10.1038/s41467-026-68768-8,2026-01-28,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.05.631374_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.06.630955_v2,10.1101/2025.01.06.630955,Butyrolactol A potentiates caspofungin efficacy against resistant fungi via phospholipid flippase inhibition,v2,2025-01-06,Biochemistry,Cell,10.1016/j.cell.2025.11.036,2026-01,3,22.612,30.22,extracted_data/July_2025/10.1101_2025.01.06.630955_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.07.631695_v4,10.1101/2025.01.07.631695,Ancient gene clusters govern the initiation of monoterpenoid indole alkaloid biosynthesis and C3 stereochemistry inversion,v4,2025-01-07,Biochemistry,Nature Communications,10.1038/s41467-025-65543-z,2025-11-25,71,4.761,14.63,extracted_data/September_2025/10.1101_2025.01.07.631695_v4.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.07.631748_v1,10.1101/2025.01.07.631748,Strategic Modulation of Polarity and Viscosity Sensitivity of Bimane Molecular Rotor-Based Fluorophores for Imaging α-Synuclein,v1,2025-01-07,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.4c17933,2025-05-07,55,5.554,15.01,extracted_data/January_2025/10.1101_2025.01.07.631748_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.09.632186_v1,10.1101/2025.01.09.632186,Molecular and structural basis of a subfamily of PrfH rescuing both the damaged and intact ribosomes stalled in translation,v1,2025-01-09,Biochemistry,Science Advances,10.1126/sciadv.aea7378,2026-01-23,79,4.324,12.06,extracted_data/January_2025/10.1101_2025.01.09.632186_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.09.632187_v1,10.1101/2025.01.09.632187,Leading and lagging strand abasic sites differentially affect vertebrate replisome progression but involve analogous bypass mechanisms,v1,2025-01-09,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf975,2025-09-23,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.09.632187_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.10.632481_v1,10.1101/2025.01.10.632481,The bile acid-sensitive ion channel is gated by Ca2+-dependent conformational changes in the transmembrane domain,v1,2025-01-10,Biochemistry,Nature Communications,10.1038/s41467-025-62038-9,2025-07-22,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.10.632481_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.11.632532_v1,10.1101/2025.01.11.632532,A novel broad-spectrum antibiotic targets multiple-drug-resistant bacteria with dual binding targets and no detectable resistance,v1,2025-01-11,Biochemistry,Nature Communications,10.1038/s41467-025-62407-4,2025-07-31,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.11.632532_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.13.632710_v2,10.1101/2025.01.13.632710,α-Synuclein aggregates inhibit ESCRT-III through sequestration and collateral degradation,v2,2025-01-13,Biochemistry,Molecular Cell,10.1016/j.molcel.2025.08.022,2025-09,26,9.051,12.04,extracted_data/January_2025/10.1101_2025.01.13.632710_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.13.632842_v1,10.1101/2025.01.13.632842,"A suite of pre-assembled, pET28b-based Golden Gate vectors for efficient protein engineering and expression",v1,2025-01-13,Biochemistry,Protein Science,10.1002/pro.70106,2025-04,73,4.657,6.35,extracted_data/January_2025/10.1101_2025.01.13.632842_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.14.632894_v1,10.1101/2025.01.14.632894,The oncogenic CCDC6-RET fusion product is a dual ATP and ADP-dependent kinase that functions via cis-phosphorylation,v1,2025-01-14,Biochemistry,Nature Communications,10.1038/s41467-026-69833-y,2026-03-06,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.14.632894_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.14.633079_v2,10.1101/2025.01.14.633079,Monitoring monomer-specific acyl-tRNA levels in cells with PARTI,v2,2025-01-14,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf327,2025-04-22,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.14.633079_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.16.633180_v1,10.1101/2025.01.16.633180,Mechanism of RPA phosphocode priming and tuning by Cdk1/Wee1 signaling circuit,v1,2025-01-16,Biochemistry,Nature Communications,10.1038/s41467-025-66794-6,2025-12-09,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.16.633180_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.17.633572_v1,10.1101/2025.01.17.633572,The mycotoxin Beauvericin is an uncompetitive inhibitor of Cathepsin B,v1,2025-01-17,Biochemistry,Protein Science,10.1002/pro.70173,2025-06,73,4.657,6.35,extracted_data/January_2025/10.1101_2025.01.17.633572_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.17.633603_v1,10.1101/2025.01.17.633603,Conformational Dynamics and Membrane Insertion Mechanism of B4GALNT1 in Ganglioside Synthesis,v1,2025-01-17,Biochemistry,Nature Communications,10.1038/s41467-025-60593-9,2025-07-01,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.17.633603_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.21.633632_v4,10.1101/2025.01.21.633632,Atom-level Machine Learning of Protein-Glycan Interactions and Cross-chiral Recognition in Glycobiology,v4,2025-01-21,Biochemistry,Science Advances,10.1126/sciadv.adx6373,2025-12-05,79,4.324,12.06,extracted_data/March_2025/10.1101_2025.01.21.633632_v4.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.21.634006_v1,10.1101/2025.01.21.634006,Peptide Design through Binding Interface Mimicry,v1,2025-01-21,Biochemistry,Nature Biomedical Engineering,10.1038/s41551-025-01507-4,2025-10-01,21,10.105,21.44,extracted_data/January_2025/10.1101_2025.01.21.634006_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.22.634254_v1,10.1101/2025.01.22.634254,A Cysteine-Less and Ultra-Fast Split Intein Rationally Engineered from Being Aggregation-Prone to Highly Efficient in Protein trans-Splicing,v1,2025-01-22,Biochemistry,Nature Communications,10.1038/s41467-025-57596-x,2025-03-19,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.22.634254_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.23.634628_v2,10.1101/2025.01.23.634628,Elucidation of the biosynthetic pathway of reserpine,v2,2025-01-23,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c02863,2025-07-23,55,5.554,15.01,extracted_data/January_2025/10.1101_2025.01.23.634628_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.24.634655_v3,10.1101/2025.01.24.634655,ST-FFPE-mIF: Integrating Spatial Transcriptomics and Multiplex Immunofluorescence in Formalin-Fixed Paraffin-Embedded Tissues Using Stereo-seq,v3,2025-01-24,Biochemistry,Genome Biology,10.1186/s13059-025-03900-3,2025-12-16,53,5.710,9.04,extracted_data/April_2025/10.1101_2025.01.24.634655_v3.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.28.635216_v1,10.1101/2025.01.28.635216,Collective biosynthesis of plant spirooxindole alkaloids through enzyme discovery and engineering,v1,2025-01-28,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c02990,2025-06-25,55,5.554,15.01,extracted_data/January_2025/10.1101_2025.01.28.635216_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.28.635220_v1,10.1101/2025.01.28.635220,Structural Basis for OAS2 Regulation and its Antiviral Function,v1,2025-01-28,Biochemistry,Molecular Cell,10.1016/j.molcel.2025.05.001,2025-06,26,9.051,12.04,extracted_data/January_2025/10.1101_2025.01.28.635220_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.28.635287_v1,10.1101/2025.01.28.635287,Chemical Synthesis of Oligosaccharides Derived from Streptococcus pneumoniae Serotype 35B and D to Investigate Binding of Complement and Serum Factors,v1,2025-01-28,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c12005,2025-08-20,55,5.554,15.01,extracted_data/January_2025/10.1101_2025.01.28.635287_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.29.634835_v1,10.1101/2025.01.29.634835,Structural basis of undecaprenyl phosphate glycosylation leading to polymyxin resistance in Gram-negative bacteria,v1,2025-01-29,Biochemistry,Nature Communications,10.1038/s41467-025-65968-6,2025-12-09,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.01.29.634835_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.01.31.635883_v1,10.1101/2025.01.31.635883,Proteomic Ligandability Maps of Phosphorus(V) Stereoprobes Identify Covalent TLCD1 Inhibitors,v1,2025-01-31,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c01944,2025-05-07,55,5.554,15.01,extracted_data/February_2025/10.1101_2025.01.31.635883_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.04.636406_v1,10.1101/2025.02.04.636406,Using a stable protein scaffold to display peptides that bind to alpha-synuclein fibrils,v1,2025-02-04,Biochemistry,Protein Science,10.1002/pro.70150,2025-06,73,4.657,6.35,extracted_data/February_2025/10.1101_2025.02.04.636406_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.07.636353_v3,10.1101/2025.02.07.636353,Elucidation and de novo Reconstitution of Glyceollin Biosynthesis,v3,2025-02-07,Biochemistry,Molecular Plant,10.1016/j.molp.2025.04.003,2025-05,57,5.519,13.75,extracted_data/March_2025/10.1101_2025.02.07.636353_v3.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.08.637243_v2,10.1101/2025.02.08.637243,"Flavoaffinins, elusive cellulose-binding natural products from an anaerobic bacterium",v2,2025-02-08,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c15360,2026-01-28,55,5.554,15.01,extracted_data/November_2025/10.1101_2025.02.08.637243_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.09.637231_v1,10.1101/2025.02.09.637231,Molecular basis of vitamin K-dependent protein γ-glutamyl carboxylation,v1,2025-02-09,Biochemistry,Cell Research,10.1038/s41422-025-01185-6,2025-09-29,27,8.740,9.06,extracted_data/February_2025/10.1101_2025.02.09.637231_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.20.638879_v1,10.1101/2025.02.20.638879,Chemical inhibition of a bacterial immune system,v1,2025-02-20,Biochemistry,Cell Host & Microbe,10.1016/j.chom.2026.01.003,2026-02,38,7.067,11.68,extracted_data/February_2025/10.1101_2025.02.20.638879_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.21.639315_v1,10.1101/2025.02.21.639315,Distal mutations enhance catalysis in designed enzymes by facilitating substrate binding and product release,v1,2025-02-21,Biochemistry,Nature Communications,10.1038/s41467-025-63802-7,2025-09-30,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.21.639315_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.23.639758_v1,10.1101/2025.02.23.639758,Nitric Oxide Inhibition of Glycyl Radical Enzymes and Their Activases,v1,2025-02-23,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.4c14786,2025-04-09,55,5.554,15.01,extracted_data/February_2025/10.1101_2025.02.23.639758_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.24.639257_v1,10.1101/2025.02.24.639257,Expanding the Tubulin Code: TTLL11 Polyglutamylase Drives Elongation of Primary Tubulin Chains,v1,2025-02-24,Biochemistry,Science Advances,10.1126/sciadv.adw1561,2025-08-22,79,4.324,12.06,extracted_data/February_2025/10.1101_2025.02.24.639257_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.24.639818_v1,10.1101/2025.02.24.639818,Caging-group-free photoactivatable fluorophores with far-red emission,v1,2025-02-24,Biochemistry,Chem,10.1016/j.chempr.2025.102866,2026-02,49,6.010,12.97,extracted_data/February_2025/10.1101_2025.02.24.639818_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.25.640204_v1,10.1101/2025.02.25.640204,"Cryo-EM structures of the Plant Augmin reveal its intertwined coiled-coil assembly, antiparallel dimerization and NEDD1 binding mechanisms",v1,2025-02-25,Biochemistry,Nature Communications,10.1038/s41467-025-66332-4,2025-12-12,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.25.640204_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.26.640389_v1,10.1101/2025.02.26.640389,Succinate dehydrogenase activity supports de novo purine synthesis,v1,2025-02-26,Biochemistry,Molecular Cell,10.1016/j.molcel.2025.10.002,2025-11,26,9.051,12.04,extracted_data/March_2025/10.1101_2025.02.26.640389_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.26.640412_v2,10.1101/2025.02.26.640412,An elevated level of the mRNA exporter Mex67-Mtr2 in nuclear mRNPs impairs nuclear mRNA export,v2,2025-02-26,Biochemistry,Nucleic Acids Research,10.1093/nar/gkag025,2026-01-22,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.02.26.640412_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.02.27.640681_v1,10.1101/2025.02.27.640681,Deep learning guided design of protease substrates,v1,2025-02-27,Biochemistry,Nature Communications,10.1038/s41467-025-67226-1,2026-01-06,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.02.27.640681_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.05.641597_v1,10.1101/2025.03.05.641597,A pharmacological modality to sequester homomeric proteins,v1,2025-03-05,Biochemistry,Nature Chemical Biology,10.1038/s41589-026-02141-0,2026-02-05,56,5.521,7.32,extracted_data/March_2025/10.1101_2025.03.05.641597_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.10.642389_v1,10.1101/2025.03.10.642389,Chemoenzymatic Synthesis of Glycosphingolipids having an HNK-1 Epitope for Erythrocyte Cell Surface Remodeling,v1,2025-03-10,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c04179,2025-07-23,55,5.554,15.01,extracted_data/March_2025/10.1101_2025.03.10.642389_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.13.643021_v1,10.1101/2025.03.13.643021,Design of proteins by parallel tempering in the sequence space,v1,2025-03-13,Biochemistry,Protein Science,10.1002/pro.70246,2025-10,73,4.657,6.35,extracted_data/March_2025/10.1101_2025.03.13.643021_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.13.643185_v1,10.1101/2025.03.13.643185,Macrocyclic phage display for identification of selective protease substrates,v1,2025-03-13,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c04424,2025-07-30,55,5.554,15.01,extracted_data/March_2025/10.1101_2025.03.13.643185_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.15.641049_v1,10.1101/2025.03.15.641049,PAF15-PCNA assembly exhaustion governs lagging strand replication and replisome integrity,v1,2025-03-15,Biochemistry,Nature,10.1038/s41586-025-10011-3,2026-03-12,7,18.288,18.47,extracted_data/March_2025/10.1101_2025.03.15.641049_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.17.643602_v2,10.1101/2025.03.17.643602,Ubiquilin-2 liquid droplets catalyze α-synuclein fibril formation,v2,2025-03-17,Biochemistry,The EMBO Journal,10.1038/s44318-025-00591-1,2025-10-14,68,4.821,7.14,extracted_data/July_2025/10.1101_2025.03.17.643602_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.17.643635_v1,10.1101/2025.03.17.643635,The non-catalytic ε DNA polymerase subunit is an NPF motif recognition protein,v1,2025-03-17,Biochemistry,Nature Communications,10.1038/s41467-025-67284-5,2025-12-13,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.17.643635_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.17.643699_v1,10.1101/2025.03.17.643699,The two-step purification method ViREn identifies a single NSUN6-mediated 5-methylcytosine modification promoting dengue virus RNA genome turnover,v1,2025-03-17,Biochemistry,Nucleic Acids Research,10.1093/nar/gkag003,2026-01-14,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.17.643699_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.17.643706_v1,10.1101/2025.03.17.643706,Protein dynamics affect O2-stability of Group B [FeFe]-hydrogenase from Thermosediminibacter oceani,v1,2025-03-17,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.4c18483,2025-05-07,55,5.554,15.01,extracted_data/March_2025/10.1101_2025.03.17.643706_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.17.643765_v1,10.1101/2025.03.17.643765,Temporally Resolved and Interpretable Machine Learning Model of GPCR conformational transition,v1,2025-03-17,Biochemistry,Nature Communications,10.1038/s41467-025-66958-4,2025-12-06,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.17.643765_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.18.643929_v2,10.1101/2025.03.18.643929,Dissecting Bioelectrical Networks in Photosynthetic Membranes with Electrochemistry,v2,2025-03-18,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c08519,2025-07-30,55,5.554,15.01,extracted_data/May_2025/10.1101_2025.03.18.643929_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.19.642201_v2,10.1101/2025.03.19.642201,Discovery of novel covalent ligands with AlphaFold3,v2,2025-03-19,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c22222,2026-04-01,55,5.554,15.01,extracted_data/December_2025/10.1101_2025.03.19.642201_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.20.644374_v1,10.1101/2025.03.20.644374,Seal milk oligosaccharides rival human milk complexity and exhibit functional dynamics during lactation,v1,2025-03-20,Biochemistry,Nature Communications,10.1038/s41467-025-66075-2,2025-11-25,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.20.644374_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.23.644851_v1,10.1101/2025.03.23.644851,CRISPR-Cas12a REC2 – NUC interactions drive target-strand cleavage and constrain trans cleavage,v1,2025-03-23,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf988,2025-09-23,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.23.644851_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.24.644901_v1,10.1101/2025.03.24.644901,Substrate recognition by human separase,v1,2025-03-24,Biochemistry,Science Advances,10.1126/sciadv.ady9807,2025-11-14,79,4.324,12.06,extracted_data/March_2025/10.1101_2025.03.24.644901_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.24.645050_v1,10.1101/2025.03.24.645050,PCMT1 generates the C-terminal cyclic imide degron on CRBN substrates,v1,2025-03-24,Biochemistry,Nature Chemical Biology,10.1038/s41589-025-02106-9,2025-12-29,56,5.521,7.32,extracted_data/March_2025/10.1101_2025.03.24.645050_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.25.645352_v1,10.1101/2025.03.25.645352,Structural Basis of CSN-mediated SCF Deneddylation,v1,2025-03-25,Biochemistry,Nature Communications,10.1038/s41467-025-67566-y,2026-01-23,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.25.645352_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.25.645370_v1,10.1101/2025.03.25.645370,Rational design of a foldon-derived heterotrimer guided by quantitative native mass spectrometry,v1,2025-03-25,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c06094,2025-07-09,55,5.554,15.01,extracted_data/March_2025/10.1101_2025.03.25.645370_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.26.645365_v1,10.1101/2025.03.26.645365,Protease mimicry: dissecting the ester bond crosslinking mechanics in bacterial adhesin proteins,v1,2025-03-26,Biochemistry,Protein Science,10.1002/pro.70238,2025-08,73,4.657,6.35,extracted_data/March_2025/10.1101_2025.03.26.645365_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.28.645989_v1,10.1101/2025.03.28.645989,N-terminal acetylation of superoxide dismutase 1 accelerates amyloid formation without general destabilization of the apo-state,v1,2025-03-28,Biochemistry,Protein Science,10.1002/pro.70267,2025-09,73,4.657,6.35,extracted_data/March_2025/10.1101_2025.03.28.645989_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.03.29.646096_v1,10.1101/2025.03.29.646096,NUDT5 regulates purine metabolism and thiopurine sensitivity by interacting with PPAT,v1,2025-03-29,Biochemistry,Science,10.1126/science.adx9717,2025-12-11,19,10.416,15.26,extracted_data/April_2025/10.1101_2025.03.29.646096_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.04.03.647152_v2,10.1101/2025.04.03.647152,A transfer RNA methyltransferase with an unusual domain composition catalyzes 2′-O-methylation at position 6 in tRNA,v2,2025-04-03,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf579,2025-07-08,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.04.03.647152_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.04.09.648013_v1,10.1101/2025.04.09.648013,"Deltex and RING-UIM E3 ligases cooperate to create a ubiquitin-ADP-ribose hybrid mark on tankyrase, promoting its stabilization",v1,2025-04-09,Biochemistry,Science Advances,10.1126/sciadv.adx7172,2025-09-05,79,4.324,12.06,extracted_data/April_2025/10.1101_2025.04.09.648013_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.04.09.648075_v2,10.1101/2025.04.09.648075,Atom level enzyme active site scaffolding using RFdiffusion2,v2,2025-04-09,Biochemistry,Nature Methods,10.1038/s41592-025-02975-x,2026-01,8,17.251,13.51,extracted_data/April_2025/10.1101_2025.04.09.648075_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.04.15.648952_v1,10.1101/2025.04.15.648952,Distinct mechanisms underlying extrachromosomal telomere DNA generation in ALT cancers,v1,2025-04-15,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf771,2025-08-11,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.04.15.648952_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.04.22.649986_v1,10.1101/2025.04.22.649986,Discovery of RNA-Reactive Small Molecules Guides Design of Electrophilic Modules for RNA-Specific Covalent Binders,v1,2025-04-22,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c06802,2025-09-24,55,5.554,15.01,extracted_data/April_2025/10.1101_2025.04.22.649986_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.04.23.650295_v1,10.1101/2025.04.23.650295,Positive cooperativity between RAS-binding and cysteine-rich domains regulates RAF membrane binding kinetics via lateral rebinding,v1,2025-04-23,Biochemistry,Nature Communications,10.1038/s41467-026-69437-6,2026-02-10,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.23.650295_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.04.24.648904_v1,10.1101/2025.04.24.648904,The essential co-chaperone Sgt1 regulates client dwell time in the Hsp90 chaperone cycle,v1,2025-04-24,Biochemistry,Molecular Cell,10.1016/j.molcel.2025.12.002,2026-01,26,9.051,12.04,extracted_data/April_2025/10.1101_2025.04.24.648904_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.04.25.650601_v1,10.1101/2025.04.25.650601,High-throughput chemical proteomics workflow for profiling protein citrullination dynamics,v1,2025-04-25,Biochemistry,Nature Communications,10.1038/s41467-026-69490-1,2026-02-21,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.25.650601_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.04.29.651129_v1,10.1101/2025.04.29.651129,Nucleosome context regulates chromatin reader preference,v1,2025-04-29,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf1061,2025-10-28,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.04.29.651129_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.04.29.651198_v1,10.1101/2025.04.29.651198,The kinase domain of RIPK3 tunes its scaffolding functions,v1,2025-04-29,Biochemistry,Cell Death & Differentiation,10.1038/s41418-026-01677-x,2026-02-03,67,4.866,14.45,extracted_data/April_2025/10.1101_2025.04.29.651198_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.09.652838_v2,10.1101/2025.05.09.652838,Structural mechanisms of allosteric regulation in the human cis-prenyltransferase complex,v2,2025-05-09,Biochemistry,Nature Communications,10.1038/s41467-025-65833-6,2025-11-28,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.09.652838_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.09.653017_v1,10.1101/2025.05.09.653017,DNA-binding and dimerization of the SOG1 NAC domain are functionally linked with its ability to undergo liquid-liquid phase separation,v1,2025-05-09,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf1522,2026-01-14,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.09.653017_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.10.652895_v1,10.1101/2025.05.10.652895,Phosphorylation-inducing molecules for regulating dynamic cellular processes,v1,2025-05-10,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c04275,2025-07-23,55,5.554,15.01,extracted_data/May_2025/10.1101_2025.05.10.652895_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.12.653381_v1,10.1101/2025.05.12.653381,Structural mechanism of insulin receptor activation by a dimeric aptamer agonist,v1,2025-05-12,Biochemistry,Experimental & Molecular Medicine,10.1038/s12276-025-01494-1,2025-07-02,97,4.001,12.18,extracted_data/May_2025/10.1101_2025.05.12.653381_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.12.653571_v1,10.1101/2025.05.12.653571,DNA extrusion size determines pathway choice during CAG repeat expansion,v1,2025-05-12,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf1393,2025-11-26,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.12.653571_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.14.654035_v1,10.1101/2025.05.14.654035,Mycobacterial EtfD contains an unusual linear [3Fe-4S] cluster and enables β-oxidation to drive proton pumping by the electron transport chain,v1,2025-05-14,Biochemistry,The EMBO Journal,10.1038/s44318-026-00726-y,2026-03-17,68,4.821,7.14,extracted_data/May_2025/10.1101_2025.05.14.654035_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.16.654576_v1,10.1101/2025.05.16.654576,Genetic Code Expansion and Enzymatic Modifications as Accessible Methods for Studying Site-Specific Post-Translational Modifications of Alpha-Synuclein and Tau,v1,2025-05-16,Biochemistry,Protein Science,10.1002/pro.70302,2025-10,73,4.657,6.35,extracted_data/May_2025/10.1101_2025.05.16.654576_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.19.654926_v1,10.1101/2025.05.19.654926,ADAM-tRNA-seq: An Optimized Approach for Demultiplexing and Enhanced Hierarchal Mapping in Direct tRNA Sequencing,v1,2025-05-19,Biochemistry,Nucleic Acids Research,10.1093/nar/gkag022,2026-01-22,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.19.654926_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.20.655039_v1,10.1101/2025.05.20.655039,The interaction of XPG with TFIIH through p62 and XPD is required for the completion of nucleotide excision repair,v1,2025-05-20,Biochemistry,Nucleic Acids Research,10.1093/nar/gkag078,2026-02-05,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.20.655039_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.20.655041_v1,10.1101/2025.05.20.655041,De novo sequencing of complex glycans by ion mobility-mass spectrometry using a self-expanding reference database,v1,2025-05-20,Biochemistry,Nature Communications,10.1038/s41467-025-67069-w,2025-12-13,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.20.655041_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.24.655970_v1,10.1101/2025.05.24.655970,Chemical capture of diazo metabolites reveals biosynthetic hydrazone oxidation,v1,2025-05-24,Biochemistry,Nature,10.1038/s41586-025-10079-x,2026-04-09,7,18.288,18.47,extracted_data/May_2025/10.1101_2025.05.24.655970_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.26.656154_v1,10.1101/2025.05.26.656154,Critical structural perturbations of ribozyme active sites induced by 2’-O-methylation commonly used in structural studies,v1,2025-05-26,Biochemistry,Nucleic Acids Research,10.1093/nar/gkag046,2026-01-22,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.26.656154_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.05.27.656346_v1,10.1101/2025.05.27.656346,The ribosome synchronizes folding and assembly to promote oligomeric protein biogenesis,v1,2025-05-27,Biochemistry,Molecular Cell,10.1016/j.molcel.2025.12.022,2026-02,26,9.051,12.04,extracted_data/May_2025/10.1101_2025.05.27.656346_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.06.02.657306_v1,10.1101/2025.06.02.657306,Spatial metabolic gradients in the liver and small intestine,v1,2025-06-02,Biochemistry,Nature,10.1038/s41586-025-09616-5,2025-12-04,7,18.288,18.47,extracted_data/June_2025/10.1101_2025.06.02.657306_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.06.05.658054_v1,10.1101/2025.06.05.658054,"Correlating membrane-protein dynamics with function: Integrating bioinformatics, molecular dynamics, and single-molecule FRET",v1,2025-06-05,Biochemistry,Protein Science,10.1002/pro.70352,2025-11,73,4.657,6.35,extracted_data/June_2025/10.1101_2025.06.05.658054_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.06.08.658478_v2,10.1101/2025.06.08.658478,Mechanisms of KCNQ1 gating modulation by KCNE1/3 for cell-specific function,v2,2025-06-08,Biochemistry,Cell Research,10.1038/s41422-025-01152-1,2025-07-31,27,8.740,9.06,extracted_data/June_2025/10.1101_2025.06.08.658478_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.06.10.658861_v2,10.1101/2025.06.10.658861,Collaboration between two conserved sequence motifs drives ATPase stimulation of Hsp90 by Aha1,v2,2025-06-10,Biochemistry,Protein Science,10.1002/pro.70359,2025-11,73,4.657,6.35,extracted_data/June_2025/10.1101_2025.06.10.658861_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.06.11.659021_v1,10.1101/2025.06.11.659021,Structure of a pH-sensitive pentameric ligand-gated ion channel from the Sarcoptes scabies mite,v1,2025-06-11,Biochemistry,Nature Communications,10.1038/s41467-026-70575-0,2026-03-13,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.11.659021_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.06.18.660367_v1,10.1101/2025.06.18.660367,Structural and functional clues challenge the hypothesis that the yjdF riboswitch is natively regulated through broad recognition of azaaromatic compounds,v1,2025-06-18,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf1278,2025-11-13,34,7.776,16.90,extracted_data/June_2025/10.1101_2025.06.18.660367_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.06.19.660637_v1,10.1101/2025.06.19.660637,COOKIE-Pro: Covalent Inhibitor Binding Kinetics Profiling on the Proteome Scale,v1,2025-06-19,Biochemistry,Nature Communications,10.1038/s41467-025-63491-2,2025-09-30,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.19.660637_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.06.24.661284_v1,10.1101/2025.06.24.661284,Halogen bonds between ligands and proteins: can we use them in validation?,v1,2025-06-24,Biochemistry,Protein Science,10.1002/pro.70321,2025-11,73,4.657,6.35,extracted_data/June_2025/10.1101_2025.06.24.661284_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.02.662799_v3,10.1101/2025.07.02.662799,The pathogenic E139D mutation stabilizes a non-canonical active state of the multi-domain phosphatase SHP2,v3,2025-07-02,Biochemistry,Protein Science,10.1002/pro.70373,2025-12,73,4.657,6.35,extracted_data/October_2025/10.1101_2025.07.02.662799_v3.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.03.663076_v2,10.1101/2025.07.03.663076,A Pipeline for Screening Small Molecule-Enhanced Protein Stability in A Bacterial Orphan Receptor,v2,2025-07-03,Biochemistry,Protein Science,10.1002/pro.70330,2025-11,73,4.657,6.35,extracted_data/September_2025/10.1101_2025.07.03.663076_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.07.663574_v2,10.1101/2025.07.07.663574,Optimizing stability in dynamic small-molecule binding proteins,v2,2025-07-07,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c19571,2026-01-14,55,5.554,15.01,extracted_data/November_2025/10.1101_2025.07.07.663574_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.17.665281_v1,10.1101/2025.07.17.665281,Structure and mechanism of the broad spectrum CRISPR-associated ring nuclease Crn4,v1,2025-07-17,Biochemistry,Nature Communications,10.1038/s41467-025-67607-6,2025-12-15,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.17.665281_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.22.666085_v2,10.1101/2025.07.22.666085,UBE2J2 sensitizes the ERAD ubiquitination cascade to changes in membrane lipid saturation,v2,2025-07-22,Biochemistry,Nature Communications,10.1038/s41467-025-64777-1,2025-10-09,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.07.22.666085_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.23.666395_v1,10.1101/2025.07.23.666395,Recognition of small Tim chaperones by the mitochondrial Yme1 protease,v1,2025-07-23,Biochemistry,Protein Science,10.1002/pro.70445,2026-02,73,4.657,6.35,extracted_data/July_2025/10.1101_2025.07.23.666395_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.25.666769_v1,10.1101/2025.07.25.666769,Molecular requirements for PLK1 activation by T-loop phosphorylation,v1,2025-07-25,Biochemistry,The EMBO Journal,10.1038/s44318-025-00681-0,2026-01-28,68,4.821,7.14,extracted_data/July_2025/10.1101_2025.07.25.666769_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.25.666770_v2,10.1101/2025.07.25.666770,Molecular basis for the activation of Aurora A and Plk1 kinases during mitotic entry,v2,2025-07-25,Biochemistry,The EMBO Journal,10.1038/s44318-025-00679-8,2026-01-28,68,4.821,7.14,extracted_data/July_2025/10.1101_2025.07.25.666770_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.27.667080_v1,10.1101/2025.07.27.667080,NAC controls nascent chain fate through tunnel sensing and chaperone action,v1,2025-07-27,Biochemistry,Nature,10.1038/s41586-025-10058-2,2026-04-02,7,18.288,18.47,extracted_data/August_2025/10.1101_2025.07.27.667080_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.28.667264_v1,10.1101/2025.07.28.667264,CH•••S hydrogen bonds drive molecular recognition of ergothioneine by the microbial transporter,v1,2025-07-28,Biochemistry,Science Advances,10.1126/sciadv.aeb0426,2026-02-20,79,4.324,12.06,extracted_data/August_2025/10.1101_2025.07.28.667264_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.29.667442_v1,10.1101/2025.07.29.667442,Structure of ATTRv-F64S fibrils isolated from skin tissue of a living patient,v1,2025-07-29,Biochemistry,Nature Communications,10.1038/s41467-025-67457-2,2025-12-16,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.29.667442_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.30.667769_v1,10.1101/2025.07.30.667769,Modulation of the 14-3-3σ/C-RAF “auto”inhibited complex by molecular glues,v1,2025-07-30,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c12622,2026-02-11,55,5.554,15.01,extracted_data/August_2025/10.1101_2025.07.30.667769_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.07.31.667456_v1,10.1101/2025.07.31.667456,Cooperativity and Communication between the Active Sites of the Dimeric SARS-CoV-2 Main Protease,v1,2025-07-31,Biochemistry,Science Advances,10.1126/sciadv.aeb0769,2026-01-16,79,4.324,12.06,extracted_data/August_2025/10.1101_2025.07.31.667456_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.08.01.667930_v1,10.1101/2025.08.01.667930,"Structures of Naked Mole-Rat, Tuco-Tuco, and Guinea Pig Ribosomes–Is rRNA Fragmentation Linked to Translational Fidelity?",v1,2025-08-01,Biochemistry,Nucleic Acids Research,10.1093/nar/gkag006,2026-01-22,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.01.667930_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.08.01.668122_v1,10.1101/2025.08.01.668122,Structure-Guided Design of a Bioactive Covalent Small Molecule Targeting a Riboswitch,v1,2025-08-01,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c13219,2025-10-22,55,5.554,15.01,extracted_data/August_2025/10.1101_2025.08.01.668122_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.08.07.669115_v1,10.1101/2025.08.07.669115,Structural insights into C3 convertase activity of the classical pathway of complement,v1,2025-08-07,Biochemistry,Nature Communications,10.1038/s41467-025-67730-4,2025-12-18,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.08.07.669115_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.08.19.671153_v1,10.1101/2025.08.19.671153,Structures of two LarA-like nickel-pincer nucleotide cofactor-utilizing enzymes with a single catalytic histidine residue,v1,2025-08-19,Biochemistry,Protein Science,10.1002/pro.70362,2025-12,73,4.657,6.35,extracted_data/August_2025/10.1101_2025.08.19.671153_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.08.21.671373_v1,10.1101/2025.08.21.671373,Divergent viral phosphodiesterases for immune signaling evasion,v1,2025-08-21,Biochemistry,Cell Host & Microbe,10.1016/j.chom.2025.10.018,2025-12,38,7.067,11.68,extracted_data/August_2025/10.1101_2025.08.21.671373_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.08.21.671592_v2,10.1101/2025.08.21.671592,Chemical mechanism of allosteric and asymmetric dark reversion in a bacterial phytochrome uncovered by cryo-EM,v2,2025-08-21,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c17531,2025-12-10,55,5.554,15.01,extracted_data/November_2025/10.1101_2025.08.21.671592_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.08.25.671740_v3,10.1101/2025.08.25.671740,Recognition and remodelling of nucleosomes and hexasomes by the human INO80 complex,v3,2025-08-25,Biochemistry,Nucleic Acids Research,10.1093/nar/gkag138,2026-02-24,34,7.776,16.90,extracted_data/February_2026/10.1101_2025.08.25.671740_v3.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.08.29.672156_v2,10.1101/2025.08.29.672156,Concentration-Dependent Mutational Scanning Probes the Cellular Folding Landscape of α-Synuclein in Yeast,v2,2025-08-29,Biochemistry,Protein Science,10.1002/pro.70456,2026-02,73,4.657,6.35,extracted_data/December_2025/10.1101_2025.08.29.672156_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.08.29.673048_v1,10.1101/2025.08.29.673048,Impact of 2′-deoxyribo-purine substrates on nonenzymatic RNA template-directed primer extension,v1,2025-08-29,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf1228,2025-11-13,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.29.673048_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.08.29.673142_v1,10.1101/2025.08.29.673142,Fluorogenic Covalent Probes for RNA,v1,2025-08-29,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c14938,2025-12-03,55,5.554,15.01,extracted_data/August_2025/10.1101_2025.08.29.673142_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.09.03.674030_v1,10.1101/2025.09.03.674030,The Biosynthetic Pathway to the Pyrroloiminoquinone Marine Natural Product Ammosamide C,v1,2025-09-03,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c15504,2025-12-17,55,5.554,15.01,extracted_data/September_2025/10.1101_2025.09.03.674030_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.09.05.674404_v1,10.1101/2025.09.05.674404,Membrane binding of a cyanobacterial ESCRT-III protein crucially involves the helix α1-3 hairpin conserved in all superfamily members,v1,2025-09-05,Biochemistry,Protein Science,10.1002/pro.70387,2025-12,73,4.657,6.35,extracted_data/September_2025/10.1101_2025.09.05.674404_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.09.13.676020_v1,10.1101/2025.09.13.676020,Measurement and Control of Crossed Potentials in a Flavoprotein,v1,2025-09-13,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c16043,2026-02-11,55,5.554,15.01,extracted_data/September_2025/10.1101_2025.09.13.676020_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.09.16.674391_v2,10.1101/2025.09.16.674391,Non-hydrolyzable acetyllysine analogs to study protein acetylation in vitro and in cells,v2,2025-09-16,Biochemistry,Nature Communications,10.1038/s41467-026-69782-6,2026-02-21,71,4.761,14.63,extracted_data/September_2025/10.1101_2025.09.16.674391_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.09.16.676614_v1,10.1101/2025.09.16.676614,"Structure of the Disulfide-rich Modules of a Striking Tandem Repeat Protein, Avian Cysteine-Rich Eggshell Membrane Protein",v1,2025-09-16,Biochemistry,Protein Science,10.1002/pro.70431,2026-01,73,4.657,6.35,extracted_data/September_2025/10.1101_2025.09.16.676614_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.09.18.677238_v1,10.1101/2025.09.18.677238,"Cardiomyopathy-Associated and Basic Residue Mutations in Myopalladin Alter Actin Binding, Bundling, and Structural Stability",v1,2025-09-18,Biochemistry,Protein Science,10.1002/pro.70490,2026-02,73,4.657,6.35,extracted_data/September_2025/10.1101_2025.09.18.677238_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.09.26.678779_v1,10.1101/2025.09.26.678779,Structural mechanism of mRNA decoding by mammalian GTPase GTPBP1,v1,2025-09-26,Biochemistry,Nature Communications,10.1038/s41467-025-66833-2,2025-12-05,71,4.761,14.63,extracted_data/September_2025/10.1101_2025.09.26.678779_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.09.29.679232_v2,10.1101/2025.09.29.679232,Helicase-mediated mechanism of SSU processome maturation and disassembly,v2,2025-09-29,Biochemistry,Nature,10.1038/s41586-025-09688-3,2025-12-18,7,18.288,18.47,extracted_data/October_2025/10.1101_2025.09.29.679232_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.10.10.681645_v1,10.1101/2025.10.10.681645,Macrocyclic Peptides Containing an Imidazopyridinium (IP+) Unit Display Enhanced Passive Cell Permeability,v1,2025-10-10,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c17859,2026-04-08,55,5.554,15.01,extracted_data/October_2025/10.1101_2025.10.10.681645_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.10.15.682667_v1,10.1101/2025.10.15.682667,Human Dicer1 hotspot mutation induces both loss and gain of miRNA function,v1,2025-10-15,Biochemistry,Nature Structural & Molecular Biology,10.1038/s41594-025-01701-7,2025-12,48,6.187,6.42,extracted_data/October_2025/10.1101_2025.10.15.682667_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.10.22.683608_v2,10.1101/2025.10.22.683608,SELEX-HTCFQ Platform: Developing DNA Enhancers of ADAR1 to Suppress ZBP1-Dependent Immunopathology,v2,2025-10-22,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c18671,2025-12-03,55,5.554,15.01,extracted_data/November_2025/10.1101_2025.10.22.683608_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.10.24.684486_v1,10.1101/2025.10.24.684486,Nuc domain electrostatics drive the trans cleavage activity of CRISPR-Cas12a,v1,2025-10-24,Biochemistry,Nucleic Acids Research,10.1093/nar/gkaf1485,2026-01-05,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.10.24.684486_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.10.30.685615_v2,10.1101/2025.10.30.685615,Oxidative Peptide Backbone Cleavage by a HEXXH Enzyme During RiPP Biosynthesis,v2,2025-10-30,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c19246,2026-01-28,55,5.554,15.01,extracted_data/December_2025/10.1101_2025.10.30.685615_v2.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.11.03.686045_v1,10.1101/2025.11.03.686045,Cation-Cation Photosensitization for Protein Ligation and Intracellular Catalysis,v1,2025-11-03,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c19565,2026-02-25,55,5.554,15.01,extracted_data/November_2025/10.1101_2025.11.03.686045_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.1101_2025.11.11.687626_v1,10.1101/2025.11.11.687626,Ancestral neuronal receptors are bacterial accessory toxins,v1,2025-11-11,Biochemistry,Nature Communications,10.1038/s41467-026-69246-x,2026-02-14,71,4.761,14.63,extracted_data/November_2025/10.1101_2025.11.11.687626_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.64898_2025.12.11.693737_v1,10.64898/2025.12.11.693737,Chemical proteomics reveals regulation of bile salt hydrolases via oxidative post-translational modifications,v1,2025-12-11,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c18912,2026-02-11,55,5.554,15.01,extracted_data/December_2025/10.64898_2025.12.11.693737_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.64898_2026.01.21.700944_v1,10.64898/2026.01.21.700944,Engaging Unstabilized Alkyl Radicals with Pyridoxal Radical Biocatalysis: Enantiodivergent Synthesis of Aliphatic Non-Canonical Amino Acids,v1,2026-01-21,Biochemistry,Journal of the American Chemical Society,10.1021/jacs.5c16304,2026-02-11,55,5.554,15.01,extracted_data/January_2026/10.64898_2026.01.21.700944_v1.xml,top100_bgm_multi_journals.csv
biochemistry,10.64898_2026.02.19.706790_v3,10.64898/2026.02.19.706790,A druggable redox switch on SHP1 controls macrophage inflammation,v3,2026-02-19,Biochemistry,Nature Chemical Biology,10.1038/s41589-026-02163-8,2026-03-12,56,5.521,7.32,extracted_data/February_2026/10.64898_2026.02.19.706790_v3.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.10.02.615251_v1,10.1101/2024.10.02.615251,Determining sex differences in drug combinations targeting aortic valve myofibroblast activation using an artificial intelligence derived platform,v1,2024-10-02,Bioengineering,Science Advances,10.1126/sciadv.adu2695,2025-06-06,79,4.324,12.06,extracted_data/October_2024/10.1101_2024.10.02.615251_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.10.02.616360_v1,10.1101/2024.10.02.616360,Ultrasensitive in vivo infrared spectroscopic imaging via oblique photothermal microscopy,v1,2024-10-02,Bioengineering,Nature Communications,10.1038/s41467-025-61332-w,2025-07-02,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.02.616360_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.10.03.616318_v1,10.1101/2024.10.03.616318,Bottlebrush polymers with sequence-controlled backbones for enhanced oligonucleotide delivery,v1,2024-10-03,Bioengineering,Journal of the American Chemical Society,10.1021/jacs.4c13285,2024-12-18,55,5.554,15.01,extracted_data/October_2024/10.1101_2024.10.03.616318_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.10.07.617068_v1,10.1101/2024.10.07.617068,Tuning Insulin Receptor Signaling Using De Novo Designed Agonists,v1,2024-10-07,Bioengineering,Molecular Cell,10.1016/j.molcel.2025.09.020,2025-11,26,9.051,12.04,extracted_data/October_2024/10.1101_2024.10.07.617068_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.10.18.619117_v1,10.1101/2024.10.18.619117,Packaged delivery of CRISPR-Cas9 ribonucleoproteins accelerates genome editing,v1,2024-10-18,Bioengineering,Nucleic Acids Research,10.1093/nar/gkaf105,2025-02-27,34,7.776,16.90,extracted_data/October_2024/10.1101_2024.10.18.619117_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.10.24.619774_v1,10.1101/2024.10.24.619774,Evaluation of Machine Learning-Assisted Directed Evolution Across Diverse Combinatorial Landscapes,v1,2024-10-24,Bioengineering,Cell Systems,10.1016/j.cels.2025.101387,2025-09,65,4.943,5.72,extracted_data/October_2024/10.1101_2024.10.24.619774_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.10.29.620971_v1,10.1101/2024.10.29.620971,Accelerating Cell Culture Media Development Using Bayesian Optimization-Based Iterative Experimental Design,v1,2024-10-29,Bioengineering,Nature Communications,10.1038/s41467-025-61113-5,2025-07-01,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.10.29.620971_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.10.29.620998_v1,10.1101/2024.10.29.620998,Tunable differentiation of human CD4+ and CD8+ T cells from pluripotent stem cells,v1,2024-10-29,Bioengineering,Cell Stem Cell,10.1016/j.stem.2025.12.010,2026-01,23,9.313,12.67,extracted_data/November_2024/10.1101_2024.10.29.620998_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.10.30.621148_v1,10.1101/2024.10.30.621148,Multiplexed Ultrasound Imaging of Gene Expression,v1,2024-10-30,Bioengineering,Nature Methods,10.1038/s41592-025-02825-w,2025-12,8,17.251,13.51,extracted_data/November_2024/10.1101_2024.10.30.621148_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.11.08.622572_v1,10.1101/2024.11.08.622572,Physical vitrification and nanowarming at human organ scale to enable cryopreservation,v1,2024-11-08,Bioengineering,Nature Communications,10.1038/s41467-025-63483-2,2025-09-26,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.08.622572_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.11.12.623289_v1,10.1101/2024.11.12.623289,"Wound state monitoring by multiplexed, electrochemical, real-time, localized, inflammation-tracking nitric oxide sensor (MERLIN)",v1,2024-11-12,Bioengineering,Science Advances,10.1126/sciadv.adv2385,2025-05-30,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.12.623289_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.11.13.623331_v1,10.1101/2024.11.13.623331,Universal base editing for hemophilia B,v1,2024-11-13,Bioengineering,Blood,10.1182/blood.2024027870,2026-01-22,51,5.823,7.31,extracted_data/November_2024/10.1101_2024.11.13.623331_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.11.16.623599_v2,10.1101/2024.11.16.623599,"A nucleic acid prodrug that activates mitochondrial respiration, promotes stress resilience, and prolongs lifespan",v2,2024-11-16,Bioengineering,Journal of the American Chemical Society,10.1021/jacs.5c06772,2025-06-25,55,5.554,15.01,extracted_data/May_2025/10.1101_2024.11.16.623599_v2.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.11.21.624393_v1,10.1101/2024.11.21.624393,RNA-Stabilized Coat Proteins for Sensitive and Simultaneous Imaging of Distinct Single mRNAs in Live Cells,v1,2024-11-21,Bioengineering,Nature Methods,10.1038/s41592-025-02782-4,2026-01,8,17.251,13.51,extracted_data/November_2024/10.1101_2024.11.21.624393_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.11.21.624667_v1,10.1101/2024.11.21.624667,Cardiolipin-mimic lipid nanoparticles without antibody modification delivered senolytic in-vivo CAR-T therapy for inflamm-aging,v1,2024-11-21,Bioengineering,Cell Reports Medicine,10.1016/j.xcrm.2025.102209,2025-07,92,4.028,8.08,extracted_data/November_2024/10.1101_2024.11.21.624667_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.12.04.626925_v1,10.1101/2024.12.04.626925,Magnetically induced magnetosome chain (MAGiC): A biogenic magnetic-particle-imaging tracer with high performance and navigability,v1,2024-12-04,Bioengineering,Science Advances,10.1126/sciadv.adv2485,2025-08,79,4.324,12.06,extracted_data/December_2024/10.1101_2024.12.04.626925_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.12.05.626963_v1,10.1101/2024.12.05.626963,Engineered coagulation factor VIII with enhanced secretion and coagulation potential for hemophilia A gene therapy,v1,2024-12-05,Bioengineering,Blood,10.1182/blood.2025028481,2026-01-22,51,5.823,7.31,extracted_data/December_2024/10.1101_2024.12.05.626963_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.12.05.627079_v1,10.1101/2024.12.05.627079,A new universal chimeric-antigen receptor (CAR)- fragment antibody binder (FAB) split system for cancer immunotherapy,v1,2024-12-05,Bioengineering,Science Advances,10.1126/sciadv.adv4937,2025-07-04,79,4.324,12.06,extracted_data/December_2024/10.1101_2024.12.05.627079_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.12.14.628484_v3,10.1101/2024.12.14.628484,Cassini: Streamlined and Scalable Method for in situ profiling of RNA and Protein,v3,2024-12-14,Bioengineering,Nature Communications,10.1038/s41467-025-63798-0,2025-10-01,71,4.761,14.63,extracted_data/January_2025/10.1101_2024.12.14.628484_v3.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.12.16.628815_v1,10.1101/2024.12.16.628815,Orthogonal RNA-regulated destabilization domains for three-color RNA imaging with minimal RNA perturbation,v1,2024-12-16,Bioengineering,Nature Methods,10.1038/s41592-025-02905-x,2026-01,8,17.251,13.51,extracted_data/January_2025/10.1101_2024.12.16.628815_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2024.12.19.629496_v4,10.1101/2024.12.19.629496,Elucidating lipid nanoparticle properties and structure through biophysical analyses,v4,2024-12-19,Bioengineering,Nature Biotechnology,10.1038/s41587-025-02855-x,2025-10-23,5,19.006,14.83,extracted_data/October_2025/10.1101_2024.12.19.629496_v4.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.01.09.632182_v1,10.1101/2025.01.09.632182,A Vascularized Liver Microphysiological System Captures Key Features of Hepatic Insulin Resistance and Monocyte Infiltration,v1,2025-01-09,Bioengineering,Nature Communications,10.1038/s41467-025-68031-6,2026-02-03,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.09.632182_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.01.09.632241_v1,10.1101/2025.01.09.632241,Real-time Color Flow Mapping of Ultrasound Microrobots,v1,2025-01-09,Bioengineering,Science Advances,10.1126/sciadv.adt8887,2025-07-18,79,4.324,12.06,extracted_data/January_2025/10.1101_2025.01.09.632241_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.01.09.632260_v2,10.1101/2025.01.09.632260,Assessing Generative Model Coverage of Protein Structures with SHAPES,v2,2025-01-09,Bioengineering,Cell Systems,10.1016/j.cels.2025.101347,2025-08,65,4.943,5.72,extracted_data/January_2025/10.1101_2025.01.09.632260_v2.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.01.20.633942_v1,10.1101/2025.01.20.633942,Protein corona formed on lipid nanoparticles compromises delivery efficiency of mRNA cargo,v1,2025-01-20,Bioengineering,Nature Communications,10.1038/s41467-025-63726-2,2025-09-30,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.20.633942_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.02.11.637741_v1,10.1101/2025.02.11.637741,Reprogrammable 4D Tissue Engineering Hydrogel Scaffold via Reversible Ion Printing,v1,2025-02-11,Bioengineering,Bioactive Materials,10.1016/j.bioactmat.2026.03.011,2026-08,90,4.075,20.82,extracted_data/February_2025/10.1101_2025.02.11.637741_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.02.24.639918_v1,10.1101/2025.02.24.639918,Machine-Guided Dual-Objective Protein Engineering for Deimmunization and Therapeutic Functions,v1,2025-02-24,Bioengineering,Cell Systems,10.1016/j.cels.2025.101299,2025-07,65,4.943,5.72,extracted_data/March_2025/10.1101_2025.02.24.639918_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.02.27.640622_v1,10.1101/2025.02.27.640622,Restoration of ovarian endocrine function with encapsulated immune isolated human ovarian xenograft in ovariectomized mice,v1,2025-02-27,Bioengineering,Science Advances,10.1126/sciadv.adx6348,2026-01-02,79,4.324,12.06,extracted_data/March_2025/10.1101_2025.02.27.640622_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.02.28.640825_v1,10.1101/2025.02.28.640825,Engineered basement membrane mimetic hydrogels to study mammary epithelial morphogenesis and invasion,v1,2025-02-28,Bioengineering,Science Advances,10.1126/sciadv.adx2110,2025-09-26,79,4.324,12.06,extracted_data/March_2025/10.1101_2025.02.28.640825_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.03.02.641040_v2,10.1101/2025.03.02.641040,Magnetically Labeled iPSC-Derived Extracellular Vesicles Enable MRI/MPI-Guided Regenerative Therapy for Myocardial Infarction,v2,2025-03-02,Bioengineering,Journal of Extracellular Vesicles,10.1002/jev2.70178,2025-10,75,4.524,13.60,extracted_data/March_2025/10.1101_2025.03.02.641040_v2.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.03.03.641304_v2,10.1101/2025.03.03.641304,Light-induced assembly and repeatable actuation in Ca2+-driven chemomechanical protein networks,v2,2025-03-03,Bioengineering,Nature Communications,10.1038/s41467-026-69651-2,2026-02-21,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.03.03.641304_v2.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.03.04.641560_v1,10.1101/2025.03.04.641560,Low-Background Cancer Imaging With a Bioorthogonal Fluorescence Probe and Engineered Reporter Enzyme Bearing a Targeting Moiety,v1,2025-03-04,Bioengineering,Journal of the American Chemical Society,10.1021/jacs.5c14173,2026-03-25,55,5.554,15.01,extracted_data/March_2025/10.1101_2025.03.04.641560_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.03.18.643642_v1,10.1101/2025.03.18.643642,Volumetric printed biomimetic scaffolds support in vitro lactation of human milk-derived mammary epithelial cells,v1,2025-03-18,Bioengineering,Science Advances,10.1126/sciadv.adu5793,2025-06-06,79,4.324,12.06,extracted_data/March_2025/10.1101_2025.03.18.643642_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.03.19.644145_v1,10.1101/2025.03.19.644145,Collagen-binding IL-12 expressing STEAP1 CAR-T cells reduce toxicity and eradicate mouse prostate cancer in combination with checkpoint inhibitors,v1,2025-03-19,Bioengineering,Nature Biomedical Engineering,10.1038/s41551-025-01508-3,2025-10-23,21,10.105,21.44,extracted_data/March_2025/10.1101_2025.03.19.644145_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.04.02.646910_v1,10.1101/2025.04.02.646910,Label-free Imaging of the Reversible Rhodopsin Dynamics in a Living Eye,v1,2025-04-02,Bioengineering,Nature Communications,10.1038/s41467-025-65759-z,2025-11-28,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.02.646910_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.04.04.647179_v2,10.1101/2025.04.04.647179,Single-cell multiplex approaches deeply map ON-target CRISPR-genotoxicity and reveal its mitigation by palbociclib and long-term engraftment,v2,2025-04-04,Bioengineering,Nature Communications,10.1038/s41467-025-68177-3,2026-01-10,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.04.04.647179_v2.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.04.21.649806_v1,10.1101/2025.04.21.649806,A Continuously Oxygenated Macroencapsulation System Enables High-Density Packing and Delivery of Insulin-Secreting Cells,v1,2025-04-21,Bioengineering,Nature Communications,10.1038/s41467-025-62271-2,2025-08-11,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.21.649806_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.04.25.650703_v1,10.1101/2025.04.25.650703,Personalized CRISPR Knock-In Cytokine Gene Therapy to Remodel the Tumor Microenvironment and Enhance CAR T Cell Therapy in Solid Tumors,v1,2025-04-25,Bioengineering,Nature Communications,10.1038/s41467-025-67328-w,2025-12-09,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.25.650703_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.04.25.650709_v1,10.1101/2025.04.25.650709,Microengineered transplantation of human solid tumors for in vitro studies of CAR T immunotherapy,v1,2025-04-25,Bioengineering,Nature Biotechnology,10.1038/s41587-025-02845-z,2025-10-17,5,19.006,14.83,extracted_data/April_2025/10.1101_2025.04.25.650709_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.05.06.652311_v1,10.1101/2025.05.06.652311,Dictionary of human intestinal organoid responses to secreted niche factors at single cell resolution,v1,2025-05-06,Bioengineering,Nature Communications,10.1038/s41467-025-68247-6,2026-01-09,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.06.652311_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.05.07.652636_v1,10.1101/2025.05.07.652636,A Compact Base Editor Rescues AATD-associated Liver and Lung Disease in Mouse Models,v1,2025-05-07,Bioengineering,Molecular Therapy,10.1016/j.ymthe.2025.08.040,2025-11,95,4.008,9.40,extracted_data/May_2025/10.1101_2025.05.07.652636_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.05.14.653916_v2,10.1101/2025.05.14.653916,Megabase-scale human genome rearrangement with programmable bridge recombinases,v2,2025-05-14,Bioengineering,Science,10.1126/science.adz0276,2026-03-12,19,10.416,15.26,extracted_data/May_2025/10.1101_2025.05.14.653916_v2.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.05.17.654660_v1,10.1101/2025.05.17.654660,Magnetically Responsive Nanocultures for Direct Microbial Assessment in Soil Environments,v1,2025-05-17,Bioengineering,Science Advances,10.1126/sciadv.ady2654,2025-11-21,79,4.324,12.06,extracted_data/May_2025/10.1101_2025.05.17.654660_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.06.04.657858_v1,10.1101/2025.06.04.657858,VesicleVoyager: In vivo selection of surface displayed proteins that direct extracellular vesicles to tissue-specific targets,v1,2025-06-04,Bioengineering,Journal of Extracellular Vesicles,10.1002/jev2.70184,2025-11,75,4.524,13.60,extracted_data/June_2025/10.1101_2025.06.04.657858_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.06.10.658938_v1,10.1101/2025.06.10.658938,MemPPI platform for measuring and engineering membrane protein-protein interactions in mammalian cells via split nanoluciferase,v1,2025-06-10,Bioengineering,Protein Science,10.1002/pro.70496,2026-03,73,4.657,6.35,extracted_data/June_2025/10.1101_2025.06.10.658938_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.06.11.659141_v1,10.1101/2025.06.11.659141,Sono-uncaging for Spatiotemporal Control of Chemical Reactivity,v1,2025-06-11,Bioengineering,Journal of the American Chemical Society,10.1021/jacs.5c09181,2025-10-01,55,5.554,15.01,extracted_data/June_2025/10.1101_2025.06.11.659141_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.06.26.661443_v2,10.1101/2025.06.26.661443,In Vivo Calcium Imaging in the Near-Infrared II Window,v2,2025-06-26,Bioengineering,Journal of the American Chemical Society,10.1021/jacs.5c13641,2026-01-14,55,5.554,15.01,extracted_data/November_2025/10.1101_2025.06.26.661443_v2.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.07.11.664375_v2,10.1101/2025.07.11.664375,Enzyme-responsive Hemostatic Elastin-like Polypeptides for Fibrin Stabilization and Coagulation Restoration in Thrombocytopenia,v2,2025-07-11,Bioengineering,Journal of the American Chemical Society,10.1021/jacs.5c18009,2026-02-11,55,5.554,15.01,extracted_data/December_2025/10.1101_2025.07.11.664375_v2.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.07.14.664679_v1,10.1101/2025.07.14.664679,Dual-Mode Microfluidic Immunostaining (Dumi) Device for Diagnostic Biomarkers Detection and Tumor Microenvironment Evaluation,v1,2025-07-14,Bioengineering,Science Advances,10.1126/sciadv.aea2586,2026-01-16,79,4.324,12.06,extracted_data/July_2025/10.1101_2025.07.14.664679_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.07.19.665678_v2,10.1101/2025.07.19.665678,FLEXTAG: A Small and Self-renewable Protein Labeling System for Anti-fading Multi-color Super-resolution Imaging,v2,2025-07-19,Bioengineering,Nature Communications,10.1038/s41467-026-69658-9,2026-03-09,71,4.761,14.63,extracted_data/December_2025/10.1101_2025.07.19.665678_v2.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.08.04.668447_v1,10.1101/2025.08.04.668447,Nanopore-Based Glycan Sequencing via Fragmentation-Reassembly Strategy,v1,2025-08-04,Bioengineering,Journal of the American Chemical Society,10.1021/jacs.5c22760,2026-04-08,55,5.554,15.01,extracted_data/August_2025/10.1101_2025.08.04.668447_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.09.07.674790_v1,10.1101/2025.09.07.674790,A programmable genetic platform for engineering noninvasive biosensors,v1,2025-09-07,Bioengineering,Science Advances,10.1126/sciadv.aec1211,2026-01-16,79,4.324,12.06,extracted_data/September_2025/10.1101_2025.09.07.674790_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.10.13.682215_v1,10.1101/2025.10.13.682215,Biosynthesis of minimal C-phycocyanin chromophore assemblies in E. coli provides a platform to dissect protein-mediated tuning of exciton transfer,v1,2025-10-13,Bioengineering,Journal of the American Chemical Society,10.1021/jacs.5c18051,2026-01-28,55,5.554,15.01,extracted_data/October_2025/10.1101_2025.10.13.682215_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.10.16.682055_v1,10.1101/2025.10.16.682055,"Scaffold-mediated miRNA-155 inhibition promotes regenerative macrophage polarisation leading to anti-inflammatory, angiogenic and neurogenic responses for wound healing",v1,2025-10-16,Bioengineering,Bioactive Materials,10.1016/j.bioactmat.2026.02.004,2026-07,90,4.075,20.82,extracted_data/October_2025/10.1101_2025.10.16.682055_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.10.21.683755_v1,10.1101/2025.10.21.683755,M1 Macrophage-Derived Small Extracellular Vesicles as Synergistic Nanotherapeutics: Harnessing Intrinsic Anticancer Activity and Drug Delivery Capacity,v1,2025-10-21,Bioengineering,Journal of Extracellular Vesicles,10.1002/jev2.70242,2026-02,75,4.524,13.60,extracted_data/October_2025/10.1101_2025.10.21.683755_v1.xml,top100_bgm_multi_journals.csv
bioengineering,10.1101_2025.10.28.685030_v1,10.1101/2025.10.28.685030,A bioengineered human urothelial organoid model reveals the urine-urothelium interplay in tissue resilience and UPEC recurrence in urinary tract infections,v1,2025-10-28,Bioengineering,Nature Communications,10.1038/s41467-026-68573-3,2026-02-03,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.10.28.685030_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.01.616142_v1,10.1101/2024.10.01.616142,scMODAL: A general deep learning framework for comprehensive single-cell multi-omics data alignment with feature links,v1,2024-10-01,Bioinformatics,Nature Communications,10.1038/s41467-025-60333-z,2025-05-29,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.01.616142_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.02.616292_v2,10.1101/2024.10.02.616292,De novo discovery of conserved gene clusters in microbial genomes with Spacedust,v2,2024-10-02,Bioinformatics,Nature Methods,10.1038/s41592-025-02816-x,2025-10,8,17.251,13.51,extracted_data/May_2025/10.1101_2024.10.02.616292_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.02.616334_v2,10.1101/2024.10.02.616334,Reference-free variant calling with local graph construction with ska lo (SKA),v2,2024-10-02,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msaf077,2025-04-01,89,4.085,5.04,extracted_data/February_2025/10.1101_2024.10.02.616334_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.02.616391_v1,10.1101/2024.10.02.616391,CREATE: cell-type-specific cis-regulatory elements identification via discrete embedding,v1,2024-10-02,Bioinformatics,Nature Communications,10.1038/s41467-025-59780-5,2025-05-17,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.02.616391_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.03.616401_v2,10.1101/2024.10.03.616401,LIET Model: Capturing the kinetics of RNA polymerase from loading to termination,v2,2024-10-03,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf246,2025-04-10,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.10.03.616401_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.04.616752_v2,10.1101/2024.10.04.616752,Microbiome Data Integration via Shared Dictionary Learning,v2,2024-10-04,Bioinformatics,Nature Communications,10.1038/s41467-025-63425-y,2025-09-01,71,4.761,14.63,extracted_data/June_2025/10.1101_2024.10.04.616752_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.07.617016_v2,10.1101/2024.10.07.617016,Data-driven evaluation of suitable immunogens for improved antibody selection,v2,2024-10-07,Bioinformatics,Protein Science,10.1002/pro.70100,2025-04,73,4.657,6.35,extracted_data/October_2024/10.1101_2024.10.07.617016_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.07.617088_v2,10.1101/2024.10.07.617088,Vispro improves imaging analysis for Visium spatial transcriptomics,v2,2024-10-07,Bioinformatics,Genome Biology,10.1186/s13059-025-03648-w,2025-06-18,53,5.710,9.04,extracted_data/November_2024/10.1101_2024.10.07.617088_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.07.617101_v2,10.1101/2024.10.07.617101,"Apollo: A comprehensive GPU-powered within-host simulator for viral evolution and infection dynamics across population, tissue, and cell",v2,2024-10-07,Bioinformatics,Nature Communications,10.1038/s41467-025-60988-8,2025-07-01,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.07.617101_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.10.617571_v1,10.1101/2024.10.10.617571,Structural and evolutionary determinants of Argonaute function,v1,2024-10-10,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf962,2025-09-23,34,7.776,16.90,extracted_data/October_2024/10.1101_2024.10.10.617571_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.11.617736_v1,10.1101/2024.10.11.617736,Multimodal integration of single cell ATAC-seq data enables highly accurate delineation of clinically relevant tumor cell subpopulations,v1,2024-10-11,Bioinformatics,Genome Medicine,10.1186/s13073-026-01599-w,2026-01-13,64,5.078,10.74,extracted_data/October_2024/10.1101_2024.10.11.617736_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.11.617799_v1,10.1101/2024.10.11.617799,Cell tracking with accurate error prediction,v1,2024-10-11,Bioinformatics,Nature Methods,10.1038/s41592-025-02845-6,2025-11,8,17.251,13.51,extracted_data/October_2024/10.1101_2024.10.11.617799_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.12.618041_v1,10.1101/2024.10.12.618041,MSFragger-DDA+ Enhances Peptide Identification Sensitivity with Full Isolation Window Search,v1,2024-10-12,Bioinformatics,Nature Communications,10.1038/s41467-025-58728-z,2025-04-08,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.12.618041_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.14.618243_v1,10.1101/2024.10.14.618243,Negativeome in Early-Life Virome Studies: Characterization and Decontamination,v1,2024-10-14,Bioinformatics,Nature Communications,10.1038/s41467-025-61478-7,2025-07-04,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.14.618243_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.15.618384_v1,10.1101/2024.10.15.618384,DEMINERS enables clinical metagenomics and comparative transcriptomic analysis by increasing throughput and accuracy of nanopore direct RNA sequencing,v1,2024-10-15,Bioinformatics,Genome Biology,10.1186/s13059-025-03536-3,2025-03-28,53,5.710,9.04,extracted_data/October_2024/10.1101_2024.10.15.618384_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.15.618504_v2,10.1101/2024.10.15.618504,Carafe enables high quality in silico spectral library generation for data-independent acquisition proteomics,v2,2024-10-15,Bioinformatics,Nature Communications,10.1038/s41467-025-64928-4,2025-11-06,71,4.761,14.63,extracted_data/August_2025/10.1101_2024.10.15.618504_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.17.618896_v2,10.1101/2024.10.17.618896,In silico generation of synthetic cancer genomes using generative AI,v2,2024-10-17,Bioinformatics,Cell Genomics,10.1016/j.xgen.2025.100969,2025-11,46,6.238,7.85,extracted_data/February_2025/10.1101_2024.10.17.618896_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.18.617420_v1,10.1101/2024.10.18.617420,Global comparative structural analysis of responses to protein phosphorylation,v1,2024-10-18,Bioinformatics,Nature Communications,10.1038/s41467-025-64116-4,2025-10-24,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.18.617420_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.21.619495_v2,10.1101/2024.10.21.619495,Integrated transcriptomic landscape of medulloblastoma and ependymoma reveals novel tumor subtype-specific biology,v2,2024-10-21,Bioinformatics,Neuro-Oncology,10.1093/neuonc/noaf251,2026-02-01,39,6.974,8.79,extracted_data/June_2025/10.1101_2024.10.21.619495_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.22.619642_v1,10.1101/2024.10.22.619642,K-mer analysis of long-read alignment pileups for structural variant genotyping,v1,2024-10-22,Bioinformatics,Nature Communications,10.1038/s41467-025-58577-w,2025-04-04,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.22.619642_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.23.619857_v1,10.1101/2024.10.23.619857,Oatk: a de novo assembly tool for complex plant organelle genomes,v1,2024-10-23,Bioinformatics,Genome Biology,10.1186/s13059-025-03676-6,2025-08-07,53,5.710,9.04,extracted_data/October_2024/10.1101_2024.10.23.619857_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.29.620855_v3,10.1101/2024.10.29.620855,Multi-context seeds enable fast and high-accuracy read mapping,v3,2024-10-29,Bioinformatics,Genome Biology,10.1186/s13059-026-04017-x,2026-02-28,53,5.710,9.04,extracted_data/December_2025/10.1101_2024.10.29.620855_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.30.621093_v2,10.1101/2024.10.30.621093,mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis,v2,2024-10-30,Bioinformatics,Nature Communications,10.1038/s41467-025-63626-5,2025-09-29,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.10.30.621093_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.10.31.619327_v1,10.1101/2024.10.31.619327,Exploring phenotype-related single-cells through attention-enhanced representation learning,v1,2024-10-31,Bioinformatics,Genome Medicine,10.1186/s13073-026-01598-x,2026-01-21,64,5.078,10.74,extracted_data/November_2024/10.1101_2024.10.31.619327_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.01.621447_v1,10.1101/2024.11.01.621447,Evaluation of T Cell Receptor Construction Methods from scRNA-Seq Data,v1,2024-11-01,Bioinformatics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzae086,2025-01-15,98,3.964,7.21,extracted_data/November_2024/10.1101_2024.11.01.621447_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.03.621746_v1,10.1101/2024.11.03.621746,Learning interpretable representations of single-cell multi-omics data with multi-output Gaussian Processes,v1,2024-11-03,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf630,2025-07-19,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.03.621746_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.04.621604_v1,10.1101/2024.11.04.621604,A comprehensive foundation model for cryo-EM image processing,v1,2024-11-04,Bioinformatics,Nature Methods,10.1038/s41592-025-02916-8,2026-01,8,17.251,13.51,extracted_data/November_2024/10.1101_2024.11.04.621604_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.05.622044_v1,10.1101/2024.11.05.622044,PDBe tools for an in-depth analysis of small molecules in the Protein Data Bank,v1,2024-11-05,Bioinformatics,Protein Science,10.1002/pro.70084,2025-04,73,4.657,6.35,extracted_data/November_2024/10.1101_2024.11.05.622044_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.06.622261_v1,10.1101/2024.11.06.622261,Benchmarking of T-Cell Receptor - Epitope Predictors with ePytope-TCR,v1,2024-11-06,Bioinformatics,Cell Genomics,10.1016/j.xgen.2025.100946,2025-08,46,6.238,7.85,extracted_data/November_2024/10.1101_2024.11.06.622261_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.07.622422_v2,10.1101/2024.11.07.622422,FlowDesign: Improved Design of Antibody CDRs Through Flow Matching and Better Prior Distributions,v2,2024-11-07,Bioinformatics,Cell Systems,10.1016/j.cels.2025.101270,2025-06,65,4.943,5.72,extracted_data/January_2025/10.1101_2024.11.07.622422_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.07.622443_v1,10.1101/2024.11.07.622443,Biological age prediction using a novel DNN model based on steroid metabolic pathways,v1,2024-11-07,Bioinformatics,Science Advances,10.1126/sciadv.adt2624,2025-03-14,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.07.622443_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.08.621836_v2,10.1101/2024.11.08.621836,Tidyplots empowers life scientists with easy code-based data visualization,v2,2024-11-08,Bioinformatics,iMeta,10.1002/imt2.70018,2025-04,47,6.223,22.73,extracted_data/November_2024/10.1101_2024.11.08.621836_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.08.622633_v1,10.1101/2024.11.08.622633,A robust workflow to benchmark deconvolution of multi-omic data,v1,2024-11-08,Bioinformatics,Genome Biology,10.1186/s13059-025-03897-9,2025-12-17,53,5.710,9.04,extracted_data/November_2024/10.1101_2024.11.08.622633_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.08.622745_v2,10.1101/2024.11.08.622745,CelLink: integrating single-cell multi-omics data with weak feature linkage and imbalanced cell populations,v2,2024-11-08,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1270,2025-11-26,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.08.622745_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.09.622759_v2,10.1101/2024.11.09.622759,scLong: A Billion-Parameter Foundation Model for Capturing Long-Range Gene Context in Single-Cell Transcriptomics,v2,2024-11-09,Bioinformatics,Nature Communications,10.1038/s41467-026-69102-y,2026-02-05,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.09.622759_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.09.622782_v1,10.1101/2024.11.09.622782,CircAge: A Comprehensive Resource for Aging-Associated Circular RNAs Across Species and Tissues,v1,2024-11-09,Bioinformatics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf044,2025-07-11,98,3.964,7.21,extracted_data/November_2024/10.1101_2024.11.09.622782_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.10.622844_v1,10.1101/2024.11.10.622844,Assessing Conformation Validity and Rationality of Deep Learning-Generated 3D Molecules,v1,2024-11-10,Bioinformatics,Nature Communications,10.1038/s41467-026-69303-5,2026-02-07,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.10.622844_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.12.623316_v1,10.1101/2024.11.12.623316,scTrace+: enhance the cell fate inference by integrating the lineage-tracing and multi-faceted transcriptomic similarity information,v1,2024-11-12,Bioinformatics,Cell Systems,10.1016/j.cels.2025.101398,2025-09,65,4.943,5.72,extracted_data/November_2024/10.1101_2024.11.12.623316_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.13.623350_v6,10.1101/2024.11.13.623350,GPU-accelerated homology search with MMseqs2,v6,2024-11-13,Bioinformatics,Nature Methods,10.1038/s41592-025-02819-8,2025-10,8,17.251,13.51,extracted_data/May_2025/10.1101_2024.11.13.623350_v6.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.13.623527_v1,10.1101/2024.11.13.623527,Exploring large protein sequence space through homology- and representation-based hierarchical clustering,v1,2024-11-13,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msaf136,2025-06-04,89,4.085,5.04,extracted_data/November_2024/10.1101_2024.11.13.623527_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.14.623548_v3,10.1101/2024.11.14.623548,Deciphering the 3D genome organization across species from Hi-C data,v3,2024-11-14,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1516,2026-01-14,34,7.776,16.90,extracted_data/October_2025/10.1101_2024.11.14.623548_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.14.623630_v2,10.1101/2024.11.14.623630,InterPLM: Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders,v2,2024-11-14,Bioinformatics,Nature Methods,10.1038/s41592-025-02836-7,2025-10,8,17.251,13.51,extracted_data/January_2025/10.1101_2024.11.14.623630_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.16.623974_v2,10.1101/2024.11.16.623974,Squidiff: Predicting cellular development and responses to perturbations using a diffusion model,v2,2024-11-16,Bioinformatics,Nature Methods,10.1038/s41592-025-02877-y,2026-01,8,17.251,13.51,extracted_data/August_2025/10.1101_2024.11.16.623974_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.17.623994_v1,10.1101/2024.11.17.623994,"Plasmids, Prophages and Defense Systems are Depleted from Plant Microbiota Genomes",v1,2024-11-17,Bioinformatics,Genome Biology,10.1186/s13059-025-03641-3,2025-06-11,53,5.710,9.04,extracted_data/November_2024/10.1101_2024.11.17.623994_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.17.624050_v2,10.1101/2024.11.17.624050,Clair3-RNA: A deep learning-based small variant caller for long-read RNA sequencing data,v2,2024-11-17,Bioinformatics,Nature Communications,10.1038/s41467-025-67237-y,2025-12-22,71,4.761,14.63,extracted_data/January_2025/10.1101_2024.11.17.624050_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.23.624993_v1,10.1101/2024.11.23.624993,Recommendations for Bioinformatics in Clinical Practice,v1,2024-11-23,Bioinformatics,Genome Medicine,10.1186/s13073-025-01543-4,2025-10-17,64,5.078,10.74,extracted_data/November_2024/10.1101_2024.11.23.624993_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.25.625316_v3,10.1101/2024.11.25.625316,FIDDLE: a deep learning method for chemical formulas prediction from tandem mass spectra,v3,2024-11-25,Bioinformatics,Nature Communications,10.1038/s41467-025-66060-9,2025-12-12,71,4.761,14.63,extracted_data/August_2025/10.1101_2024.11.25.625316_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.26.625381_v2,10.1101/2024.11.26.625381,Bayesian phylodynamic inference of multi-type population trajectories using genomic data,v2,2024-11-26,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msaf130,2025-06-04,89,4.085,5.04,extracted_data/April_2025/10.1101_2024.11.26.625381_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.27.625781_v1,10.1101/2024.11.27.625781,Cell-type specific subtyping of epigenomes improves prognostic stratification of cancer,v1,2024-11-27,Bioinformatics,Genome Medicine,10.1186/s13073-025-01453-5,2025-04-03,64,5.078,10.74,extracted_data/December_2024/10.1101_2024.11.27.625781_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.11.28.625845_v2,10.1101/2024.11.28.625845,On metrics for subpopulation detection in single-cell and spatial omics data,v2,2024-11-28,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf921,2025-09-23,34,7.776,16.90,extracted_data/July_2025/10.1101_2024.11.28.625845_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.02.624527_v1,10.1101/2024.12.02.624527,Morphological map of under- and over-expression of genes in human cells,v1,2024-12-02,Bioinformatics,Nature Methods,10.1038/s41592-025-02753-9,2025-08,8,17.251,13.51,extracted_data/January_2025/10.1101_2024.12.02.624527_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.03.626638_v4,10.1101/2024.12.03.626638,GraphVelo allows for accurate inference of multimodal velocities and molecular mechanisms for single cells,v4,2024-12-03,Bioinformatics,Nature Communications,10.1038/s41467-025-62784-w,2025-08-22,71,4.761,14.63,extracted_data/June_2025/10.1101_2024.12.03.626638_v4.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.04.626832_v1,10.1101/2024.12.04.626832,Integration of diverse bioactivity data into the Chemical Checker compound universe,v1,2024-12-04,Bioinformatics,Nature Protocols,10.1038/s41596-025-01167-3,2025-11,50,5.854,16.55,extracted_data/December_2024/10.1101_2024.12.04.626832_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.06.627127_v1,10.1101/2024.12.06.627127,Bridging the Dimensional Gap from Planar Spatial Transcriptomics to 3D Cell Atlases,v1,2024-12-06,Bioinformatics,Nature Methods,10.1038/s41592-025-02969-9,2026-02,8,17.251,13.51,extracted_data/December_2024/10.1101_2024.12.06.627127_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.07.627329_v1,10.1101/2024.12.07.627329,scPDA: Denoising Protein Expression in Droplet-Based Single-Cell Data,v1,2024-12-07,Bioinformatics,Genome Biology,10.1186/s13059-025-03686-4,2025-07-17,53,5.710,9.04,extracted_data/December_2024/10.1101_2024.12.07.627329_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.09.627450_v1,10.1101/2024.12.09.627450,Benchmarking deep learning methods for biologically conserved single-cell integration,v1,2024-12-09,Bioinformatics,Genome Biology,10.1186/s13059-025-03869-z,2025-11-20,53,5.710,9.04,extracted_data/December_2024/10.1101_2024.12.09.627450_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.10.627786_v3,10.1101/2024.12.10.627786,Deciphering enzymatic potential in metagenomic reads through DNA language models,v3,2024-12-10,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf836,2025-08-27,34,7.776,16.90,extracted_data/June_2025/10.1101_2024.12.10.627786_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.11.627883_v1,10.1101/2024.12.11.627883,PlateletBase: A Comprehensive Knowledgebase for Platelet Research and Disease Insights,v1,2024-12-11,Bioinformatics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf031,2025-05-30,98,3.964,7.21,extracted_data/December_2024/10.1101_2024.12.11.627883_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.11.628077_v1,10.1101/2024.12.11.628077,Causal disentanglement for single-cell representations and controllable counterfactual generation,v1,2024-12-11,Bioinformatics,Nature Communications,10.1038/s41467-025-62008-1,2025-07-23,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.11.628077_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.13.628390_v1,10.1101/2024.12.13.628390,"Comparison of imaging-based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed, paraffin-embedded tumor samples",v1,2024-12-13,Bioinformatics,Nature Communications,10.1038/s41467-025-63414-1,2025-09-26,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.13.628390_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.17.628809_v2,10.1101/2024.12.17.628809,All-at-once RNA folding with 3D motif prediction framed by evolutionary information,v2,2024-12-17,Bioinformatics,Nature Methods,10.1038/s41592-025-02833-w,2025-10,8,17.251,13.51,extracted_data/April_2025/10.1101_2024.12.17.628809_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.17.628825_v1,10.1101/2024.12.17.628825,HAIRpred: Prediction of human antibody interacting residues in an antigen from its primary structure,v1,2024-12-17,Bioinformatics,Protein Science,10.1002/pro.70212,2025-08,73,4.657,6.35,extracted_data/January_2025/10.1101_2024.12.17.628825_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.18.629037_v2,10.1101/2024.12.18.629037,Learning the Language of Phylogeny with MSA Transformer,v2,2024-12-18,Bioinformatics,Cell Systems,10.1016/j.cels.2025.101445,2026-01,65,4.943,5.72,extracted_data/October_2025/10.1101_2024.12.18.629037_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.18.629083_v1,10.1101/2024.12.18.629083,Benchmarking scRNA-seq copy number variation callers,v1,2024-12-18,Bioinformatics,Nature Communications,10.1038/s41467-025-62359-9,2025-10-02,71,4.761,14.63,extracted_data/January_2025/10.1101_2024.12.18.629083_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.18.629228_v2,10.1101/2024.12.18.629228,Linkage-based ortholog refinement in bacterial pangenomes with CLARC,v2,2024-12-18,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf488,2025-06-20,34,7.776,16.90,extracted_data/January_2025/10.1101_2024.12.18.629228_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.19.629373_v7,10.1101/2024.12.19.629373,"Disobind: a sequence-based, partner-dependent contact map and interface residue predictor for intrinsically disordered regions",v7,2024-12-19,Bioinformatics,Cell Systems,10.1016/j.cels.2025.101486,2026-01,65,4.943,5.72,extracted_data/December_2025/10.1101_2024.12.19.629373_v7.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.19.629384_v1,10.1101/2024.12.19.629384,TrimNN: Characterizing cellular community motifs for studying multicellular topological organization in complex tissues,v1,2024-12-19,Bioinformatics,Nature Communications,10.1038/s41467-025-63141-7,2025-08-19,71,4.761,14.63,extracted_data/January_2025/10.1101_2024.12.19.629384_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.20.629566_v1,10.1101/2024.12.20.629566,A Co-essentiality Network of Cancer Driver Genes Better Prioritizes Anticancer Drugs,v1,2024-12-20,Bioinformatics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf070,2025-09-26,98,3.964,7.21,extracted_data/January_2025/10.1101_2024.12.20.629566_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.21.629746_v1,10.1101/2024.12.21.629746,"Cancer Histone Mutations Impact Binding and DNA Repair Processes, Leading to Increased Mutagenesis",v1,2024-12-21,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf899,2025-09-05,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.21.629746_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.21.629909_v1,10.1101/2024.12.21.629909,Genetic ancestry and population structure in the All of Us Research Program cohort,v1,2024-12-21,Bioinformatics,Nature Communications,10.1038/s41467-025-59351-8,2025-05-03,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.21.629909_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.24.630258_v1,10.1101/2024.12.24.630258,CorrAdjust unveils biologically relevant transcriptomic correlations by efficiently eliminating hidden confounders,v1,2024-12-24,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf444,2025-05-22,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.24.630258_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.30.630839_v1,10.1101/2024.12.30.630839,Boosting the detection of enhancer-promoter loops via novel normalization methods for chromatin interaction data,v1,2024-12-30,Bioinformatics,Nature Communications,10.1038/s41467-026-69082-z,2026-02-03,71,4.761,14.63,extracted_data/January_2025/10.1101_2024.12.30.630839_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2024.12.31.630607_v1,10.1101/2024.12.31.630607,Empathi: Embedding-based Phage Protein Annotation Tool by Hierarchical Assignment,v1,2024-12-31,Bioinformatics,Nature Communications,10.1038/s41467-025-64177-5,2025-10-14,71,4.761,14.63,extracted_data/January_2025/10.1101_2024.12.31.630607_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.02.631135_v1,10.1101/2025.01.02.631135,Impact of Segmentation Errors in Analysis of Spatial Transcriptomics Data,v1,2025-01-02,Bioinformatics,Nature Genetics,10.1038/s41588-025-02497-4,2026-02,9,16.586,16.08,extracted_data/January_2025/10.1101_2025.01.02.631135_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.04.631307_v1,10.1101/2025.01.04.631307,ModiDeC: a multi-RNA modification classifier for direct nanopore sequencing,v1,2025-01-04,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf673,2025-07-19,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.04.631307_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.05.631388_v1,10.1101/2025.01.05.631388,Mumemto: efficient maximal matching across pangenomes,v1,2025-01-05,Bioinformatics,Genome Biology,10.1186/s13059-025-03644-0,2025-06-17,53,5.710,9.04,extracted_data/January_2025/10.1101_2025.01.05.631388_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.05.631419_v2,10.1101/2025.01.05.631419,DeepSpaceDB: a spatial transcriptomics atlas for interactive in-depth analysis of tissues and tissue microenvironments,v2,2025-01-05,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1117,2026-01-06,34,7.776,16.90,extracted_data/February_2025/10.1101_2025.01.05.631419_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.06.631595_v1,10.1101/2025.01.06.631595,DNALongBench: A Benchmark Suite for Long-Range DNA Prediction Tasks,v1,2025-01-06,Bioinformatics,Nature Communications,10.1038/s41467-025-65077-4,2025-11-18,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.06.631595_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.07.631013_v1,10.1101/2025.01.07.631013,"The mutation rate of SARS-CoV-2 is highly variable between sites and is influenced by sequence context, genomic region, and RNA structure",v1,2025-01-07,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf503,2025-06-06,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.07.631013_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.07.631840_v1,10.1101/2025.01.07.631840,Merging conformational landscapes in a single consensus space with FlexConsensus algorithm,v1,2025-01-07,Bioinformatics,Nature Methods,10.1038/s41592-025-02841-w,2025-10,8,17.251,13.51,extracted_data/January_2025/10.1101_2025.01.07.631840_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.08.631859_v1,10.1101/2025.01.08.631859,High-precision cell-type mapping and annotation of single-cell spatial transcriptomics with STAMapper,v1,2025-01-08,Bioinformatics,Genome Biology,10.1186/s13059-025-03773-6,2025-10-07,53,5.710,9.04,extracted_data/January_2025/10.1101_2025.01.08.631859_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.10.632490_v1,10.1101/2025.01.10.632490,CellUntangler: separating distinct biological signals in single-cell data with deep generative models,v1,2025-01-10,Bioinformatics,Cell Genomics,10.1016/j.xgen.2025.101073,2026-02,46,6.238,7.85,extracted_data/January_2025/10.1101_2025.01.10.632490_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.13.632601_v2,10.1101/2025.01.13.632601,"2D, or not 2D? Investigating Vertical Signal Integrity of Tissue Slices",v2,2025-01-13,Bioinformatics,Nature Biotechnology,10.1038/s41587-026-03004-8,2026-02-10,5,19.006,14.83,extracted_data/August_2025/10.1101_2025.01.13.632601_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.13.632874_v1,10.1101/2025.01.13.632874,Triple-effect correction for Cell Painting data with contrastive and domain-adversarial learning,v1,2025-01-13,Bioinformatics,Nature Communications,10.1038/s41467-025-62193-z,2025-07-25,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.13.632874_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.13.632887_v1,10.1101/2025.01.13.632887,EPSD 2.0: An Updated Database of Protein Phosphorylation Sites across Eukaryotic Species,v1,2025-01-13,Bioinformatics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf057,2025-07-11,98,3.964,7.21,extracted_data/January_2025/10.1101_2025.01.13.632887_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.15.633112_v1,10.1101/2025.01.15.633112,Systematic assessment of microenvironment-dependent transcriptional patterns and intercellular communication,v1,2025-01-15,Bioinformatics,Genome Biology,10.1186/s13059-025-03677-5,2025-07-06,53,5.710,9.04,extracted_data/January_2025/10.1101_2025.01.15.633112_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.16.633332_v2,10.1101/2025.01.16.633332,An adversarial scheme for integrating multi-modal data on protein function,v2,2025-01-16,Bioinformatics,Cell Systems,10.1016/j.cels.2025.101444,2025-11,65,4.943,5.72,extracted_data/January_2025/10.1101_2025.01.16.633332_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.17.633662_v1,10.1101/2025.01.17.633662,A phylogenetic method identifies candidate drivers of the evolution of the SARS-CoV-2 mutation spectrum,v1,2025-01-17,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msaf059,2025-04-01,89,4.085,5.04,extracted_data/January_2025/10.1101_2025.01.17.633662_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.20.633730_v2,10.1101/2025.01.20.633730,A k-mer-based maximum likelihood method for estimating distances of reads to genomes enables genome-wide phylogenetic placement,v2,2025-01-20,Bioinformatics,Genome Biology,10.1186/s13059-026-03999-y,2026-02-21,53,5.710,9.04,extracted_data/July_2025/10.1101_2025.01.20.633730_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.21.634098_v1,10.1101/2025.01.21.634098,Metrics Matter: Why We Need to Stop Using Silhouette in Single-Cell Benchmarking,v1,2025-01-21,Bioinformatics,Nature Biotechnology,10.1038/s41587-025-02743-4,2025-07-30,5,19.006,14.83,extracted_data/January_2025/10.1101_2025.01.21.634098_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.24.634734_v3,10.1101/2025.01.24.634734,SVCROWS: A User-Defined Tool for Interpreting Significant Structural Variants in Heterogeneous Datasets,v3,2025-01-24,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1440,2026-01-05,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.01.24.634734_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.24.634756_v1,10.1101/2025.01.24.634756,SpaIM: Single-cell Spatial Transcriptomics Imputation via Style Transfer,v1,2025-01-24,Bioinformatics,Nature Communications,10.1038/s41467-025-63185-9,2025-08-23,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.24.634756_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.25.634864_v1,10.1101/2025.01.25.634864,"Multi-species integration, alignment and annotation of single-cell RNA-seq data with CAMEX",v1,2025-01-25,Bioinformatics,Nature Communications,10.1038/s41467-026-69696-3,2026-02-21,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.25.634864_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.27.635115_v1,10.1101/2025.01.27.635115,"FastCCC: A permutation-free framework for scalable, robust, and reference-based cell-cell communication analysis in single cell transcriptomics studies",v1,2025-01-27,Bioinformatics,Nature Communications,10.1038/s41467-025-66272-z,2025-12-13,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.27.635115_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.01.31.635838_v1,10.1101/2025.01.31.635838,A Fast Approach for Structural and Evolutionary Analysis Based on Energetic Profile Protein Comparison,v1,2025-01-31,Bioinformatics,Nature Communications,10.1038/s41467-025-57374-9,2025-03-06,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.01.31.635838_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.02.636136_v1,10.1101/2025.02.02.636136,scCausalVI disentangles single-cell perturbation responses with causality-aware generative model,v1,2025-02-02,Bioinformatics,Cell Systems,10.1016/j.cels.2025.101443,2025-11,65,4.943,5.72,extracted_data/February_2025/10.1101_2025.02.02.636136_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.02.636167_v1,10.1101/2025.02.02.636167,Unified high-resolution immune cell fraction estimation in blood tissue from birth to old age,v1,2025-02-02,Bioinformatics,Genome Medicine,10.1186/s13073-025-01489-7,2025-05-27,64,5.078,10.74,extracted_data/February_2025/10.1101_2025.02.02.636167_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.05.636567_v1,10.1101/2025.02.05.636567,Human gut microbiota subspecies carry implicit information for in-depth microbiome research,v1,2025-02-05,Bioinformatics,Cell Host & Microbe,10.1016/j.chom.2025.07.015,2025-08,38,7.067,11.68,extracted_data/February_2025/10.1101_2025.02.05.636567_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.07.637023_v1,10.1101/2025.02.07.637023,Coralysis enables sensitive identification of imbalanced cell types and states in single-cell data via multi-level integration,v1,2025-02-07,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1128,2025-11-13,34,7.776,16.90,extracted_data/February_2025/10.1101_2025.02.07.637023_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.10.637420_v2,10.1101/2025.02.10.637420,Protein folding stability estimation with explicit consideration of unfolded states,v2,2025-02-10,Bioinformatics,Nature Communications,10.1038/s41467-026-68637-4,2026-01-21,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.02.10.637420_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.11.637677_v1,10.1101/2025.02.11.637677,ImmunoMatch learns and predicts cognate pairing of heavy and light immunoglobulin chains,v1,2025-02-11,Bioinformatics,Nature Methods,10.1038/s41592-025-02913-x,2026-01,8,17.251,13.51,extracted_data/February_2025/10.1101_2025.02.11.637677_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.13.638154_v2,10.1101/2025.02.13.638154,Generalizable and scalable protein stability prediction with rewired protein generative models,v2,2025-02-13,Bioinformatics,Nature Communications,10.1038/s41467-025-67609-4,2025-12-20,71,4.761,14.63,extracted_data/November_2025/10.1101_2025.02.13.638154_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.15.638400_v1,10.1101/2025.02.15.638400,CellScope: High-Performance Cell Atlas Workflow with Tree-Structured Representation,v1,2025-02-15,Bioinformatics,Nature Communications,10.1038/s41467-025-67890-3,2025-12-30,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.15.638400_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.16.638482_v1,10.1101/2025.02.16.638482,Comprehensive benchmarking of methods for mutation calling in circulating tumor DNA,v1,2025-02-16,Bioinformatics,Nature Communications,10.1038/s41467-025-67842-x,2025-12-18,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.16.638482_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.20.639228_v1,10.1101/2025.02.20.639228,Cell type-specific epigenetic regulatory circuitry of coronary artery disease loci,v1,2025-02-20,Bioinformatics,Nature Communications,10.1038/s41467-026-70216-6,2026-03-10,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.20.639228_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.22.639693_v1,10.1101/2025.02.22.639693,Estimating gene conversion rates from population data using multi-individual identity by descent,v1,2025-02-22,Bioinformatics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.07.019,2025-09,74,4.531,7.17,extracted_data/February_2025/10.1101_2025.02.22.639693_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.23.639721_v2,10.1101/2025.02.23.639721,High-Parameter Spatial Multi-Omics through Histology-Anchored Integration,v2,2025-02-23,Bioinformatics,Nature Methods,10.1038/s41592-025-02926-6,2026-02,8,17.251,13.51,extracted_data/October_2025/10.1101_2025.02.23.639721_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.24.639848_v2,10.1101/2025.02.24.639848,Pregnancy lab test dynamics resemble rejuvenation of some organs and aging of others,v2,2025-02-24,Bioinformatics,Nature Communications,10.1038/s41467-026-69340-0,2026-02-16,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.02.24.639848_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.24.639861_v1,10.1101/2025.02.24.639861,Targeted genome mining with GATOR-GC maps the evolutionary landscape of biosynthetic diversity,v1,2025-02-24,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf606,2025-07-08,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.02.24.639861_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.26.640259_v1,10.1101/2025.02.26.640259,Highly accurate prophage island detection with PIDE,v1,2025-02-26,Bioinformatics,Genome Biology,10.1186/s13059-025-03733-0,2025-08-20,53,5.710,9.04,extracted_data/March_2025/10.1101_2025.02.26.640259_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.26.640381_v1,10.1101/2025.02.26.640381,Spatially resolved integrative analysis of transcriptomic and metabolomic changes in tissue injury studies,v1,2025-02-26,Bioinformatics,Nature Communications,10.1038/s41467-025-68003-w,2026-01-07,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.02.26.640381_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.02.27.640589_v1,10.1101/2025.02.27.640589,Improved reconstruction of transcripts and coding sequences from RNA-seq data,v1,2025-02-27,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkag091,2026-02-05,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.02.27.640589_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.01.640936_v1,10.1101/2025.03.01.640936,NTxPred2: A large language model for predicting neurotoxic peptides and neurotoxins,v1,2025-03-01,Bioinformatics,Protein Science,10.1002/pro.70200,2025-08,73,4.657,6.35,extracted_data/March_2025/10.1101_2025.03.01.640936_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.03.640993_v1,10.1101/2025.03.03.640993,Proteome-wide computational analyses reveal links between protein condensate formation and RNA biology,v1,2025-03-03,Bioinformatics,Science Advances,10.1126/sciadv.ady1420,2025-12-05,79,4.324,12.06,extracted_data/March_2025/10.1101_2025.03.03.640993_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.03.641259_v3,10.1101/2025.03.03.641259,RNA2seg: a generalist model for cell segmentation in image-based spatial transcriptomics,v3,2025-03-03,Bioinformatics,Genome Biology,10.1186/s13059-025-03908-9,2026-01-30,53,5.710,9.04,extracted_data/March_2025/10.1101_2025.03.03.641259_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.04.641377_v1,10.1101/2025.03.04.641377,DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions,v1,2025-03-04,Bioinformatics,Cell Systems,10.1016/j.cels.2025.101454,2026-01,65,4.943,5.72,extracted_data/March_2025/10.1101_2025.03.04.641377_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.06.641837_v1,10.1101/2025.03.06.641837,Development of a Consensus Molecular Classifier for Pancreatic Ductal Adenocarcinoma,v1,2025-03-06,Bioinformatics,Genome Medicine,10.1186/s13073-025-01568-9,2025-11-14,64,5.078,10.74,extracted_data/March_2025/10.1101_2025.03.06.641837_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.06.641905_v1,10.1101/2025.03.06.641905,spVelo: RNA velocity inference for multi-batch spatial transcriptomics data,v1,2025-03-06,Bioinformatics,Genome Biology,10.1186/s13059-025-03701-8,2025-08-11,53,5.710,9.04,extracted_data/March_2025/10.1101_2025.03.06.641905_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.09.642188_v2,10.1101/2025.03.09.642188,Learning the language of protein-protein interactions,v2,2025-03-09,Bioinformatics,Nature Communications,10.1038/s41467-025-67971-3,2026-01-07,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.09.642188_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.09.642240_v1,10.1101/2025.03.09.642240,Multi-scale classification decodes the complexity of the human E3 ligome,v1,2025-03-09,Bioinformatics,Nature Communications,10.1038/s41467-025-67450-9,2025-12-25,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.09.642240_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.10.642485_v1,10.1101/2025.03.10.642485,GlycoGenius: the ultimate high-throughput glycan composition identification tool,v1,2025-03-10,Bioinformatics,Nature Communications,10.1038/s41467-025-65265-2,2025-11-24,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.10.642485_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.11.642701_v3,10.1101/2025.03.11.642701,RNAhub - an automated pipeline to search and align RNA homologs with secondary structure assessment,v3,2025-03-11,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf342,2025-07-07,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.03.11.642701_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.12.642845_v2,10.1101/2025.03.12.642845,AlphaSync is an enhanced AlphaFold structure database synchronized with UniProt,v2,2025-03-12,Bioinformatics,Nature Structural & Molecular Biology,10.1038/s41594-025-01719-x,2025-12,48,6.187,6.42,extracted_data/April_2025/10.1101_2025.03.12.642845_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.13.643052_v1,10.1101/2025.03.13.643052,Augmenting microbial phylogenomic signal with tailored marker gene sets,v1,2025-03-13,Bioinformatics,Nature Communications,10.1038/s41467-025-64881-2,2025-11-12,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.13.643052_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.13.643146_v3,10.1101/2025.03.13.643146,Revealing a coherent cell state landscape across single cell datasets with CONCORD,v3,2025-03-13,Bioinformatics,Nature Biotechnology,10.1038/s41587-025-02950-z,2026-01-05,5,19.006,14.83,extracted_data/August_2025/10.1101_2025.03.13.643146_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.14.638654_v1,10.1101/2025.03.14.638654,DiCE: differential centrality-ensemble analysis based on gene expression profiles and protein-protein interaction network,v1,2025-03-14,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf609,2025-07-08,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.14.638654_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.14.643293_v2,10.1101/2025.03.14.643293,SegMantX: a novel tool for detecting DNA duplications uncovers prevalent duplications in plasmids,v2,2025-03-14,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msaf242,2025-10-01,89,4.085,5.04,extracted_data/May_2025/10.1101_2025.03.14.643293_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.21.644602_v1,10.1101/2025.03.21.644602,WarpDemuX-tRNA: barcode multiplexing for nanopore tRNA sequencing,v1,2025-03-21,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf873,2025-09-05,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.21.644602_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.26.645390_v1,10.1101/2025.03.26.645390,High-accuracy protein complex structure modeling based on sequence-derived structure complementarity,v1,2025-03-26,Bioinformatics,Nature Communications,10.1038/s41467-025-65090-7,2025-11-19,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.26.645390_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.26.645455_v1,10.1101/2025.03.26.645455,GPerturb: Gaussian process modelling of single-cell perturbation data,v1,2025-03-26,Bioinformatics,Nature Communications,10.1038/s41467-025-61165-7,2025-07-01,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.26.645455_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.30.646164_v1,10.1101/2025.03.30.646164,Deciphering complex interactions between LTR retrotransposons and three Papaver species using LTR_Stream,v1,2025-03-30,Bioinformatics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf061,2025-09-22,98,3.964,7.21,extracted_data/April_2025/10.1101_2025.03.30.646164_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.03.31.646327_v1,10.1101/2025.03.31.646327,Integrating experimental feedback improves generative models for biological sequences,v1,2025-03-31,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf832,2025-08-27,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.03.31.646327_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.01.646578_v1,10.1101/2025.04.01.646578,Benchmarking single-cell multi-modal data integrations,v1,2025-04-01,Bioinformatics,Nature Methods,10.1038/s41592-025-02737-9,2025-11,8,17.251,13.51,extracted_data/April_2025/10.1101_2025.04.01.646578_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.01.646650_v1,10.1101/2025.04.01.646650,SnoBIRD: A tool to identify C/D box snoRNAs and refine their annotation across all eukaryotes,v1,2025-04-01,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf708,2025-07-19,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.04.01.646650_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.02.646792_v2,10.1101/2025.04.02.646792,HyDrop v2: Scalable atlas construction for training sequence-to-function models,v2,2025-04-02,Bioinformatics,Nature Communications,10.1038/s41467-026-68742-4,2026-01-22,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.02.646792_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.03.647034_v1,10.1101/2025.04.03.647034,The South American MicroBiome Archive (saMBA): Enriching the healthy microbiome concept by evaluating uniqueness and biodiversity of neglected populations,v1,2025-04-03,Bioinformatics,Nature Communications,10.1038/s41467-025-62601-4,2025-08-09,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.03.647034_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.07.647596_v3,10.1101/2025.04.07.647596,"A modular, immunopeptidogenomic (iPepGen) analysis pipeline for discovery, verification, and prioritization of cancer peptide neoantigen candidates",v3,2025-04-07,Bioinformatics,Genome Biology,10.1186/s13059-026-04012-2,2026-02-25,53,5.710,9.04,extracted_data/December_2025/10.1101_2025.04.07.647596_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.07.647659_v4,10.1101/2025.04.07.647659,Dividing out quantification uncertainty enables assessment of differential transcript usage with limma and edgeR,v4,2025-04-07,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1305,2025-11-26,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.04.07.647659_v4.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.08.647860_v2,10.1101/2025.04.08.647860,FLASH-MM: fast and scalable single-cell differential expression analysis using linear mixed-effects models,v2,2025-04-08,Bioinformatics,Nature Communications,10.1038/s41467-026-69063-2,2026-02-05,71,4.761,14.63,extracted_data/November_2025/10.1101_2025.04.08.647860_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.11.648460_v1,10.1101/2025.04.11.648460,DSSP 4: FAIR annotation of protein secondary structure,v1,2025-04-11,Bioinformatics,Protein Science,10.1002/pro.70208,2025-08,73,4.657,6.35,extracted_data/April_2025/10.1101_2025.04.11.648460_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.14.648685_v2,10.1101/2025.04.14.648685,Efficient near telomere-to-telomere assembly of Nanopore Simplex reads,v2,2025-04-14,Bioinformatics,Nature,10.1038/s41586-026-10105-6,2026-02-04,7,18.288,18.47,extracted_data/November_2025/10.1101_2025.04.14.648685_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.16.648930_v2,10.1101/2025.04.16.648930,Assessing scoring metrics for AlphaFold2 and AlphaFold3 protein complex predictions,v2,2025-04-16,Bioinformatics,Protein Science,10.1002/pro.70327,2025-11,73,4.657,6.35,extracted_data/September_2025/10.1101_2025.04.16.648930_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.22.649928_v1,10.1101/2025.04.22.649928,High-quality metagenome assembly from nanopore reads with nanoMDBG,v1,2025-04-22,Bioinformatics,Nature Communications,10.1038/s41467-026-69760-y,2026-03-06,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.22.649928_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.25.650565_v1,10.1101/2025.04.25.650565,A global survey of intramolecular isopeptide bonds,v1,2025-04-25,Bioinformatics,Protein Science,10.1002/pro.70342,2025-12,73,4.657,6.35,extracted_data/April_2025/10.1101_2025.04.25.650565_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.28.650897_v2,10.1101/2025.04.28.650897,ScIsoX: A Multidimensional Framework for Measuring Isoform-Level Transcriptomic Complexity in Single Cells,v2,2025-04-28,Bioinformatics,Genome Biology,10.1186/s13059-025-03758-5,2025-09-22,53,5.710,9.04,extracted_data/May_2025/10.1101_2025.04.28.650897_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.29.651183_v1,10.1101/2025.04.29.651183,Enriching stabilizing mutations through automated analysis of molecular dynamics simulations using BoostMut,v1,2025-04-29,Bioinformatics,Protein Science,10.1002/pro.70334,2025-11,73,4.657,6.35,extracted_data/May_2025/10.1101_2025.04.29.651183_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.04.29.651261_v1,10.1101/2025.04.29.651261,RECUR: Identifying recurrent amino acid substitutions from multiple sequence alignments,v1,2025-04-29,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msag036,2026-02-02,89,4.085,5.04,extracted_data/May_2025/10.1101_2025.04.29.651261_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.06.652497_v1,10.1101/2025.05.06.652497,Guiding clustering and annotation in single-cell RNA sequencing using the average overlap metric,v1,2025-05-06,Bioinformatics,Molecular Systems Biology,10.1038/s44320-025-00176-4,2025-12-08,70,4.783,7.15,extracted_data/May_2025/10.1101_2025.05.06.652497_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.08.652964_v1,10.1101/2025.05.08.652964,"RAMEN: Dissecting individual, additive and interactive gene-environment contributions to DNA methylome variability in cord blood",v1,2025-05-08,Bioinformatics,Genome Biology,10.1186/s13059-025-03864-4,2025-12-10,53,5.710,9.04,extracted_data/May_2025/10.1101_2025.05.08.652964_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.08.652986_v1,10.1101/2025.05.08.652986,Developing a general AI model for integrating diverse genomic modalities and comprehensive genomic knowledge,v1,2025-05-08,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1269,2025-11-13,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.08.652986_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.09.652992_v1,10.1101/2025.05.09.652992,TidyMass2: Advancing LC-MS Untargeted Metabolomics Through Metabolite Origin Inference and Metabolic Feature-based Functional Module Analysis,v1,2025-05-09,Bioinformatics,Nature Communications,10.1038/s41467-026-68464-7,2026-01-17,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.09.652992_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.10.653247_v1,10.1101/2025.05.10.653247,Harmonizing single cell 3D genome data with STARK and scNucleome,v1,2025-05-10,Bioinformatics,Genome Biology,10.1186/s13059-026-03938-x,2026-01-21,53,5.710,9.04,extracted_data/May_2025/10.1101_2025.05.10.653247_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.11.653308_v2,10.1101/2025.05.11.653308,T-SCAPE: T-cell Immunogenicity Scoring via Cross-domain Aided Predictive Engine,v2,2025-05-11,Bioinformatics,Science Advances,10.1126/sciadv.adz8759,2025-12-05,79,4.324,12.06,extracted_data/September_2025/10.1101_2025.05.11.653308_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.12.653318_v1,10.1101/2025.05.12.653318,Artificial Intelligence And First Principle Methods In Protein Redesign: A Marriage Of Convenience?,v1,2025-05-12,Bioinformatics,Protein Science,10.1002/pro.70210,2025-08,73,4.657,6.35,extracted_data/May_2025/10.1101_2025.05.12.653318_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.16.654561_v3,10.1101/2025.05.16.654561,Translational buffering tunes gene expression in mice and humans,v3,2025-05-16,Bioinformatics,Genome Biology,10.1186/s13059-026-04010-4,2026-02-26,53,5.710,9.04,extracted_data/January_2026/10.1101_2025.05.16.654561_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.19.655006_v1,10.1101/2025.05.19.655006,Cross-Species Prediction of Histone Modifications in Plants via Deep Learning,v1,2025-05-19,Bioinformatics,Genome Biology,10.1186/s13059-025-03929-4,2026-01-09,53,5.710,9.04,extracted_data/May_2025/10.1101_2025.05.19.655006_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.22.653656_v1,10.1101/2025.05.22.653656,metagRoot: A comprehensive database of protein families associated with plant root microbiomes,v1,2025-05-22,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf862,2026-01-06,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.22.653656_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.22.655115_v1,10.1101/2025.05.22.655115,Prevalence of Group II Introns in Phage Genomes,v1,2025-05-22,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf761,2025-08-11,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.22.655115_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.27.656447_v1,10.1101/2025.05.27.656447,Analysis of isobaric quantitative proteomic data using TMT-Integrator and FragPipe computational platform,v1,2025-05-27,Bioinformatics,Nature Communications,10.1038/s41467-026-70118-7,2026-03-02,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.05.27.656447_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.05.30.656561_v3,10.1101/2025.05.30.656561,A Systematic Benchmark of High-Accuracy PacBio Long-Read RNA Sequencing for Transcript-Level Quantification,v3,2025-05-30,Bioinformatics,Genome Biology,10.1186/s13059-026-03988-1,2026-02-25,53,5.710,9.04,extracted_data/December_2025/10.1101_2025.05.30.656561_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.06.06.656536_v1,10.1101/2025.06.06.656536,Ψ-Atlas: an integrated atlas for pseudouridine epitranscriptome,v1,2025-06-06,Bioinformatics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzag004,2026-01-23,98,3.964,7.21,extracted_data/June_2025/10.1101_2025.06.06.656536_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.06.15.659749_v1,10.1101/2025.06.15.659749,Predicting Disease-Specific Histone Modifications and Functional Effects of Non-coding Variants by Leveraging DNA Language Models,v1,2025-06-15,Bioinformatics,Genome Biology,10.1186/s13059-026-04003-3,2026-02-14,53,5.710,9.04,extracted_data/June_2025/10.1101_2025.06.15.659749_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.06.17.660094_v1,10.1101/2025.06.17.660094,CellMentor: Cell-Type Aware Dimensionality Reduction for Single-cell RNA-Sequencing Data,v1,2025-06-17,Bioinformatics,Nature Communications,10.1038/s41467-025-67088-7,2025-12-11,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.17.660094_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.06.18.660298_v2,10.1101/2025.06.18.660298,Atomic resolution ensembles of intrinsically disordered proteins with Alphafold,v2,2025-06-18,Bioinformatics,Nature Communications,10.1038/s41467-026-69172-y,2026-02-05,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.06.18.660298_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.06.22.660968_v1,10.1101/2025.06.22.660968,PlasRAG: comprehensive plasmid characterization and retrieval through sequence-text alignment,v1,2025-06-22,Bioinformatics,Genome Biology,10.1186/s13059-026-03966-7,2026-02-07,53,5.710,9.04,extracted_data/June_2025/10.1101_2025.06.22.660968_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.06.24.661380_v1,10.1101/2025.06.24.661380,Accurate variant effect estimation in FACS-based deep mutational scanning data with Lilace,v1,2025-06-24,Bioinformatics,Genome Biology,10.1186/s13059-026-03934-1,2026-01-27,53,5.710,9.04,extracted_data/June_2025/10.1101_2025.06.24.661380_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.06.25.661532_v2,10.1101/2025.06.25.661532,AlphaGenome: advancing regulatory variant effect prediction with a unified DNA sequence model,v2,2025-06-25,Bioinformatics,Nature,10.1038/s41586-025-10014-0,2026-01-29,7,18.288,18.47,extracted_data/July_2025/10.1101_2025.06.25.661532_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.07.07.663529_v1,10.1101/2025.07.07.663529,Benchmarking Large Language Models for Predictive Modeling in Biomedical Research With a Focus on Reproductive Health,v1,2025-07-07,Bioinformatics,Cell Reports Medicine,10.1016/j.xcrm.2026.102594,2026-02,92,4.028,8.08,extracted_data/July_2025/10.1101_2025.07.07.663529_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.07.07.663545_v1,10.1101/2025.07.07.663545,A LARGE-SCALE EVOLUTIONARY AND STRUCTURAL ANALYSIS OF CLC CHANNELS AND TRANSPORTERS,v1,2025-07-07,Bioinformatics,Protein Science,10.1002/pro.70389,2025-12,73,4.657,6.35,extracted_data/July_2025/10.1101_2025.07.07.663545_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.07.07.663595_v2,10.1101/2025.07.07.663595,"A Corporative Language Model for Protein–Protein Interaction, Binding Affinity, and Interface Contact Prediction",v2,2025-07-07,Bioinformatics,Nature Communications,10.1038/s41467-026-70457-5,2026-03-10,71,4.761,14.63,extracted_data/December_2025/10.1101_2025.07.07.663595_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.07.08.663658_v1,10.1101/2025.07.08.663658,Campolina: A Deep Neural Framework for Accurate Segmentation of Nanopore Signals,v1,2025-07-08,Bioinformatics,Genome Biology,10.1186/s13059-026-03950-1,2026-01-27,53,5.710,9.04,extracted_data/July_2025/10.1101_2025.07.08.663658_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.07.13.664626_v3,10.1101/2025.07.13.664626,piqtree: A Python Package for Seamless Phylogenetic Inference with IQ-TREE,v3,2025-07-13,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msag061,2026-03-02,89,4.085,5.04,extracted_data/December_2025/10.1101_2025.07.13.664626_v3.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.07.18.665519_v1,10.1101/2025.07.18.665519,The MicrobeAtlas database: Global trends and insights into Earth’s microbial ecosystems,v1,2025-07-18,Bioinformatics,Cell,10.1016/j.cell.2026.01.021,2026-04,3,22.612,30.22,extracted_data/July_2025/10.1101_2025.07.18.665519_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.07.23.666355_v1,10.1101/2025.07.23.666355,NeoPrecis: Enhancing Immunotherapy Response Prediction through Integration of Qualified Immunogenicity and Clonality-Aware Neoantigen Landscapes,v1,2025-07-23,Bioinformatics,Nature Communications,10.1038/s41467-026-68651-6,2026-01-23,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.23.666355_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.07.30.667754_v2,10.1101/2025.07.30.667754,Benchmarking Alignment Strategies for Hi-C Reads in Metagenomic Hi-C Data,v2,2025-07-30,Bioinformatics,Genome Biology,10.1186/s13059-026-03970-x,2026-01-30,53,5.710,9.04,extracted_data/October_2025/10.1101_2025.07.30.667754_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.07.31.667856_v1,10.1101/2025.07.31.667856,The Human Organ Atlas,v1,2025-07-31,Bioinformatics,Science Advances,10.1126/sciadv.adz2240,2026-03-13,79,4.324,12.06,extracted_data/August_2025/10.1101_2025.07.31.667856_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.08.01.668088_v1,10.1101/2025.08.01.668088,quick analysis of sedimentary ancient DNA using quicksand,v1,2025-08-01,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msaf305,2025-11-28,89,4.085,5.04,extracted_data/August_2025/10.1101_2025.08.01.668088_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.08.05.668817_v1,10.1101/2025.08.05.668817,Protein Structure Informed Bacteriophage Genome Annotation with Phold,v1,2025-08-05,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1448,2026-01-05,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.05.668817_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.08.06.668843_v1,10.1101/2025.08.06.668843,PBMCpedia: A Harmonized PBMC scRNA-seq Database With Unified Mapping and Enhanced Celltype Annotation,v1,2025-08-06,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1245,2026-01-06,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.06.668843_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.08.12.669823_v1,10.1101/2025.08.12.669823,"IMGT® at scale: FAIR, Dynamic and Automated Tools for Immune Locus Analysis",v1,2025-08-12,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1024,2026-01-06,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.12.669823_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.08.19.671089_v2,10.1101/2025.08.19.671089,Advancing Codon Language Modeling with Synonymous Codon Constrained Masking,v2,2025-08-19,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkag166,2026-02-24,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.19.671089_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.08.20.671210_v1,10.1101/2025.08.20.671210,"BiG-SCAPE 2.0 and BiG-SLiCE 2.0: scalable, accurate and interactive sequence clustering of metabolic gene clusters",v1,2025-08-20,Bioinformatics,Nature Communications,10.1038/s41467-026-68733-5,2026-01-24,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.08.20.671210_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.08.20.671349_v1,10.1101/2025.08.20.671349,CanID: a robust and accurate RNAseq Expression-based diagnostic classification scheme for pediatric malignancies,v1,2025-08-20,Bioinformatics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf122,2025-11-29,98,3.964,7.21,extracted_data/August_2025/10.1101_2025.08.20.671349_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.08.22.671849_v1,10.1101/2025.08.22.671849,PRECOG update: An augmented resource of clinical outcome associations with gene expression for pediatric and immunotherapy cohorts,v1,2025-08-22,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1215,2026-01-06,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.22.671849_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.08.27.671485_v1,10.1101/2025.08.27.671485,KANN: estimation of genetic ancestry profiles by nearest neighbor regression,v1,2025-08-27,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkag209,2026-02-24,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.27.671485_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.09.05.674505_v1,10.1101/2025.09.05.674505,Human-scATAC-Corpus: a comprehensive database of scATAC-seq data,v1,2025-09-05,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1216,2026-01-06,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.05.674505_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.09.10.675416_v1,10.1101/2025.09.10.675416,QSProteome: A Community-Driven Interactive Platform for Large-Scale Exploration and Evaluation of Predicted Protein Complex Structures,v1,2025-09-10,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1099,2026-01-06,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.10.675416_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.09.11.675512_v1,10.1101/2025.09.11.675512,OmniPath: integrated knowledgebase for multi-omics analysis,v1,2025-09-11,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1126,2026-01-06,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.11.675512_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.09.16.676477_v1,10.1101/2025.09.16.676477,HUBMet: An integrative database and analytical platform for human blood metabolites and metabolite-protein associations,v1,2025-09-16,Bioinformatics,Genome Biology,10.1186/s13059-025-03922-x,2025-12-27,53,5.710,9.04,extracted_data/September_2025/10.1101_2025.09.16.676477_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.09.18.677148_v1,10.1101/2025.09.18.677148,Variant-resolved prediction of context-specific isoform variation with a graph-based attention model,v1,2025-09-18,Bioinformatics,Cell Genomics,10.1016/j.xgen.2025.101126,2026-04,46,6.238,7.85,extracted_data/September_2025/10.1101_2025.09.18.677148_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.09.23.678147_v1,10.1101/2025.09.23.678147,The Implications of Alternative Splicing Regulation for Maximum Lifespan,v1,2025-09-23,Bioinformatics,Nature Communications,10.1038/s41467-025-65339-1,2025-11-24,71,4.761,14.63,extracted_data/September_2025/10.1101_2025.09.23.678147_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.09.24.678028_v2,10.1101/2025.09.24.678028,ProteinDJ: a high-performance and modular protein design pipeline,v2,2025-09-24,Bioinformatics,Protein Science,10.1002/pro.70464,2026-02,73,4.657,6.35,extracted_data/December_2025/10.1101_2025.09.24.678028_v2.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.09.27.678816_v1,10.1101/2025.09.27.678816,ChromPolymerDB: A High-Resolution Database of Single-Cell 3D Chromatin Structures for Functional Genomics,v1,2025-09-27,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkaf1233,2026-01-06,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.09.27.678816_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.09.29.679108_v1,10.1101/2025.09.29.679108,MitoNGS: an online platform to analyze fish metabarcoding data in high-resolution,v1,2025-09-29,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msag046,2026-03-02,89,4.085,5.04,extracted_data/October_2025/10.1101_2025.09.29.679108_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.09.30.679045_v1,10.1101/2025.09.30.679045,Accurate and efficient phylogenetic inference through end-to-end deep learning,v1,2025-09-30,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msaf260,2025-10-29,89,4.085,5.04,extracted_data/October_2025/10.1101_2025.09.30.679045_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.11.17.688892_v1,10.1101/2025.11.17.688892,PCLIPtools: A Robust Framework for Identifying RNA-Protein Interaction Sites from PAR-CLIP experiments,v1,2025-11-17,Bioinformatics,Nucleic Acids Research,10.1093/nar/gkag062,2026-01-22,34,7.776,16.90,extracted_data/November_2025/10.1101_2025.11.17.688892_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.11.18.688681_v1,10.1101/2025.11.18.688681,MAAD: Multidimensional Antiviral Antibody Database,v1,2025-11-18,Bioinformatics,Protein & Cell,10.1093/procel/pwaf106,2025-12-06,60,5.392,7.91,extracted_data/November_2025/10.1101_2025.11.18.688681_v1.xml,top100_bgm_multi_journals.csv
bioinformatics,10.1101_2025.11.26.690634_v1,10.1101/2025.11.26.690634,Displacement-Optimized Tanglegrams for Trees and Networks,v1,2025-11-26,Bioinformatics,Molecular Biology and Evolution,10.1093/molbev/msag066,2026-03-02,89,4.085,5.04,extracted_data/November_2025/10.1101_2025.11.26.690634_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.01.616117_v1,10.1101/2024.10.01.616117,Rapid two-step target capture ensures efficient CRISPR-Cas9-guided genome editing,v1,2024-10-01,Biophysics,Molecular Cell,10.1016/j.molcel.2025.03.024,2025-05,26,9.051,12.04,extracted_data/October_2024/10.1101_2024.10.01.616117_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.01.616181_v1,10.1101/2024.10.01.616181,Structural basis for saxitoxin congener binding and neutralization by anuran saxiphilins,v1,2024-10-01,Biophysics,Nature Communications,10.1038/s41467-025-58903-2,2025-04-24,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.01.616181_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.03.616451_v1,10.1101/2024.10.03.616451,De novo design of ATPase based on the blueprint optimized for harboring the P-loop motif,v1,2024-10-03,Biophysics,Protein Science,10.1002/pro.70132,2025-06,73,4.657,6.35,extracted_data/October_2024/10.1101_2024.10.03.616451_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.04.616715_v1,10.1101/2024.10.04.616715,Transport and InsP8 activation mechanisms of the human inorganic phosphate exporter XPR1,v1,2024-10-04,Biophysics,Nature Communications,10.1038/s41467-025-58076-y,2025-03-20,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.04.616715_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.07.616979_v2,10.1101/2024.10.07.616979,"Cardiomyopathic mutations of lamin A perturb mutual interactions of lamin, nuclear membrane, and chromatin leading to LLPS",v2,2024-10-07,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf615,2025-07-19,34,7.776,16.90,extracted_data/August_2025/10.1101_2024.10.07.616979_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.08.617332_v1,10.1101/2024.10.08.617332,Afadin mediates cadherin-catenin complex clustering on F-actin linked to cooperative binding and filament curvature,v1,2024-10-08,Biophysics,Science Advances,10.1126/sciadv.adu0989,2025-02-14,79,4.324,12.06,extracted_data/October_2024/10.1101_2024.10.08.617332_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.09.617442_v1,10.1101/2024.10.09.617442,A FAN1 point mutation associated with accelerated Huntington’s disease progression alters its PCNA-mediated assembly on DNA,v1,2024-10-09,Biophysics,Nature Communications,10.1038/s41467-025-59324-x,2025-05-14,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.09.617442_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.10.617549_v1,10.1101/2024.10.10.617549,Structural basis of SIRT7 nucleosome engagement and substrate specificity,v1,2024-10-10,Biophysics,Nature Communications,10.1038/s41467-025-56529-y,2025-02-04,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.10.617549_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.10.617642_v2,10.1101/2024.10.10.617642,HEXIM1 inter-monomer autoinhibition governs 7SK RNA binding specificity and P-TEFb inactivation,v2,2024-10-10,Biophysics,Nature Communications,10.1038/s41467-026-68285-8,2026-01-15,71,4.761,14.63,extracted_data/December_2025/10.1101_2024.10.10.617642_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.11.617674_v1,10.1101/2024.10.11.617674,RNA Polymerase II is a Polar Roadblock to a Progressing DNA Fork,v1,2024-10-11,Biophysics,Nature Communications,10.1038/s41467-025-63662-1,2025-09-29,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.11.617674_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.12.617288_v1,10.1101/2024.10.12.617288,ExoSloNano: Multi-Modal Nanogold Tags for identification of Macromolecules in Live Cells & Cryo-Electron Tomograms,v1,2024-10-12,Biophysics,Nature Methods,10.1038/s41592-025-02928-4,2026-01,8,17.251,13.51,extracted_data/October_2024/10.1101_2024.10.12.617288_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.12.618031_v2,10.1101/2024.10.12.618031,Impacts of sequence and structure on pyrrolocytosine fluorescence in RNA,v2,2024-10-12,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf262,2025-04-10,34,7.776,16.90,extracted_data/March_2025/10.1101_2024.10.12.618031_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.13.617916_v1,10.1101/2024.10.13.617916,Insights into a clock’s fidelity through vesicular encapsulation,v1,2024-10-13,Biophysics,Nature Communications,10.1038/s41467-025-61844-5,2025-07-21,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.13.617916_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.14.618227_v1,10.1101/2024.10.14.618227,Torsion is a Dynamic Regulator of DNA Replication Stalling and Reactivation,v1,2024-10-14,Biophysics,Nature Communications,10.1038/s41467-025-65567-5,2025-11-26,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.14.618227_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.15.616105_v4,10.1101/2024.10.15.616105,Impact of anionic lipids on the energy landscape of conformational transition in anion exchanger 1 (AE1),v4,2024-10-15,Biophysics,Nature Communications,10.1038/s41467-025-66786-6,2025-11-26,71,4.761,14.63,extracted_data/March_2025/10.1101_2024.10.15.616105_v4.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.15.618270_v1,10.1101/2024.10.15.618270,Chromatin Buffers Torsional Stress During Transcription,v1,2024-10-15,Biophysics,Science,10.1126/science.adv0134,2026-03-26,19,10.416,15.26,extracted_data/October_2024/10.1101_2024.10.15.618270_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.15.618463_v2,10.1101/2024.10.15.618463,Structural organization of p62 filaments and the cellular ultrastructure of calcium-rich p62-enwrapped lipid droplet cargo,v2,2024-10-15,Biophysics,Nature Communications,10.1038/s41467-025-66785-7,2025-11-28,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.10.15.618463_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.17.618867_v2,10.1101/2024.10.17.618867,Phosphorylation Toggles the SARS-CoV-2 Nucleocapsid Protein Between Two Membrane-Associated Condensate States,v2,2024-10-17,Biophysics,Nature Communications,10.1038/s41467-025-62922-4,2025-08-26,71,4.761,14.63,extracted_data/June_2025/10.1101_2024.10.17.618867_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.20.619145_v1,10.1101/2024.10.20.619145,"Controlling interfacial protein adsorption, desorption and aggregation in biomolecular condensates",v1,2024-10-20,Biophysics,Nature Communications,10.1038/s41467-025-65030-5,2025-11-19,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.20.619145_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.24.620099_v1,10.1101/2024.10.24.620099,A high throughput single molecule platform to study DNA supercoiling effect on protein-DNA interactions,v1,2024-10-24,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf581,2025-06-20,34,7.776,16.90,extracted_data/October_2024/10.1101_2024.10.24.620099_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.25.620026_v1,10.1101/2024.10.25.620026,Single-molecule analysis reveals the mechanism of chromatin ubiquitylation by variant PRC1 complexes,v1,2024-10-25,Biophysics,Science Advances,10.1126/sciadv.adt7013,2025-05-23,79,4.324,12.06,extracted_data/October_2024/10.1101_2024.10.25.620026_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.25.620294_v1,10.1101/2024.10.25.620294,Structure of AcMNPV nucleocapsid reveals DNA portal organization and packaging apparatus of circular dsDNA baculovirus,v1,2024-10-25,Biophysics,Nature Communications,10.1038/s41467-025-60152-2,2025-05-24,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.25.620294_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.25.620295_v1,10.1101/2024.10.25.620295,LassoESM: A tailored language model for enhanced lasso peptide property prediction,v1,2024-10-25,Biophysics,Nature Communications,10.1038/s41467-025-63412-3,2025-09-29,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.25.620295_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.31.621265_v1,10.1101/2024.10.31.621265,Model-free photon analysis of diffusion-based single-molecule FRET experiments,v1,2024-10-31,Biophysics,Nature Communications,10.1038/s41467-025-60764-8,2025-07-01,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.10.31.621265_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.10.31.621304_v1,10.1101/2024.10.31.621304,Structural context modulates the conformational ensemble of the intrinsically disordered amino terminus of α-synuclein,v1,2024-10-31,Biophysics,Journal of the American Chemical Society,10.1021/jacs.4c15653,2025-04-09,55,5.554,15.01,extracted_data/November_2024/10.1101_2024.10.31.621304_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.05.622047_v1,10.1101/2024.11.05.622047,Protein-RNA condensation kinetics via filamentous nanoclusters,v1,2024-11-05,Biophysics,Protein Science,10.1002/pro.70136,2025-06,73,4.657,6.35,extracted_data/November_2024/10.1101_2024.11.05.622047_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.07.622281_v1,10.1101/2024.11.07.622281,DeFrND: detergent-free reconstitution into native nanodiscs with designer membrane scaffold peptides,v1,2024-11-07,Biophysics,Nature Communications,10.1038/s41467-025-63275-8,2025-08-26,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.07.622281_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.08.622658_v2,10.1101/2024.11.08.622658,Gene-scale in vitro reconstitution reveals histone acetylation directly controls chromatin architecture,v2,2024-11-08,Biophysics,Science Advances,10.1126/sciadv.adx9282,2025-11-21,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.08.622658_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.12.623272_v3,10.1101/2024.11.12.623272,Stress Changes the Material State of a Bacterial Biomolecular Condensate and Shifts its Function from mRNA Decay to Storage,v3,2024-11-12,Biophysics,Nature Communications,10.1038/s41467-025-65358-y,2025-11-14,71,4.761,14.63,extracted_data/September_2025/10.1101_2024.11.12.623272_v3.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.14.623559_v1,10.1101/2024.11.14.623559,Auto-regulation of the real-time kinetics of the human mitochondrial replicative helicase,v1,2024-11-14,Biophysics,Nature Communications,10.1038/s41467-025-60289-0,2025-07-01,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.14.623559_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.14.623569_v1,10.1101/2024.11.14.623569,Structural insights into the opening mechanism of C1C2 channelrhodopsin,v1,2024-11-14,Biophysics,Journal of the American Chemical Society,10.1021/jacs.4c15402,2025-01-08,55,5.554,15.01,extracted_data/November_2024/10.1101_2024.11.14.623569_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.14.623598_v1,10.1101/2024.11.14.623598,Steric Repulsion Counteracts ER-to-Lipid Droplet Protein Movement,v1,2024-11-14,Biophysics,Science Advances,10.1126/sciadv.adu6998,2025-09-26,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.14.623598_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.17.623987_v1,10.1101/2024.11.17.623987,Mechanism of cooperative strigolactone perception by the MAX2 ubiquitin ligase–receptor–substrate complex,v1,2024-11-17,Biophysics,Nature Communications,10.1038/s41467-025-65205-0,2025-11-21,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.17.623987_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.21.624652_v1,10.1101/2024.11.21.624652,Laser Flash Melting Cryo-EM Samples to Overcome Preferred Orientation,v1,2024-11-21,Biophysics,Nature Methods,10.1038/s41592-025-02796-y,2025-09,8,17.251,13.51,extracted_data/November_2024/10.1101_2024.11.21.624652_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.21.624739_v1,10.1101/2024.11.21.624739,Reconciling competing models on the roles of condensates and soluble complexes in transcription factor function,v1,2024-11-21,Biophysics,Molecular Cell,10.1016/j.molcel.2025.06.008,2025-07,26,9.051,12.04,extracted_data/November_2024/10.1101_2024.11.21.624739_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.24.625074_v1,10.1101/2024.11.24.625074,Assembly and lipid-gating of LRRC8A:D volume-regulated anion channels,v1,2024-11-24,Biophysics,Nature Communications,10.1038/s41467-025-67052-5,2025-12-12,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.24.625074_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.25.625138_v1,10.1101/2024.11.25.625138,Influence of Contact Map Topology on RNA Structure Prediction,v1,2024-11-25,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf1370,2025-11-26,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.25.625138_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.27.625625_v1,10.1101/2024.11.27.625625,Structural insights into the force-transducing mechanism of a motor-stator complex important for bacterial outer membrane lipid homeostasis,v1,2024-11-27,Biophysics,Journal of the American Chemical Society,10.1021/jacs.4c18050,2025-07-16,55,5.554,15.01,extracted_data/November_2024/10.1101_2024.11.27.625625_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.11.28.625872_v1,10.1101/2024.11.28.625872,Smart 3D super-resolution microscopy reveals the architecture of the RNA scaffold in a nuclear body,v1,2024-11-28,Biophysics,Nature Communications,10.1038/s41467-025-65723-x,2025-11-27,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.28.625872_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.02.626213_v1,10.1101/2024.12.02.626213,Dynamic ensembles of SARS-CoV-2 N-protein reveal head-to-head coiled-coil-driven oligomerization and phase separation,v1,2024-12-02,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf502,2025-06-06,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.02.626213_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.03.624087_v1,10.1101/2024.12.03.624087,Best practice mass photometry: A guide to optimal single molecule mass measurement,v1,2024-12-03,Biophysics,Nature Protocols,10.1038/s41596-025-01255-4,2025-10-13,50,5.854,16.55,extracted_data/December_2024/10.1101_2024.12.03.624087_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.03.626386_v2,10.1101/2024.12.03.626386,Remission spectroscopy resolves the mode of action of bedaquiline within living mycobacteria,v2,2024-12-03,Biophysics,Nature Communications,10.1038/s41467-025-65928-0,2025-11-25,71,4.761,14.63,extracted_data/July_2025/10.1101_2024.12.03.626386_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.03.626640_v1,10.1101/2024.12.03.626640,Mechanism of small heat shock protein client sequestration and induced polydispersity,v1,2024-12-03,Biophysics,Nature Communications,10.1038/s41467-025-58964-3,2025-04-16,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.03.626640_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.03.626645_v1,10.1101/2024.12.03.626645,Frustration in the Protein-Protein interface Plays a Central Role in the Cooperativity of PROTAC Ternary Complexes,v1,2024-12-03,Biophysics,Nature Communications,10.1038/s41467-025-63713-7,2025-09-29,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.03.626645_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.05.627008_v1,10.1101/2024.12.05.627008,Unambiguous assignment of kinked beta sheets leads to insights into molecular grammar of reversibility in biomolecular condensates,v1,2024-12-05,Biophysics,Protein Science,10.1002/pro.70266,2025-09,73,4.657,6.35,extracted_data/December_2024/10.1101_2024.12.05.627008_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.05.627087_v1,10.1101/2024.12.05.627087,Design of a Water-Soluble CD20 Antigen with Computational Epitope Scaffolding,v1,2024-12-05,Biophysics,Protein Science,10.1002/pro.70184,2025-08,73,4.657,6.35,extracted_data/December_2024/10.1101_2024.12.05.627087_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.08.627333_v1,10.1101/2024.12.08.627333,Naturally ornate RNA-only complexes revealed by cryo-EM,v1,2024-12-08,Biophysics,Nature,10.1038/s41586-025-09073-0,2025-07-24,7,18.288,18.47,extracted_data/December_2024/10.1101_2024.12.08.627333_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.09.627445_v1,10.1101/2024.12.09.627445,The human RAD52 complex undergoes phase separation and facilitates bundling and end-to-end tethering of RAD51 presynaptic filaments,v1,2024-12-09,Biophysics,Nucleic Acids Research,10.1093/nar/gkag043,2026-01-22,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.09.627445_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.10.627803_v2,10.1101/2024.12.10.627803,Cells Prioritize the Regulation of Cell Mass Density,v2,2024-12-10,Biophysics,Science Advances,10.1126/sciadv.adv9759,2025-08-29,79,4.324,12.06,extracted_data/January_2025/10.1101_2024.12.10.627803_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.10.627839_v1,10.1101/2024.12.10.627839,Solution structure of the Z0 domain from transcription repressor BCL11A sheds light on the sequence properties of protein-binding zinc-fingers,v1,2024-12-10,Biophysics,Protein Science,10.1002/pro.70097,2025-04,73,4.657,6.35,extracted_data/December_2024/10.1101_2024.12.10.627839_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.10.627859_v2,10.1101/2024.12.10.627859,Recognizing amino acid sidechains in a medium resolution cryo-electron density map,v2,2024-12-10,Biophysics,Protein Science,10.1002/pro.70217,2025-08,73,4.657,6.35,extracted_data/May_2025/10.1101_2024.12.10.627859_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.11.627779_v1,10.1101/2024.12.11.627779,Rational design of 19F NMR labelling sites to probe protein structure and interactions,v1,2024-12-11,Biophysics,Nature Communications,10.1038/s41467-025-59105-6,2025-05-08,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.11.627779_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.14.628482_v1,10.1101/2024.12.14.628482,Quantitative Detection of Amyloid Fibrils using Fluorescence Resonance Energy Transfer (FRET) Between Engineered Yellow and Cyan Proteins,v1,2024-12-14,Biophysics,Protein Science,10.1002/pro.70094,2025-04,73,4.657,6.35,extracted_data/December_2024/10.1101_2024.12.14.628482_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.16.628676_v4,10.1101/2024.12.16.628676,Charged peptides enriched in aromatic residues decelerate condensate ageing driven by cross-β-sheet formation,v4,2024-12-16,Biophysics,Nature Communications,10.1038/s41467-025-62686-x,2025-08-28,71,4.761,14.63,extracted_data/August_2025/10.1101_2024.12.16.628676_v4.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.16.628790_v1,10.1101/2024.12.16.628790,Capturing the Conformational Heterogeneity of HSPB1 Chaperone Oligomers at Atomic Resolution,v1,2024-12-16,Biophysics,Journal of the American Chemical Society,10.1021/jacs.4c18668,2025-05-07,55,5.554,15.01,extracted_data/January_2025/10.1101_2024.12.16.628790_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.20.629585_v1,10.1101/2024.12.20.629585,A Palette of Bridged Bicycle-Strengthened Fluorophores,v1,2024-12-20,Biophysics,Nature Methods,10.1038/s41592-025-02693-4,2025-06,8,17.251,13.51,extracted_data/December_2024/10.1101_2024.12.20.629585_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.20.629849_v1,10.1101/2024.12.20.629849,An evolutionarily conserved tryptophan cage promotes folding of the extended RNA recognition motif in the hnRNPR-like protein family,v1,2024-12-20,Biophysics,Protein Science,10.1002/pro.70127,2025-05,73,4.657,6.35,extracted_data/December_2024/10.1101_2024.12.20.629849_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.22.629944_v1,10.1101/2024.12.22.629944,Cryogenic light microscopy with Ångstrom precision deciphers structural conformations of PIEZO1,v1,2024-12-22,Biophysics,Science Advances,10.1126/sciadv.adw4402,2025-08-22,79,4.324,12.06,extracted_data/December_2024/10.1101_2024.12.22.629944_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.22.629966_v1,10.1101/2024.12.22.629966,A single main-chain hydrogen bond required to keep GABAA receptors closed,v1,2024-12-22,Biophysics,Nature Communications,10.1038/s41467-025-61447-0,2025-07-03,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.22.629966_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.22.630011_v1,10.1101/2024.12.22.630011,Synergistic activation of the human phosphate exporter XPR1 by KIDINS220 and inositol pyrophosphate,v1,2024-12-22,Biophysics,Nature Communications,10.1038/s41467-025-58200-y,2025-03-24,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.22.630011_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.23.627571_v1,10.1101/2024.12.23.627571,Nucleosome Spacing Can Fine-Tune Higher Order Chromatin Assembly,v1,2024-12-23,Biophysics,Nature Communications,10.1038/s41467-025-61482-x,2025-07-09,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.23.627571_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.24.630169_v1,10.1101/2024.12.24.630169,Selective ion binding and uptake shape the microenvironment of biomolecular condensates,v1,2024-12-24,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c07295,2025-07-23,55,5.554,15.01,extracted_data/December_2024/10.1101_2024.12.24.630169_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2024.12.30.630764_v2,10.1101/2024.12.30.630764,Nde1 Promotes Lis1 Binding to Full-Length Autoinhibited Human Dynein-1,v2,2024-12-30,Biophysics,Nature Chemical Biology,10.1038/s41589-025-01981-6,2026-02,56,5.521,7.32,extracted_data/January_2025/10.1101_2024.12.30.630764_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.01.631016_v1,10.1101/2025.01.01.631016,A tool to dissect heterotypic determinants of homotypic protein phase behavior,v1,2025-01-01,Biophysics,Protein Science,10.1002/pro.70194,2025-07,73,4.657,6.35,extracted_data/January_2025/10.1101_2025.01.01.631016_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.03.631214_v1,10.1101/2025.01.03.631214,The WRC domain of GRF transcription factors. Structure and DNA recognition,v1,2025-01-03,Biophysics,Protein Science,10.1002/pro.70172,2025-06,73,4.657,6.35,extracted_data/January_2025/10.1101_2025.01.03.631214_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.10.632062_v4,10.1101/2025.01.10.632062,Molecular Insights into Species-Specific ACE2 Recognition of Coronavirus HKU5,v4,2025-01-10,Biophysics,Nature Communications,10.1038/s41467-025-65883-w,2025-12-04,71,4.761,14.63,extracted_data/December_2025/10.1101_2025.01.10.632062_v4.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.10.632299_v1,10.1101/2025.01.10.632299,A post-assembly conformational change makes the SARS-CoV-2 polymerase elongation-competent,v1,2025-01-10,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf450,2025-05-22,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.10.632299_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.10.632390_v1,10.1101/2025.01.10.632390,A low-complexity linker as a driver of intra- and intermolecular interactions in DNAJB chaperones,v1,2025-01-10,Biophysics,Nature Communications,10.1038/s41467-025-60063-2,2025-05-31,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.10.632390_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.10.632437_v1,10.1101/2025.01.10.632437,MISO: Microfluidic protein isolation enables single particle cryo-EM structure determination from a single cell colony,v1,2025-01-10,Biophysics,Nature Methods,10.1038/s41592-025-02894-x,2025-12,8,17.251,13.51,extracted_data/January_2025/10.1101_2025.01.10.632437_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.10.632485_v1,10.1101/2025.01.10.632485,Cryo-EM captures early intermediate steps in dynein activation by LIS1,v1,2025-01-10,Biophysics,Nature Communications,10.1038/s41467-025-62185-z,2025-08-01,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.10.632485_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.16.633484_v4,10.1101/2025.01.16.633484,Static Three-Dimensional Structures Determine Fast Dynamics Between Distal Loci Pairs in Interphase Chromosomes,v4,2025-01-16,Biophysics,Science Advances,10.1126/sciadv.adx1763,2025-08,79,4.324,12.06,extracted_data/July_2025/10.1101_2025.01.16.633484_v4.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.21.634148_v1,10.1101/2025.01.21.634148,Tunable fluorogenic DNA probes drive fast and high-resolution single-molecule fluorescence imaging,v1,2025-01-21,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf593,2025-07-08,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.21.634148_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.22.634249_v1,10.1101/2025.01.22.634249,Single-molecule tweezers decoding hidden dimerization patterns of membrane proteins within lipid bilayers,v1,2025-01-22,Biophysics,Nature Communications,10.1038/s41467-025-62852-1,2025-08-09,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.22.634249_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.23.634578_v1,10.1101/2025.01.23.634578,Complex Water Networks Visualized through 2.2-2.3 Å Cryogenic Electron Microscopy of RNA,v1,2025-01-23,Biophysics,Nature,10.1038/s41586-025-08855-w,2025-06-05,7,18.288,18.47,extracted_data/January_2025/10.1101_2025.01.23.634578_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.26.634934_v1,10.1101/2025.01.26.634934,Two CTCF motifs impede cohesin-mediated DNA loop extrusion,v1,2025-01-26,Biophysics,Molecular Cell,10.1016/j.molcel.2025.11.001,2025-12,26,9.051,12.04,extracted_data/January_2025/10.1101_2025.01.26.634934_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.27.635025_v1,10.1101/2025.01.27.635025,Dynein-2 is tuned for the A-tubule of the ciliary doublet through tubulin tyrosination,v1,2025-01-27,Biophysics,The EMBO Journal,10.1038/s44318-025-00648-1,2025-11-26,68,4.821,7.14,extracted_data/January_2025/10.1101_2025.01.27.635025_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.27.635099_v1,10.1101/2025.01.27.635099,Emergence of Lignin-Carbohydrate Interactions During Plant Stem Maturation Visualized by Solid-State NMR,v1,2025-01-27,Biophysics,Nature Communications,10.1038/s41467-025-63512-0,2025-08-27,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.27.635099_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.27.635162_v2,10.1101/2025.01.27.635162,Thermodynamic principles link in vitro transcription factor affinities to single-molecule chromatin states in cells,v2,2025-01-27,Biophysics,Cell,10.1016/j.cell.2025.11.008,2026-01,3,22.612,30.22,extracted_data/January_2025/10.1101_2025.01.27.635162_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.01.28.635015_v1,10.1101/2025.01.28.635015,Capturing Nematic Order on Tissue Surfaces of Arbitrary Geometry,v1,2025-01-28,Biophysics,Nature Communications,10.1038/s41467-025-62694-x,2025-08-15,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.28.635015_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.01.636084_v1,10.1101/2025.02.01.636084,Multivalency controls the growth and dynamics of a biomolecular condensate,v1,2025-02-01,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c02947,2025-07-23,55,5.554,15.01,extracted_data/February_2025/10.1101_2025.02.01.636084_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.04.636443_v1,10.1101/2025.02.04.636443,Two-step voltage-sensor activation of the human KV7.4 channel and effect of a deafness-associated mutation,v1,2025-02-04,Biophysics,Nature Communications,10.1038/s41467-026-69249-8,2026-02-05,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.04.636443_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.12.637704_v1,10.1101/2025.02.12.637704,Peripheral heterochromatin tethering is required for chromatin-based nuclear mechanical response,v1,2025-02-12,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf763,2025-08-11,34,7.776,16.90,extracted_data/February_2025/10.1101_2025.02.12.637704_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.12.637953_v1,10.1101/2025.02.12.637953,Reversible lipid mediated pH-gating of connexin-46/50 by cryo-EM,v1,2025-02-12,Biophysics,Nature Communications,10.1038/s41467-026-68311-9,2026-01-12,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.12.637953_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.16.638483_v2,10.1101/2025.02.16.638483,Water-mediated interactions between glycans are weakly repulsive and unexpectedly long-ranged,v2,2025-02-16,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c04126,2025-05-21,55,5.554,15.01,extracted_data/April_2025/10.1101_2025.02.16.638483_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.18.638816_v1,10.1101/2025.02.18.638816,Structural basis for lipid transport at membrane contact sites by the Ist2/Osh6 complex,v1,2025-02-18,Biophysics,Nature Structural & Molecular Biology,10.1038/s41594-025-01660-z,2025-11,48,6.187,6.42,extracted_data/February_2025/10.1101_2025.02.18.638816_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.19.639014_v1,10.1101/2025.02.19.639014,Insights into the structure and modulation of human TWIK-2,v1,2025-02-19,Biophysics,Nature Communications,10.1038/s41467-026-69072-1,2026-01-31,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.19.639014_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.20.639036_v1,10.1101/2025.02.20.639036,Deep learning for fluorescence lifetime predictions enables high-throughput in vivo imaging,v1,2025-02-20,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c03749,2025-07-02,55,5.554,15.01,extracted_data/February_2025/10.1101_2025.02.20.639036_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.20.639096_v1,10.1101/2025.02.20.639096,Structural Plasticity of RRE Stem-Loop II Modulates Nuclear Export of HIV-1 RNA,v1,2025-02-20,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf583,2025-06-20,34,7.776,16.90,extracted_data/February_2025/10.1101_2025.02.20.639096_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.24.640009_v1,10.1101/2025.02.24.640009,Electrokinetic detection of single-molecule phosphorylation,v1,2025-02-24,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c05073,2025-06-25,55,5.554,15.01,extracted_data/February_2025/10.1101_2025.02.24.640009_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.26.640430_v1,10.1101/2025.02.26.640430,Nuclear speckle proteins form intrinsic and MALAT1-dependent microphases,v1,2025-02-26,Biophysics,Cell,10.1016/j.cell.2025.11.026,2026-02,3,22.612,30.22,extracted_data/February_2025/10.1101_2025.02.26.640430_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.02.27.640500_v1,10.1101/2025.02.27.640500,Tubulin transforms Tau and α-synuclein condensates from pathological to physiological,v1,2025-02-27,Biophysics,Nature Communications,10.1038/s41467-026-69618-3,2026-03-03,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.02.27.640500_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.01.640997_v1,10.1101/2025.03.01.640997,A coarse-grained model for disordered proteins under crowded conditions,v1,2025-03-01,Biophysics,Protein Science,10.1002/pro.70232,2025-08,73,4.657,6.35,extracted_data/March_2025/10.1101_2025.03.01.640997_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.04.641540_v1,10.1101/2025.03.04.641540,Accurate prediction of thermoresponsive phase behavior of disordered proteins,v1,2025-03-04,Biophysics,Protein Science,10.1002/pro.70284,2025-10,73,4.657,6.35,extracted_data/March_2025/10.1101_2025.03.04.641540_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.05.641737_v1,10.1101/2025.03.05.641737,Amino acids bind to phase-separating proteins and modulate biomolecular condensate stability and dynamics,v1,2025-03-05,Biophysics,Nature Communications,10.1038/s41467-025-63755-x,2025-09-30,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.05.641737_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.07.641980_v1,10.1101/2025.03.07.641980,Electrostatic properties of disordered regions control transcription factor search and pioneer activity,v1,2025-03-07,Biophysics,Nature Communications,10.1038/s41467-026-69284-5,2026-02-08,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.07.641980_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.07.642097_v1,10.1101/2025.03.07.642097,DNA polymerase actively and sequentially displaces single-stranded DNA-binding proteins,v1,2025-03-07,Biophysics,Nature Communications,10.1038/s41467-025-62531-1,2025-08-12,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.07.642097_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.09.642144_v3,10.1101/2025.03.09.642144,Fluorescence-based mapping of condensate dielectric permittivity uncovers hydrophobicity-driven membrane interactions,v3,2025-03-09,Biophysics,Nature Communications,10.1038/s41467-026-71273-7,2026-03-31,71,4.761,14.63,extracted_data/January_2026/10.1101_2025.03.09.642144_v3.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.09.642189_v2,10.1101/2025.03.09.642189,Design of Tau Aggregation Inhibitors Using Iterative Machine Learning and a Polymorph-Specific Brain-Seeded Fibril Amplification Assay,v2,2025-03-09,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c12812,2025-10-01,55,5.554,15.01,extracted_data/March_2025/10.1101_2025.03.09.642189_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.10.642366_v1,10.1101/2025.03.10.642366,Foam film vitrification for cryo-EM,v1,2025-03-10,Biophysics,Nature Communications,10.1038/s41467-025-61270-7,2025-07-04,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.10.642366_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.13.643017_v4,10.1101/2025.03.13.643017,A Stochastic Mechanism Drives Fast Substrate Translocation in the AAA+ Machine ClpB,v4,2025-03-13,Biophysics,Nature Communications,10.1038/s41467-026-68478-1,2026-01-21,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.03.13.643017_v4.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.13.643154_v1,10.1101/2025.03.13.643154,"Ndc80 complex, a conserved coupler for kinetochore-microtubule motility, is a sliding molecular clutch",v1,2025-03-13,Biophysics,Science Advances,10.1126/sciadv.adx0005,2025-09-05,79,4.324,12.06,extracted_data/March_2025/10.1101_2025.03.13.643154_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.16.643529_v1,10.1101/2025.03.16.643529,A unifying model for microRNA-guided silencing of messenger RNAs,v1,2025-03-16,Biophysics,Nature Communications,10.1038/s41467-025-67186-6,2025-12-08,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.16.643529_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.17.643618_v1,10.1101/2025.03.17.643618,Deep Learning-Based High-Resolution Time Inference for Deciphering Dynamic Gene Regulation from Fixed Embryos,v1,2025-03-17,Biophysics,Nature Communications,10.1038/s41467-025-61907-7,2025-07-16,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.17.643618_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.17.643777_v1,10.1101/2025.03.17.643777,Closed State Structure of the Pore Revealed by Uncoupled Shaker K+ Channel,v1,2025-03-17,Biophysics,Nature Communications,10.1038/s41467-025-65124-0,2025-11-19,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.17.643777_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.18.643977_v2,10.1101/2025.03.18.643977,Decoupling Phase Separation and Fibrillization Preserves Activity of Biomolecular Condensates,v2,2025-03-18,Biophysics,Nature Communications,10.1038/s41467-026-69244-z,2026-02-16,71,4.761,14.63,extracted_data/November_2025/10.1101_2025.03.18.643977_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.25.645310_v1,10.1101/2025.03.25.645310,Lipid dependence of connexin-32 gap junction channel conformations,v1,2025-03-25,Biophysics,Nature Communications,10.1038/s41467-025-67004-z,2025-12-05,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.25.645310_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.26.645583_v1,10.1101/2025.03.26.645583,A High-Sensitivity Stopped-Flow EPR System to Monitor Millisecond Conformational Kinetics in Spin-Labeled Proteins,v1,2025-03-26,Biophysics,Protein Science,10.1002/pro.70214,2025-08,73,4.657,6.35,extracted_data/April_2025/10.1101_2025.03.26.645583_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.27.645769_v2,10.1101/2025.03.27.645769,Structural Insights into Kainate Receptor Desensitization,v2,2025-03-27,Biophysics,Nature Communications,10.1038/s41467-025-65920-8,2025-12-09,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.03.27.645769_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.27.645792_v2,10.1101/2025.03.27.645792,PCNA encircling primer/template junctions is eliminated by exchange of RPA for Rad51: Implications for the interplay between human DNA damage tolerance pathways,v2,2025-03-27,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf1478,2026-01-05,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.03.27.645792_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.03.31.646415_v1,10.1101/2025.03.31.646415,Structural defects in amyloid-β fibrils drive secondary nucleation,v1,2025-03-31,Biophysics,Nature Communications,10.1038/s41467-026-69377-1,2026-02-18,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.03.31.646415_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.01.646591_v2,10.1101/2025.04.01.646591,Real-time imaging of rotation during synthesis by the replisome,v2,2025-04-01,Biophysics,Science Advances,10.1126/sciadv.adx4089,2026-01-02,79,4.324,12.06,extracted_data/October_2025/10.1101_2025.04.01.646591_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.02.646878_v1,10.1101/2025.04.02.646878,Supervised learning of protein variant effects across large-scale mutagenesis datasets,v1,2025-04-02,Biophysics,Protein Science,10.1002/pro.70526,2026-04,73,4.657,6.35,extracted_data/April_2025/10.1101_2025.04.02.646878_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.07.647376_v2,10.1101/2025.04.07.647376,SpeedyTrack: Direct microsecond wide-field single-molecule tracking and super-resolution mapping via CCD vertical shift,v2,2025-04-07,Biophysics,Nature Communications,10.1038/s41467-025-65529-x,2025-11-25,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.04.07.647376_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.08.647786_v2,10.1101/2025.04.08.647786,Evaluating MINFLUX experimental performance in silico,v2,2025-04-08,Biophysics,Nature Communications,10.1038/s41467-025-66952-w,2025-12-06,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.04.08.647786_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.08.647894_v2,10.1101/2025.04.08.647894,Solid-state nanopore sensing reveals conformational changes induced by a mutation in a neuron-specific tRNAArg,v2,2025-04-08,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf1411,2026-01-14,34,7.776,16.90,extracted_data/November_2025/10.1101_2025.04.08.647894_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.09.647968_v2,10.1101/2025.04.09.647968,Histone H3 tail charge patterns govern nucleosome condensate formation and dynamics,v2,2025-04-09,Biophysics,Nucleic Acids Research,10.1093/nar/gkag050,2026-02-05,34,7.776,16.90,extracted_data/December_2025/10.1101_2025.04.09.647968_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.09.648002_v1,10.1101/2025.04.09.648002,Cotranslational Protein Folding Through Non-Native Structural Intermediates,v1,2025-04-09,Biophysics,Science Advances,10.1126/sciadv.ady2211,2025-09-05,79,4.324,12.06,extracted_data/April_2025/10.1101_2025.04.09.648002_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.10.648288_v1,10.1101/2025.04.10.648288,Drp1 Proteins Released from Hydrolysis-driven Scaffold Disassembly Trigger Nucleotide-dependent Membrane Remodeling to Promote Scission,v1,2025-04-10,Biophysics,Journal of the American Chemical Society,10.1021/jacs.4c15836,2025-07-16,55,5.554,15.01,extracted_data/April_2025/10.1101_2025.04.10.648288_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.23.650292_v1,10.1101/2025.04.23.650292,Complex cooperativity in DNA origami revealed via design dependent defectivity,v1,2025-04-23,Biophysics,Nucleic Acids Research,10.1093/nar/gkag052,2026-02-05,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.04.23.650292_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.25.649609_v1,10.1101/2025.04.25.649609,De novo Design of a Peptide Modulator to Reverse Sodium Channel Dysfunction Linked to Cardiac Arrhythmias and Epilepsy,v1,2025-04-25,Biophysics,Cell,10.1016/j.cell.2025.07.038,2025-10,3,22.612,30.22,extracted_data/April_2025/10.1101_2025.04.25.649609_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.28.650983_v1,10.1101/2025.04.28.650983,A Novel Model for Proton Transport Mediated by Uncoupling Protein 1,v1,2025-04-28,Biophysics,Protein Science,10.1002/pro.70357,2025-11,73,4.657,6.35,extracted_data/May_2025/10.1101_2025.04.28.650983_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.29.651239_v1,10.1101/2025.04.29.651239,DNA Actively Regulates the “Safety-Belt” Dynamics of Condensin during Loop Extrusion,v1,2025-04-29,Biophysics,Nature Communications,10.1038/s41467-025-68239-6,2026-01-07,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.04.29.651239_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.04.30.651372_v1,10.1101/2025.04.30.651372,Functional and Structural Characterization of F1-ATPase with common ancestral core domains in stator ring,v1,2025-04-30,Biophysics,Protein Science,10.1002/pro.70345,2025-11,73,4.657,6.35,extracted_data/May_2025/10.1101_2025.04.30.651372_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.01.641776_v1,10.1101/2025.05.01.641776,Saddle Curvature Association of nsP1 Facilitates the Replication Complex Assembly of Chikungunya Virus in Cells,v1,2025-05-01,Biophysics,Nature Communications,10.1038/s41467-025-59402-0,2025-05-08,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.01.641776_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.03.652001_v3,10.1101/2025.05.03.652001,Computational design of conformation-biasing mutations to alter protein functions,v3,2025-05-03,Biophysics,Science,10.1126/science.adv7953,2026-03-12,19,10.416,15.26,extracted_data/June_2025/10.1101_2025.05.03.652001_v3.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.07.652726_v1,10.1101/2025.05.07.652726,Structural basis for membrane microdomain formation by a human Stomatin complex,v1,2025-05-07,Biophysics,Nature Communications,10.1038/s41467-025-62859-8,2025-08-12,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.07.652726_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.08.652968_v2,10.1101/2025.05.08.652968,Molecular mechanism of exchange coupling in CLC chloride/proton antiporters,v2,2025-05-08,Biophysics,Nature Communications,10.1038/s41467-025-68098-1,2026-01-08,71,4.761,14.63,extracted_data/December_2025/10.1101_2025.05.08.652968_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.08.652980_v1,10.1101/2025.05.08.652980,Single-molecule Mechanostructural Fingerprinting of Nucleic Acid Conformations,v1,2025-05-08,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf1465,2026-01-05,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.08.652980_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.09.653034_v1,10.1101/2025.05.09.653034,Bottom-up investigation of spatiotemporal glycocalyx dynamics with interferometric scattering microscopy,v1,2025-05-09,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c08659,2025-09-10,55,5.554,15.01,extracted_data/May_2025/10.1101_2025.05.09.653034_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.10.651030_v1,10.1101/2025.05.10.651030,Quantitative analysis of inhibitor-induced assembly disruption in human UDP-GlcNAc 2-epimerase using mass photometry,v1,2025-05-10,Biophysics,Protein Science,10.1002/pro.70335,2025-11,73,4.657,6.35,extracted_data/May_2025/10.1101_2025.05.10.651030_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.10.653283_v2,10.1101/2025.05.10.653283,Structural Basis for Retron Co-option of Anti-phage ATPase-nuclease,v2,2025-05-10,Biophysics,Nature Structural & Molecular Biology,10.1038/s41594-025-01702-6,2026-01,48,6.187,6.42,extracted_data/May_2025/10.1101_2025.05.10.653283_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.10.653287_v1,10.1101/2025.05.10.653287,Conformational Dynamics in Insulin Receptor Kinase Reveals a Type III Allosteric Pocket,v1,2025-05-10,Biophysics,Protein Science,10.1002/pro.70455,2026-02,73,4.657,6.35,extracted_data/May_2025/10.1101_2025.05.10.653287_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.12.653420_v1,10.1101/2025.05.12.653420,Light-induced structural adaptation of the bundle-shaped phycobilisome from thylakoid-lacking cyanobacterium Gloeobacter violaceus,v1,2025-05-12,Biophysics,Nature Communications,10.1038/s41467-025-60673-w,2025-07-01,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.12.653420_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.13.653789_v1,10.1101/2025.05.13.653789,TRPM8 protein dynamics correlates with ligand structure and cellular function,v1,2025-05-13,Biophysics,Journal of the American Chemical Society,10.1021/jacs.4c09435,2025-06-04,55,5.554,15.01,extracted_data/May_2025/10.1101_2025.05.13.653789_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.14.653959_v1,10.1101/2025.05.14.653959,Energetic profiling reveals thermodynamic principles underlying amyloid fibril maturation,v1,2025-05-14,Biophysics,Nature Communications,10.1038/s41467-025-65035-0,2025-11-18,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.14.653959_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.19.654877_v1,10.1101/2025.05.19.654877,The cryo-EM structure of mouse radial spoke 3 reveals a unique metabolic and regulatory hub in cilia,v1,2025-05-19,Biophysics,Nature Structural & Molecular Biology,10.1038/s41594-025-01594-6,2025-08,48,6.187,6.42,extracted_data/May_2025/10.1101_2025.05.19.654877_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.22.652967_v1,10.1101/2025.05.22.652967,Non-Canonical RNA Binding of Human La-related Protein 6,v1,2025-05-22,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf682,2025-07-19,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.22.652967_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.05.22.655422_v1,10.1101/2025.05.22.655422,Molecular Basis of Sodium Channel Inactivation,v1,2025-05-22,Biophysics,Nature Communications,10.1038/s41467-025-65587-1,2025-11-26,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.22.655422_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.02.657082_v1,10.1101/2025.06.02.657082,"A High-Throughput, Flow Cytometry Approach to Measure Phase Behavior and Exchange in Biomolecular Condensates",v1,2025-06-02,Biophysics,Nature Communications,10.1038/s41467-025-68093-6,2026-01-15,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.02.657082_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.03.657582_v1,10.1101/2025.06.03.657582,Macrophage-derived reactive oxygen species promote Salmonella aggresome formation contributing to bacterial antibiotic persistence,v1,2025-06-03,Biophysics,iMeta,10.1002/imt2.70059,2025-08,47,6.223,22.73,extracted_data/June_2025/10.1101_2025.06.03.657582_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.04.656888_v1,10.1101/2025.06.04.656888,TORCphysics: A physical model of DNA-topology-controlled gene expression,v1,2025-06-04,Biophysics,Nucleic Acids Research,10.1093/nar/gkag126,2026-02-05,34,7.776,16.90,extracted_data/June_2025/10.1101_2025.06.04.656888_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.10.657059_v1,10.1101/2025.06.10.657059,Secondary structure transitions and dual PIP2 binding define cardiac KCNQ1-KCNE1 channel gating,v1,2025-06-10,Biophysics,Cell Research,10.1038/s41422-025-01182-9,2025-10-02,27,8.740,9.06,extracted_data/June_2025/10.1101_2025.06.10.657059_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.10.658899_v1,10.1101/2025.06.10.658899,Bringing the Genetically Minimal Cell to Life on a Computer in 4D,v1,2025-06-10,Biophysics,Cell,10.1016/j.cell.2026.02.009,2026-03,3,22.612,30.22,extracted_data/June_2025/10.1101_2025.06.10.658899_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.10.659001_v1,10.1101/2025.06.10.659001,"ParB C-terminal lysine residues are essential for dimerization, in vitro DNA sliding and in vivo function",v1,2025-06-10,Biophysics,Nucleic Acids Research,10.1093/nar/gkag202,2026-02-24,34,7.776,16.90,extracted_data/June_2025/10.1101_2025.06.10.659001_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.12.658902_v2,10.1101/2025.06.12.658902,The soluble state of the HIV-1 Vpu protein forms a complex with Ca2+-calmodulin,v2,2025-06-12,Biophysics,Protein Science,10.1002/pro.70487,2026-02,73,4.657,6.35,extracted_data/December_2025/10.1101_2025.06.12.658902_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.12.659183_v2,10.1101/2025.06.12.659183,Deciphering DEL Pocket Patterns through Contrastive Learning,v2,2025-06-12,Biophysics,Nature Communications,10.1038/s41467-026-69663-y,2026-02-16,71,4.761,14.63,extracted_data/November_2025/10.1101_2025.06.12.659183_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.13.659650_v1,10.1101/2025.06.13.659650,Mechanochemical feedback between confinement and actin crosslinking drives the shape dynamics of liquid-like droplets,v1,2025-06-13,Biophysics,Nature Communications,10.1038/s41467-026-69803-4,2026-02-23,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.13.659650_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.17.660127_v1,10.1101/2025.06.17.660127,Screening de. novo designed protein binders in unpurified lysate using flow induced dispersion analysis,v1,2025-06-17,Biophysics,Protein Science,10.1002/pro.70286,2025-10,73,4.657,6.35,extracted_data/June_2025/10.1101_2025.06.17.660127_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.19.660547_v1,10.1101/2025.06.19.660547,Transient binding facilitates super-resolution imaging of functional amyloid fibrils on living bacteria,v1,2025-06-19,Biophysics,Protein Science,10.1002/pro.70398,2026-01,73,4.657,6.35,extracted_data/June_2025/10.1101_2025.06.19.660547_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.23.661150_v1,10.1101/2025.06.23.661150,Human Protein Synthesis Requires aminoacyl-tRNA Pivoting During Proofreading,v1,2025-06-23,Biophysics,Nature Communications,10.1038/s41467-025-63617-6,2025-09-02,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.06.23.661150_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.24.661299_v1,10.1101/2025.06.24.661299,Cytoplasmic Fluidity and the Cold Life: Proteome Stability is Decoupled from Viability in Psychrophiles,v1,2025-06-24,Biophysics,Nature Communications,10.1038/s41467-025-65270-5,2025-11-24,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.24.661299_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.27.661892_v1,10.1101/2025.06.27.661892,Shaping the Glycan Landscape: Hidden relationships between linkage and ring distortions induced by carbohydrate-active enzymes,v1,2025-06-27,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c11504,2025-10-22,55,5.554,15.01,extracted_data/June_2025/10.1101_2025.06.27.661892_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.27.661897_v1,10.1101/2025.06.27.661897,Depletion of the protein hydration shell with increasing temperature observed by small-angle X-ray scattering and molecular simulations,v1,2025-06-27,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c13497,2025-12-24,55,5.554,15.01,extracted_data/July_2025/10.1101_2025.06.27.661897_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.06.29.662239_v1,10.1101/2025.06.29.662239,Structural and Functional Mechanisms Underlying Activation Gate Dynamics and IFM Motif Accessibility in Human Nav1.5,v1,2025-06-29,Biophysics,Nature Communications,10.1038/s41467-026-69672-x,2026-02-16,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.06.29.662239_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.07.03.663097_v1,10.1101/2025.07.03.663097,Direct from the Seed: An Atomic-Resolution Protein Structure by Ab Initio MicroED,v1,2025-07-03,Biophysics,Nature Communications,10.1038/s41467-026-69601-y,2026-02-14,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.03.663097_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.07.09.663713_v1,10.1101/2025.07.09.663713,Conformational plasticity of LptC regulates lipopolysaccharide transport by the LptB2FGC complex,v1,2025-07-09,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c11923,2025-10-01,55,5.554,15.01,extracted_data/July_2025/10.1101_2025.07.09.663713_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.07.20.665262_v1,10.1101/2025.07.20.665262,Charged Scanning Mutagenesis as a High Throughput Approach for Epitope Mapping,v1,2025-07-20,Biophysics,Protein Science,10.1002/pro.70433,2026-01,73,4.657,6.35,extracted_data/July_2025/10.1101_2025.07.20.665262_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.07.26.664997_v1,10.1101/2025.07.26.664997,TMEM63 proteins act as mechanically activated cholesterol modulated lipid scramblases contributing to membrane mechano-resilience,v1,2025-07-26,Biophysics,Nature Communications,10.1038/s41467-026-68919-x,2026-01-30,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.26.664997_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.08.08.669392_v1,10.1101/2025.08.08.669392,A non-catalytic role for RFC in PCNA-mediated processive DNA synthesis,v1,2025-08-08,Biophysics,Cell,10.1016/j.cell.2025.12.029,2026-02,3,22.612,30.22,extracted_data/August_2025/10.1101_2025.08.08.669392_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.08.11.669795_v1,10.1101/2025.08.11.669795,Glycopolymers stabilize protein folding and protein-protein interactions via enthalpic interactions,v1,2025-08-11,Biophysics,Protein Science,10.1002/pro.70403,2026-01,73,4.657,6.35,extracted_data/August_2025/10.1101_2025.08.11.669795_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.08.13.669063_v1,10.1101/2025.08.13.669063,Integrated structural dynamics uncover new modes of B12 photoreceptor activation,v1,2025-08-13,Biophysics,Nature,10.1038/s41586-025-10074-2,2026-02-26,7,18.288,18.47,extracted_data/August_2025/10.1101_2025.08.13.669063_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.08.14.670260_v1,10.1101/2025.08.14.670260,DynaRepo: The repository of macromolecular conformational dynamics,v1,2025-08-14,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf1130,2026-01-06,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.14.670260_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.08.14.670285_v1,10.1101/2025.08.14.670285,Atomistic Mechanism of Calcium-Mediated Inward Rectification of the MthK Potassium Channel by Solid-State NMR and MD Simulations,v1,2025-08-14,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c16155,2025-12-10,55,5.554,15.01,extracted_data/August_2025/10.1101_2025.08.14.670285_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.08.14.670404_v1,10.1101/2025.08.14.670404,DNA modulates structural transitions and oligomerization kinetics of the functional amyloid CRES,v1,2025-08-14,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c15348,2026-01-14,55,5.554,15.01,extracted_data/August_2025/10.1101_2025.08.14.670404_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.08.18.670816_v1,10.1101/2025.08.18.670816,Single-molecule localization microscopy reveals the molecular organization of endogenous membrane receptors,v1,2025-08-18,Biophysics,Science Advances,10.1126/sciadv.aea2310,2026-02-06,79,4.324,12.06,extracted_data/August_2025/10.1101_2025.08.18.670816_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.08.27.672390_v2,10.1101/2025.08.27.672390,Biomolecular phase boundaries are described by a solubility product that accounts for variable stoichiometry and soluble oligomers,v2,2025-08-27,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c16034,2025-12-10,55,5.554,15.01,extracted_data/October_2025/10.1101_2025.08.27.672390_v2.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.08.29.673134_v1,10.1101/2025.08.29.673134,Nucleosome unwrapping and PARP1 allostery drive affinities for chromatin and DNA breaks,v1,2025-08-29,Biophysics,Nature Communications,10.1038/s41467-025-67071-2,2025-12-08,71,4.761,14.63,extracted_data/September_2025/10.1101_2025.08.29.673134_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.08.31.673347_v3,10.1101/2025.08.31.673347,"Dps binds and protects DNA in starved Escherichia coli with minimal effect on chromosome accessibility, dynamics and organisation",v3,2025-08-31,Biophysics,Nucleic Acids Research,10.1093/nar/gkaf1463,2026-01-14,34,7.776,16.90,extracted_data/November_2025/10.1101_2025.08.31.673347_v3.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.09.02.673685_v1,10.1101/2025.09.02.673685,H+ ions and ATP reshape the conformational landscape of an RNA recognition motif and regulate its fibrillation,v1,2025-09-02,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c15374,2026-01-21,55,5.554,15.01,extracted_data/September_2025/10.1101_2025.09.02.673685_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.09.10.675278_v1,10.1101/2025.09.10.675278,The role of intrinsically disordered domains in regulating G protein coupled receptor signaling,v1,2025-09-10,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c17796,2026-01-14,55,5.554,15.01,extracted_data/September_2025/10.1101_2025.09.10.675278_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.09.16.676619_v1,10.1101/2025.09.16.676619,Structural Heterogeneity of the Membrane-Interacting Region of the HIV-1 Envelope Glycoprotein,v1,2025-09-16,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c15421,2025-12-10,55,5.554,15.01,extracted_data/September_2025/10.1101_2025.09.16.676619_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.09.18.676892_v1,10.1101/2025.09.18.676892,A fold switch regulates conformation of an alphavirus virus RNA-dependent RNA polymerase,v1,2025-09-18,Biophysics,Nucleic Acids Research,10.1093/nar/gkag029,2026-01-14,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.18.676892_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.09.22.677830_v1,10.1101/2025.09.22.677830,Stabilization versus flexibility: detergent-dependent trade-offs in neurotensin receptor 1 GPCR ensembles,v1,2025-09-22,Biophysics,Protein Science,10.1002/pro.70475,2026-02,73,4.657,6.35,extracted_data/September_2025/10.1101_2025.09.22.677830_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.10.01.679710_v1,10.1101/2025.10.01.679710,"Single-array measurements reveal non-uniform, mosaic-like chemosensory arrays in bacteria",v1,2025-10-01,Biophysics,Nature Communications,10.1038/s41467-025-67285-4,2025-12-14,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.10.01.679710_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.10.10.681607_v1,10.1101/2025.10.10.681607,Multiplexed analysis of multicomponent biomolecular condensates without any tag,v1,2025-10-10,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c14476,2025-12-24,55,5.554,15.01,extracted_data/October_2025/10.1101_2025.10.10.681607_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.10.23.683552_v1,10.1101/2025.10.23.683552,The Dark Side of Biomolecular Condensates: Quantifying the Role of Nucleic Acids,v1,2025-10-23,Biophysics,Nucleic Acids Research,10.1093/nar/gkag253,2026-03-19,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.10.23.683552_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.10.23.684182_v1,10.1101/2025.10.23.684182,Functional characterization of dynamic nascent RNA folding ensembles in real-time,v1,2025-10-23,Biophysics,Science Advances,10.1126/sciadv.aec4037,2026-03-20,79,4.324,12.06,extracted_data/October_2025/10.1101_2025.10.23.684182_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.10.30.685619_v1,10.1101/2025.10.30.685619,The secreted staphylococcal biofilm protein Sbp forms biomolecular condensates in the presence of DNA,v1,2025-10-30,Biophysics,Protein Science,10.1002/pro.70485,2026-02,73,4.657,6.35,extracted_data/November_2025/10.1101_2025.10.30.685619_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.11.12.687956_v1,10.1101/2025.11.12.687956,Terminal conjugation enables nanopore sequencing of peptides,v1,2025-11-12,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c18813,2026-01-28,55,5.554,15.01,extracted_data/November_2025/10.1101_2025.11.12.687956_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.11.20.688880_v1,10.1101/2025.11.20.688880,Environmental dipolar relaxation during excited state proton transfer in Green Fluorescent Protein,v1,2025-11-20,Biophysics,Journal of the American Chemical Society,10.1021/jacs.5c21097,2026-02-25,55,5.554,15.01,extracted_data/November_2025/10.1101_2025.11.20.688880_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.1101_2025.11.26.690716_v1,10.1101/2025.11.26.690716,Intermediate heterogeneity modulates coupling between chain compaction and structure formation during protein folding,v1,2025-11-26,Biophysics,Protein Science,10.1002/pro.70512,2026-03,73,4.657,6.35,extracted_data/November_2025/10.1101_2025.11.26.690716_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.64898_2025.12.18.695269_v1,10.64898/2025.12.18.695269,Structural Basis of TACO1-Mediated Efficient Mitochondrial Translation,v1,2025-12-18,Biophysics,Nature Communications,10.1038/s41467-026-69156-y,2026-02-09,71,4.761,14.63,extracted_data/December_2025/10.64898_2025.12.18.695269_v1.xml,top100_bgm_multi_journals.csv
biophysics,10.64898_2026.01.19.700320_v1,10.64898/2026.01.19.700320,La protein binding to telomerase RNA supports an evolutionary relationship between plant and ciliate telomerase pathways,v1,2026-01-19,Biophysics,Nucleic Acids Research,10.1093/nar/gkag216,2026-02-24,34,7.776,16.90,extracted_data/January_2026/10.64898_2026.01.19.700320_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.10.01.616077_v1,10.1101/2024.10.01.616077,Regulatory T cells crosstalk with tumor and endothelium through lymphotoxin signaling,v1,2024-10-01,Cancer Biology,Nature Communications,10.1038/s41467-024-54874-y,2024-12-02,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.01.616077_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.10.03.616503_v1,10.1101/2024.10.03.616503,Patient-derived glioblastoma organoids as real-time avatars for assessing responses to clinical CAR-T cell therapy,v1,2024-10-03,Cancer Biology,Cell Stem Cell,10.1016/j.stem.2024.11.010,2025-02,23,9.313,12.67,extracted_data/October_2024/10.1101_2024.10.03.616503_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.10.09.617077_v1,10.1101/2024.10.09.617077,"Identification of DLK1, a Notch ligand, as an immunotherapeutic target and regulator of tumor cell plasticity and chemoresistance in adrenocortical carcinoma",v1,2024-10-09,Cancer Biology,Nature Communications,10.1038/s41467-025-60649-w,2025-07-01,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.09.617077_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.10.17.618976_v1,10.1101/2024.10.17.618976,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation,v1,2024-10-17,Cancer Biology,Science,10.1126/science.adt0559,2026-01-08,19,10.416,15.26,extracted_data/October_2024/10.1101_2024.10.17.618976_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.10.22.619358_v1,10.1101/2024.10.22.619358,Angiogenic and Immune Predictors of Neoadjuvant Axitinib Response in Renal Cell Carcinoma with Venous Tumour Thrombus,v1,2024-10-22,Cancer Biology,Nature Communications,10.1038/s41467-025-58436-8,2025-04-28,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.22.619358_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.10.26.620414_v1,10.1101/2024.10.26.620414,DNA methylation memory of pancreatic acinar-ductal metaplasia transition state altering Kras-downstream PI3K and Rho GTPase signaling in the absence of Kras mutation,v1,2024-10-26,Cancer Biology,Genome Medicine,10.1186/s13073-025-01452-6,2025-03-28,64,5.078,10.74,extracted_data/October_2024/10.1101_2024.10.26.620414_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.06.622320_v1,10.1101/2024.11.06.622320,Topoisomerase IIb binding underlies frequently mutated elements in cancer genomes,v1,2024-11-06,Cancer Biology,Nature Communications,10.1038/s41467-025-65005-6,2025-11-21,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.06.622320_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.11.622104_v1,10.1101/2024.11.11.622104,Targeting synthetic lethality between non-homologous end joining and radiation in very high-risk SHH medulloblastoma,v1,2024-11-11,Cancer Biology,Cell Reports Medicine,10.1016/j.xcrm.2025.102202,2025-07,92,4.028,8.08,extracted_data/November_2024/10.1101_2024.11.11.622104_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.11.622870_v1,10.1101/2024.11.11.622870,Live-cell magnetic micromanipulation of recycling endosomes reveals their direct effect on actin-based protrusions to promote invasive migration,v1,2024-11-11,Cancer Biology,Science Advances,10.1126/sciadv.adu6361,2025-07-04,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.11.622870_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.13.623500_v1,10.1101/2024.11.13.623500,Basal cell of origin resolves neuroendocrine–tuft lineage plasticity in cancer,v1,2024-11-13,Cancer Biology,Nature,10.1038/s41586-025-09503-z,2025-11-06,7,18.288,18.47,extracted_data/November_2024/10.1101_2024.11.13.623500_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.15.623232_v1,10.1101/2024.11.15.623232,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches,v1,2024-11-15,Cancer Biology,Cancer Cell,10.1016/j.ccell.2025.09.001,2025-12,4,19.027,24.69,extracted_data/November_2024/10.1101_2024.11.15.623232_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.15.623798_v1,10.1101/2024.11.15.623798,Deletion of epithelial HKDC1 decelerates cellular proliferation and impairs mitochondrial function of tumorous epithelial cells thereby protecting from intestinal carcinogenesis in mice,v1,2024-11-15,Cancer Biology,Cancer Communications,10.1002/cac2.70022,2025-07,45,6.403,12.32,extracted_data/November_2024/10.1101_2024.11.15.623798_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.17.619539_v1,10.1101/2024.11.17.619539,Engineered paediatric tumours retain maintains tumour genotype and phenotype for precision medicine,v1,2024-11-17,Cancer Biology,Molecular Systems Biology,10.1038/s44320-025-00152-y,2025-10-01,70,4.783,7.15,extracted_data/November_2024/10.1101_2024.11.17.619539_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.18.624112_v1,10.1101/2024.11.18.624112,Single cell analysis of Barrett’s esophagus and carcinoma reveals cell types conferring risk via genetic predisposition,v1,2024-11-18,Cancer Biology,Cell Genomics,10.1016/j.xgen.2025.100980,2025-10,46,6.238,7.85,extracted_data/November_2024/10.1101_2024.11.18.624112_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.21.624591_v2,10.1101/2024.11.21.624591,Coordinated protein modules define DNA damage responses to carboplatin at single cell resolution in human ovarian carcinoma models,v2,2024-11-21,Cancer Biology,Cell Reports Medicine,10.1016/j.xcrm.2025.102295,2025-09,92,4.028,8.08,extracted_data/November_2024/10.1101_2024.11.21.624591_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.22.624844_v2,10.1101/2024.11.22.624844,Multimetric MRI Captures Early Response and Acquired Resistance of Pancreatic Cancer to KRAS Inhibitor Therapy,v2,2024-11-22,Cancer Biology,Clinical Cancer Research,10.1158/1078-0432.CCR-24-4049,2025-07-01,69,4.800,8.53,extracted_data/April_2025/10.1101_2024.11.22.624844_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.28.625663_v1,10.1101/2024.11.28.625663,HIFα isoform specific activities drive cell-type specificity of VHL-associated oncogenesis,v1,2024-11-28,Cancer Biology,Nature Communications,10.1038/s41467-025-64214-3,2025-10-16,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.11.28.625663_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.11.29.625909_v3,10.1101/2024.11.29.625909,Leukemia-mutated proteins PHF6 and PHIP form a chromatin complex that represses acute myeloid leukemia stemness,v3,2024-11-29,Cancer Biology,Genes & Development,10.1101/gad.352602.125,2025-07-28,96,4.005,4.89,extracted_data/January_2025/10.1101_2024.11.29.625909_v3.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.02.626426_v1,10.1101/2024.12.02.626426,"IFNγ-dependent metabolic reprogramming restrains an immature, pro-metastatic lymphatic state in melanoma",v1,2024-12-02,Cancer Biology,Cancer Cell,10.1016/j.ccell.2025.12.019,2026-04,4,19.027,24.69,extracted_data/December_2024/10.1101_2024.12.02.626426_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.04.626816_v1,10.1101/2024.12.04.626816,Epigenetic remodeling and 3D chromatin reorganization governed by NKX2-1 drive neuroendocrine prostate cancer,v1,2024-12-04,Cancer Biology,Nature Genetics,10.1038/s41588-025-02265-4,2025-08,9,16.586,16.08,extracted_data/December_2024/10.1101_2024.12.04.626816_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.08.627394_v1,10.1101/2024.12.08.627394,Enhancer heterogeneity in acute lymphoblastic leukemia drives differential gene expression between patients,v1,2024-12-08,Cancer Biology,Blood,10.1182/blood.2024028019,2025-10-23,51,5.823,7.31,extracted_data/December_2024/10.1101_2024.12.08.627394_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.12.628228_v1,10.1101/2024.12.12.628228,DKC1-mediated pseudouridylation of rRNA targets hnRNP A1 to sustain IRES-dependent translation and ATF4-driven metabolic adaptation,v1,2024-12-12,Cancer Biology,Science Advances,10.1126/sciadv.adv9401,2025-08-29,79,4.324,12.06,extracted_data/December_2024/10.1101_2024.12.12.628228_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.12.628246_v2,10.1101/2024.12.12.628246,Adaptation to cystine limitation stress confers a targetable lipid metabolism vulnerability in pancreatic ductal adenocarcinoma,v2,2024-12-12,Cancer Biology,Nature Communications,10.1038/s41467-025-68099-0,2025-12-31,71,4.761,14.63,extracted_data/October_2025/10.1101_2024.12.12.628246_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.13.628239_v1,10.1101/2024.12.13.628239,Multiplexed mosaic tumor models reveal natural phenotypic variations in drug response within and between populations,v1,2024-12-13,Cancer Biology,Nature Cancer,10.1038/s43018-026-01130-5,2026-02-24,17,11.941,14.28,extracted_data/December_2024/10.1101_2024.12.13.628239_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.15.628103_v1,10.1101/2024.12.15.628103,Predictive value of preclinical models for CAR-T cell therapy clinical trials: a systematic review and meta-analysis,v1,2024-12-15,Cancer Biology,Journal for ImmunoTherapy of Cancer,10.1136/jitc-2025-011698,2025-06,84,4.220,9.10,extracted_data/December_2024/10.1101_2024.12.15.628103_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.17.629001_v2,10.1101/2024.12.17.629001,Covalent inhibitors of the RAS binding domain of PI3Kα impair tumor growth driven by RAS and HER2,v2,2024-12-17,Cancer Biology,Science,10.1126/science.adv2684,2025-11-13,19,10.416,15.26,extracted_data/December_2024/10.1101_2024.12.17.629001_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.21.629902_v1,10.1101/2024.12.21.629902,Leukemia escapes immunity by imposing a Type-1 regulatory program on neoantigen-specific CD4+ T cells,v1,2024-12-21,Cancer Biology,Blood,10.1182/blood.2024028194,2025-12-04,51,5.823,7.31,extracted_data/January_2025/10.1101_2024.12.21.629902_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.21.629908_v1,10.1101/2024.12.21.629908,Parp7 generates an ADP-ribosyl degron that controls negative feedback of androgen signaling,v1,2024-12-21,Cancer Biology,The EMBO Journal,10.1038/s44318-025-00510-4,2025-07-18,68,4.821,7.14,extracted_data/January_2025/10.1101_2024.12.21.629908_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.26.630430_v1,10.1101/2024.12.26.630430,Priming versus propagating: distinct immune effects of an alpha- versus beta-particle emitting radiopharmaceutical when combined with immune checkpoint inhibition,v1,2024-12-26,Cancer Biology,Nature Communications,10.1038/s41467-026-68834-1,2026-01-26,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.26.630430_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.30.630680_v1,10.1101/2024.12.30.630680,CEBPA repression by MECOM blocks differentiation to drive aggressive leukemias,v1,2024-12-30,Cancer Biology,Blood,10.1182/blood.2025028954,2025-12-18,51,5.823,7.31,extracted_data/December_2024/10.1101_2024.12.30.630680_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2024.12.30.630700_v1,10.1101/2024.12.30.630700,Rapid clonal selection within early hematopoietic cell compartments presages outcome to ivosidenib combination therapy,v1,2024-12-30,Cancer Biology,Blood,10.1182/blood.2024027948,2026-02-05,51,5.823,7.31,extracted_data/January_2025/10.1101_2024.12.30.630700_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.02.631046_v1,10.1101/2025.01.02.631046,MECOM is a master repressor of myeloid differentiation through dose control of CEBPA in acute myeloid leukemia,v1,2025-01-02,Cancer Biology,Blood,10.1182/blood.2025028914,2025-12-18,51,5.823,7.31,extracted_data/January_2025/10.1101_2025.01.02.631046_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.06.631591_v1,10.1101/2025.01.06.631591,Histone methyltransferase PRDM9 promotes survival of drug-tolerant persister cells in glioblastoma,v1,2025-01-06,Cancer Biology,Nature Communications,10.1038/s41467-025-65888-5,2025-12-15,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.06.631591_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.08.631877_v1,10.1101/2025.01.08.631877,Dual Ribosome Profiling reveals metabolic limitations of cancer and stromal cells in the tumor microenvironment,v1,2025-01-08,Cancer Biology,Nature Communications,10.1038/s41467-025-59986-7,2025-05-19,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.08.631877_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.08.631915_v1,10.1101/2025.01.08.631915,Upstream open reading frame translation enhances immunogenic peptide presentation in mitotically arrested cancer cells,v1,2025-01-08,Cancer Biology,Nature Communications,10.1038/s41467-025-63405-2,2025-08-27,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.08.631915_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.10.631286_v1,10.1101/2025.01.10.631286,The extracellular matrix drives guanylate production and protects pancreatic cancer cells from oxaliplatin-induced DNA damage,v1,2025-01-10,Cancer Biology,Science Advances,10.1126/sciadv.adu2276,2025-12-12,79,4.324,12.06,extracted_data/January_2025/10.1101_2025.01.10.631286_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.17.633627_v1,10.1101/2025.01.17.633627,HPV integration in head and neck cancer: downstream splicing events and expression ratios linked with poor outcomes,v1,2025-01-17,Cancer Biology,Clinical Cancer Research,10.1158/1078-0432.CCR-25-0645,2026-02-04,69,4.800,8.53,extracted_data/January_2025/10.1101_2025.01.17.633627_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.18.633736_v2,10.1101/2025.01.18.633736,SCAN-ACT: Adoptive T Cell Therapy Target Discovery Through Single-Cell Transcriptomics,v2,2025-01-18,Cancer Biology,Genome Medicine,10.1186/s13073-025-01514-9,2025-08-14,64,5.078,10.74,extracted_data/January_2025/10.1101_2025.01.18.633736_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.23.634500_v2,10.1101/2025.01.23.634500,CD33KO-CD33-mesothelin loop CAR design avoids fratricide and improves efficacy of iNK cells against acute myeloid leukemia,v2,2025-01-23,Cancer Biology,Journal for ImmunoTherapy of Cancer,10.1136/jitc-2025-011887,2025-09,84,4.220,9.10,extracted_data/February_2025/10.1101_2025.01.23.634500_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.23.634502_v2,10.1101/2025.01.23.634502,SOX2 empowers a rapid tumorigenic programme from the tumour-resistant population in the skin,v2,2025-01-23,Cancer Biology,Nature Communications,10.1038/s41467-025-66251-4,2026-01-08,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.01.23.634502_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.23.634617_v1,10.1101/2025.01.23.634617,Engineered CRO-CD7 CAR-NK cells derived from pluripotent stem cells avoid fratricide and efficiently suppress human T-cell malignancies,v1,2025-01-23,Cancer Biology,Journal of Hematology & Oncology,10.1186/s13045-025-01712-3,2025-05-19,20,10.192,26.08,extracted_data/January_2025/10.1101_2025.01.23.634617_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.24.631210_v1,10.1101/2025.01.24.631210,Genome-scale spatial mapping of the Hodgkin lymphoma microenvironment identifies tumor cell survival factors,v1,2025-01-24,Cancer Biology,Nature Communications,10.1038/s41467-025-67539-1,2025-12-20,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.24.631210_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.24.634753_v1,10.1101/2025.01.24.634753,Single Cell Spatial Transcriptomics Reveals Immunotherapy-Driven Bone Marrow Niche Remodeling in AML,v1,2025-01-24,Cancer Biology,Science Advances,10.1126/sciadv.adw4871,2025-07-11,79,4.324,12.06,extracted_data/January_2025/10.1101_2025.01.24.634753_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.28.635346_v1,10.1101/2025.01.28.635346,Overcoming Immune Checkpoint Inhibitor Resistance via Potent and Selective Dual αvβ6/8 Inhibitors Based on Engineered Lasso Peptides,v1,2025-01-28,Cancer Biology,Journal of the American Chemical Society,10.1021/jacs.5c06142,2025-09-10,55,5.554,15.01,extracted_data/February_2025/10.1101_2025.01.28.635346_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.29.635445_v1,10.1101/2025.01.29.635445,c-Rel drives pancreatic cancer metastasis through Fibronectin-Integrin signaling-induced isolation stress resistance and EMT activation,v1,2025-01-29,Cancer Biology,Molecular Cancer,10.1186/s12943-025-02486-5,2025-12-15,24,9.263,30.30,extracted_data/February_2025/10.1101_2025.01.29.635445_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.01.31.635832_v1,10.1101/2025.01.31.635832,"Spatial profiling of longitudinal glioblastoma reveals consistent changes in cellular architecture, post-treatment",v1,2025-01-31,Cancer Biology,Neuro-Oncology,10.1093/neuonc/noaf190,2025-12-01,39,6.974,8.79,extracted_data/February_2025/10.1101_2025.01.31.635832_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.02.01.636064_v2,10.1101/2025.02.01.636064,Reconstructing the three-dimensional architecture of extrachromosomal DNA with ec3D,v2,2025-02-01,Cancer Biology,Nature Communications,10.1038/s41467-025-67614-7,2025-12-20,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.02.01.636064_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.02.03.636201_v1,10.1101/2025.02.03.636201,Systematic identification of regions where DNA methylation is correlated with transcription refines regulatory logic in normal and tumour tissues,v1,2025-02-03,Cancer Biology,Nucleic Acids Research,10.1093/nar/gkaf949,2025-09-23,34,7.776,16.90,extracted_data/February_2025/10.1101_2025.02.03.636201_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.02.03.636222_v1,10.1101/2025.02.03.636222,Vertical RAS-pathway inhibition in pancreatic cancer drives therapeutically exploitable mitochondrial alterations,v1,2025-02-03,Cancer Biology,Signal Transduction and Targeted Therapy,10.1038/s41392-025-02563-7,2026-01-16,15,12.135,29.10,extracted_data/February_2025/10.1101_2025.02.03.636222_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.02.06.636643_v1,10.1101/2025.02.06.636643,Targeting FGFR4 Abrogates HNF1A-driven Metastasis in Pancreatic Ductal Adenocarcinoma,v1,2025-02-06,Cancer Biology,Molecular Cancer,10.1186/s12943-025-02408-5,2025-07-29,24,9.263,30.30,extracted_data/February_2025/10.1101_2025.02.06.636643_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.02.07.636864_v1,10.1101/2025.02.07.636864,Seven blood biomarkers are associated with TGF-β and VHL-HIF signaling in patients with clear cell renal cell carcinoma,v1,2025-02-07,Cancer Biology,Signal Transduction and Targeted Therapy,10.1038/s41392-025-02404-7,2025-09-26,15,12.135,29.10,extracted_data/February_2025/10.1101_2025.02.07.636864_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.02.07.637120_v1,10.1101/2025.02.07.637120,Hexokinase detachment from mitochondria drives the Warburg effect to support compartmentalized ATP production,v1,2025-02-07,Cancer Biology,Nature Metabolism,10.1038/s42255-025-01428-1,2026-01-16,36,7.529,11.55,extracted_data/February_2025/10.1101_2025.02.07.637120_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.02.12.637117_v1,10.1101/2025.02.12.637117,Covalent Destabilizing Degrader of AR and AR-V7 in Androgen-Independent Prostate Cancer Cells,v1,2025-02-12,Cancer Biology,Journal of the American Chemical Society,10.1021/jacs.5c02801,2025-06-18,55,5.554,15.01,extracted_data/February_2025/10.1101_2025.02.12.637117_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.02.19.638991_v1,10.1101/2025.02.19.638991,RBM15-MKL1 fusion protein promotes leukemia via m6A methylation and WNT pathway activation,v1,2025-02-19,Cancer Biology,Blood,10.1182/blood.2024027712,2025-08-28,51,5.823,7.31,extracted_data/February_2025/10.1101_2025.02.19.638991_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.02.23.639782_v3,10.1101/2025.02.23.639782,RAB1A is a novel vulnerability in uveal melanoma revealed by dual inhibition of MNK1/2 and mTOR,v3,2025-02-23,Cancer Biology,Cell Death & Differentiation,10.1038/s41418-026-01684-y,2026-02-18,67,4.866,14.45,extracted_data/April_2025/10.1101_2025.02.23.639782_v3.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.04.641492_v2,10.1101/2025.03.04.641492,Drug tolerant persisters and immunotherapy persister cells exhibit cross-resistance and share common survival mechanisms,v2,2025-03-04,Cancer Biology,Cell Death & Differentiation,10.1038/s41418-025-01656-8,2025-12-26,67,4.866,14.45,extracted_data/December_2025/10.1101_2025.03.04.641492_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.04.641494_v1,10.1101/2025.03.04.641494,Inhibiting B-cell-mediated Immunosuppression to Enhance the Immunotherapy Efficacy in Hepatocellular Carcinoma,v1,2025-03-04,Cancer Biology,Nature Communications,10.1038/s41467-025-66581-3,2025-12-08,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.04.641494_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.05.641733_v1,10.1101/2025.03.05.641733,Pan-cancer spatial characterization of key immune biomarkers in the tumor microenvironment,v1,2025-03-05,Cancer Biology,Cell Reports Medicine,10.1016/j.xcrm.2025.102418,2025-10,92,4.028,8.08,extracted_data/March_2025/10.1101_2025.03.05.641733_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.07.642090_v3,10.1101/2025.03.07.642090,Shared PRAME Epitopes are T-Cell Targets in NUT Carcinoma,v3,2025-03-07,Cancer Biology,Journal for ImmunoTherapy of Cancer,10.1136/jitc-2025-013539,2026-02,84,4.220,9.10,extracted_data/November_2025/10.1101_2025.03.07.642090_v3.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.07.642107_v1,10.1101/2025.03.07.642107,Tumor cell villages define the co-dependency of tumor and microenvironment in liver cancer,v1,2025-03-07,Cancer Biology,Nature Communications,10.1038/s41467-026-69797-z,2026-02-21,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.07.642107_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.11.642396_v3,10.1101/2025.03.11.642396,"The Origin, Diagnosis, and Prognosis of Oligomannose-Type Diffuse Large B-Cell Lymphoma",v3,2025-03-11,Cancer Biology,Blood,10.1182/blood.2025029163,2025-12-04,51,5.823,7.31,extracted_data/March_2025/10.1101_2025.03.11.642396_v3.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.12.642624_v2,10.1101/2025.03.12.642624,Multi-omic landscape of human gliomas from diagnosis to treatment and recurrence,v2,2025-03-12,Cancer Biology,Cancer Cell,10.1016/j.ccell.2025.11.006,2026-01,4,19.027,24.69,extracted_data/April_2025/10.1101_2025.03.12.642624_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.12.642754_v2,10.1101/2025.03.12.642754,WEE1 inhibitors trigger GCN2-mediated activation of the integrated stress response,v2,2025-03-12,Cancer Biology,Nature Communications,10.1038/s41467-025-66514-0,2025-11-24,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.03.12.642754_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.12.642825_v1,10.1101/2025.03.12.642825,WEE1 inhibitors synergise with mRNA translation defects via activation of the kinase GCN2,v1,2025-03-12,Cancer Biology,Nature Communications,10.1038/s41467-025-64050-5,2025-10-09,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.12.642825_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.15.642920_v1,10.1101/2025.03.15.642920,Differential Phagocytosis induces Diverse Macrophage Activation States in Malignant Gliomas,v1,2025-03-15,Cancer Biology,Journal for ImmunoTherapy of Cancer,10.1136/jitc-2025-012211,2025-09,84,4.220,9.10,extracted_data/March_2025/10.1101_2025.03.15.642920_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.24.644918_v1,10.1101/2025.03.24.644918,Dysproteostasis primes pancreatic epithelial state changes in KRAS-mediated oncogenesis,v1,2025-03-24,Cancer Biology,Developmental Cell,10.1016/j.devcel.2025.07.016,2025-12,62,5.180,7.30,extracted_data/March_2025/10.1101_2025.03.24.644918_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.03.26.645251_v1,10.1101/2025.03.26.645251,Quantitative measurement of phenotype dynamics during cancer drug resistance evolution using genetic barcoding,v1,2025-03-26,Cancer Biology,Nature Communications,10.1038/s41467-025-59479-7,2025-06-20,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.26.645251_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.04.07.646548_v1,10.1101/2025.04.07.646548,IFI16 senses and protects stalled replication forks,v1,2025-04-07,Cancer Biology,Molecular Cell,10.1016/j.molcel.2025.12.024,2026-01,26,9.051,12.04,extracted_data/April_2025/10.1101_2025.04.07.646548_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.04.14.648723_v2,10.1101/2025.04.14.648723,Small Extracellular Vesicles from Radioresistant H3K27M-Pediatric Diffuse Midline Glioma Cells Modulate Tumor Phenotypes and Radiation Response,v2,2025-04-14,Cancer Biology,Journal of Extracellular Vesicles,10.1002/jev2.70188,2025-11,75,4.524,13.60,extracted_data/June_2025/10.1101_2025.04.14.648723_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.04.15.648737_v1,10.1101/2025.04.15.648737,CRISPR screens in the context of immune selection identify CHD1 and MAP3K7 as mediators of cancer immunotherapy resistance,v1,2025-04-15,Cancer Biology,Cell Reports Medicine,10.1016/j.xcrm.2025.102565,2026-01,92,4.028,8.08,extracted_data/April_2025/10.1101_2025.04.15.648737_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.04.24.648993_v2,10.1101/2025.04.24.648993,TIGIT expression dictates the immunosuppressive reprogramming of myeloid cells in glioblastoma,v2,2025-04-24,Cancer Biology,Neuro-Oncology,10.1093/neuonc/noag044,2026-02-25,39,6.974,8.79,extracted_data/May_2025/10.1101_2025.04.24.648993_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.04.24.650284_v1,10.1101/2025.04.24.650284,The landscape of structural variation in pediatric cancer,v1,2025-04-24,Cancer Biology,Cancer Cell,10.1016/j.ccell.2026.02.012,2026-03,4,19.027,24.69,extracted_data/April_2025/10.1101_2025.04.24.650284_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.04.30.651522_v1,10.1101/2025.04.30.651522,Anti-CSF-1R therapy with combined immuno- chemotherapy coordinate an adaptive immune response to eliminate macrophage enriched Triple Negative Breast Cancers,v1,2025-04-30,Cancer Biology,Nature Communications,10.1038/s41467-025-67964-2,2026-01-03,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.04.30.651522_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.05.02.651820_v1,10.1101/2025.05.02.651820,Synergistic targeting of cancer cells through simultaneous inhibition of key metabolic enzymes,v1,2025-05-02,Cancer Biology,Cell Death & Differentiation,10.1038/s41418-025-01532-5,2025-12,67,4.866,14.45,extracted_data/May_2025/10.1101_2025.05.02.651820_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.05.06.652454_v1,10.1101/2025.05.06.652454,Chromosomal instability shapes the tumor microenvironment of esophageal adenocarcinoma via a cGAS–chemokine–myeloid axis,v1,2025-05-06,Cancer Biology,Science Advances,10.1126/sciadv.aeb1611,2026-03-13,79,4.324,12.06,extracted_data/May_2025/10.1101_2025.05.06.652454_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.05.12.652853_v1,10.1101/2025.05.12.652853,A recurrent pathogenic BRCA2 truncating variant reveals a role for BRCA2-PCAF complex in modulating NF-κB-driven transcription,v1,2025-05-12,Cancer Biology,Nature Communications,10.1038/s41467-025-67209-2,2025-12-10,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.12.652853_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.05.12.653427_v1,10.1101/2025.05.12.653427,Explainable Machine Learning Identifies Factors for Dosage Compensation in Aneuploid Human Cancer Cells,v1,2025-05-12,Cancer Biology,Molecular Systems Biology,10.1038/s44320-026-00187-9,2026-01-22,70,4.783,7.15,extracted_data/May_2025/10.1101_2025.05.12.653427_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.05.14.654046_v1,10.1101/2025.05.14.654046,Neural function of Netrin-1 in precancerous lesions of the pancreas,v1,2025-05-14,Cancer Biology,Nature Communications,10.1038/s41467-025-62299-4,2025-08-02,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.14.654046_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.05.15.654044_v1,10.1101/2025.05.15.654044,Drug and Single-Cell Gene Expression Integration Identifies Sensitive and Resistant Glioblastoma Cell Populations,v1,2025-05-15,Cancer Biology,Nature Communications,10.1038/s41467-025-67783-5,2026-01-07,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.15.654044_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.05.15.654308_v1,10.1101/2025.05.15.654308,Redirecting cytomegalovirus immunity against pancreas cancer for immunotherapy,v1,2025-05-15,Cancer Biology,Journal for ImmunoTherapy of Cancer,10.1136/jitc-2025-012969,2026-02,84,4.220,9.10,extracted_data/May_2025/10.1101_2025.05.15.654308_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.05.20.655210_v1,10.1101/2025.05.20.655210,Integrating Single-Cell Biophysical and Transcriptomic Features to Resolve Functional Heterogeneity in Mantle Cell Lymphoma,v1,2025-05-20,Cancer Biology,Science Advances,10.1126/sciadv.ady2963,2025-12-05,79,4.324,12.06,extracted_data/May_2025/10.1101_2025.05.20.655210_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.05.22.655519_v1,10.1101/2025.05.22.655519,Development of Paclitaxel Resistance in Triple-Negative Breast Cancer Is Associated with Extensive DNA Methylation Changes That Are Partially Reversed by Decitabine,v1,2025-05-22,Cancer Biology,Drug Resistance Updates,10.1016/j.drup.2026.101350,2026-03,61,5.282,21.83,extracted_data/May_2025/10.1101_2025.05.22.655519_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.05.29.656244_v2,10.1101/2025.05.29.656244,Genome-wide CRISPR screens identify PTGES3 as a novel AR modulator,v2,2025-05-29,Cancer Biology,Nature Genetics,10.1038/s41588-025-02388-8,2025-12,9,16.586,16.08,extracted_data/June_2025/10.1101_2025.05.29.656244_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.06.06.658309_v1,10.1101/2025.06.06.658309,Integrative analysis of mRNA stability regulation uncovers a metastasis-suppressive program in breast cancer,v1,2025-06-06,Cancer Biology,Science Advances,10.1126/sciadv.aea9061,2026-03-13,79,4.324,12.06,extracted_data/June_2025/10.1101_2025.06.06.658309_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.06.11.653876_v1,10.1101/2025.06.11.653876,Autocrine TGFβ2 enforces a transcriptionally hybrid cell state in Ewing sarcoma,v1,2025-06-11,Cancer Biology,Science Advances,10.1126/sciadv.ady0550,2026-01-23,79,4.324,12.06,extracted_data/June_2025/10.1101_2025.06.11.653876_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.06.11.659120_v1,10.1101/2025.06.11.659120,A Hotspot Phosphorylation Site on SHP2 Drives Oncoprotein Activation and Drug Resistance,v1,2025-06-11,Cancer Biology,Nature Communications,10.1038/s41467-026-70060-8,2026-03-03,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.11.659120_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.06.12.659267_v1,10.1101/2025.06.12.659267,Genetic barcoding uncovers the clonal makeup of solid and liquid biopsies and their ability to capture intra-tumoral heterogeneity,v1,2025-06-12,Cancer Biology,Molecular Systems Biology,10.1038/s44320-026-00194-w,2026-02-11,70,4.783,7.15,extracted_data/June_2025/10.1101_2025.06.12.659267_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.06.18.660406_v1,10.1101/2025.06.18.660406,Cetuximab increases LGR5 expression and augments LGR5-targeting antibody-drug conjugate efficacy in patient-derived colorectal cancer models,v1,2025-06-18,Cancer Biology,Cell Reports Medicine,10.1016/j.xcrm.2025.102363,2025-10,92,4.028,8.08,extracted_data/June_2025/10.1101_2025.06.18.660406_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.07.11.664267_v2,10.1101/2025.07.11.664267,A Paracrine-to-Autocrine Shunt of GREM1 Fuels Colorectal Cancer Metastasis via ACVR1C,v2,2025-07-11,Cancer Biology,Molecular Cancer,10.1186/s12943-025-02554-w,2026-01-24,24,9.263,30.30,extracted_data/July_2025/10.1101_2025.07.11.664267_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.07.22.666218_v1,10.1101/2025.07.22.666218,Capillary constrictions prime cancer cell tumorigenicity through PIEZO1,v1,2025-07-22,Cancer Biology,Nature Communications,10.1038/s41467-025-63374-6,2025-09-01,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.22.666218_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.07.29.667434_v1,10.1101/2025.07.29.667434,Therapeutic delivery of albumin-binding siRNA targeting IRS2 to diverse cell types reduces mammary tumor growth,v1,2025-07-29,Cancer Biology,Molecular Therapy,10.1016/j.ymthe.2026.01.033,2026-01,95,4.008,9.40,extracted_data/August_2025/10.1101_2025.07.29.667434_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.07.31.667906_v1,10.1101/2025.07.31.667906,Proteomic profiling of extracellular vesicles distinguishes prostate cancer molecular subtypes,v1,2025-07-31,Cancer Biology,Journal of Extracellular Vesicles,10.1002/jev2.70176,2025-10,75,4.524,13.60,extracted_data/August_2025/10.1101_2025.07.31.667906_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.08.07.668766_v2,10.1101/2025.08.07.668766,Targeting FSP1 triggers ferroptosis in lung cancer,v2,2025-08-07,Cancer Biology,Nature,10.1038/s41586-025-09710-8,2026-01-08,7,18.288,18.47,extracted_data/August_2025/10.1101_2025.08.07.668766_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.08.20.671322_v1,10.1101/2025.08.20.671322,FOXJ1 mediates taxane resistance through regulation of microtubule dynamics,v1,2025-08-20,Cancer Biology,Nature Communications,10.1038/s41467-026-69556-0,2026-02-14,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.08.20.671322_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.08.21.671520_v1,10.1101/2025.08.21.671520,FSP1 and histone deacetylases suppress cancer persister cell ferroptosis,v1,2025-08-21,Cancer Biology,Science Advances,10.1126/sciadv.aea8771,2026-01-02,79,4.324,12.06,extracted_data/August_2025/10.1101_2025.08.21.671520_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.09.01.673023_v1,10.1101/2025.09.01.673023,Preclinical efficacy of combinatorial B7-H3 CAR T cells and ONC206 against diffuse intrinsic pontine glioma,v1,2025-09-01,Cancer Biology,Neuro-Oncology,10.1093/neuonc/noag025,2026-02-04,39,6.974,8.79,extracted_data/September_2025/10.1101_2025.09.01.673023_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.09.05.674574_v1,10.1101/2025.09.05.674574,Hedgehog signaling drives glial cell plasticity and oncogenic reprogramming in gastroenteropancreatic neuroendocrine neoplasms,v1,2025-09-05,Cancer Biology,Molecular Cancer,10.1186/s12943-026-02611-y,2026-02-21,24,9.263,30.30,extracted_data/September_2025/10.1101_2025.09.05.674574_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.09.08.674484_v2,10.1101/2025.09.08.674484,Polyclonal origins of human premalignant colorectal lesions,v2,2025-09-08,Cancer Biology,Nature,10.1038/s41586-025-09930-y,2026-02-26,7,18.288,18.47,extracted_data/November_2025/10.1101_2025.09.08.674484_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.09.09.675147_v1,10.1101/2025.09.09.675147,HIF2-driven PTHrP Causes Cachexia and Hypercalcemia in Kidney Cancer: Treatment with HIF2 Inhibitors,v1,2025-09-09,Cancer Biology,Nature Medicine,10.1038/s41591-025-04054-2,2026-01,6,18.333,22.55,extracted_data/September_2025/10.1101_2025.09.09.675147_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.09.17.676669_v1,10.1101/2025.09.17.676669,Loss of the tumor suppressor PTEN activates cell-intrinsic interferon signaling to drive immune resistance,v1,2025-09-17,Cancer Biology,Genes & Development,10.1101/gad.353283.125,2026-02-18,96,4.005,4.89,extracted_data/September_2025/10.1101_2025.09.17.676669_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.09.17.676884_v1,10.1101/2025.09.17.676884,Overcoming impaired antigen presentation in tumor draining lymph nodes facilitates immunotherapy,v1,2025-09-17,Cancer Biology,Journal for ImmunoTherapy of Cancer,10.1136/jitc-2025-013364,2025-12,84,4.220,9.10,extracted_data/September_2025/10.1101_2025.09.17.676884_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.09.19.677259_v2,10.1101/2025.09.19.677259,RRAS and RRAS2 mutations are recurrent oncogenic drivers in lung cancer and are sensitive to the pan-RAS inhibitor RMC-6236,v2,2025-09-19,Cancer Biology,Clinical Cancer Research,10.1158/1078-0432.CCR-25-2734,2026-04-01,69,4.800,8.53,extracted_data/November_2025/10.1101_2025.09.19.677259_v2.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.09.24.677515_v1,10.1101/2025.09.24.677515,Harnessing the CD2 axis to broaden and enhance the efficacy of CAR T cell therapies,v1,2025-09-24,Cancer Biology,Blood,10.1182/blood.2025031409,2026-04-16,51,5.823,7.31,extracted_data/September_2025/10.1101_2025.09.24.677515_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.09.25.678693_v1,10.1101/2025.09.25.678693,ONC206 demonstrates potent anti-tumorigenic activity and is a potential novel therapeutic strategy for high-risk medulloblastoma,v1,2025-09-25,Cancer Biology,Neuro-Oncology,10.1093/neuonc/noag053,2026-03-12,39,6.974,8.79,extracted_data/September_2025/10.1101_2025.09.25.678693_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.10.03.680232_v1,10.1101/2025.10.03.680232,Functional interrogation uncovers a critical role for a high-plasticity cell state in lung adenocarcinoma,v1,2025-10-03,Cancer Biology,Nature,10.1038/s41586-025-09985-x,2026-03-05,7,18.288,18.47,extracted_data/October_2025/10.1101_2025.10.03.680232_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.10.10.681495_v1,10.1101/2025.10.10.681495,Genetic elements promote retention of extrachromosomal DNA in cancer cells,v1,2025-10-10,Cancer Biology,Nature,10.1038/s41586-025-09764-8,2026-01-01,7,18.288,18.47,extracted_data/October_2025/10.1101_2025.10.10.681495_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.10.10.681717_v1,10.1101/2025.10.10.681717,Lineage-determining transcription factors constrain cohesin to drive multi-enhancer oncogene regulation,v1,2025-10-10,Cancer Biology,Nature Cell Biology,10.1038/s41556-025-01827-2,2026-01,35,7.711,10.39,extracted_data/October_2025/10.1101_2025.10.10.681717_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.1101_2025.10.18.683203_v1,10.1101/2025.10.18.683203,Distinct tumor immune microenvironmental (TIME) landscapes drive divergent immunotherapy responses in glioblastoma,v1,2025-10-18,Cancer Biology,Neuro-Oncology,10.1093/neuonc/noag018,2026-01-31,39,6.974,8.79,extracted_data/October_2025/10.1101_2025.10.18.683203_v1.xml,top100_bgm_multi_journals.csv
cancer_biology,10.64898_2025.12.15.694282_v1,10.64898/2025.12.15.694282,De novo H3.3K27M-altered Diffuse Midline Glioma in human brainstem organoids to dissect GD2 CAR T cell function,v1,2025-12-15,Cancer Biology,Nature Cancer,10.1038/s43018-025-01084-0,2026-01-05,17,11.941,14.28,extracted_data/December_2025/10.64898_2025.12.15.694282_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.01.615642_v2,10.1101/2024.10.01.615642,The Spc105/Kre28 complex promotes mitotic error correction by outer kinetochore recruitment of Ipl1/Sli15,v2,2024-10-01,Cell Biology,The EMBO Journal,10.1038/s44318-025-00437-w,2025-04-25,68,4.821,7.14,extracted_data/April_2025/10.1101_2024.10.01.615642_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.02.616265_v1,10.1101/2024.10.02.616265,Allosteric regulation of BH3-in-groove interactions by tail anchors of BCL-xL complexes limits BH3 mimetic antagonism,v1,2024-10-02,Cell Biology,Nature Communications,10.1038/s41467-025-65509-1,2025-11-22,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.02.616265_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.05.616786_v1,10.1101/2024.10.05.616786,Conservation of mRNA operon formation in the control of the heat shock response in mammalian cells,v1,2024-10-05,Cell Biology,Science Advances,10.1126/sciadv.adu0315,2025-12-05,79,4.324,12.06,extracted_data/October_2024/10.1101_2024.10.05.616786_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.10.617378_v1,10.1101/2024.10.10.617378,The small GTPase Ran defines Nuclear Pore Complex Asymmetry,v1,2024-10-10,Cell Biology,Cell,10.1016/j.cell.2025.07.025,2025-10,3,22.612,30.22,extracted_data/October_2024/10.1101_2024.10.10.617378_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.10.617646_v1,10.1101/2024.10.10.617646,H2AK119ub dynamics controls hair follicle stem cell quiescence,v1,2024-10-10,Cell Biology,Nature Communications,10.1038/s41467-025-66471-8,2025-12-18,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.10.617646_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.11.617892_v1,10.1101/2024.10.11.617892,Quiescent cell re-entry is limited by macroautophagy-induced lysosomal damage,v1,2024-10-11,Cell Biology,Cell,10.1016/j.cell.2025.03.009,2025-05,3,22.612,30.22,extracted_data/October_2024/10.1101_2024.10.11.617892_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.11.617898_v2,10.1101/2024.10.11.617898,Identification and Targeting of Regulators of SARS-CoV-2-Host Interactions in the Airway Epithelium,v2,2024-10-11,Cell Biology,Science Advances,10.1126/sciadv.adu2079,2025-05-16,79,4.324,12.06,extracted_data/December_2024/10.1101_2024.10.11.617898_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.14.618195_v2,10.1101/2024.10.14.618195,"Chemically modified CRISPR-Cas9 enables targeting of individual G-quadruplex and i-motif structures, revealing ligand-dependent transcriptional perturbation",v2,2024-10-14,Cell Biology,Nature Communications,10.1038/s41467-025-67074-z,2025-12-09,71,4.761,14.63,extracted_data/July_2025/10.1101_2024.10.14.618195_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.14.618219_v1,10.1101/2024.10.14.618219,Beta-hairpin Mechanism of Autoinhibition and Activation in the Kinesin-2 Family,v1,2024-10-14,Cell Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01630-5,2025-10,48,6.187,6.42,extracted_data/October_2024/10.1101_2024.10.14.618219_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.14.618295_v1,10.1101/2024.10.14.618295,Cell-Type Resolved Protein Atlas of Brain Lysosomes Identifies SLC45A1-Associated Disease as a Lysosomal Disorder,v1,2024-10-14,Cell Biology,Cell,10.1016/j.cell.2025.12.012,2026-02,3,22.612,30.22,extracted_data/October_2024/10.1101_2024.10.14.618295_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.18.618947_v1,10.1101/2024.10.18.618947,TRIM24 directs replicative stress responses to maintain ALT telomeres via chromatin signaling,v1,2024-10-18,Cell Biology,Molecular Cell,10.1016/j.molcel.2025.06.009,2025-07,26,9.051,12.04,extracted_data/October_2024/10.1101_2024.10.18.618947_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.18.618984_v1,10.1101/2024.10.18.618984,Charting the landscape of cytoskeletal diversity in microbial eukaryotes,v1,2024-10-18,Cell Biology,Cell,10.1016/j.cell.2025.09.027,2025-12,3,22.612,30.22,extracted_data/October_2024/10.1101_2024.10.18.618984_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.19.619234_v3,10.1101/2024.10.19.619234,Tissue-Like Multicellular Development Triggered by Mechanical Compression in Archaea,v3,2024-10-19,Cell Biology,Science,10.1126/science.adu0047,2025-04-04,19,10.416,15.26,extracted_data/January_2025/10.1101_2024.10.19.619234_v3.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.20.618801_v1,10.1101/2024.10.20.618801,Replication-dependent histone (Repli-Histo) labeling dissects the physical properties of euchromatin/heterochromatin in living human cells,v1,2024-10-20,Cell Biology,Science Advances,10.1126/sciadv.adu8400,2025-03-28,79,4.324,12.06,extracted_data/October_2024/10.1101_2024.10.20.618801_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.25.620345_v1,10.1101/2024.10.25.620345,Spatiotemporal coordination of actin regulators generates invasive protrusions in cell-cell fusion,v1,2024-10-25,Cell Biology,Nature Cell Biology,10.1038/s41556-024-01541-5,2024-11,35,7.711,10.39,extracted_data/October_2024/10.1101_2024.10.25.620345_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.25.620372_v1,10.1101/2024.10.25.620372,Dissecting the Contribution of Transposable Elements to Interphase Chromosome Structure,v1,2024-10-25,Cell Biology,Genome Biology,10.1186/s13059-026-03945-y,2026-01-20,53,5.710,9.04,extracted_data/October_2024/10.1101_2024.10.25.620372_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.27.620174_v2,10.1101/2024.10.27.620174,Directing cellular transitions on gene graph-enhanced cell state manifold,v2,2024-10-27,Cell Biology,Nature Cell Biology,10.1038/s41556-025-01755-1,2025-10,35,7.711,10.39,extracted_data/July_2025/10.1101_2024.10.27.620174_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.28.620625_v1,10.1101/2024.10.28.620625,Nanoscale 3D DNA tracing reveals the mechanism of self-organization of mitotic chromosomes,v1,2024-10-28,Cell Biology,Cell,10.1016/j.cell.2025.02.028,2025-05,3,22.612,30.22,extracted_data/October_2024/10.1101_2024.10.28.620625_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.10.30.621134_v1,10.1101/2024.10.30.621134,ER O-glycosylation in synovial fibroblasts drives cartilage degradation,v1,2024-10-30,Cell Biology,Nature Communications,10.1038/s41467-025-57401-9,2025-03-14,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.10.30.621134_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.04.621792_v1,10.1101/2024.11.04.621792,Evolutionarily recent transcription factors partake in human cell cycle regulation,v1,2024-11-04,Cell Biology,Cell Genomics,10.1016/j.xgen.2025.100923,2025-08,46,6.238,7.85,extracted_data/November_2024/10.1101_2024.11.04.621792_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.04.621832_v1,10.1101/2024.11.04.621832,Control of Golgi- V-ATPase through Sac1-dependent co-regulation of PI(4)P and cholesterol,v1,2024-11-04,Cell Biology,Nature Communications,10.1038/s41467-025-63125-7,2025-08-21,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.04.621832_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.05.622030_v1,10.1101/2024.11.05.622030,RING1 dictates GSDMD-mediated inflammatory response and host susceptibility to pathogen infection,v1,2024-11-05,Cell Biology,Cell Death & Differentiation,10.1038/s41418-025-01527-2,2025-11,67,4.866,14.45,extracted_data/November_2024/10.1101_2024.11.05.622030_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.06.622208_v1,10.1101/2024.11.06.622208,HumanTestisDB: A Comprehensive Atlas of Testicular Transcriptomics and Cellular Interactions,v1,2024-11-06,Cell Biology,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf015,2025-05-10,98,3.964,7.21,extracted_data/November_2024/10.1101_2024.11.06.622208_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.08.622741_v1,10.1101/2024.11.08.622741,Structure of the TXNL1-bound proteasome,v1,2024-11-08,Cell Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01639-w,2025-12,48,6.187,6.42,extracted_data/November_2024/10.1101_2024.11.08.622741_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.10.622841_v1,10.1101/2024.11.10.622841,Cell-context dependent in silico organelle localization in label-free microscopy images,v1,2024-11-10,Cell Biology,Nature Methods,10.1038/s41592-025-02960-4,2026-02,8,17.251,13.51,extracted_data/November_2024/10.1101_2024.11.10.622841_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.13.623381_v1,10.1101/2024.11.13.623381,Heterochromatin epimutations impose mitochondrial dysfunction to confer antifungal resistance,v1,2024-11-13,Cell Biology,The EMBO Journal,10.1038/s44318-025-00649-0,2025-12-01,68,4.821,7.14,extracted_data/November_2024/10.1101_2024.11.13.623381_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.13.623454_v1,10.1101/2024.11.13.623454,Structural insights into SSNA1 self-assembly and its microtubule binding for centriole maintenance,v1,2024-11-13,Cell Biology,Nature Communications,10.1038/s41467-025-62696-9,2025-08-13,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.13.623454_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.14.623710_v2,10.1101/2024.11.14.623710,An ER-resident lipid scramblase is crucial for biogenesis and function of apicomplexan parasite secretory organelles,v2,2024-11-14,Cell Biology,Nature Communications,10.1038/s41467-025-66303-9,2025-12-13,71,4.761,14.63,extracted_data/January_2025/10.1101_2024.11.14.623710_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.15.623571_v1,10.1101/2024.11.15.623571,Dynamic change of calcium-rich compartments during coccolithophore biomineralization,v1,2024-11-15,Cell Biology,Science Advances,10.1126/sciadv.adv0618,2025-07-25,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.15.623571_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.16.623909_v1,10.1101/2024.11.16.623909,Dynamic cytoplasmic fluidity during morphogenesis in a human fungal pathogen,v1,2024-11-16,Cell Biology,Nature Microbiology,10.1038/s41564-025-02205-2,2025-12-10,40,6.893,12.22,extracted_data/November_2024/10.1101_2024.11.16.623909_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.18.624146_v4,10.1101/2024.11.18.624146,CATSPERε extracellular domains are essential for sperm calcium channel assembly and activity modulation,v4,2024-11-18,Cell Biology,Science Advances,10.1126/sciadv.adw3414,2026-01-30,79,4.324,12.06,extracted_data/October_2025/10.1101_2024.11.18.624146_v4.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.19.624364_v2,10.1101/2024.11.19.624364,Actomyosin forces trigger a conformational change in desmoplakin within desmosomes,v2,2024-11-19,Cell Biology,Nature Communications,10.1038/s41467-025-64124-4,2025-10-10,71,4.761,14.63,extracted_data/April_2025/10.1101_2024.11.19.624364_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.20.624351_v1,10.1101/2024.11.20.624351,Defining the parameters for sorting of different RNA cargo into Extracellular vesicles,v1,2024-11-20,Cell Biology,Journal of Extracellular Vesicles,10.1002/jev2.70113,2025-07,75,4.524,13.60,extracted_data/November_2024/10.1101_2024.11.20.624351_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.20.624519_v1,10.1101/2024.11.20.624519,Delayed protein translocation protects mitochondria against toxic CAT-tailed proteins,v1,2024-11-20,Cell Biology,Molecular Cell,10.1016/j.molcel.2025.09.030,2025-11,26,9.051,12.04,extracted_data/November_2024/10.1101_2024.11.20.624519_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.22.622898_v1,10.1101/2024.11.22.622898,Mapping the endosomal proximity proteome reveals Retromer as a hub for RAB GTPase regulation,v1,2024-11-22,Cell Biology,Nature Communications,10.1038/s41467-025-61802-1,2025-07-30,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.22.622898_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.11.27.625738_v1,10.1101/2024.11.27.625738,Notch Signaling Drives Pro-Regenerative and Migratory Traits in Glandular Stem/Progenitor cells,v1,2024-11-27,Cell Biology,The EMBO Journal,10.1038/s44318-025-00607-w,2025-11-05,68,4.821,7.14,extracted_data/November_2024/10.1101_2024.11.27.625738_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.02.623560_v1,10.1101/2024.12.02.623560,VEXAS anemia is a mosaic erythroblastopenia,v1,2024-12-02,Cell Biology,Blood,10.1182/blood.2025029081,2026-03-12,51,5.823,7.31,extracted_data/December_2024/10.1101_2024.12.02.623560_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.02.626432_v1,10.1101/2024.12.02.626432,Control of Epithelial Tissue Organization by mRNA Localization,v1,2024-12-02,Cell Biology,Nature Communications,10.1038/s41467-025-60532-8,2025-06-05,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.02.626432_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.05.627000_v1,10.1101/2024.12.05.627000,CENcyclopedia: Dynamic Landscape of Kinetochore Architecture Throughout the Cell Cycle,v1,2024-12-05,Cell Biology,Nature Communications,10.1038/s41467-025-62316-6,2025-08-18,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.05.627000_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.05.627003_v1,10.1101/2024.12.05.627003,Molecular Insights into the Regulation of GNPTAB by TMEM251,v1,2024-12-05,Cell Biology,Nature Communications,10.1038/s41467-026-70402-6,2026-03-11,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.05.627003_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.09.627452_v1,10.1101/2024.12.09.627452,A new class of natural anthelmintics targeting lipid metabolism,v1,2024-12-09,Cell Biology,Nature Communications,10.1038/s41467-024-54965-w,2025-01-02,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.09.627452_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.10.627730_v3,10.1101/2024.12.10.627730,Spatially resolved rewiring of mitochondria-lipid droplet interactions in hepatic lipid homeostasis,v3,2024-12-10,Cell Biology,Nature Metabolism,10.1038/s42255-026-01476-1,2026-03-23,36,7.529,11.55,extracted_data/December_2025/10.1101_2024.12.10.627730_v3.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.10.627736_v1,10.1101/2024.12.10.627736,Oncogenic RAS Induces a Distinctive Form of Non-Canonical Autophagy Mediated by the P38-ULK1-PI4KB Axis,v1,2024-12-10,Cell Biology,Cell Research,10.1038/s41422-025-01085-9,2025-03-07,27,8.740,9.06,extracted_data/December_2024/10.1101_2024.12.10.627736_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.12.628015_v1,10.1101/2024.12.12.628015,FAF2 is a bifunctional regulator of peroxisomal homeostasis and saturated lipid responses,v1,2024-12-12,Cell Biology,Science Advances,10.1126/sciadv.adu9104,2025-07-04,79,4.324,12.06,extracted_data/December_2024/10.1101_2024.12.12.628015_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.12.628181_v2,10.1101/2024.12.12.628181,NRBP1 pseudokinase binds to and activates the WNK pathway in response to osmotic stress,v2,2024-12-12,Cell Biology,Science Advances,10.1126/sciadv.adv4636,2025-07-18,79,4.324,12.06,extracted_data/December_2024/10.1101_2024.12.12.628181_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.12.628219_v2,10.1101/2024.12.12.628219,RNA-specific local translation is patterned by condensates for multinucleate cell growth,v2,2024-12-12,Cell Biology,Nature Cell Biology,10.1038/s41556-026-01887-y,2026-03,35,7.711,10.39,extracted_data/October_2025/10.1101_2024.12.12.628219_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.13.628451_v1,10.1101/2024.12.13.628451,PERK Signaling Maintains Hematopoietic Stem Cell Pool Integrity under Endoplasmic Reticulum Stress by Promoting Proliferation,v1,2024-12-13,Cell Biology,Blood,10.1182/blood.2024027846,2025-08-14,51,5.823,7.31,extracted_data/December_2024/10.1101_2024.12.13.628451_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.14.627418_v1,10.1101/2024.12.14.627418,The dual coding gene SLC35A4 protects against oxidative stress,v1,2024-12-14,Cell Biology,Protein Science,10.1002/pro.70197,2025-07,73,4.657,6.35,extracted_data/December_2024/10.1101_2024.12.14.627418_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.16.628669_v1,10.1101/2024.12.16.628669,Metformin inhibits nuclear egress of chromatin fragments in senescence and aging,v1,2024-12-16,Cell Biology,Nature Aging,10.1038/s43587-025-01048-0,2026-01-16,37,7.081,8.97,extracted_data/December_2024/10.1101_2024.12.16.628669_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.17.628987_v1,10.1101/2024.12.17.628987,Extracellular Exosomal RNAs are Glyco-Modified,v1,2024-12-17,Cell Biology,Nature Cell Biology,10.1038/s41556-025-01682-1,2025-06,35,7.711,10.39,extracted_data/December_2024/10.1101_2024.12.17.628987_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.19.628843_v1,10.1101/2024.12.19.628843,Spatial Perturb-Seq: Single-Cell Functional Genomics within Intact Tissue Architecture,v1,2024-12-19,Cell Biology,Nature Communications,10.1038/s41467-026-69677-6,2026-02-21,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.19.628843_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.19.629291_v1,10.1101/2024.12.19.629291,An in-cell approach to evaluate E3 ligases for use in targeted protein degradation,v1,2024-12-19,Cell Biology,Journal of the American Chemical Society,10.1021/jacs.5c02741,2025-06-25,55,5.554,15.01,extracted_data/January_2025/10.1101_2024.12.19.629291_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.20.629850_v2,10.1101/2024.12.20.629850,Location-Dependent Differences in Cardiac and Skeletal Muscle Dysfunction Associated With Truncating Titin (ttn.2) Variants,v2,2024-12-20,Cell Biology,Circulation Research,10.1161/CIRCRESAHA.124.325999,2026-01-30,66,4.897,11.24,extracted_data/December_2024/10.1101_2024.12.20.629850_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.22.629979_v1,10.1101/2024.12.22.629979,Fbxo42 promotes the degradation of Ataxin-2 granules to trigger terminal Xbp1 signaling,v1,2024-12-22,Cell Biology,Nature Communications,10.1038/s41467-025-62417-2,2025-08-13,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.22.629979_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.23.628302_v1,10.1101/2024.12.23.628302,LBR and LAP2 mediate heterochromatin tethering to the nuclear periphery to preserve genome homeostasis,v1,2024-12-23,Cell Biology,Nature Cell Biology,10.1038/s41556-025-01822-7,2026-03,35,7.711,10.39,extracted_data/December_2024/10.1101_2024.12.23.628302_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.25.630233_v3,10.1101/2024.12.25.630233,Optogenetic actin network assembly on lipid bilayer uncovers the network density-dependent functions of actin-binding proteins,v3,2024-12-25,Cell Biology,Nature Communications,10.1038/s41467-025-62653-6,2025-08-26,71,4.761,14.63,extracted_data/June_2025/10.1101_2024.12.25.630233_v3.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.27.630454_v1,10.1101/2024.12.27.630454,Cellular Function of a Biomolecular Condensate Is Determined by Its Ultrastructure,v1,2024-12-27,Cell Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01742-y,2026-03,48,6.187,6.42,extracted_data/December_2024/10.1101_2024.12.27.630454_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.28.630444_v1,10.1101/2024.12.28.630444,Towards community-driven visual proteomics with large-scale cryo-electron tomography of Chlamydomonas reinhardtii,v1,2024-12-28,Cell Biology,Molecular Cell,10.1016/j.molcel.2025.11.029,2026-01,26,9.051,12.04,extracted_data/December_2024/10.1101_2024.12.28.630444_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.29.630686_v1,10.1101/2024.12.29.630686,Induction of Senescence During Postpartum Mammary Gland Involution supports tissue remodeling and promotes postpartum tumorigenesis,v1,2024-12-29,Cell Biology,Nature Aging,10.1038/s43587-025-01058-y,2026-02-18,37,7.081,8.97,extracted_data/December_2024/10.1101_2024.12.29.630686_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2024.12.31.630809_v1,10.1101/2024.12.31.630809,TOR and heat shock response pathways regulate peroxisome biogenesis during proteotoxic stress,v1,2024-12-31,Cell Biology,Nature Communications,10.1038/s41467-025-65776-y,2025-11-28,71,4.761,14.63,extracted_data/January_2025/10.1101_2024.12.31.630809_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.01.630988_v1,10.1101/2025.01.01.630988,GPNMB is a biomarker for lysosomal dysfunction and is secreted via LRRK2-modulated lysosomal exocytosis,v1,2025-01-01,Cell Biology,Science Advances,10.1126/sciadv.adv1434,2025-12-19,79,4.324,12.06,extracted_data/January_2025/10.1101_2025.01.01.630988_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.02.629617_v1,10.1101/2025.01.02.629617,In vivo itaconate tracing reveals degradation pathway and turnover kinetics,v1,2025-01-02,Cell Biology,Nature Metabolism,10.1038/s42255-025-01363-1,2025-09-10,36,7.529,11.55,extracted_data/January_2025/10.1101_2025.01.02.629617_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.05.631328_v2,10.1101/2025.01.05.631328,MISO Regulates Mitochondrial Dynamics and mtDNA Homeostasis by Establishing Membrane Subdomains,v2,2025-01-05,Cell Biology,Nature Cell Biology,10.1038/s41556-025-01829-0,2026-02,35,7.711,10.39,extracted_data/September_2025/10.1101_2025.01.05.631328_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.08.631933_v1,10.1101/2025.01.08.631933,Golgi-associated nuclear import receptor importin-7 targets HPV from the Golgi to the nucleus to promote infection,v1,2025-01-08,Cell Biology,Science Advances,10.1126/sciadv.adz6792,2025-10-24,79,4.324,12.06,extracted_data/January_2025/10.1101_2025.01.08.631933_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.11.632510_v1,10.1101/2025.01.11.632510,Cholesterol deficiency directs autophagy-dependent secretion of extracellular vesicles,v1,2025-01-11,Cell Biology,Journal of Extracellular Vesicles,10.1002/jev2.70218,2026-01,75,4.524,13.60,extracted_data/January_2025/10.1101_2025.01.11.632510_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.15.632531_v1,10.1101/2025.01.15.632531,Keratin intermediate filaments mechanically position melanin pigments for genome photoprotection,v1,2025-01-15,Cell Biology,Nature Cell Biology,10.1038/s41556-025-01817-4,2026-01,35,7.711,10.39,extracted_data/January_2025/10.1101_2025.01.15.632531_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.15.633243_v1,10.1101/2025.01.15.633243,ER-associated degradation relying on protein O-mannosylation,v1,2025-01-15,Cell Biology,The EMBO Journal,10.1038/s44318-025-00647-2,2025-12-05,68,4.821,7.14,extracted_data/January_2025/10.1101_2025.01.15.633243_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.20.633941_v1,10.1101/2025.01.20.633941,Nanoscale Dynamics of Enhancer-Promoter Interactions during Exit from Pluripotency,v1,2025-01-20,Cell Biology,Nucleic Acids Research,10.1093/nar/gkaf1255,2025-11-26,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.20.633941_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.20.633960_v1,10.1101/2025.01.20.633960,PERK orchestrates MERCS formation and mitochondrial remodelling promoting physiological adaptations during adaptive UPR signalling,v1,2025-01-20,Cell Biology,Cell Death & Differentiation,10.1038/s41418-025-01603-7,2026-04,67,4.866,14.45,extracted_data/January_2025/10.1101_2025.01.20.633960_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.22.634232_v1,10.1101/2025.01.22.634232,Phase transition of spindle pole localized protein orchestrates nuclear organization at mitotic exit,v1,2025-01-22,Cell Biology,The EMBO Journal,10.1038/s44318-025-00564-4,2025-09-12,68,4.821,7.14,extracted_data/January_2025/10.1101_2025.01.22.634232_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.23.634455_v2,10.1101/2025.01.23.634455,Super-resolution microscopy of mitochondrial mRNAs,v2,2025-01-23,Cell Biology,Nature Communications,10.1038/s41467-025-61577-5,2025-07-10,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.01.23.634455_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.25.634887_v1,10.1101/2025.01.25.634887,Basigin Links Altered Skeletal Stem Cell Lineage Dynamics with Glucocorticoid-induced Bone Loss and Impaired Angiogenesis,v1,2025-01-25,Cell Biology,Nature Communications,10.1038/s41467-025-62881-w,2025-08-15,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.25.634887_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.26.634856_v2,10.1101/2025.01.26.634856,A niche-dependent redox rheostat regulates epithelial stem cell fate,v2,2025-01-26,Cell Biology,Nature Communications,10.1038/s41467-025-66636-5,2025-11-28,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.01.26.634856_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.01.30.634294_v1,10.1101/2025.01.30.634294,Single cell-resolved transcriptional dynamics of human subcutaneous adipose tissue during lifestyle- and bariatric surgery-induced weight loss,v1,2025-01-30,Cell Biology,Nature Metabolism,10.1038/s42255-025-01433-4,2026-01-12,36,7.529,11.55,extracted_data/February_2025/10.1101_2025.01.30.634294_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.01.633781_v1,10.1101/2025.02.01.633781,FUS post-transcriptional splicing is autoregulated via RNA condensation with therapeutic potential for ALS-FUS,v1,2025-02-01,Cell Biology,Science Advances,10.1126/sciadv.adx1357,2025-07-25,79,4.324,12.06,extracted_data/February_2025/10.1101_2025.02.01.633781_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.04.636395_v1,10.1101/2025.02.04.636395,Identification of a RAB32-LRMDA-Commander membrane trafficking complex reveals the molecular mechanism of human oculocutaneous albinism type 7,v1,2025-02-04,Cell Biology,Nature Communications,10.1038/s41467-025-63855-8,2025-10-02,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.04.636395_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.05.635468_v1,10.1101/2025.02.05.635468,Continuum architecture dynamics of vesicle tethering in exocytosis,v1,2025-02-05,Cell Biology,Cell,10.1016/j.cell.2025.11.038,2026-02,3,22.612,30.22,extracted_data/February_2025/10.1101_2025.02.05.635468_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.06.636921_v2,10.1101/2025.02.06.636921,AI-assisted protein design to rapidly convert antibody sequences to intrabodies targeting diverse peptides and histone modifications,v2,2025-02-06,Cell Biology,Science Advances,10.1126/sciadv.adx8352,2026-01-02,79,4.324,12.06,extracted_data/February_2025/10.1101_2025.02.06.636921_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.07.636106_v1,10.1101/2025.02.07.636106,"EndoMAP.v1, a Structural Protein Complex Landscape of Human Endosomes",v1,2025-02-07,Cell Biology,Nature,10.1038/s41586-025-09059-y,2025-07-03,7,18.288,18.47,extracted_data/February_2025/10.1101_2025.02.07.636106_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.07.636917_v1,10.1101/2025.02.07.636917,Niche-driven phenotypic plasticity and cis-regulatory dynamics of a revised model for intestinal secretory differentiation,v1,2025-02-07,Cell Biology,Cell Stem Cell,10.1016/j.stem.2025.03.005,2025-06,23,9.313,12.67,extracted_data/February_2025/10.1101_2025.02.07.636917_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.10.637451_v1,10.1101/2025.02.10.637451,Cohesin drives chromatin scanning during the RAD51-mediated homology search,v1,2025-02-10,Cell Biology,Science,10.1126/science.adw1928,2025-12-04,19,10.416,15.26,extracted_data/February_2025/10.1101_2025.02.10.637451_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.12.637885_v1,10.1101/2025.02.12.637885,Epsin1 enforces a condensation-dependent checkpoint for ubiquitylated cargo during clathrin-mediated endocytosis,v1,2025-02-12,Cell Biology,Nature Communications,10.1038/s41467-025-63238-z,2025-08-25,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.12.637885_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.12.637890_v1,10.1101/2025.02.12.637890,Co-translational determination of quaternary structures in chaperone factories,v1,2025-02-12,Cell Biology,Nature Communications,10.1038/s41467-026-68687-8,2026-01-23,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.12.637890_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.14.638270_v2,10.1101/2025.02.14.638270,Mrx6 binds the Lon protease Pim1 N-terminal domain to confer selective substrate specificity and regulate mtDNA copy number,v2,2025-02-14,Cell Biology,Nucleic Acids Research,10.1093/nar/gkaf1390,2026-01-14,34,7.776,16.90,extracted_data/February_2025/10.1101_2025.02.14.638270_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.14.638390_v2,10.1101/2025.02.14.638390,Glucosylceramide induced ectosomes propagate pathogenic α-synuclein in Parkinson’s disease,v2,2025-02-14,Cell Biology,Nature Cell Biology,10.1038/s41556-026-01871-6,2026-03,35,7.711,10.39,extracted_data/February_2025/10.1101_2025.02.14.638390_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.15.638423_v1,10.1101/2025.02.15.638423,Dietary cysteine enhances intestinal stemness via CD8+ T cell-derived IL-22,v1,2025-02-15,Cell Biology,Nature,10.1038/s41586-025-09589-5,2025-11-20,7,18.288,18.47,extracted_data/February_2025/10.1101_2025.02.15.638423_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.17.638590_v2,10.1101/2025.02.17.638590,The Mn-motif protein MAP6d1 assembles ciliary doublet microtubules,v2,2025-02-17,Cell Biology,Nature Communications,10.1038/s41467-025-61679-0,2025-07-05,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.17.638590_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.17.638629_v2,10.1101/2025.02.17.638629,The ParB-CTP Cycle Activates Phase Separation in Bacterial DNA Segregation,v2,2025-02-17,Cell Biology,Nucleic Acids Research,10.1093/nar/gkaf944,2025-09-23,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.02.17.638629_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.18.638932_v1,10.1101/2025.02.18.638932,CHIP protects lysosomes from CLN4 mutant-induced membrane damages,v1,2025-02-18,Cell Biology,Nature Cell Biology,10.1038/s41556-025-01738-2,2025-09,35,7.711,10.39,extracted_data/February_2025/10.1101_2025.02.18.638932_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.19.639145_v2,10.1101/2025.02.19.639145,"A protein complex in the extreme distal tip of vertebrate motile cilia controls their organization, length, and function",v2,2025-02-19,Cell Biology,Nature Communications,10.1038/s41467-025-67086-9,2025-12-21,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.02.19.639145_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.19.639158_v1,10.1101/2025.02.19.639158,Examination of germline and somatic intercellular bridges in Hydra vulgaris reveals insights into the evolutionarily conserved mechanism of intercellular bridge formation,v1,2025-02-19,Cell Biology,Molecular Biology and Evolution,10.1093/molbev/msaf248,2025-10-29,89,4.085,5.04,extracted_data/February_2025/10.1101_2025.02.19.639158_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.19.639160_v1,10.1101/2025.02.19.639160,Novel reporter of the PINK1-Parkin mitophagy pathway identifies its damage sensor in the import gate,v1,2025-02-19,Cell Biology,The EMBO Journal,10.1038/s44318-025-00604-z,2025-11-20,68,4.821,7.14,extracted_data/February_2025/10.1101_2025.02.19.639160_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.19.639191_v1,10.1101/2025.02.19.639191,Cloche/Npas4l is a pro-regenerative platelet factor during zebrafish heart regeneration,v1,2025-02-19,Cell Biology,Developmental Cell,10.1016/j.devcel.2025.06.015,2025-11,62,5.180,7.30,extracted_data/February_2025/10.1101_2025.02.19.639191_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.21.639251_v1,10.1101/2025.02.21.639251,Spatial mapping of DNA synthesis reveals dynamics and geometry of human replication nanostructures,v1,2025-02-21,Cell Biology,The EMBO Journal,10.1038/s44318-025-00574-2,2025-10-07,68,4.821,7.14,extracted_data/February_2025/10.1101_2025.02.21.639251_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.21.639471_v1,10.1101/2025.02.21.639471,Dynamic Organellar Mapping in yeast reveals extensive protein localization changes during ER stress,v1,2025-02-21,Cell Biology,Nature Communications,10.1038/s41467-025-66946-8,2025-12-02,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.21.639471_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.21.639482_v1,10.1101/2025.02.21.639482,Phosphatase specificity influences phosphorylation timing of CDK substrates during the cell cycle,v1,2025-02-21,Cell Biology,Nature Communications,10.1038/s41467-025-66547-5,2025-11-24,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.21.639482_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.22.639686_v1,10.1101/2025.02.22.639686,Structural basis for the midnolin-proteasome pathway and its role in suppressing myeloma,v1,2025-02-22,Cell Biology,Molecular Cell,10.1016/j.molcel.2025.05.030,2025-07,26,9.051,12.04,extracted_data/February_2025/10.1101_2025.02.22.639686_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.25.640160_v2,10.1101/2025.02.25.640160,Identification of a Lipid Oxygen Radical Defense pathway and its epigenetic control,v2,2025-02-25,Cell Biology,Nature Communications,10.1038/s41467-025-67304-4,2025-12-11,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.02.25.640160_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.26.640314_v1,10.1101/2025.02.26.640314,Mapping the genetic landscape of iron metabolism uncovers the SETD2 methyltransferase as a modulator of iron flux,v1,2025-02-26,Cell Biology,Science Advances,10.1126/sciadv.adw9095,2025-09-19,79,4.324,12.06,extracted_data/February_2025/10.1101_2025.02.26.640314_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.02.27.640608_v1,10.1101/2025.02.27.640608,In-cell Structure and Variability of Pyrenoid Rubisco,v1,2025-02-27,Cell Biology,Nature Communications,10.1038/s41467-025-62998-y,2025-08-20,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.27.640608_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.03.04.641455_v1,10.1101/2025.03.04.641455,Stress adaptation of mitochondrial protein import by OMA1-mediated degradation of DNAJC15,v1,2025-03-04,Cell Biology,Nature Structural & Molecular Biology,10.1038/s41594-026-01756-0,2026-03,48,6.187,6.42,extracted_data/March_2025/10.1101_2025.03.04.641455_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.03.13.642412_v1,10.1101/2025.03.13.642412,Dynamic subcellular proteomics identifies novel regulators of adipocyte insulin action,v1,2025-03-13,Cell Biology,Nature Communications,10.1038/s41467-026-70116-9,2026-02-28,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.13.642412_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.03.13.643016_v1,10.1101/2025.03.13.643016,Impaired stem cell migration and divisions in Duchenne Muscular Dystrophy revealed by live imaging,v1,2025-03-13,Cell Biology,Nature Communications,10.1038/s41467-026-68474-5,2026-01-28,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.13.643016_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.03.19.643339_v1,10.1101/2025.03.19.643339,CTCF-RNA interactions orchestrate cell-specific chromatin loop organization,v1,2025-03-19,Cell Biology,Science Advances,10.1126/sciadv.ady5507,2025-11-28,79,4.324,12.06,extracted_data/March_2025/10.1101_2025.03.19.643339_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.03.20.644437_v1,10.1101/2025.03.20.644437,SEL1L-HRD1 ER-Associated Degradation Facilitates Prohormone Convertase 2 Maturation and Glucagon Production in Islet α Cells,v1,2025-03-20,Cell Biology,Nature Communications,10.1038/s41467-026-69928-6,2026-02-25,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.20.644437_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.03.24.645142_v1,10.1101/2025.03.24.645142,ZBP1 Senses Splicing Aberration through Z-RNA to promote Cell Death,v1,2025-03-24,Cell Biology,Molecular Cell,10.1016/j.molcel.2025.03.023,2025-05,26,9.051,12.04,extracted_data/March_2025/10.1101_2025.03.24.645142_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.03.25.645313_v1,10.1101/2025.03.25.645313,PIEZO1 Drives Trophoblast Fusion and Placental Development,v1,2025-03-25,Cell Biology,Nature Communications,10.1038/s41467-025-62254-3,2025-07-26,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.25.645313_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.03.27.645654_v1,10.1101/2025.03.27.645654,Codon-specific ribosome stalling reshapes translational dynamics during branched-chain amino acid starvation,v1,2025-03-27,Cell Biology,Genome Biology,10.1186/s13059-025-03800-6,2025-09-27,53,5.710,9.04,extracted_data/March_2025/10.1101_2025.03.27.645654_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.03.27.645793_v1,10.1101/2025.03.27.645793,In vivo self-renewal and expansion of quiescent stem cells from a non-human primate,v1,2025-03-27,Cell Biology,Nature Communications,10.1038/s41467-025-58897-x,2025-06-24,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.27.645793_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.03.28.645873_v1,10.1101/2025.03.28.645873,Identification of epigenetic regulators of fibrotic transformation in cardiac fibroblasts through bulk and single-cell CRISPR screens,v1,2025-03-28,Cell Biology,Nature Communications,10.1038/s41467-025-66597-9,2025-11-26,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.28.645873_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.04.01.646705_v2,10.1101/2025.04.01.646705,Accelerated Discovery of Cell Migration Regulators Using Label-Free Deep Learning-Based Automated Tracking,v2,2025-04-01,Cell Biology,Science Advances,10.1126/sciadv.aea1492,2026-03-13,79,4.324,12.06,extracted_data/April_2025/10.1101_2025.04.01.646705_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.04.03.646909_v1,10.1101/2025.04.03.646909,Linear ubiquitination triggers Amph-mediated T-tubule biogenesis,v1,2025-04-03,Cell Biology,Science Advances,10.1126/sciadv.ady4934,2026-01-09,79,4.324,12.06,extracted_data/April_2025/10.1101_2025.04.03.646909_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.04.03.646995_v1,10.1101/2025.04.03.646995,"The Second Mitochondrial Activator of Caspases (SMAC) regulates growth, inflammation and mitochondrial integrity in cancer cells",v1,2025-04-03,Cell Biology,Cell Death & Differentiation,10.1038/s41418-026-01667-z,2026-02-03,67,4.866,14.45,extracted_data/April_2025/10.1101_2025.04.03.646995_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.04.03.647108_v1,10.1101/2025.04.03.647108,Gangliosides Modulate the Secretion of Extracellular Vesicles and Their Misfolded Protein Cargo,v1,2025-04-03,Cell Biology,Science Advances,10.1126/sciadv.ady5212,2025-09-19,79,4.324,12.06,extracted_data/April_2025/10.1101_2025.04.03.647108_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.04.04.647219_v1,10.1101/2025.04.04.647219,Smart hybrid microscopy for cell-friendly detection of rare events,v1,2025-04-04,Cell Biology,Nature Communications,10.1038/s41467-025-68168-4,2026-01-07,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.04.647219_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.04.12.648511_v3,10.1101/2025.04.12.648511,An Essential Adaptor for Apicoplast Fission and Inheritance in Malaria Parasites,v3,2025-04-12,Cell Biology,Nature Communications,10.1038/s41467-025-66393-5,2025-11-27,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.04.12.648511_v3.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.04.28.650974_v1,10.1101/2025.04.28.650974,"High-throughput peptide-centric local stability assay extends protein-ligand identification to membrane proteins, tissues, and bacteria",v1,2025-04-28,Cell Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01699-y,2026-01,48,6.187,6.42,extracted_data/April_2025/10.1101_2025.04.28.650974_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.05.05.652164_v1,10.1101/2025.05.05.652164,mRNA trafficking directs cell-size-scaling of mitochondria distribution and function,v1,2025-05-05,Cell Biology,Nature Communications,10.1038/s41467-025-61940-6,2025-07-31,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.05.652164_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.05.07.652730_v1,10.1101/2025.05.07.652730,Spindle-localized F-actin regulates polar MTOC organization and the fidelity of meiotic spindle formation,v1,2025-05-07,Cell Biology,Nature Communications,10.1038/s41467-025-63586-w,2025-09-19,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.07.652730_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.05.08.652885_v1,10.1101/2025.05.08.652885,The proteostatic landscape of healthy human oocytes,v1,2025-05-08,Cell Biology,The EMBO Journal,10.1038/s44318-025-00493-2,2025-07-16,68,4.821,7.14,extracted_data/May_2025/10.1101_2025.05.08.652885_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.05.12.653522_v2,10.1101/2025.05.12.653522,Conformational biosensors delineate endosomal G protein regulation by GPCRs,v2,2025-05-12,Cell Biology,Nature Communications,10.1038/s41467-026-69329-9,2026-02-18,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.05.12.653522_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.05.13.653730_v1,10.1101/2025.05.13.653730,Single-cell RNA sequencing reveals distinct senotypes and a quiescence-senescence continuum at the transcriptome level following chemotherapy,v1,2025-05-13,Cell Biology,Nature Communications,10.1038/s41467-025-66836-z,2025-12-23,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.13.653730_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.05.16.654472_v1,10.1101/2025.05.16.654472,Lysosomal control of proteostasis and reproductive capacity by conserved LMD-3 protein in C. elegans,v1,2025-05-16,Cell Biology,Science Advances,10.1126/sciadv.adz3192,2025-11-28,79,4.324,12.06,extracted_data/May_2025/10.1101_2025.05.16.654472_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.05.19.654756_v1,10.1101/2025.05.19.654756,OMA1-mediated cleavage of AIFM1 upon mitochondrial stress and suppression of cell growth through the control of OXPHOS activity,v1,2025-05-19,Cell Biology,The EMBO Journal,10.1038/s44318-026-00734-y,2026-03-24,68,4.821,7.14,extracted_data/May_2025/10.1101_2025.05.19.654756_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.05.20.655034_v1,10.1101/2025.05.20.655034,Cancer-Associated USP28 Missense Mutations Disrupt 53BP1 Interaction and p53 Stabilization,v1,2025-05-20,Cell Biology,Nature Communications,10.1038/s41467-025-66341-3,2025-12-09,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.20.655034_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.05.21.655426_v1,10.1101/2025.05.21.655426,Rate Limiting Enzymes in Nucleotide Metabolism Synchronize Nucleotide Biosynthesis and Chromatin Formation,v1,2025-05-21,Cell Biology,Molecular Cell,10.1016/j.molcel.2025.11.009,2025-12,26,9.051,12.04,extracted_data/May_2025/10.1101_2025.05.21.655426_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.05.29.656564_v1,10.1101/2025.05.29.656564,STARD3 coordinates Endoplasmic Reticulum-late endosome/lysosome contacts and organelle positioning through a GSK3-regulated phosphorylation switch,v1,2025-05-29,Cell Biology,The EMBO Journal,10.1038/s44318-026-00705-3,2026-02-25,68,4.821,7.14,extracted_data/May_2025/10.1101_2025.05.29.656564_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.06.02.657035_v1,10.1101/2025.06.02.657035,The Balance between B55α and Greatwall expression levels predicts sensitivity to Greatwall inhibition in cancer cells,v1,2025-06-02,Cell Biology,Nature Communications,10.1038/s41467-025-62943-z,2025-08-27,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.02.657035_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.06.10.656592_v1,10.1101/2025.06.10.656592,ATXN3 regulates lysosome regeneration after damage by targeting K48-K63-branched ubiquitin chains,v1,2025-06-10,Cell Biology,The EMBO Journal,10.1038/s44318-025-00517-x,2025-07-29,68,4.821,7.14,extracted_data/June_2025/10.1101_2025.06.10.656592_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.06.10.658800_v1,10.1101/2025.06.10.658800,Human meibomian gland organoids to study epithelial homeostasis and dysfunction,v1,2025-06-10,Cell Biology,Protein & Cell,10.1093/procel/pwaf095,2025-11-09,60,5.392,7.91,extracted_data/June_2025/10.1101_2025.06.10.658800_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.06.16.659902_v1,10.1101/2025.06.16.659902,Mitotic BLM functions are required to maintain genomic stability,v1,2025-06-16,Cell Biology,Nucleic Acids Research,10.1093/nar/gkag199,2026-02-24,34,7.776,16.90,extracted_data/June_2025/10.1101_2025.06.16.659902_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.06.20.660750_v2,10.1101/2025.06.20.660750,Herpes simplex virus 1 fluidizes the nucleus enabling condensate formation,v2,2025-06-20,Cell Biology,Molecular Cell,10.1016/j.molcel.2026.02.005,2026-03,26,9.051,12.04,extracted_data/February_2026/10.1101_2025.06.20.660750_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.06.24.660981_v2,10.1101/2025.06.24.660981,Host iron deficiency protects against Plasmodium infection and drives parasite molecular reprofiling,v2,2025-06-24,Cell Biology,Science Advances,10.1126/sciadv.aeb0828,2026-02-27,79,4.324,12.06,extracted_data/July_2025/10.1101_2025.06.24.660981_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.06.25.661639_v1,10.1101/2025.06.25.661639,Quantitative proteomics and phosphoproteomics reveal glucocorticoid stimulation of TLR and Rho GTPase signaling in neutrophil-like cells,v1,2025-06-25,Cell Biology,Genome Biology,10.1186/s13059-026-03985-4,2026-02-05,53,5.710,9.04,extracted_data/June_2025/10.1101_2025.06.25.661639_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.06.26.661719_v1,10.1101/2025.06.26.661719,The mechanistic basis of cargo selection during Golgi maturation,v1,2025-06-26,Cell Biology,Science Advances,10.1126/sciadv.aea0016,2025-10-03,79,4.324,12.06,extracted_data/June_2025/10.1101_2025.06.26.661719_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.06.27.661933_v1,10.1101/2025.06.27.661933,M18BP1 valency and a distributed interaction footprint determine epigenetic centromere specification in humans,v1,2025-06-27,Cell Biology,The EMBO Journal,10.1038/s44318-026-00698-z,2026-02-02,68,4.821,7.14,extracted_data/July_2025/10.1101_2025.06.27.661933_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.06.29.662044_v1,10.1101/2025.06.29.662044,A mitotic bookmark coordinates transcription and replication,v1,2025-06-29,Cell Biology,Nucleic Acids Research,10.1093/nar/gkaf1429,2025-11-26,34,7.776,16.90,extracted_data/July_2025/10.1101_2025.06.29.662044_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.07.08.663243_v1,10.1101/2025.07.08.663243,A deep single cell mass cytometry approach to capture canonical and noncanonical cell cycle states,v1,2025-07-08,Cell Biology,Nature Communications,10.1038/s41467-025-63883-4,2025-10-03,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.08.663243_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.07.15.665031_v1,10.1101/2025.07.15.665031,MYC modulates TOP2A diffusion to promote substrate detection and activity,v1,2025-07-15,Cell Biology,Nature Communications,10.1038/s41467-026-69232-3,2026-02-09,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.15.665031_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.07.16.665106_v1,10.1101/2025.07.16.665106,Prediction of cellular morphology change under perturbations with transcriptome-guided diffusion model,v1,2025-07-16,Cell Biology,Nature Communications,10.1038/s41467-025-63478-z,2025-09-02,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.16.665106_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.07.22.665954_v1,10.1101/2025.07.22.665954,Multifunctional Roles of Brr6 and Brl1 in Nuclear Envelope Fusion During Nuclear Pore Complex Biogenesis,v1,2025-07-22,Cell Biology,The EMBO Journal,10.1038/s44318-026-00718-y,2026-02-16,68,4.821,7.14,extracted_data/July_2025/10.1101_2025.07.22.665954_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.07.23.666255_v1,10.1101/2025.07.23.666255,Development of a live-cell imaging assay to elucidate spatiotemporal dynamics of extracellular vesicle fusion with target cells,v1,2025-07-23,Cell Biology,Journal of Extracellular Vesicles,10.1002/jev2.70228,2026-03,75,4.524,13.60,extracted_data/July_2025/10.1101_2025.07.23.666255_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.07.26.666935_v1,10.1101/2025.07.26.666935,Differential immune- and apoptosis-related gene signatures in pancreatic alpha and beta cells contribute to their fate in type 1 diabetes,v1,2025-07-26,Cell Biology,Cell Death & Differentiation,10.1038/s41418-026-01669-x,2026-01-30,67,4.866,14.45,extracted_data/August_2025/10.1101_2025.07.26.666935_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.08.05.668651_v1,10.1101/2025.08.05.668651,Riboflavin metabolism shapes FSP1-driven ferroptosis resistance,v1,2025-08-05,Cell Biology,Nature Cell Biology,10.1038/s41556-025-01856-x,2026-04,35,7.711,10.39,extracted_data/August_2025/10.1101_2025.08.05.668651_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.08.05.668752_v1,10.1101/2025.08.05.668752,Vitamin B2 metabolism promotes FSP1 stability to prevent ferroptosis,v1,2025-08-05,Cell Biology,Nature Structural & Molecular Biology,10.1038/s41594-026-01759-x,2026-03,48,6.187,6.42,extracted_data/August_2025/10.1101_2025.08.05.668752_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.08.22.671725_v1,10.1101/2025.08.22.671725,Linking Kinetochore Attachment to Checkpoint Control: The Role of Aurora B in BubR1 Acetylation,v1,2025-08-22,Cell Biology,Nucleic Acids Research,10.1093/nar/gkaf1517,2026-01-14,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.22.671725_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.08.25.672082_v1,10.1101/2025.08.25.672082,Capturing trophectoderm-like stem cells enables step-wisely remodeling of placental development,v1,2025-08-25,Cell Biology,Protein & Cell,10.1093/procel/pwaf098,2025-11-10,60,5.392,7.91,extracted_data/August_2025/10.1101_2025.08.25.672082_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.08.26.672263_v1,10.1101/2025.08.26.672263,β-Catenin condensation facilitates clustering of the cadherin/catenin complex and formation of nascent cell-cell junctions,v1,2025-08-26,Cell Biology,Nature Communications,10.1038/s41467-025-66984-2,2025-12-06,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.08.26.672263_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.09.01.673389_v1,10.1101/2025.09.01.673389,An Inflammatory and Quiescent HSC Subpopulation Expands with Age in Humans,v1,2025-09-01,Cell Biology,Genome Biology,10.1186/s13059-026-03936-z,2026-01-16,53,5.710,9.04,extracted_data/September_2025/10.1101_2025.09.01.673389_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.09.09.674576_v1,10.1101/2025.09.09.674576,Deep Mutational Scanning of FDX1 Identifies Key Structural Determinants of Lipoylation and Cuproptosis,v1,2025-09-09,Cell Biology,Nature Communications,10.1038/s41467-025-67869-0,2025-12-21,71,4.761,14.63,extracted_data/September_2025/10.1101_2025.09.09.674576_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.09.17.676856_v1,10.1101/2025.09.17.676856,AURKB-driven dissolution of CIZ1-RNA assemblies from the inactive X chromosome in mitosis,v1,2025-09-17,Cell Biology,Nucleic Acids Research,10.1093/nar/gkag018,2026-01-22,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.17.676856_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.09.24.678297_v1,10.1101/2025.09.24.678297,Negative feedback regulation of the hemi-arrestin MAPK scaffold Sms1 prevents untimely mating,v1,2025-09-24,Cell Biology,Nature Communications,10.1038/s41467-026-70631-9,2026-03-17,71,4.761,14.63,extracted_data/September_2025/10.1101_2025.09.24.678297_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.10.05.680587_v1,10.1101/2025.10.05.680587,Dual pathways via CENP-C and Mis18C recruit HJURP for CENP-A deposition into vertebrate centromeres,v1,2025-10-05,Cell Biology,The EMBO Journal,10.1038/s44318-025-00674-z,2026-01-08,68,4.821,7.14,extracted_data/October_2025/10.1101_2025.10.05.680587_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.10.06.680693_v1,10.1101/2025.10.06.680693,Structural remodeling of the mitochondrial protein biogenesis machinery under proteostatic stress,v1,2025-10-06,Cell Biology,Science Advances,10.1126/sciadv.aed3579,2026-03-06,79,4.324,12.06,extracted_data/October_2025/10.1101_2025.10.06.680693_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.10.09.681386_v1,10.1101/2025.10.09.681386,Global re-organisation of genome architecture at the transition to gametogenesis,v1,2025-10-09,Cell Biology,Nature Structural & Molecular Biology,10.1038/s41594-026-01747-1,2026-03,48,6.187,6.42,extracted_data/October_2025/10.1101_2025.10.09.681386_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.1101_2025.11.12.687999_v1,10.1101/2025.11.12.687999,Tumor cell-specific loss of GPX4 reprograms triacylglycerol metabolism to escape ferroptosis and impair antitumor immunity in NSCLC,v1,2025-11-12,Cell Biology,Protein & Cell,10.1093/procel/pwaf101,2025-11-19,60,5.392,7.91,extracted_data/November_2025/10.1101_2025.11.12.687999_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.64898_2025.12.12.693977_v2,10.64898/2025.12.12.693977,Membrane-associated periodic skeleton regulates major forms of endocytosis in neurons through a signaling-driven positive feedback loop,v2,2025-12-12,Cell Biology,Science Advances,10.1126/sciadv.aeb0803,2026-02-13,79,4.324,12.06,extracted_data/January_2026/10.64898_2025.12.12.693977_v2.xml,top100_bgm_multi_journals.csv
cell_biology,10.64898_2025.12.25.696450_v1,10.64898/2025.12.25.696450,The natural flavonoid dihydromyricetin targets senescent cells via PRDX2 and alleviates age-related diseases,v1,2025-12-25,Cell Biology,Nature Communications,10.1038/s41467-026-70302-9,2026-03-06,71,4.761,14.63,extracted_data/December_2025/10.64898_2025.12.25.696450_v1.xml,top100_bgm_multi_journals.csv
cell_biology,10.64898_2026.01.07.697614_v1,10.64898/2026.01.07.697614,Asymmetric Division in a Two-Cell-Like State Rejuvenates Embryonic Stem Cells,v1,2026-01-07,Cell Biology,Cell Research,10.1038/s41422-026-01221-z,2026-02-03,27,8.740,9.06,extracted_data/January_2026/10.64898_2026.01.07.697614_v1.xml,top100_bgm_multi_journals.csv
ecology_agbio,10.1101_2024.10.02.616230_v1,10.1101/2024.10.02.616230,Metabolic growth mechanisms and theoretical growth potential of global woody plant communities,v1,2024-10-02,Ecology,Ecological Monographs,10.1002/ecm.70048,2026-02,33,3.383,9.43,extracted_data/October_2024/10.1101_2024.10.02.616230_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.04.616616_v1,10.1101/2024.10.04.616616,Soil pH influences the composition of bacteriophage communities infecting individual hosts,v1,2024-10-04,Ecology,Soil Biology and Biochemistry,10.1016/j.soilbio.2025.109948,2025-11,21,3.982,11.87,extracted_data/October_2024/10.1101_2024.10.04.616616_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.05.616733_v1,10.1101/2024.10.05.616733,Land-use changes impact root-fungal network connectivity in a global biodiversity hotspot,v1,2024-10-05,Ecology,Journal of Ecology,10.1111/1365-2745.70020,2025-05,61,2.422,5.89,extracted_data/October_2024/10.1101_2024.10.05.616733_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.10.617505_v1,10.1101/2024.10.10.617505,PhenoVision: A framework for automating and delivering research-ready plant phenology data from field images,v1,2024-10-10,Ecology,Methods in Ecology and Evolution,10.1111/2041-210X.70081,2025-08,39,2.945,6.64,extracted_data/October_2024/10.1101_2024.10.10.617505_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.13.618084_v1,10.1101/2024.10.13.618084,General purpose genotypes and evolution of higher plasticity in clonality underlie knotweed invasion,v1,2024-10-13,Ecology,New Phytologist,10.1111/nph.20452,2025-04,36,3.293,8.18,extracted_data/October_2024/10.1101_2024.10.13.618084_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.15.618162_v1,10.1101/2024.10.15.618162,Are protected areas tracking threats to terrestrial biodiversity?,v1,2024-10-15,Ecology,Conservation Biology,10.1111/cobi.70086,2025-12,71,2.222,5.57,extracted_data/October_2024/10.1101_2024.10.15.618162_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.15.618388_v1,10.1101/2024.10.15.618388,14C-age of carbon used to grow fine roots reflects tree carbon status,v1,2024-10-15,Ecology,"Plant, Cell & Environment",10.1111/pce.70154,2025-12,76,2.150,7.07,extracted_data/October_2024/10.1101_2024.10.15.618388_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.17.618912_v1,10.1101/2024.10.17.618912,Spatial and seasonal biodiversity variation in a large Mediterranean lagoon using environmental DNA metabarcoding through sponge tissue collection,v1,2024-10-17,Ecology,Environmental DNA,10.1002/edn3.70129,2025-05,95,1.904,5.89,extracted_data/October_2024/10.1101_2024.10.17.618912_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.18.619094_v2,10.1101/2024.10.18.619094,deadtrees.earth - An Open-Access and Interactive Database for Centimeter-Scale Aerial Imagery to Uncover Global Tree Mortality Dynamics,v2,2024-10-18,Ecology,Remote Sensing of Environment,10.1016/j.rse.2025.115027,2026-01,23,3.972,12.66,extracted_data/October_2024/10.1101_2024.10.18.619094_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.20.619283_v1,10.1101/2024.10.20.619283,Hijacking and Integration of Algal Plastids and Mitochondria in a Polar Planktonic Host,v1,2024-10-20,Ecology,Current Biology,10.1016/j.cub.2025.03.076,2025-06,48,2.707,4.50,extracted_data/October_2024/10.1101_2024.10.20.619283_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.22.619402_v1,10.1101/2024.10.22.619402,Degradation of fish food webs in the anthropocene,v1,2024-10-22,Ecology,Science Advances,10.1126/sciadv.adu6540,2026-02-20,17,4.324,12.06,extracted_data/October_2024/10.1101_2024.10.22.619402_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.22.619565_v1,10.1101/2024.10.22.619565,"Impact of land-use intensity, productivity, and aboveground richness on seed rain in temperate grasslands",v1,2024-10-22,Ecology,"Agriculture, Ecosystems & Environment",10.1016/j.agee.2025.109690,2025-09,91,1.946,7.38,extracted_data/October_2024/10.1101_2024.10.22.619565_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.23.619911_v1,10.1101/2024.10.23.619911,Soil microbes influence the ecology and evolution of plant plasticity,v1,2024-10-23,Ecology,New Phytologist,10.1111/nph.20383,2025-03,36,3.293,8.18,extracted_data/October_2024/10.1101_2024.10.23.619911_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.10.31.621260_v2,10.1101/2024.10.31.621260,"Quantifying the success of prey crypsis, aposematism and evasiveness in avoiding predators’ attack",v2,2024-10-31,Ecology,Ecology,10.1002/ecy.70248,2025-11,84,2.040,3.91,extracted_data/January_2025/10.1101_2024.10.31.621260_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.03.621788_v1,10.1101/2024.11.03.621788,EEMtoolbox: A user-friendly R package for flexible ensemble ecosystem modeling,v1,2024-11-03,Ecology,Methods in Ecology and Evolution,10.1111/2041-210X.70032,2025-05,39,2.945,6.64,extracted_data/November_2024/10.1101_2024.11.03.621788_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.04.621791_v3,10.1101/2024.11.04.621791,Substrate utilization and cross-feeding synergistically determine microbiome resistance to pathogen invasion,v3,2024-11-04,Ecology,Nature Ecology & Evolution,10.1038/s41559-025-02908-z,2025-11-21,16,4.357,7.77,extracted_data/March_2025/10.1101_2024.11.04.621791_v3.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.04.621899_v1,10.1101/2024.11.04.621899,Moisture and competition constrain ephemeral resource quality for burying beetle reproduction,v1,2024-11-04,Ecology,Ecology,10.1002/ecy.70127,2025-06,84,2.040,3.91,extracted_data/November_2024/10.1101_2024.11.04.621899_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.06.622256_v1,10.1101/2024.11.06.622256,Community conservatism is widespread throughout microbial phyla and environments,v1,2024-11-06,Ecology,Nature Ecology & Evolution,10.1038/s41559-025-02957-4,2026-01-16,16,4.357,7.77,extracted_data/November_2024/10.1101_2024.11.06.622256_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.14.623536_v1,10.1101/2024.11.14.623536,Unravelling the universal spatial properties of coral reefs,v1,2024-11-14,Ecology,Global Ecology and Biogeography,10.1111/geb.13939,2025-01,53,2.603,6.20,extracted_data/November_2024/10.1101_2024.11.14.623536_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.18.623932_v1,10.1101/2024.11.18.623932,ILSM: A package for analyzing the interconnection structure of tripartite interaction networks,v1,2024-11-18,Ecology,Ecography,10.1002/ecog.07823,2025-11,56,2.540,5.84,extracted_data/November_2024/10.1101_2024.11.18.623932_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.20.624379_v2,10.1101/2024.11.20.624379,"Home range spillover in habitats with impassable boundaries: Causes, biases, and corrections using autocorrelated kernel density estimation",v2,2024-11-20,Ecology,Methods in Ecology and Evolution,10.1111/2041-210X.70082,2025-12,39,2.945,6.64,extracted_data/December_2024/10.1101_2024.11.20.624379_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.21.624778_v1,10.1101/2024.11.21.624778,The sicker sex is plastic: Thermal plasticity determines sex biases in pathogen transmission,v1,2024-11-21,Ecology,Ecology,10.1002/ecy.70259,2025-11,84,2.040,3.91,extracted_data/November_2024/10.1101_2024.11.21.624778_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.22.624877_v3,10.1101/2024.11.22.624877,Pairwise interactions and serial bottlenecks help explain species composition in a multi-species microbial community,v3,2024-11-22,Ecology,Ecology,10.1002/ecy.70284,2026-01,84,2.040,3.91,extracted_data/June_2025/10.1101_2024.11.22.624877_v3.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.26.625370_v1,10.1101/2024.11.26.625370,Flowers that cool themselves: thermal ecology of summer-blooming thistles in hot Mediterranean environments,v1,2024-11-26,Ecology,Ecological Monographs,10.1002/ecm.70007,2025-02,33,3.383,9.43,extracted_data/November_2024/10.1101_2024.11.26.625370_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.26.625449_v1,10.1101/2024.11.26.625449,pnetr: An R package for the PnET family of forest ecosystem models,v1,2024-11-26,Ecology,Methods in Ecology and Evolution,10.1111/2041-210X.70076,2025-07,39,2.945,6.64,extracted_data/November_2024/10.1101_2024.11.26.625449_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.11.30.626152_v1,10.1101/2024.11.30.626152,Detection of eco-evolutionary dynamics in communities using Joint Species Distribution Models,v1,2024-11-30,Ecology,Ecology Letters,10.1111/ele.70270,2026-01,24,3.905,8.40,extracted_data/December_2024/10.1101_2024.11.30.626152_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.12.09.627503_v1,10.1101/2024.12.09.627503,Tensions in tillage: Reduction in tillage intensity associates with lower wheat growth and nutritional grain quality despite enhanced soil biological indicators,v1,2024-12-09,Ecology,"Agriculture, Ecosystems & Environment",10.1016/j.agee.2025.109675,2025-09,91,1.946,7.38,extracted_data/December_2024/10.1101_2024.12.09.627503_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.12.10.627088_v1,10.1101/2024.12.10.627088,"Targeting terrestrial vertebrates with eDNA: Trends, perspectives, and considerations for sampling",v1,2024-12-10,Ecology,Environmental DNA,10.1002/edn3.70056,2025-01,95,1.904,5.89,extracted_data/December_2024/10.1101_2024.12.10.627088_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.12.12.628216_v1,10.1101/2024.12.12.628216,Harnessing Environmental DNA (eDNA) to Explore Frugivorous Interactions: A Case Study in Papaya (Carica papaya) and Pineapple (Ananas comosus),v1,2024-12-12,Ecology,Environmental DNA,10.1002/edn3.70196,2025-09,95,1.904,5.89,extracted_data/December_2024/10.1101_2024.12.12.628216_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.12.13.627895_v2,10.1101/2024.12.13.627895,Future climate and land use change will equally impact global terrestrial vertebrate diversity,v2,2024-12-13,Ecology,Global Ecology and Biogeography,10.1111/geb.70161,2026-01,53,2.603,6.20,extracted_data/June_2025/10.1101_2024.12.13.627895_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.12.16.628632_v1,10.1101/2024.12.16.628632,Optimizing fungicide deployment in a connected crop landscape while balancing epidemic control and environmental sustainability,v1,2024-12-16,Ecology,"Agriculture, Ecosystems & Environment",10.1016/j.agee.2025.109722,2025-10,91,1.946,7.38,extracted_data/January_2025/10.1101_2024.12.16.628632_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.12.17.628643_v1,10.1101/2024.12.17.628643,Improving whole biodiversity monitoring and discovery with environmental DNA metagenomics,v1,2024-12-17,Ecology,Molecular Ecology Resources,10.1111/1755-0998.14105,2025-08,68,2.281,5.78,extracted_data/December_2024/10.1101_2024.12.17.628643_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.12.17.628855_v2,10.1101/2024.12.17.628855,Silent reservoirs are shaping the emergence of Usutu virus,v2,2024-12-17,Ecology,Nature Ecology & Evolution,10.1038/s41559-025-02973-4,2026-03-03,16,4.357,7.77,extracted_data/December_2025/10.1101_2024.12.17.628855_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.12.19.629491_v1,10.1101/2024.12.19.629491,Order matters: Autocorrelation of temperature dictates extinction risk in populations with nonlinear thermal performance,v1,2024-12-19,Ecology,Ecology,10.1002/ecy.70325,2026-03,84,2.040,3.91,extracted_data/January_2025/10.1101_2024.12.19.629491_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2024.12.28.630628_v2,10.1101/2024.12.28.630628,Leveraging machine learning and accelerometry to classify animal behaviours with uncertainty,v2,2024-12-28,Ecology,Methods in Ecology and Evolution,10.1111/2041-210x.70206,2026-02,39,2.945,6.64,extracted_data/October_2025/10.1101_2024.12.28.630628_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.02.630023_v1,10.1101/2025.01.02.630023,Halting predicted vertebrate declines requires tackling multiple drivers of biodiversity loss,v1,2025-01-02,Ecology,Science Advances,10.1126/sciadv.adx7973,2026-02-13,17,4.324,12.06,extracted_data/January_2025/10.1101_2025.01.02.630023_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.02.631106_v1,10.1101/2025.01.02.631106,"Prairie management practices influence biodiversity, productivity and surface-atmosphere feedbacks",v1,2025-01-02,Ecology,New Phytologist,10.1111/nph.70195,2025-07,36,3.293,8.18,extracted_data/January_2025/10.1101_2025.01.02.631106_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.07.631661_v1,10.1101/2025.01.07.631661,Contrasting dynamics and biotic association networks in estuarine microbenthic communities along an environmental disturbance gradient,v1,2025-01-07,Ecology,Environmental DNA,10.1002/edn3.70171,2025-07,95,1.904,5.89,extracted_data/January_2025/10.1101_2025.01.07.631661_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.07.631804_v3,10.1101/2025.01.07.631804,Nonlinear effects of temperature on mosquito parasite infection across a large geographic climate gradient,v3,2025-01-07,Ecology,Ecology,10.1002/ecy.70307,2026-02,84,2.040,3.91,extracted_data/December_2025/10.1101_2025.01.07.631804_v3.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.09.632120_v1,10.1101/2025.01.09.632120,Threat reduction must be coupled with targeted recovery programmes to conserve global bird diversity,v1,2025-01-09,Ecology,Nature Ecology & Evolution,10.1038/s41559-025-02746-z,2025-06-24,16,4.357,7.77,extracted_data/January_2025/10.1101_2025.01.09.632120_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.10.632321_v1,10.1101/2025.01.10.632321,Phenological turnover matters when making trait-based predictions of plant-pollinator interactions,v1,2025-01-10,Ecology,Functional Ecology,10.1111/1365-2435.70113,2025-09,93,1.936,5.34,extracted_data/January_2025/10.1101_2025.01.10.632321_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.10.632357_v2,10.1101/2025.01.10.632357,Tracking the phenology of riverine insect communities using environmental DNA,v2,2025-01-10,Ecology,Environmental DNA,10.1002/edn3.70249,2026-01,95,1.904,5.89,extracted_data/April_2025/10.1101_2025.01.10.632357_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.14.632904_v2,10.1101/2025.01.14.632904,Not Extremely Plastic: Testing the Limits of Morphological Plasticity in Fungal Mycelia in Response to Soil Grazers,v2,2025-01-14,Ecology,Ecology Letters,10.1111/ele.70281,2025-12,24,3.905,8.40,extracted_data/May_2025/10.1101_2025.01.14.632904_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.15.633202_v1,10.1101/2025.01.15.633202,Land-use change undermines the stability of avian functional diversity,v1,2025-01-15,Ecology,Nature,10.1038/s41586-025-09788-0,2026-01-08,1,18.288,18.47,extracted_data/January_2025/10.1101_2025.01.15.633202_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.16.633254_v1,10.1101/2025.01.16.633254,Hard-to-sample species are more sensitive to land-use change: implications for global biodiversity metrics,v1,2025-01-16,Ecology,Global Ecology and Biogeography,10.1111/geb.70170,2025-12,53,2.603,6.20,extracted_data/January_2025/10.1101_2025.01.16.633254_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.23.634630_v1,10.1101/2025.01.23.634630,Assessing predictive accuracy of species abundance models in dynamic systems,v1,2025-01-23,Ecology,Methods in Ecology and Evolution,10.1111/2041-210X.70105,2025-09,39,2.945,6.64,extracted_data/January_2025/10.1101_2025.01.23.634630_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.01.30.634607_v2,10.1101/2025.01.30.634607,Short-term management of kelp forests for marine heatwaves requires planning,v2,2025-01-30,Ecology,Conservation Letters,10.1111/conl.13130,2025-07,62,2.405,6.86,extracted_data/June_2025/10.1101_2025.01.30.634607_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.05.636251_v3,10.1101/2025.02.05.636251,Life history evolution of insects in response to climate variation: seasonal timing versus thermal physiology,v3,2025-02-05,Ecology,Annual Review of Entomology,10.1146/annurev-ento-121423-013506,2026-01-28,14,4.655,16.98,extracted_data/July_2025/10.1101_2025.02.05.636251_v3.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.06.636806_v1,10.1101/2025.02.06.636806,"Soil protist diversity enhances prokaryotic diversity, and regulates dominant prokaryotes and the abundance of key nitrogen cycling genes",v1,2025-02-06,Ecology,Soil Biology and Biochemistry,10.1016/j.soilbio.2025.110014,2026-01,21,3.982,11.87,extracted_data/February_2025/10.1101_2025.02.06.636806_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.08.637226_v1,10.1101/2025.02.08.637226,Community-level plant functional strategies explain ecosystem carbon storage across a tropical elevational gradient,v1,2025-02-08,Ecology,Journal of Ecology,10.1111/1365-2745.70162,2025-11,61,2.422,5.89,extracted_data/February_2025/10.1101_2025.02.08.637226_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.09.637279_v3,10.1101/2025.02.09.637279,The range-resident logistic model: a new framework to formalize the population-dynamics consequences of range residency,v3,2025-02-09,Ecology,Ecology Letters,10.1111/ele.70269,2025-12,24,3.905,8.40,extracted_data/October_2025/10.1101_2025.02.09.637279_v3.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.11.636978_v1,10.1101/2025.02.11.636978,Neighbor density-dependent facilitation promotes coexistence and internal oscillation,v1,2025-02-11,Ecology,Ecological Monographs,10.1002/ecm.70040,2025-11,33,3.383,9.43,extracted_data/February_2025/10.1101_2025.02.11.636978_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.13.638042_v1,10.1101/2025.02.13.638042,Animal tracking with particle algorithms for conservation,v1,2025-02-13,Ecology,Science Advances,10.1126/sciadv.adx0255,2025-11-28,17,4.324,12.06,extracted_data/February_2025/10.1101_2025.02.13.638042_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.13.638055_v1,10.1101/2025.02.13.638055,Predicting animal movement with deepSSF: a deep learning step selection framework,v1,2025-02-13,Ecology,Methods in Ecology and Evolution,10.1111/2041-210x.70136,2026-02,39,2.945,6.64,extracted_data/February_2025/10.1101_2025.02.13.638055_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.21.638895_v1,10.1101/2025.02.21.638895,Using aerial thermography to map terrestrial thermal environments in unprecedented detail,v1,2025-02-21,Ecology,Methods in Ecology and Evolution,10.1111/2041-210X.70096,2025-08,39,2.945,6.64,extracted_data/February_2025/10.1101_2025.02.21.638895_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.24.639859_v2,10.1101/2025.02.24.639859,Powerful flowers: Public perception of grassland aesthetics is strongly related to management and biodiversity,v2,2025-02-24,Ecology,"Agriculture, Ecosystems & Environment",10.1016/j.agee.2025.110111,2026-03,91,1.946,7.38,extracted_data/March_2025/10.1101_2025.02.24.639859_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.24.639912_v1,10.1101/2025.02.24.639912,Squash flowers as microhabitats: the effects of floral temperature and humidity on pollen viability and visitor behavior,v1,2025-02-24,Ecology,Current Biology,10.1016/j.cub.2025.08.039,2025-10,48,2.707,4.50,extracted_data/February_2025/10.1101_2025.02.24.639912_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.02.26.640397_v2,10.1101/2025.02.26.640397,Elusive tropical forest canopy diversity revealed through environmental DNA contained in rainwater,v2,2025-02-26,Ecology,Science Advances,10.1126/sciadv.adx4909,2025-08-15,17,4.324,12.06,extracted_data/March_2025/10.1101_2025.02.26.640397_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.05.641195_v1,10.1101/2025.03.05.641195,Advancing the global statistical standard for urban ecosystem accounts,v1,2025-03-05,Ecology,Ecosystem Services,10.1016/j.ecoser.2025.101804,2026-02,82,2.065,7.58,extracted_data/March_2025/10.1101_2025.03.05.641195_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.06.641759_v1,10.1101/2025.03.06.641759,Significant improvement of environmental DNA assay by targeting retrotransposon sequences characteristic to Anguilla eels,v1,2025-03-06,Ecology,Environmental DNA,10.1002/edn3.70197,2025-09,95,1.904,5.89,extracted_data/March_2025/10.1101_2025.03.06.641759_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.07.642014_v2,10.1101/2025.03.07.642014,Biodiversity modulates the cross-community scaling relationship in changing environments,v2,2025-03-07,Ecology,Ecology Letters,10.1111/ele.70208,2025-09,24,3.905,8.40,extracted_data/June_2025/10.1101_2025.03.07.642014_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.11.641853_v1,10.1101/2025.03.11.641853,Delayed recovery of seed-dispersal interactions after deforestation,v1,2025-03-11,Ecology,Current Biology,10.1016/j.cub.2025.08.070,2025-10,48,2.707,4.50,extracted_data/March_2025/10.1101_2025.03.11.641853_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.13.642835_v1,10.1101/2025.03.13.642835,The fingerprint of functional strategies in Mediterranean seagrass fish assemblages,v1,2025-03-13,Ecology,Functional Ecology,10.1111/1365-2435.70070,2025-07,93,1.936,5.34,extracted_data/March_2025/10.1101_2025.03.13.642835_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.15.643429_v1,10.1101/2025.03.15.643429,Do sun orchids mimic buzz-pollinated plants? An experimental test of the adaptive significance of false anthers,v1,2025-03-15,Ecology,Functional Ecology,10.1111/1365-2435.70129,2025-10,93,1.936,5.34,extracted_data/March_2025/10.1101_2025.03.15.643429_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.15.643440_v1,10.1101/2025.03.15.643440,MoveTraits – A database for integrating animal behaviour into trait-based ecology,v1,2025-03-15,Ecology,Ecology Letters,10.1111/ele.70297,2026-01,24,3.905,8.40,extracted_data/March_2025/10.1101_2025.03.15.643440_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.18.643874_v1,10.1101/2025.03.18.643874,"Annual Cultivated Extent and Agricultural Land Use Expansion across the Central Grasslands of North America, 1996-2021",v1,2025-03-18,Ecology,Ecological Indicators,10.1016/j.ecolind.2025.113968,2025-09,89,1.959,8.53,extracted_data/March_2025/10.1101_2025.03.18.643874_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.19.644085_v2,10.1101/2025.03.19.644085,Projecting spatiotemporal bioclimatic niche dynamics of endemic Pyrenean plant species under climate change: how much will we lose?,v2,2025-03-19,Ecology,Ecography,10.1002/ecog.08067,2026-01,56,2.540,5.84,extracted_data/October_2025/10.1101_2025.03.19.644085_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.23.643993_v1,10.1101/2025.03.23.643993,Shining a light on daytime coral spawning synchrony across oceans,v1,2025-03-23,Ecology,Global Ecology and Biogeography,10.1111/geb.70072,2025-07,53,2.603,6.20,extracted_data/March_2025/10.1101_2025.03.23.643993_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.24.644970_v1,10.1101/2025.03.24.644970,Individualised niches in a variable environment – Consequences for environmental change responses,v1,2025-03-24,Ecology,Methods in Ecology and Evolution,10.1111/2041-210x.70263,2026-04,39,2.945,6.64,extracted_data/March_2025/10.1101_2025.03.24.644970_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.25.645239_v1,10.1101/2025.03.25.645239,Acoustic indices predict recovery of tropical bird communities for taxonomic and functional composition,v1,2025-03-25,Ecology,Conservation Letters,10.1111/conl.13131,2025-07,62,2.405,6.86,extracted_data/March_2025/10.1101_2025.03.25.645239_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.28.645897_v1,10.1101/2025.03.28.645897,A novel protistan trait database reveals functional redundancy and complementarity in terrestrial protists (Amoebozoa & Rhizaria),v1,2025-03-28,Ecology,Molecular Ecology Resources,10.1111/1755-0998.70064,2026-01,68,2.281,5.78,extracted_data/April_2025/10.1101_2025.03.28.645897_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.28.646055_v1,10.1101/2025.03.28.646055,Proactive Coral Reef Restoration Using Thermally Tolerant Corals in Hawai‘i,v1,2025-03-28,Ecology,Conservation Letters,10.1111/con4.70004,2026-01,62,2.405,6.86,extracted_data/April_2025/10.1101_2025.03.28.646055_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.29.646071_v1,10.1101/2025.03.29.646071,Lotka-Volterra Dynamics Facilitate Sustainable Biocontrol of Wastewater Sludge Bulking,v1,2025-03-29,Ecology,The ISME Journal,10.1093/ismejo/wraf235,2025-01-02,22,3.973,10.15,extracted_data/April_2025/10.1101_2025.03.29.646071_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.03.31.645977_v1,10.1101/2025.03.31.645977,Advancing ecological assessment: The integration of eDNA metabarcoding into an estuarine fish index,v1,2025-03-31,Ecology,Ecological Indicators,10.1016/j.ecolind.2025.114464,2025-12,89,1.959,8.53,extracted_data/April_2025/10.1101_2025.03.31.645977_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.04.02.646737_v1,10.1101/2025.04.02.646737,Application of environmental DNA-based assessment for upstream-downstream comparison of river macroinvertebrates in a metal-contaminated river,v1,2025-04-02,Ecology,Environmental DNA,10.1002/edn3.70200,2025-09,95,1.904,5.89,extracted_data/April_2025/10.1101_2025.04.02.646737_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.04.03.647025_v1,10.1101/2025.04.03.647025,Flexible Methods for Species Distribution Modeling with Small Samples,v1,2025-04-03,Ecology,Ecography,10.1002/ecog.08112,2026-02,56,2.540,5.84,extracted_data/April_2025/10.1101_2025.04.03.647025_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.04.07.647698_v1,10.1101/2025.04.07.647698,Omnivorous diets of sympatric duck species in a subtropical East Asia wetland unveiled by multi-marker DNA metabarcoding,v1,2025-04-07,Ecology,Environmental DNA,10.1002/edn3.70210,2025-09,95,1.904,5.89,extracted_data/April_2025/10.1101_2025.04.07.647698_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.04.08.647223_v1,10.1101/2025.04.08.647223,A General Method for Detection and Segmentation of Terrestrial Arthropods in Images,v1,2025-04-08,Ecology,Methods in Ecology and Evolution,10.1111/2041-210x.70249,2026-03,39,2.945,6.64,extracted_data/April_2025/10.1101_2025.04.08.647223_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.04.09.648035_v2,10.1101/2025.04.09.648035,Earlier snowmelt increases the strength of the carbon sink in montane meadows unequally across the growing season,v2,2025-04-09,Ecology,Journal of Ecology,10.1111/1365-2745.70195,2025-12,61,2.422,5.89,extracted_data/August_2025/10.1101_2025.04.09.648035_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.04.16.649107_v1,10.1101/2025.04.16.649107,Legacy of the lost and pressure of the present: Malagasy plant seeds retain megafauna dispersal signatures but downsize under human footprint,v1,2025-04-16,Ecology,Ecology Letters,10.1111/ele.70205,2025-09,24,3.905,8.40,extracted_data/April_2025/10.1101_2025.04.16.649107_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.04.17.649222_v1,10.1101/2025.04.17.649222,Innovative airborne DNA approach for monitoring honey bee foraging and health,v1,2025-04-17,Ecology,Environmental DNA,10.1002/edn3.70150,2025-07,95,1.904,5.89,extracted_data/April_2025/10.1101_2025.04.17.649222_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.04.22.649899_v2,10.1101/2025.04.22.649899,Multispecies coexistence emerges from pairwise exclusions in communities with competitive hierarchy,v2,2025-04-22,Ecology,Ecology Letters,10.1111/ele.70206,2025-09,24,3.905,8.40,extracted_data/August_2025/10.1101_2025.04.22.649899_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.04.24.650406_v1,10.1101/2025.04.24.650406,"Tree Growth, Contraction, and Recovery: Disentangling Soil and Atmospheric Drought Effects",v1,2025-04-24,Ecology,"Plant, Cell & Environment",10.1111/pce.15604,2025-09,76,2.150,7.07,extracted_data/April_2025/10.1101_2025.04.24.650406_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.05.01.651649_v1,10.1101/2025.05.01.651649,Contrasted effects of human pressure on biodiversity in the UK: a multi-taxonomic assessment using airborne environmental DNA,v1,2025-05-01,Ecology,Ecography,10.1002/ecog.08196,2025-12,56,2.540,5.84,extracted_data/May_2025/10.1101_2025.05.01.651649_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.05.07.652594_v1,10.1101/2025.05.07.652594,Shifting baselines increase the risk of misinterpreting biodiversity trends,v1,2025-05-07,Ecology,Ecography,10.1002/ecog.08363,2026-04,56,2.540,5.84,extracted_data/May_2025/10.1101_2025.05.07.652594_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.05.13.649340_v2,10.1101/2025.05.13.649340,Sensitive environmental DNA methods for low-risk surveillance of at-risk bumble bees,v2,2025-05-13,Ecology,Molecular Ecology Resources,10.1111/1755-0998.70073,2026-01,68,2.281,5.78,extracted_data/August_2025/10.1101_2025.05.13.649340_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.05.13.653675_v1,10.1101/2025.05.13.653675,Lightning-caused disturbance frequency and severity varies with topography in an Afromontane forest,v1,2025-05-13,Ecology,Journal of Ecology,10.1111/1365-2745.70278,2026-03,61,2.422,5.89,extracted_data/May_2025/10.1101_2025.05.13.653675_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.05.14.654148_v1,10.1101/2025.05.14.654148,A nonequilibrium framework for community responses to pulse perturbations,v1,2025-05-14,Ecology,Ecology Letters,10.1111/ele.70313,2026-01,24,3.905,8.40,extracted_data/May_2025/10.1101_2025.05.14.654148_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.05.29.656837_v1,10.1101/2025.05.29.656837,Solving three core challenges in transient dynamics analysis of matrix population models,v1,2025-05-29,Ecology,Methods in Ecology and Evolution,10.1111/2041-210X.70139,2025-10,39,2.945,6.64,extracted_data/June_2025/10.1101_2025.05.29.656837_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.05.31.656892_v1,10.1101/2025.05.31.656892,Simulation-based spatially explicit close-kin mark-recapture,v1,2025-05-31,Ecology,Molecular Ecology Resources,10.1111/1755-0998.70074,2026-01,68,2.281,5.78,extracted_data/June_2025/10.1101_2025.05.31.656892_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.06.18.660323_v1,10.1101/2025.06.18.660323,DNA virus–host patterns in lake and marine environments over the last glacial cycle,v1,2025-06-18,Ecology,The ISME Journal,10.1093/ismejo/wrag025,2026-01-14,22,3.973,10.15,extracted_data/June_2025/10.1101_2025.06.18.660323_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.06.24.661187_v1,10.1101/2025.06.24.661187,Noninvasive reconstruction of complete mitochondrial genomes from aquatic environmental DNA using PCR-free long-read sequencing,v1,2025-06-24,Ecology,Methods in Ecology and Evolution,10.1111/2041-210x.70209,2026-01,39,2.945,6.64,extracted_data/June_2025/10.1101_2025.06.24.661187_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.07.10.664094_v4,10.1101/2025.07.10.664094,Reactive oxygen species trigger downward vertical migration in diatom microphytobenthic biofilms as a strategy to cope with oxidative stress,v4,2025-07-10,Ecology,The ISME Journal,10.1093/ismejo/wrag034,2026-01-14,22,3.973,10.15,extracted_data/February_2026/10.1101_2025.07.10.664094_v4.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.07.14.664628_v2,10.1101/2025.07.14.664628,Data-Driven Discovery of Mechanistic Ecosystem Models with LLMs,v2,2025-07-14,Ecology,Methods in Ecology and Evolution,10.1111/2041-210x.70244,2026-04,39,2.945,6.64,extracted_data/November_2025/10.1101_2025.07.14.664628_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.07.15.664849_v2,10.1101/2025.07.15.664849,Paying Attention to Other Animal Detections Improves Camera Trap Classification Models,v2,2025-07-15,Ecology,Methods in Ecology and Evolution,10.1111/2041-210x.70260,2026-04,39,2.945,6.64,extracted_data/December_2025/10.1101_2025.07.15.664849_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.07.25.666799_v1,10.1101/2025.07.25.666799,Microbial community regulation of extracellular enzyme production can mediate patterns of particulate and mineral-associated organic matter accumulation in undersaturated soils,v1,2025-07-25,Ecology,Soil Biology and Biochemistry,10.1016/j.soilbio.2025.110056,2026-03,21,3.982,11.87,extracted_data/July_2025/10.1101_2025.07.25.666799_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.07.28.667229_v2,10.1101/2025.07.28.667229,Density dependence promotes species coexistence and provides a unifying explanation for distinct productivity-diversity relationships,v2,2025-07-28,Ecology,Ecology Letters,10.1111/ele.70292,2025-12,24,3.905,8.40,extracted_data/October_2025/10.1101_2025.07.28.667229_v2.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.08.12.669982_v3,10.1101/2025.08.12.669982,Contrasting ecological communities in rice paddy fields under conventional and no-fertilizer farming practices,v3,2025-08-12,Ecology,"Agriculture, Ecosystems & Environment",10.1016/j.agee.2025.110066,2026-02,91,1.946,7.38,extracted_data/October_2025/10.1101_2025.08.12.669982_v3.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.08.13.670161_v1,10.1101/2025.08.13.670161,Context matters: A meta-analysis of the variable impact of transgenerational and developmental plasticity on responses to stress,v1,2025-08-13,Ecology,Functional Ecology,10.1111/1365-2435.70168,2025-11,93,1.936,5.34,extracted_data/August_2025/10.1101_2025.08.13.670161_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.09.18.677176_v1,10.1101/2025.09.18.677176,Fisheries trade and blue nutrient flows in Pacific Island Countries,v1,2025-09-18,Ecology,Fish and Fisheries,10.1111/faf.70062,2026-05,75,2.153,6.56,extracted_data/September_2025/10.1101_2025.09.18.677176_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.09.19.677312_v1,10.1101/2025.09.19.677312,Animal geolocation with convolution algorithms in Julia and R via Wahoo.jl,v1,2025-09-19,Ecology,Methods in Ecology and Evolution,10.1111/2041-210x.70185,2026-02,39,2.945,6.64,extracted_data/September_2025/10.1101_2025.09.19.677312_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.09.24.678290_v1,10.1101/2025.09.24.678290,Birds that don’t exist: niche pre-emption as a constraint on morphological evolution in the Passeroidea,v1,2025-09-24,Ecology,Ecology Letters,10.1111/ele.70320,2026-02,24,3.905,8.40,extracted_data/September_2025/10.1101_2025.09.24.678290_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.09.24.678341_v1,10.1101/2025.09.24.678341,Induced pathogenicity toward open-ocean diatoms by a newly isolated filterable bacterium Ekhidna algicida sp. nov.,v1,2025-09-24,Ecology,The ISME Journal,10.1093/ismejo/wrag038,2026-01-14,22,3.973,10.15,extracted_data/September_2025/10.1101_2025.09.24.678341_v1.xml,top100_ag_bio_multi_journals.csv
ecology_agbio,10.1101_2025.10.22.684061_v1,10.1101/2025.10.22.684061,Chemosynthesis enables microbial communities to flourish in a marine cave ecosystem,v1,2025-10-22,Ecology,The ISME Journal,10.1093/ismejo/wraf286,2026-01-14,22,3.973,10.15,extracted_data/October_2025/10.1101_2025.10.22.684061_v1.xml,top100_ag_bio_multi_journals.csv
evolutionary_biology,10.1101_2024.10.03.616282_v1,10.1101/2024.10.03.616282,Gene-by-environment interactions and adaptive body size variation in mice from the Americas,v1,2024-10-03,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf078,2025-04-01,89,4.085,5.04,extracted_data/October_2024/10.1101_2024.10.03.616282_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.03.616564_v1,10.1101/2024.10.03.616564,Quantifying transcriptome turnover on phylogenies by modeling gene expression as a binary trait,v1,2024-10-03,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf106,2025-04-30,89,4.085,5.04,extracted_data/October_2024/10.1101_2024.10.03.616564_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.08.617316_v3,10.1101/2024.10.08.617316,Odorant receptors mediating avoidance of toxic mustard oils in Drosophila melanogaster are expanded in herbivorous relatives,v3,2024-10-08,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf164,2025-09-01,89,4.085,5.04,extracted_data/May_2025/10.1101_2024.10.08.617316_v3.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.09.617380_v2,10.1101/2024.10.09.617380,Palaeogenomics suggest domesticated camelid herding and wild camelid hunting in early pastoralist societies in the Atacama Desert,v2,2024-10-09,Evolutionary Biology,Nature Communications,10.1038/s41467-025-66343-1,2025-12-16,71,4.761,14.63,extracted_data/October_2025/10.1101_2024.10.09.617380_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.09.617385_v1,10.1101/2024.10.09.617385,Medieval genomes from eastern Iberia illuminate the role of Morisco mass deportations in dismantling a long-standing genetic bridge with North Africa,v1,2024-10-09,Evolutionary Biology,Genome Biology,10.1186/s13059-025-03570-1,2025-04-28,53,5.710,9.04,extracted_data/October_2024/10.1101_2024.10.09.617385_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.14.618318_v3,10.1101/2024.10.14.618318,Dominant contribution of Asgard archaea to eukaryogenesis,v3,2024-10-14,Evolutionary Biology,Nature,10.1038/s41586-025-09960-6,2026-02-05,7,18.288,18.47,extracted_data/July_2025/10.1101_2024.10.14.618318_v3.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.14.618359_v1,10.1101/2024.10.14.618359,Functional characterization of luciferase in a brittle star indicates parallel evolution influenced by genomic availability of haloalkane dehalogenase,v1,2024-10-14,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf081,2025-04-30,89,4.085,5.04,extracted_data/October_2024/10.1101_2024.10.14.618359_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.20.619329_v1,10.1101/2024.10.20.619329,Genetic differentiation is constrained to chromosomal inversions and putative centromeres in locally adapted populations with higher gene flow,v1,2024-10-20,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf092,2025-04-30,89,4.085,5.04,extracted_data/October_2024/10.1101_2024.10.20.619329_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.23.619883_v1,10.1101/2024.10.23.619883,How the Structure of Signaling Regulation Evolves: Insights from an Evolutionary Model,v1,2024-10-23,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf104,2025-04-30,89,4.085,5.04,extracted_data/October_2024/10.1101_2024.10.23.619883_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.24.620075_v1,10.1101/2024.10.24.620075,"SARS-CoV-2 within-host population expansion, diversification and adaptation in zoo tigers, lions and hyenas",v1,2024-10-24,Evolutionary Biology,Nature Communications,10.1038/s41467-025-66402-7,2025-12-13,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.24.620075_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.28.620730_v2,10.1101/2024.10.28.620730,The evolutionary history and modern diversity of triterpenoid cyclases,v2,2024-10-28,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf203,2025-09-01,89,4.085,5.04,extracted_data/August_2025/10.1101_2024.10.28.620730_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.10.29.620637_v1,10.1101/2024.10.29.620637,Compensatory Evolution to DNA Replication Stress is Robust to Nutrient Availability,v1,2024-10-29,Evolutionary Biology,Molecular Systems Biology,10.1038/s44320-025-00127-z,2025-06-26,70,4.783,7.15,extracted_data/November_2024/10.1101_2024.10.29.620637_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.01.621518_v1,10.1101/2024.11.01.621518,Holostean genomes reveal evolutionary novelty in the vertebrate immunoproteasome that have implications for MHCI function,v1,2024-11-01,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag030,2026-03-02,89,4.085,5.04,extracted_data/November_2024/10.1101_2024.11.01.621518_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.01.621567_v2,10.1101/2024.11.01.621567,Squirrel: Reconstructing semi-directed phylogenetic level-1 networks from four-leaved networks or sequence alignments,v2,2024-11-01,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf067,2025-04-01,89,4.085,5.04,extracted_data/March_2025/10.1101_2024.11.01.621567_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.11.622976_v2,10.1101/2024.11.11.622976,Expression divergence in response to sex-biased selection,v2,2024-11-11,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf099,2025-07-01,89,4.085,5.04,extracted_data/March_2025/10.1101_2024.11.11.622976_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.11.623029_v1,10.1101/2024.11.11.623029,Adaptive protein coevolution preserves telomere integrity,v1,2024-11-11,Evolutionary Biology,Science,10.1126/science.adv0657,2025-11-27,19,10.416,15.26,extracted_data/November_2024/10.1101_2024.11.11.623029_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.13.623372_v1,10.1101/2024.11.13.623372,Conservation of cis-regulatory codes over half a billion years of evolution,v1,2024-11-13,Evolutionary Biology,Science Advances,10.1126/sciadv.adw7681,2025-12-12,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.13.623372_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.18.624117_v1,10.1101/2024.11.18.624117,Detecting interspecific positive selection using convolutional neural networks,v1,2024-11-18,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf154,2025-07-01,89,4.085,5.04,extracted_data/November_2024/10.1101_2024.11.18.624117_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.18.624128_v1,10.1101/2024.11.18.624128,Host-specific adaptation of Legionella pneumophila to single and multiple hosts,v1,2024-11-18,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf161,2025-07-30,89,4.085,5.04,extracted_data/November_2024/10.1101_2024.11.18.624128_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.19.624230_v1,10.1101/2024.11.19.624230,Fungal-derived tRNAs are expressed and aminoacylated in orchid mitochondria,v1,2024-11-19,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf025,2025-02-03,89,4.085,5.04,extracted_data/November_2024/10.1101_2024.11.19.624230_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.20.624413_v1,10.1101/2024.11.20.624413,Structural molecular and developmental evidence for cell-type diversity in cnidarian mechanosensory neurons,v1,2024-11-20,Evolutionary Biology,Nature Communications,10.1038/s41467-025-56115-2,2025-02-10,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.20.624413_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.26.625554_v2,10.1101/2024.11.26.625554,Reference genome choice compromises population genetic analyses,v2,2024-11-26,Evolutionary Biology,Cell,10.1016/j.cell.2025.08.034,2025-11,3,22.612,30.22,extracted_data/September_2025/10.1101_2024.11.26.625554_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.11.29.622017_v3,10.1101/2024.11.29.622017,Sex-biased gene expression under sexually antagonistic and sex-limited selection,v3,2024-11-29,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf178,2025-07-30,89,4.085,5.04,extracted_data/July_2025/10.1101_2024.11.29.622017_v3.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.12.03.626650_v1,10.1101/2024.12.03.626650,Repeated climate-driven dispersal and speciation in peripheral populations of Pleistocene mastodons,v1,2024-12-03,Evolutionary Biology,Science Advances,10.1126/sciadv.adw2240,2025-09-12,79,4.324,12.06,extracted_data/December_2024/10.1101_2024.12.03.626650_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.12.05.626989_v1,10.1101/2024.12.05.626989,Structural and evolutionary features of red algal UV sex chromosomes,v1,2024-12-05,Evolutionary Biology,Genome Biology,10.1186/s13059-025-03797-y,2025-10-07,53,5.710,9.04,extracted_data/December_2024/10.1101_2024.12.05.626989_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.12.05.627005_v3,10.1101/2024.12.05.627005,Phylodynamics of Somatic Evolution: A Likelihood-Based Approach for Cellular Reproduction,v3,2024-12-05,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag002,2026-02-02,89,4.085,5.04,extracted_data/November_2025/10.1101_2024.12.05.627005_v3.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.12.09.627561_v1,10.1101/2024.12.09.627561,Pervasive divergence in protein thermostability is mediated by both structural changes and cellular environments,v1,2024-12-09,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf137,2025-07-01,89,4.085,5.04,extracted_data/December_2024/10.1101_2024.12.09.627561_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.12.10.627761_v2,10.1101/2024.12.10.627761,Flexibility in Gene Coexpression at Developmental and Evolutionary Timescales,v2,2024-12-10,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf194,2025-10-01,89,4.085,5.04,extracted_data/May_2025/10.1101_2024.12.10.627761_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.12.13.628417_v1,10.1101/2024.12.13.628417,Macroevolutionary changes in gene expression response to an immune stimulus across the diversity of fishes,v1,2024-12-13,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf323,2026-01-03,89,4.085,5.04,extracted_data/December_2024/10.1101_2024.12.13.628417_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.12.16.628636_v2,10.1101/2024.12.16.628636,Spread of a single superclone drives insecticide resistance in Acyrthosiphon kondoi across an invasive range,v2,2024-12-16,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf246,2025-10-29,89,4.085,5.04,extracted_data/July_2025/10.1101_2024.12.16.628636_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.12.17.628872_v2,10.1101/2024.12.17.628872,Purifying Selection Shapes the Dynamics of P-element Invasion in Drosophila simulans Populations,v2,2024-12-17,Evolutionary Biology,Genome Biology,10.1186/s13059-025-03688-2,2025-07-24,53,5.710,9.04,extracted_data/May_2025/10.1101_2024.12.17.628872_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.12.17.628972_v1,10.1101/2024.12.17.628972,Transposable elements drive regulatory and functional innovation of F-box genes,v1,2024-12-17,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf097,2025-04-30,89,4.085,5.04,extracted_data/December_2024/10.1101_2024.12.17.628972_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2024.12.26.630369_v2,10.1101/2024.12.26.630369,Ectopic gene conversion causing quantitative trait variation,v2,2024-12-26,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf086,2025-04-30,89,4.085,5.04,extracted_data/February_2025/10.1101_2024.12.26.630369_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.01.06.631458_v2,10.1101/2025.01.06.631458,Viral Simulation Reveals Overestimation Bias in Within-Host Phylodynamic Migration Rate Estimates Under Selection,v2,2025-01-06,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag014,2026-02-02,89,4.085,5.04,extracted_data/September_2025/10.1101_2025.01.06.631458_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.01.07.631777_v1,10.1101/2025.01.07.631777,Tandem duplication of serpin genes yields functional variation and snake venom inhibitors,v1,2025-01-07,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf290,2025-10-29,89,4.085,5.04,extracted_data/January_2025/10.1101_2025.01.07.631777_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.01.13.632685_v2,10.1101/2025.01.13.632685,Somatic evolution of stem cell mutations in long-lived plants,v2,2025-01-13,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf165,2025-07-30,89,4.085,5.04,extracted_data/May_2025/10.1101_2025.01.13.632685_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.01.14.633010_v2,10.1101/2025.01.14.633010,Convergent molecular evolution associated with repeated transitions to gregarious larval behaviour in Heliconiini,v2,2025-01-14,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf179,2025-07-30,89,4.085,5.04,extracted_data/January_2025/10.1101_2025.01.14.633010_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.01.16.633336_v2,10.1101/2025.01.16.633336,A new deep-branching environmental lineage of algae,v2,2025-01-16,Evolutionary Biology,Nature Communications,10.1038/s41467-025-67401-4,2025-12-14,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.01.16.633336_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.01.16.633479_v1,10.1101/2025.01.16.633479,Centromeres evolve progressively through selection at the kinetochore interface,v1,2025-01-16,Evolutionary Biology,Nature,10.1038/s41586-025-09779-1,2026-03-26,7,18.288,18.47,extracted_data/January_2025/10.1101_2025.01.16.633479_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.01.18.633704_v1,10.1101/2025.01.18.633704,Fate of a supergene in the shift from diploidy to polyploidy,v1,2025-01-18,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf162,2025-07-30,89,4.085,5.04,extracted_data/January_2025/10.1101_2025.01.18.633704_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.01.20.633836_v1,10.1101/2025.01.20.633836,The evolutionary dynamics of organellar pan-genomes in Arabidopsis thaliana,v1,2025-01-20,Evolutionary Biology,Genome Biology,10.1186/s13059-025-03717-0,2025-08-11,53,5.710,9.04,extracted_data/January_2025/10.1101_2025.01.20.633836_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.01.24.634743_v1,10.1101/2025.01.24.634743,A pancrustacean brain and its visual systems define a Cambrian “great appendage” arthropod,v1,2025-01-24,Evolutionary Biology,Nature Communications,10.1038/s41467-025-62849-w,2025-08-28,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.24.634743_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.01.31.636013_v1,10.1101/2025.01.31.636013,Population structure reverses selection of variants with proportionally scaled birth and death rates,v1,2025-01-31,Evolutionary Biology,Nature Communications,10.1038/s41467-025-66951-x,2025-12-27,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.01.31.636013_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.03.636187_v1,10.1101/2025.02.03.636187,Structural mutations set an equilibrium non-coding genome fraction,v1,2025-02-03,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf315,2025-11-28,89,4.085,5.04,extracted_data/February_2025/10.1101_2025.02.03.636187_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.05.636574_v1,10.1101/2025.02.05.636574,Genomic Insights into the Demographic History and Local Adaptation of Wild Boars Across Eurasia,v1,2025-02-05,Evolutionary Biology,Cell Genomics,10.1016/j.xgen.2025.100954,2025-09,46,6.238,7.85,extracted_data/February_2025/10.1101_2025.02.05.636574_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.06.636795_v1,10.1101/2025.02.06.636795,Systems acclimation to osmotic stress in zygnematophyte cells,v1,2025-02-06,Evolutionary Biology,Nature Communications,10.1038/s41467-026-68329-z,2026-01-16,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.06.636795_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.07.637123_v2,10.1101/2025.02.07.637123,Sweeps in space: leveraging geographic data to identify beneficial alleles in Anopheles gambiae,v2,2025-02-07,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf141,2025-06-04,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.02.07.637123_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.11.637666_v1,10.1101/2025.02.11.637666,"Accounting for chimerism in demographic inference: reconstructing the history of common marmosets (Callithrix jacchus) from high-quality, whole-genome, population-level data",v1,2025-02-11,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf119,2025-06-04,89,4.085,5.04,extracted_data/February_2025/10.1101_2025.02.11.637666_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.11.637762_v1,10.1101/2025.02.11.637762,Comparative population pangenomes reveal unexpected complexity and fitness effects of structural variants,v1,2025-02-11,Evolutionary Biology,Science,10.1126/science.adw1931,2025-12-11,19,10.416,15.26,extracted_data/February_2025/10.1101_2025.02.11.637762_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.12.637871_v1,10.1101/2025.02.12.637871,A century of theories of balancing selection,v1,2025-02-12,Evolutionary Biology,Biological Reviews,10.1111/brv.70103,2026-04,78,4.383,13.59,extracted_data/February_2025/10.1101_2025.02.12.637871_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.13.638116_v3,10.1101/2025.02.13.638116,Identifying single origin rare variants in population genomic data,v3,2025-02-13,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf283,2025-10-29,89,4.085,5.04,extracted_data/October_2025/10.1101_2025.02.13.638116_v3.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.19.638997_v1,10.1101/2025.02.19.638997,Drivers of avian genomic change revealed by evolutionary rate decomposition,v1,2025-02-19,Evolutionary Biology,Nature,10.1038/s41586-025-08777-7,2025-05-29,7,18.288,18.47,extracted_data/February_2025/10.1101_2025.02.19.638997_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.19.639152_v1,10.1101/2025.02.19.639152,Reduced amino acid substitution matrices find traces of ancient coding alphabets in modern day proteins,v1,2025-02-19,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf197,2025-09-01,89,4.085,5.04,extracted_data/February_2025/10.1101_2025.02.19.639152_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.19.639193_v1,10.1101/2025.02.19.639193,Intracellular competition shapes plasmid population dynamics,v1,2025-02-19,Evolutionary Biology,Science,10.1126/science.adx0665,2025-12-18,19,10.416,15.26,extracted_data/February_2025/10.1101_2025.02.19.639193_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.21.639456_v2,10.1101/2025.02.21.639456,Pseudogenes Document Protracted Parallel Regression of Oral Anatomy in Myrmecophagous Mammals,v2,2025-02-21,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag009,2026-02-02,89,4.085,5.04,extracted_data/June_2025/10.1101_2025.02.21.639456_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.22.639697_v1,10.1101/2025.02.22.639697,Bayesian model-averaging of parametric coalescent models for phylodynamic inference,v1,2025-02-22,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf297,2025-11-28,89,4.085,5.04,extracted_data/February_2025/10.1101_2025.02.22.639697_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.26.640439_v1,10.1101/2025.02.26.640439,Dynamics of natural selection preceding human viral epidemics and pandemics,v1,2025-02-26,Evolutionary Biology,Cell,10.1016/j.cell.2026.02.006,2026-03,3,22.612,30.22,extracted_data/March_2025/10.1101_2025.02.26.640439_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.02.28.640660_v1,10.1101/2025.02.28.640660,Seeing in the deep: evolution of the opsin gene expression in Bermin crater lake cichlids,v1,2025-02-28,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf286,2025-10-29,89,4.085,5.04,extracted_data/March_2025/10.1101_2025.02.28.640660_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.03.01.640274_v1,10.1101/2025.03.01.640274,Actinotrichia-independent developmental mechanisms of spiny rays facilitate the morphological diversification of Acanthomorpha fish fins,v1,2025-03-01,Evolutionary Biology,Nature Communications,10.1038/s41467-026-69180-y,2026-02-14,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.01.640274_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.03.05.641710_v1,10.1101/2025.03.05.641710,Efficient detection and characterization of targets of natural selection using transfer learning,v1,2025-03-05,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf094,2025-04-30,89,4.085,5.04,extracted_data/March_2025/10.1101_2025.03.05.641710_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.03.07.641981_v1,10.1101/2025.03.07.641981,Mutations of short tandem repeats explain abundant trait heritability in Arabidopsis,v1,2025-03-07,Evolutionary Biology,Genome Biology,10.1186/s13059-025-03720-5,2025-08-12,53,5.710,9.04,extracted_data/March_2025/10.1101_2025.03.07.641981_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.03.14.642314_v1,10.1101/2025.03.14.642314,Convergent strigolactone perception via independent horizontal gene transfer of pre-adapted α/β-hydrolases,v1,2025-03-14,Evolutionary Biology,Molecular Plant,10.1016/j.molp.2025.09.021,2025-11,57,5.519,13.75,extracted_data/March_2025/10.1101_2025.03.14.642314_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.03.14.643248_v1,10.1101/2025.03.14.643248,The evolution of gene regulation in mammalian cerebellum development,v1,2025-03-14,Evolutionary Biology,Science,10.1126/science.adw9154,2026-01-29,19,10.416,15.26,extracted_data/March_2025/10.1101_2025.03.14.643248_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.03.25.645378_v1,10.1101/2025.03.25.645378,Detecting Introgression in Shallow Phylogenies: How Minor Molecular Clock Deviations Lead to Major Inference Errors,v1,2025-03-25,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf216,2025-10-01,89,4.085,5.04,extracted_data/March_2025/10.1101_2025.03.25.645378_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.03.27.645773_v1,10.1101/2025.03.27.645773,Genomic incompatibilities are persistent barriers when speciation happens with gene flow in Formica ants,v1,2025-03-27,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag063,2026-03-11,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.03.27.645773_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.03.28.644651_v1,10.1101/2025.03.28.644651,Global metagenomics reveals plastid diversity and unexplored algal lineages,v1,2025-03-28,Evolutionary Biology,Nature Communications,10.1038/s41467-026-68871-w,2026-01-30,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.03.28.644651_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.03.31.646294_v1,10.1101/2025.03.31.646294,Molecular phylogeny of the SELMA translocation machinery recounts the evolution of complex photosynthetic eukaryotes,v1,2025-03-31,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf167,2025-09-01,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.03.31.646294_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.04.01.646563_v1,10.1101/2025.04.01.646563,Whole-genome duplication reshapes adaptation: autotetraploid Arabidopsis arenosa leverages its high genetic variation to compensate for selection constraints,v1,2025-04-01,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf298,2025-11-28,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.04.01.646563_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.04.10.648203_v1,10.1101/2025.04.10.648203,"The visual system of the longest-living vertebrate, the Greenland shark",v1,2025-04-10,Evolutionary Biology,Nature Communications,10.1038/s41467-025-67429-6,2026-01-05,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.10.648203_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.04.11.648246_v2,10.1101/2025.04.11.648246,Genomic comparisons shed light on the adaptive basis of brain size plasticity and chromosomal instability in the Eurasian common shrew,v2,2025-04-11,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag006,2026-02-02,89,4.085,5.04,extracted_data/June_2025/10.1101_2025.04.11.648246_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.04.16.648507_v1,10.1101/2025.04.16.648507,Dorsoventral limb patterning in paired appendages emerged via regulatory repurposing of an ancestral posterior fin module,v1,2025-04-16,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf331,2026-01-03,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.04.16.648507_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.04.18.645578_v1,10.1101/2025.04.18.645578,Stepwise recombination suppression around the mating-type locus associated with a diploid-like life cycle in Schizothecium fungi,v1,2025-04-18,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf325,2026-01-03,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.04.18.645578_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.04.18.649517_v2,10.1101/2025.04.18.649517,The genomic imprint of chromosomal inversions and demographic history in island populations of deer mice,v2,2025-04-18,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf254,2025-10-29,89,4.085,5.04,extracted_data/August_2025/10.1101_2025.04.18.649517_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.04.19.649497_v1,10.1101/2025.04.19.649497,SAI: A Python Package for Statistics for Adaptive Introgression,v1,2025-04-19,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf295,2025-11-28,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.04.19.649497_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.04.22.650036_v1,10.1101/2025.04.22.650036,Abundant Recurrent Mitochondrial Mutations and Widespread Mitonuclear Epistasis in Caenorhabditis elegans,v1,2025-04-22,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf300,2025-11-28,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.04.22.650036_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.04.23.650183_v1,10.1101/2025.04.23.650183,Navigating sampling bias in discrete phylogeographic analysis: assessing the performance of an adjusted Bayes factor,v1,2025-04-23,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf253,2025-10-29,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.04.23.650183_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.04.25.647736_v1,10.1101/2025.04.25.647736,Ancient co-option of LTR retrotransposons as yeast centromeres,v1,2025-04-25,Evolutionary Biology,Nature,10.1038/s41586-025-10092-0,2026-03-26,7,18.288,18.47,extracted_data/April_2025/10.1101_2025.04.25.647736_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.05.07.652388_v1,10.1101/2025.05.07.652388,"Sponges, ctenophores and the statistical significance of syntenies",v1,2025-05-07,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf321,2025-11-28,89,4.085,5.04,extracted_data/May_2025/10.1101_2025.05.07.652388_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.05.07.652506_v1,10.1101/2025.05.07.652506,No evidence of sexually antagonistic coevolution in Drosophila reproductive tract transcriptomes,v1,2025-05-07,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf210,2025-09-01,89,4.085,5.04,extracted_data/May_2025/10.1101_2025.05.07.652506_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.05.21.655380_v2,10.1101/2025.05.21.655380,Resurrected nitrogenases recapitulate canonical N-isotope biosignatures over two billion years,v2,2025-05-21,Evolutionary Biology,Nature Communications,10.1038/s41467-025-67423-y,2026-01-22,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.05.21.655380_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.05.22.655455_v3,10.1101/2025.05.22.655455,Defective splicing of Y-chromosome-linked gigantic genes contributes to hybrid male sterility in Drosophila,v3,2025-05-22,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag045,2026-03-02,89,4.085,5.04,extracted_data/January_2026/10.1101_2025.05.22.655455_v3.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.06.05.657981_v1,10.1101/2025.06.05.657981,Holotype genome of the lesula provides insights into demography and evolution of a threatened primate lineage,v1,2025-06-05,Evolutionary Biology,Genome Biology,10.1186/s13059-025-03877-z,2025-12-01,53,5.710,9.04,extracted_data/June_2025/10.1101_2025.06.05.657981_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.06.12.659400_v1,10.1101/2025.06.12.659400,Seasonal influenza viruses show distinct adaptive dynamics during growth in chicken eggs,v1,2025-06-12,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf227,2025-10-01,89,4.085,5.04,extracted_data/June_2025/10.1101_2025.06.12.659400_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.06.18.660325_v1,10.1101/2025.06.18.660325,Transposable elements hitchhike on Starships across fungal genomes,v1,2025-06-18,Evolutionary Biology,Nature Communications,10.1038/s41467-026-69410-3,2026-02-11,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.18.660325_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.06.26.659588_v1,10.1101/2025.06.26.659588,The 3D architecture of the ctenophore aboral organ and the evolution of complex integrative centers in animals,v1,2025-06-26,Evolutionary Biology,Science Advances,10.1126/sciadv.aea8399,2026-03-06,79,4.324,12.06,extracted_data/June_2025/10.1101_2025.06.26.659588_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.06.28.662112_v2,10.1101/2025.06.28.662112,Cost of altered translation accuracy shapes adaptation to antibiotics in E. coli,v2,2025-06-28,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf312,2025-11-28,89,4.085,5.04,extracted_data/November_2025/10.1101_2025.06.28.662112_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.06.30.662370_v1,10.1101/2025.06.30.662370,Estimating the reduction in genetic diversity from background selection under non-equilibrium demography and partial selfing,v1,2025-06-30,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag004,2026-02-02,89,4.085,5.04,extracted_data/July_2025/10.1101_2025.06.30.662370_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.07.02.662832_v1,10.1101/2025.07.02.662832,Symbiotic entrenchment through ecological Catch-22,v1,2025-07-02,Evolutionary Biology,Cell,10.1016/j.cell.2025.12.041,2026-02,3,22.612,30.22,extracted_data/July_2025/10.1101_2025.07.02.662832_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.07.03.661983_v1,10.1101/2025.07.03.661983,"Evolution of Insulin, Insulin-like Growth Factor, and Their Cognate Receptors in Vertebrates, Invertebrates, and Viruses",v1,2025-07-03,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf319,2026-01-03,89,4.085,5.04,extracted_data/July_2025/10.1101_2025.07.03.661983_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.07.03.662903_v1,10.1101/2025.07.03.662903,Structural similarities reveal an expansive conotoxin family with a two-finger toxin fold,v1,2025-07-03,Evolutionary Biology,Protein Science,10.1002/pro.70333,2025-11,73,4.657,6.35,extracted_data/July_2025/10.1101_2025.07.03.662903_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.07.03.662996_v1,10.1101/2025.07.03.662996,Alternative splicing contributes to plasticity and regulatory divergence in locally adapted house mice from the Americas,v1,2025-07-03,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf332,2026-01-03,89,4.085,5.04,extracted_data/July_2025/10.1101_2025.07.03.662996_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.07.06.663360_v2,10.1101/2025.07.06.663360,Soft selective sweeps predominate in the yellow fever mosquito Aedes aegypti,v2,2025-07-06,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag068,2026-04-01,89,4.085,5.04,extracted_data/February_2026/10.1101_2025.07.06.663360_v2.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.07.07.663491_v1,10.1101/2025.07.07.663491,Genomic and morphometric evidence for Austronesian-mediated pig translocation in the Pacific,v1,2025-07-07,Evolutionary Biology,Science,10.1126/science.adv4963,2026-01,19,10.416,15.26,extracted_data/July_2025/10.1101_2025.07.07.663491_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.07.09.663497_v1,10.1101/2025.07.09.663497,Invasion preferences suggest a possible role for Plasmodium falciparum parasites in the expansion of Duffy negativity in West and Central Africa,v1,2025-07-09,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag033,2026-02-02,89,4.085,5.04,extracted_data/July_2025/10.1101_2025.07.09.663497_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.07.17.665246_v3,10.1101/2025.07.17.665246,Molecular Clock Dating of Deep-Time Evolution Using Complex Mixture Models,v3,2025-07-17,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag039,2026-03-02,89,4.085,5.04,extracted_data/February_2026/10.1101_2025.07.17.665246_v3.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.07.22.666138_v1,10.1101/2025.07.22.666138,Developmental underpinnings of morphological disparity in the avian bony palate,v1,2025-07-22,Evolutionary Biology,Nature Communications,10.1038/s41467-026-69576-w,2026-02-25,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.22.666138_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.08.05.668791_v1,10.1101/2025.08.05.668791,Splicing regulation and intron evolution in the short-intron ciliate model of endosymbiosis Paramecium bursaria,v1,2025-08-05,Evolutionary Biology,Nucleic Acids Research,10.1093/nar/gkag063,2026-01-22,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.05.668791_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.08.07.669155_v1,10.1101/2025.08.07.669155,SLiM 5: Eco-evolutionary simulations across multiple chromosomes and full genomes,v1,2025-08-07,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msaf313,2026-01-03,89,4.085,5.04,extracted_data/August_2025/10.1101_2025.08.07.669155_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.08.08.669436_v1,10.1101/2025.08.08.669436,Admixture influences the genetic architecture of DNA methylation in a wild primate hybrid zone,v1,2025-08-08,Evolutionary Biology,Genome Biology,10.1186/s13059-026-04013-1,2026-02-27,53,5.710,9.04,extracted_data/August_2025/10.1101_2025.08.08.669436_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.08.22.671697_v1,10.1101/2025.08.22.671697,Regulatory features determine the evolutionary fate of laterally acquired genes in plants,v1,2025-08-22,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag042,2026-02-02,89,4.085,5.04,extracted_data/August_2025/10.1101_2025.08.22.671697_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.08.27.672524_v1,10.1101/2025.08.27.672524,Evolutionary innovation within conserved gene regulatory networks underlying biomineralized skeletons in Bilateria,v1,2025-08-27,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag019,2026-02-02,89,4.085,5.04,extracted_data/September_2025/10.1101_2025.08.27.672524_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.09.05.674532_v1,10.1101/2025.09.05.674532,Two independent origins of XY sex chromosomes in Asparagus,v1,2025-09-05,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag003,2026-02-02,89,4.085,5.04,extracted_data/September_2025/10.1101_2025.09.05.674532_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.09.17.676786_v1,10.1101/2025.09.17.676786,The mutation landscape of Daphnia obtusa reveals evolutionary forces shaping genome stability,v1,2025-09-17,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag037,2026-02-02,89,4.085,5.04,extracted_data/September_2025/10.1101_2025.09.17.676786_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.09.23.678138_v1,10.1101/2025.09.23.678138,Comparing Neanderthal introgression maps reveals core agreement but substantial heterogeneity,v1,2025-09-23,Evolutionary Biology,Molecular Biology and Evolution,10.1093/molbev/msag064,2026-03-02,89,4.085,5.04,extracted_data/September_2025/10.1101_2025.09.23.678138_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.1101_2025.10.24.684263_v1,10.1101/2025.10.24.684263,ATG gene duplication in vertebrates: evolutionary divergence and its functional implications,v1,2025-10-24,Evolutionary Biology,Autophagy,10.1080/15548627.2026.2618126,2026-04-03,77,4.447,10.28,extracted_data/October_2025/10.1101_2025.10.24.684263_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.64898_2025.12.08.693098_v1,10.64898/2025.12.08.693098,Identification of the protein precursor for thyroid hormone synthesis in the basal chordate ascidian Styela clava,v1,2025-12-08,Evolutionary Biology,Nature Communications,10.1038/s41467-026-69290-7,2026-02-07,71,4.761,14.63,extracted_data/December_2025/10.64898_2025.12.08.693098_v1.xml,top100_bgm_multi_journals.csv
evolutionary_biology,10.64898_2025.12.23.696161_v1,10.64898/2025.12.23.696161,Fidelity in co-diversified symbiosis,v1,2025-12-23,Evolutionary Biology,Nature Communications,10.1038/s41467-026-69366-4,2026-02-12,71,4.761,14.63,extracted_data/December_2025/10.64898_2025.12.23.696161_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.10.01.616124_v1,10.1101/2024.10.01.616124,G4mer: An RNA language model for transcriptome-wide identification of G-quadruplexes and disease variants from population-scale genetic data,v1,2024-10-01,Genetics,Nature Communications,10.1038/s41467-025-65020-7,2025-11-20,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.01.616124_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.10.04.616652_v1,10.1101/2024.10.04.616652,Unveiling the Origins and Genetic Makeup of the ‘Forgotten People’: A Study of the Sarmatian-Period Population in the Carpathian Basin,v1,2024-10-04,Genetics,Cell,10.1016/j.cell.2025.05.009,2025-07,3,22.612,30.22,extracted_data/October_2024/10.1101_2024.10.04.616652_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.10.07.617092_v1,10.1101/2024.10.07.617092,Linking candidate causal autoimmune variants to T cell networks using genetic and epigenetic screens in primary human T cells,v1,2024-10-07,Genetics,Nature Genetics,10.1038/s41588-025-02301-3,2025-10,9,16.586,16.08,extracted_data/October_2024/10.1101_2024.10.07.617092_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.10.14.616932_v1,10.1101/2024.10.14.616932,The Taiwan Precision Medicine Initiative: A Cohort for Large-Scale Studies,v1,2024-10-14,Genetics,Nature,10.1038/s41586-025-09680-x,2025-12-04,7,18.288,18.47,extracted_data/October_2024/10.1101_2024.10.14.616932_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.10.17.618648_v2,10.1101/2024.10.17.618648,Evaluating transportability of in-vitro cellular models to in-vivo human phenotypes using gene perturbation data,v2,2024-10-17,Genetics,Nature Communications,10.1038/s41467-025-67199-1,2025-12-13,71,4.761,14.63,extracted_data/June_2025/10.1101_2024.10.17.618648_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.10.21.619344_v1,10.1101/2024.10.21.619344,Nested admixture during and after the Trans-Atlantic Slave Trade on the island of São Tomé,v1,2024-10-21,Genetics,Molecular Biology and Evolution,10.1093/molbev/msaf156,2025-07-01,89,4.085,5.04,extracted_data/October_2024/10.1101_2024.10.21.619344_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.10.21.619441_v1,10.1101/2024.10.21.619441,CADET: Enhanced transcriptome-wide association analyses in admixed samples using eQTL summary data,v1,2024-10-21,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.05.010,2025-07,74,4.531,7.17,extracted_data/October_2024/10.1101_2024.10.21.619441_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.10.21.619456_v2,10.1101/2024.10.21.619456,Insufficient evidence for a severe bottleneck in humans during the Early to Middle Pleistocene transition,v2,2024-10-21,Genetics,Molecular Biology and Evolution,10.1093/molbev/msaf041,2025-02-03,89,4.085,5.04,extracted_data/October_2024/10.1101_2024.10.21.619456_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.10.23.619767_v1,10.1101/2024.10.23.619767,"The NHGRI-EBI GWAS Catalog: standards for reusability, sustainability and diversity",v1,2024-10-23,Genetics,Nucleic Acids Research,10.1093/nar/gkae1070,2025-01-06,34,7.776,16.90,extracted_data/October_2024/10.1101_2024.10.23.619767_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.10.31.621375_v2,10.1101/2024.10.31.621375,A Scalable Framework for Identifying Allelic Series from Summary Statistics,v2,2024-10-31,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.09.012,2025-11,74,4.531,7.17,extracted_data/January_2025/10.1101_2024.10.31.621375_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.11.03.621751_v2,10.1101/2024.11.03.621751,The Causal Pivot: A Structural Approach to Genetic Heterogeneity and Variant Discovery in Complex Diseases,v2,2024-11-03,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.07.012,2025-09,74,4.531,7.17,extracted_data/December_2024/10.1101_2024.11.03.621751_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.11.04.618564_v1,10.1101/2024.11.04.618564,Defining the genetic determinants of CD8+ T cell receptor repertoire in the context of immune checkpoint blockade,v1,2024-11-04,Genetics,Science Advances,10.1126/sciadv.adu3461,2025-07-25,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.04.618564_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.11.04.621955_v1,10.1101/2024.11.04.621955,Diverse ancestral representation improves genetic intolerance metrics,v1,2024-11-04,Genetics,Nature Communications,10.1038/s41467-025-57885-5,2025-03-18,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.04.621955_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.11.05.622098_v1,10.1101/2024.11.05.622098,Maximizing meiotic crossover rate reveals the map of Crossover Potential,v1,2024-11-05,Genetics,Nature Communications,10.1038/s41467-025-60663-y,2025-06-12,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.05.622098_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.11.06.622274_v1,10.1101/2024.11.06.622274,Lifetime brain atrophy estimated from a single MRI: measurement characteristics and genome-wide correlates,v1,2024-11-06,Genetics,Nature Communications,10.1038/s41467-025-61978-6,2025-07-21,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.06.622274_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.11.07.622542_v1,10.1101/2024.11.07.622542,Disease-Linked Regulatory DNA Variants and Homeostatic Transcription Factors in Epidermis,v1,2024-11-07,Genetics,Nature Communications,10.1038/s41467-025-63070-5,2025-09-25,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.07.622542_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.11.25.625248_v1,10.1101/2024.11.25.625248,"Insights into the causes and consequences of DNA repeat expansions from 700,000 biobank participants",v1,2024-11-25,Genetics,Nature,10.1038/s41586-025-09886-z,2026-02-26,7,18.288,18.47,extracted_data/November_2024/10.1101_2024.11.25.625248_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.11.26.625496_v2,10.1101/2024.11.26.625496,Programmable epigenome editing by transient delivery of CRISPR epigenome editor ribonucleoproteins,v2,2024-11-26,Genetics,Nature Communications,10.1038/s41467-025-63167-x,2025-08-26,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.26.625496_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.12.10.627763_v1,10.1101/2024.12.10.627763,Genomic divergence shaped the genetic regulation of meiotic homologous recombination in Brassica allopolyploids,v1,2024-12-10,Genetics,Molecular Biology and Evolution,10.1093/molbev/msaf073,2025-04-01,89,4.085,5.04,extracted_data/December_2024/10.1101_2024.12.10.627763_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.12.13.628411_v1,10.1101/2024.12.13.628411,Origins and Implications of Intron Retention Quantitative Trait Loci in Human Tissues,v1,2024-12-13,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.10.002,2025-12,74,4.531,7.17,extracted_data/December_2024/10.1101_2024.12.13.628411_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2024.12.19.629385_v1,10.1101/2024.12.19.629385,Identification of SENP7 and UTF1/VENTX as new loci influencing clustered protocadherin methylation across blood and brain using a genome-wide association study,v1,2024-12-19,Genetics,Molecular Psychiatry,10.1038/s41380-025-03283-8,2026-03,93,4.022,10.52,extracted_data/January_2025/10.1101_2024.12.19.629385_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.01.630985_v2,10.1101/2025.01.01.630985,LCORL and STC2 variants increase body size and growth rate in cattle and other animals,v2,2025-01-01,Genetics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf025,2025-03-17,98,3.964,7.21,extracted_data/January_2025/10.1101_2025.01.01.630985_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.02.631110_v2,10.1101/2025.01.02.631110,Tumor-induced orexigenic imbalance lowers protein appetite and drives early organ wasting symptoms,v2,2025-01-02,Genetics,Nature Communications,10.1038/s41467-026-70074-2,2026-03-06,71,4.761,14.63,extracted_data/January_2026/10.1101_2025.01.02.631110_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.04.631305_v1,10.1101/2025.01.04.631305,Tripartite loops reverse antibiotic resistance,v1,2025-01-04,Genetics,Molecular Biology and Evolution,10.1093/molbev/msaf115,2025-06-04,89,4.085,5.04,extracted_data/January_2025/10.1101_2025.01.04.631305_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.09.631797_v2,10.1101/2025.01.09.631797,Inherent instability of simple DNA repeats shapes an evolutionarily stable distribution of repeat lengths,v2,2025-01-09,Genetics,Nature Communications,10.1038/s41467-025-66725-5,2025-12-09,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.01.09.631797_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.10.632475_v1,10.1101/2025.01.10.632475,A genealogy-based approach for revealing ancestry-specific structures in admixed populations,v1,2025-01-10,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.06.016,2025-08,74,4.531,7.17,extracted_data/January_2025/10.1101_2025.01.10.632475_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.11.632557_v1,10.1101/2025.01.11.632557,Sparse modeling of interactions enables fast detection of genome-wide epistasis in biobank-scale studies,v1,2025-01-11,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.07.004,2025-09,74,4.531,7.17,extracted_data/January_2025/10.1101_2025.01.11.632557_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.15.633041_v2,10.1101/2025.01.15.633041,Airqtl dissects cell state-specific causal gene regulatory networks with efficient single-cell eQTL mapping,v2,2025-01-15,Genetics,Nature Communications,10.1038/s41467-025-66214-9,2025-12-10,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.01.15.633041_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.16.633321_v1,10.1101/2025.01.16.633321,Role of X chromosome and dosage compensation mechanisms in complex trait genetics,v1,2025-01-16,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.04.004,2025-06,74,4.531,7.17,extracted_data/January_2025/10.1101_2025.01.16.633321_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.19.633789_v1,10.1101/2025.01.19.633789,Towards whole-genome inference of polygenic scores with fast and memory-efficient algorithms,v1,2025-01-19,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.05.002,2025-07,74,4.531,7.17,extracted_data/January_2025/10.1101_2025.01.19.633789_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.23.634177_v1,10.1101/2025.01.23.634177,Nucleoporins shape germ granule architecture and balance small RNA silencing pathways,v1,2025-01-23,Genetics,Nature Communications,10.1038/s41467-025-59526-3,2025-05-08,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.23.634177_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.28.635315_v1,10.1101/2025.01.28.635315,Acquisition of ampliconic sequences marks a selfish mouse t-haplotype,v1,2025-01-28,Genetics,Nature Communications,10.1038/s41467-025-66616-9,2025-12-01,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.28.635315_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.01.29.635528_v1,10.1101/2025.01.29.635528,Multiple-testing corrections in selection scans using identity-by-descent segments,v1,2025-01-29,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.09.004,2025-11,74,4.531,7.17,extracted_data/January_2025/10.1101_2025.01.29.635528_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.02.04.636462_v1,10.1101/2025.02.04.636462,The conserved N-terminal SANT1-binding domain (SBD) of EZH2 Regulates PRC2 Activity,v1,2025-02-04,Genetics,Genes & Development,10.1101/gad.353070.125,2026-02-09,96,4.005,4.89,extracted_data/February_2025/10.1101_2025.02.04.636462_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.02.07.636600_v1,10.1101/2025.02.07.636600,In vivo base editing reduces liver cysts in autosomal dominant polycystic kidney disease,v1,2025-02-07,Genetics,Molecular Therapy,10.1016/j.ymthe.2025.08.026,2025-11,95,4.008,9.40,extracted_data/February_2025/10.1101_2025.02.07.636600_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.02.07.637078_v1,10.1101/2025.02.07.637078,Bronze Age Yersinia pestis genome from sheep sheds light on hosts and evolution of a prehistoric plague lineage,v1,2025-02-07,Genetics,Cell,10.1016/j.cell.2025.07.029,2025-10,3,22.612,30.22,extracted_data/February_2025/10.1101_2025.02.07.637078_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.02.08.636946_v2,10.1101/2025.02.08.636946,"Rad51, Rad54, and ZMM proteins antagonize the mismatch repair system to promote fertility of budding yeast intraspecies hybrid zygotes",v2,2025-02-08,Genetics,Nucleic Acids Research,10.1093/nar/gkaf847,2025-08-27,34,7.776,16.90,extracted_data/July_2025/10.1101_2025.02.08.636946_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.02.10.636471_v1,10.1101/2025.02.10.636471,Tracing social mechanisms and interregional connections in Early Bronze Age Societies in Lower Austria,v1,2025-02-10,Genetics,Nature Communications,10.1038/s41467-025-67906-y,2025-12-31,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.10.636471_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.02.15.637872_v2,10.1101/2025.02.15.637872,Maternal age and genome-wide failure of meiotic recombination are associated with triploid conceptions in humans,v2,2025-02-15,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.09.014,2025-11,74,4.531,7.17,extracted_data/February_2025/10.1101_2025.02.15.637872_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.02.20.639288_v1,10.1101/2025.02.20.639288,ETP-Specific Knockout Mice Reveal Endotrophin as a Key Regulator of Kidney Fibrosis in Ischemia-Reperfusion Injury Models,v1,2025-02-20,Genetics,Experimental & Molecular Medicine,10.1038/s12276-025-01567-1,2025-11-07,97,4.001,12.18,extracted_data/February_2025/10.1101_2025.02.20.639288_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.02.24.639925_v1,10.1101/2025.02.24.639925,"Whole-genome sequencing analysis of anthropometric traits in 672,976 individuals reveals convergence between rare and common genetic associations",v1,2025-02-24,Genetics,Nature Communications,10.1038/s41467-026-69208-3,2026-02-06,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.24.639925_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.02.25.640133_v1,10.1101/2025.02.25.640133,Blood-Based Epigenetic Instability Linked to Human Aging and Disease,v1,2025-02-25,Genetics,Nature Communications,10.1038/s41467-026-69430-z,2026-02-14,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.02.25.640133_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.02.25.640191_v1,10.1101/2025.02.25.640191,Landscapes of missense variant impact for human superoxide dismutase 1,v1,2025-02-25,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.08.019,2025-10,74,4.531,7.17,extracted_data/March_2025/10.1101_2025.02.25.640191_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.03.13.642997_v1,10.1101/2025.03.13.642997,Genome-wide analysis reveals the genetic basis of key agronomic traits and modern wheat breeding in Henan Province,v1,2025-03-13,Genetics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzag015,2026-02-15,98,3.964,7.21,extracted_data/March_2025/10.1101_2025.03.13.642997_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.03.13.643019_v1,10.1101/2025.03.13.643019,clusIBD: Robust Detection of Identity-by-descent (IBD) Segments Using Unphased Genetic Data from Poor-quality DNA Samples,v1,2025-03-13,Genetics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf055,2025-07-11,98,3.964,7.21,extracted_data/March_2025/10.1101_2025.03.13.643019_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.03.18.643935_v1,10.1101/2025.03.18.643935,Methylglyoxal mutagenizes single-stranded DNA via Rev1-associated slippage and mispairing,v1,2025-03-18,Genetics,Nucleic Acids Research,10.1093/nar/gkaf705,2025-07-19,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.18.643935_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.03.19.644124_v1,10.1101/2025.03.19.644124,Moss BRCA2 lacking canonical DNA binding domain promotes efficient homologous recombination and binds to DNA,v1,2025-03-19,Genetics,Nucleic Acids Research,10.1093/nar/gkaf856,2025-09-05,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.19.644124_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.03.20.644349_v3,10.1101/2025.03.20.644349,Novel insights into the genetic architecture and mechanisms of host/microbiome interactions from a multi-cohort analysis of outbred laboratory rats,v3,2025-03-20,Genetics,Nature Communications,10.1038/s41467-025-66105-z,2025-12-18,71,4.761,14.63,extracted_data/September_2025/10.1101_2025.03.20.644349_v3.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.03.20.644369_v1,10.1101/2025.03.20.644369,Systematic analysis of genetic and phenotypic characteristics reveals antisense oligonucleotide therapy potential for one-third of neurodevelopmental disorders,v1,2025-03-20,Genetics,Genome Medicine,10.1186/s13073-025-01477-x,2025-05-21,64,5.078,10.74,extracted_data/March_2025/10.1101_2025.03.20.644369_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.03.24.645017_v1,10.1101/2025.03.24.645017,Inherited resilience to clonal hematopoiesis by modifying stem cell RNA regulation,v1,2025-03-24,Genetics,Science,10.1126/science.adx4174,2026-01,19,10.416,15.26,extracted_data/March_2025/10.1101_2025.03.24.645017_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.04.10.646767_v1,10.1101/2025.04.10.646767,Single-Cell eQTL Mapping Reveals Cell Type-Specific Genetic Regulation in Lung Cancer,v1,2025-04-10,Genetics,Cell Genomics,10.1016/j.xgen.2025.101100,2026-03,46,6.238,7.85,extracted_data/April_2025/10.1101_2025.04.10.646767_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.04.12.648544_v2,10.1101/2025.04.12.648544,The LINC complex component Kms1 and CENP-B protein Cbp1 cooperate to enforce faithful homology-directed DNA repair at the nuclear periphery in S. pombe,v2,2025-04-12,Genetics,Genes & Development,10.1101/gad.353167.125,2026-04-01,96,4.005,4.89,extracted_data/October_2025/10.1101_2025.04.12.648544_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.04.25.648738_v1,10.1101/2025.04.25.648738,RNA-coupled CRISPR Screens Reveal ZNF207 as a Regulator of LMNA Aberrant Splicing in Progeria,v1,2025-04-25,Genetics,Molecular Cell,10.1016/j.molcel.2025.12.003,2026-01,26,9.051,12.04,extracted_data/April_2025/10.1101_2025.04.25.648738_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.05.16.654529_v2,10.1101/2025.05.16.654529,Progressive neuroinflammation and deficits in motor function in a mouse model with an Epg5 pathogenic variant of Vici syndrome,v2,2025-05-16,Genetics,Experimental & Molecular Medicine,10.1038/s12276-026-01644-z,2026-01-30,97,4.001,12.18,extracted_data/October_2025/10.1101_2025.05.16.654529_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.05.20.655206_v1,10.1101/2025.05.20.655206,SPLiCR-seq: A CRISPR-Based Screening Platform for RNA splicing Identifies Novel Regulators of IRE1-XBP1 Signaling Under ER Stress,v1,2025-05-20,Genetics,Nature Communications,10.1038/s41467-025-67633-4,2025-12-19,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.20.655206_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.05.26.656066_v1,10.1101/2025.05.26.656066,H3K4me2 orchestrates H2A.Z and Polycomb repressive marks in Arabidopsis,v1,2025-05-26,Genetics,Nature Communications,10.1038/s41467-025-66645-4,2025-11-26,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.26.656066_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.05.28.655990_v1,10.1101/2025.05.28.655990,Genetic regulation of fatty acid content in adipose tissue,v1,2025-05-28,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.12.008,2026-02,74,4.531,7.17,extracted_data/May_2025/10.1101_2025.05.28.655990_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.06.17.659865_v1,10.1101/2025.06.17.659865,Genetic impacts on within-pair DNA methylation variance in monozygotic twins capture gene-environment interactions and cell-type effects,v1,2025-06-17,Genetics,Genome Biology,10.1186/s13059-026-03947-w,2026-02-07,53,5.710,9.04,extracted_data/June_2025/10.1101_2025.06.17.659865_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.06.27.662004_v2,10.1101/2025.06.27.662004,The Drosophila proventriculus lacks stem cells but compensates for age-related cell loss via endoreplication-mediated cell growth,v2,2025-06-27,Genetics,Nature Communications,10.1038/s41467-026-68876-5,2026-01-27,71,4.761,14.63,extracted_data/January_2026/10.1101_2025.06.27.662004_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.07.03.663057_v1,10.1101/2025.07.03.663057,Multiple-testing corrections in case-control studies using identity-by-descent segments,v1,2025-07-03,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2026.01.013,2026-03,74,4.531,7.17,extracted_data/July_2025/10.1101_2025.07.03.663057_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.07.23.666394_v1,10.1101/2025.07.23.666394,Maternal CENP-C restores centromere symmetry in mammalian zygotes to ensure proper chromosome segregation,v1,2025-07-23,Genetics,Developmental Cell,10.1016/j.devcel.2025.08.017,2026-01,62,5.180,7.30,extracted_data/July_2025/10.1101_2025.07.23.666394_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.07.30.667638_v2,10.1101/2025.07.30.667638,Enhanced muscle uptake of chemically optimized miR-23b antisense oligonucleotides as lead compounds for Myotonic Dystrophy type 1,v2,2025-07-30,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2026.01.016,2026-03,74,4.531,7.17,extracted_data/February_2026/10.1101_2025.07.30.667638_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.08.05.668705_v1,10.1101/2025.08.05.668705,Improving polygenic risk prediction performance through integrating electronic health records by phenotype embedding,v1,2025-08-05,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.11.006,2025-12,74,4.531,7.17,extracted_data/August_2025/10.1101_2025.08.05.668705_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.08.05.668745_v1,10.1101/2025.08.05.668745,Higher eQTL power reveals signals that boost GWAS colocalization,v1,2025-08-05,Genetics,The American Journal of Human Genetics,10.1016/j.ajhg.2026.02.009,2026-04,74,4.531,7.17,extracted_data/August_2025/10.1101_2025.08.05.668745_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.08.26.672495_v3,10.1101/2025.08.26.672495,Transcriptional Readthrough at Atf4 Locus Suppresses Rps19bp1 and Impairs Heart Development,v3,2025-08-26,Genetics,Cardiovascular Research,10.1093/cvr/cvaf237,2026-02-14,100,3.947,9.65,extracted_data/September_2025/10.1101_2025.08.26.672495_v3.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.09.01.673407_v1,10.1101/2025.09.01.673407,A predictive framework for stop-loss variants with C-terminal extensions,v1,2025-09-01,Genetics,Nucleic Acids Research,10.1093/nar/gkag031,2026-01-14,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.01.673407_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.09.23.678060_v2,10.1101/2025.09.23.678060,Fine-scale structure of a whole regional population through genetics and genealogies,v2,2025-09-23,Genetics,Nature Communications,10.1038/s41467-026-70175-y,2026-03-02,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.09.23.678060_v2.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.10.20.683421_v1,10.1101/2025.10.20.683421,HyperdCas12a-Based Multiplexed Genetic Regulation in Candida albicans,v1,2025-10-20,Genetics,Nucleic Acids Research,10.1093/nar/gkaf1402,2025-11-26,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.10.20.683421_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.10.22.683929_v1,10.1101/2025.10.22.683929,Disruption of a six-nucleotide miRNA motif improves PKD1 dosage and ameliorates polycystic kidney disease,v1,2025-10-22,Genetics,Nucleic Acids Research,10.1093/nar/gkaf1538,2026-01-14,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.10.22.683929_v1.xml,top100_bgm_multi_journals.csv
genetics,10.1101_2025.11.06.686928_v1,10.1101/2025.11.06.686928,Safeguarding Genome Integrity: Polo-like kinase Cdc5 and phosphatase Cdc14 Orchestrate Topoisomerase II-Mediated Catenane Resolution in Mitosis,v1,2025-11-06,Genetics,Nucleic Acids Research,10.1093/nar/gkaf1509,2026-01-14,34,7.776,16.90,extracted_data/November_2025/10.1101_2025.11.06.686928_v1.xml,top100_bgm_multi_journals.csv
genetics,10.64898_2026.01.20.700634_v1,10.64898/2026.01.20.700634,Cruciform-forming AT/TA repeats are acted upon by structure selective endonucleases and Rad51 prior to repositioning to the nuclear periphery for repair,v1,2026-01-20,Genetics,Nucleic Acids Research,10.1093/nar/gkag217,2026-02-24,34,7.776,16.90,extracted_data/January_2026/10.64898_2026.01.20.700634_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.01.616139_v1,10.1101/2024.10.01.616139,"High-coverage allele-resolved single-cell DNA methylation profiling by scDEEP-mC reveals cell lineage, X-inactivation state, and replication dynamics",v1,2024-10-01,Genomics,Nature Communications,10.1038/s41467-025-61589-1,2025-07-08,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.01.616139_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.02.616294_v2,10.1101/2024.10.02.616294,Spatial-scERA: A method for reconstructing spatial single-cell enhancer activity in multicellular organisms,v2,2024-10-02,Genomics,Nucleic Acids Research,10.1093/nar/gkaf684,2025-07-19,34,7.776,16.90,extracted_data/January_2025/10.1101_2024.10.02.616294_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.02.616333_v1,10.1101/2024.10.02.616333,The Platinum Pedigree: A long-read benchmark for genetic variants,v1,2024-10-02,Genomics,Nature Methods,10.1038/s41592-025-02750-y,2025-08,8,17.251,13.51,extracted_data/October_2024/10.1101_2024.10.02.616333_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.03.616013_v1,10.1101/2024.10.03.616013,STAMP: Single-Cell Transcriptomics Analysis and Multimodal Profiling through Imaging,v1,2024-10-03,Genomics,Cell,10.1016/j.cell.2025.05.027,2025-09,3,22.612,30.22,extracted_data/October_2024/10.1101_2024.10.03.616013_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.03.616421_v1,10.1101/2024.10.03.616421,k-mer-based GWAS in a wheat collection reveals novel and diverse sources of powdery mildew resistance,v1,2024-10-03,Genomics,Genome Biology,10.1186/s13059-025-03645-z,2025-06-18,53,5.710,9.04,extracted_data/October_2024/10.1101_2024.10.03.616421_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.09.617511_v1,10.1101/2024.10.09.617511,Chromatin interaction maps of human arterioles reveal new mechanisms for the genetic regulation of blood pressure,v1,2024-10-09,Genomics,Nature Communications,10.1038/s41467-025-61656-7,2025-07-17,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.09.617511_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.11.617734_v1,10.1101/2024.10.11.617734,Early establishment and life course stability of sex biases in the human brain transcriptome,v1,2024-10-11,Genomics,Cell Genomics,10.1016/j.xgen.2025.100890,2025-07,46,6.238,7.85,extracted_data/October_2024/10.1101_2024.10.11.617734_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.11.617832_v1,10.1101/2024.10.11.617832,Pangenome Reveals Gene Content Variations and Structural Variants Contributing to Pig Characteristics,v1,2024-10-11,Genomics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzae081,2025-01-15,98,3.964,7.21,extracted_data/October_2024/10.1101_2024.10.11.617832_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.15.618417_v1,10.1101/2024.10.15.618417,A lineage-specific nascent RNA assay unveils principles of gene regulation in tissue biology,v1,2024-10-15,Genomics,Developmental Cell,10.1016/j.devcel.2025.09.017,2026-02,62,5.180,7.30,extracted_data/October_2024/10.1101_2024.10.15.618417_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.20.619315_v1,10.1101/2024.10.20.619315,Nuclear effects play an important role in determining codon usage-dependent human gene expression,v1,2024-10-20,Genomics,Nature Communications,10.1038/s41467-025-65907-5,2025-12-03,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.20.619315_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.23.619697_v1,10.1101/2024.10.23.619697,A pangenome and pantranscriptome of hexaploid oat,v1,2024-10-23,Genomics,Nature,10.1038/s41586-025-09676-7,2026-01-01,7,18.288,18.47,extracted_data/October_2024/10.1101_2024.10.23.619697_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.23.619753_v1,10.1101/2024.10.23.619753,Accelerated pseudogenization in ancient endosymbionts of giant scale insects,v1,2024-10-23,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf125,2025-06-04,89,4.085,5.04,extracted_data/October_2024/10.1101_2024.10.23.619753_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.27.620451_v1,10.1101/2024.10.27.620451,LEGEND: Identifying Co-expressed Genes in Multimodal Transcriptomic Sequencing Data,v1,2024-10-27,Genomics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf056,2025-09-22,98,3.964,7.21,extracted_data/October_2024/10.1101_2024.10.27.620451_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.28.620566_v1,10.1101/2024.10.28.620566,Adenine DNA methylation associated to transcription is widespread across eukaryotes,v1,2024-10-28,Genomics,Nature Genetics,10.1038/s41588-025-02409-6,2025-12,9,16.586,16.08,extracted_data/October_2024/10.1101_2024.10.28.620566_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.28.620620_v1,10.1101/2024.10.28.620620,GBRAP: A Comprehensive Database and Tool for Exploring Genomic Diversity Across All Domains of Life,v1,2024-10-28,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf114,2025-06-04,89,4.085,5.04,extracted_data/November_2024/10.1101_2024.10.28.620620_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.28.620753_v1,10.1101/2024.10.28.620753,Single-cell atlas of developing mouse palates reveals cellular and molecular transitions in periderm cell fate,v1,2024-10-28,Genomics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf013,2025-05-10,98,3.964,7.21,extracted_data/November_2024/10.1101_2024.10.28.620753_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.10.30.620961_v2,10.1101/2024.10.30.620961,Improved Allele Frequencies in gnomAD through Local Ancestry Inference,v2,2024-10-30,Genomics,Nature Communications,10.1038/s41467-025-63340-2,2025-10-06,71,4.761,14.63,extracted_data/June_2025/10.1101_2024.10.30.620961_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.11.02.621694_v1,10.1101/2024.11.02.621694,Single-cell DNA methylome and 3D genome atlas of the human subcutaneous adipose tissue,v1,2024-11-02,Genomics,Nature Genetics,10.1038/s41588-025-02300-4,2025-09,9,16.586,16.08,extracted_data/November_2024/10.1101_2024.11.02.621694_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.11.05.621973_v1,10.1101/2024.11.05.621973,Evolutionary Dynamics of G-Quadruplexes in Human and Other Great Ape Telomere-to-Telomere Genomes,v1,2024-11-05,Genomics,Genome Biology,10.1186/s13059-025-03635-1,2025-06-11,53,5.710,9.04,extracted_data/November_2024/10.1101_2024.11.05.621973_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.11.11.622808_v1,10.1101/2024.11.11.622808,invertiaDB: A Database of Inverted Repeats Across Organismal Genomes,v1,2024-11-11,Genomics,Nucleic Acids Research,10.1093/nar/gkaf329,2025-04-22,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.11.622808_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.11.13.623439_v1,10.1101/2024.11.13.623439,Regulatory plasticity of the human genome,v1,2024-11-13,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf050,2025-03-08,89,4.085,5.04,extracted_data/November_2024/10.1101_2024.11.13.623439_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.11.14.623513_v2,10.1101/2024.11.14.623513,Telomeric Repeat-Containing RNA Increases in Aged Human Cells,v2,2024-11-14,Genomics,Nucleic Acids Research,10.1093/nar/gkaf597,2025-07-08,34,7.776,16.90,extracted_data/June_2025/10.1101_2024.11.14.623513_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.11.26.625372_v1,10.1101/2024.11.26.625372,Epromoters bind key stress-related transcription factors to regulate clusters of stress response genes,v1,2024-11-26,Genomics,The EMBO Journal,10.1038/s44318-025-00670-3,2026-01-03,68,4.821,7.14,extracted_data/November_2024/10.1101_2024.11.26.625372_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.11.27.625679_v1,10.1101/2024.11.27.625679,A Portable and Scalable Genomic Analysis Pipeline for Streptococcus pneumoniae Surveillance: GPS Pipeline,v1,2024-11-27,Genomics,Nature Communications,10.1038/s41467-025-64018-5,2025-09-24,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.11.27.625679_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.12.02.626500_v1,10.1101/2024.12.02.626500,Skin metatranscriptomics reveals landscape of variation in microbial activity and gene expression across the human body,v1,2024-12-02,Genomics,Nature Biotechnology,10.1038/s41587-025-02797-4,2025-08-28,5,19.006,14.83,extracted_data/December_2024/10.1101_2024.12.02.626500_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.12.09.627454_v1,10.1101/2024.12.09.627454,Mitochondrial DNA mutations in human oocytes undergo frequency-dependent selection but do not increase with age,v1,2024-12-09,Genomics,Science Advances,10.1126/sciadv.adw4954,2025-08-08,79,4.324,12.06,extracted_data/December_2024/10.1101_2024.12.09.627454_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.12.10.627825_v1,10.1101/2024.12.10.627825,Nucleosome dynamics render heterochromatin accessible in living human cells,v1,2024-12-10,Genomics,Nature Communications,10.1038/s41467-025-59994-7,2025-05-16,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.10.627825_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.12.19.629492_v3,10.1101/2024.12.19.629492,Replication stress increases de novo CNVs across the malaria parasite genome,v3,2024-12-19,Genomics,Nucleic Acids Research,10.1093/nar/gkaf1436,2026-01-05,34,7.776,16.90,extracted_data/October_2025/10.1101_2024.12.19.629492_v3.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.12.20.629544_v1,10.1101/2024.12.20.629544,Three-dimensional regulatory hubs support oncogenic programs in glioblastoma,v1,2024-12-20,Genomics,Molecular Cell,10.1016/j.molcel.2025.03.007,2025-04,26,9.051,12.04,extracted_data/December_2024/10.1101_2024.12.20.629544_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.12.23.630102_v1,10.1101/2024.12.23.630102,Methyl-CODEC enables simultaneous methylation and duplex sequencing,v1,2024-12-23,Genomics,Nucleic Acids Research,10.1093/nar/gkaf482,2025-05-22,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.23.630102_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2024.12.23.630206_v3,10.1101/2024.12.23.630206,Cell-cycle-dependent repression of histone gene transcription by histone H4,v3,2024-12-23,Genomics,Nature Structural & Molecular Biology,10.1038/s41594-025-01731-1,2026-01,48,6.187,6.42,extracted_data/October_2025/10.1101_2024.12.23.630206_v3.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.01.02.631056_v1,10.1101/2025.01.02.631056,An endogenous retroviral element co-opts an upstream regulatory sequence to achieve somatic expression and mobility,v1,2025-01-02,Genomics,Nucleic Acids Research,10.1093/nar/gkaf485,2025-06-06,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.02.631056_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.01.02.631136_v2,10.1101/2025.01.02.631136,Ancient DNA reveals diverse community organizations in the 5th millennium BCE Carpathian Basin,v2,2025-01-02,Genomics,Nature Communications,10.1038/s41467-025-60368-2,2025-06-24,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.01.02.631136_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.01.07.631805_v2,10.1101/2025.01.07.631805,"Polygenic backgrounds influence phenotypic consequences of variants in cells, individuals, and populations",v2,2025-01-07,Genomics,Cell Genomics,10.1016/j.xgen.2025.101131,2026-02,46,6.238,7.85,extracted_data/July_2025/10.1101_2025.01.07.631805_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.01.08.631863_v2,10.1101/2025.01.08.631863,Compensatory evolution following deleterious episodes of GC-biased gene conversion in rodents,v2,2025-01-08,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf168,2025-07-01,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.01.08.631863_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.01.17.633399_v1,10.1101/2025.01.17.633399,baal-nf identifies motif-disrupting variants that decrease transcription factor binding affinity,v1,2025-01-17,Genomics,Genome Biology,10.1186/s13059-025-03916-9,2026-01-13,53,5.710,9.04,extracted_data/January_2025/10.1101_2025.01.17.633399_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.01.23.634641_v2,10.1101/2025.01.23.634641,Unraveling the start element and regulatory divergence of core promoters across the domain Bacteria,v2,2025-01-23,Genomics,Nucleic Acids Research,10.1093/nar/gkaf1310,2025-11-13,34,7.776,16.90,extracted_data/June_2025/10.1101_2025.01.23.634641_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.01.28.635350_v1,10.1101/2025.01.28.635350,Multi-tissue transcriptomic aging atlas reveals predictive aging biomarkers in the killifish,v1,2025-01-28,Genomics,Nature Aging,10.1038/s43587-026-01074-6,2026-03-03,37,7.081,8.97,extracted_data/February_2025/10.1101_2025.01.28.635350_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.01.29.635544_v1,10.1101/2025.01.29.635544,Utilizing Genomics to Identify Novel Immunotherapeutic Targets in Multiple Myeloma High-Risk Subgroups,v1,2025-01-29,Genomics,Genome Medicine,10.1186/s13073-025-01503-y,2025-07-15,64,5.078,10.74,extracted_data/February_2025/10.1101_2025.01.29.635544_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.01.31.635566_v2,10.1101/2025.01.31.635566,CiFi: Accurate long-read chromosome conformation capture with low-input requirements,v2,2025-01-31,Genomics,Nature Communications,10.1038/s41467-025-66918-y,2025-12-08,71,4.761,14.63,extracted_data/November_2025/10.1101_2025.01.31.635566_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.01.31.635908_v2,10.1101/2025.01.31.635908,Higher order repeat structures reflect diverging evolutionary paths in maize centromeres and knobs,v2,2025-01-31,Genomics,Genome Biology,10.1186/s13059-026-03993-4,2026-02-14,53,5.710,9.04,extracted_data/January_2026/10.1101_2025.01.31.635908_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.02.635956_v1,10.1101/2025.02.02.635956,Comparative Genomics Reveals LINE-1 Recombination with Diverse RNAs,v1,2025-02-02,Genomics,Cell Genomics,10.1016/j.xgen.2026.101165,2026-02,46,6.238,7.85,extracted_data/February_2025/10.1101_2025.02.02.635956_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.02.636107_v1,10.1101/2025.02.02.636107,Worm Perturb-Seq: massively parallel whole-animal RNAi and RNA-seq,v1,2025-02-02,Genomics,Nature Communications,10.1038/s41467-025-60154-0,2025-05-23,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.02.636107_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.03.635667_v1,10.1101/2025.02.03.635667,"Heterochromatin boundaries maintain centromere position, size and number",v1,2025-02-03,Genomics,Nature Structural & Molecular Biology,10.1038/s41594-025-01706-2,2026-02,48,6.187,6.42,extracted_data/February_2025/10.1101_2025.02.03.635667_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.04.635982_v1,10.1101/2025.02.04.635982,Transcription start sites experience a high influx of heritable variants fuelled by early development,v1,2025-02-04,Genomics,Nature Communications,10.1038/s41467-025-66201-0,2025-11-26,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.04.635982_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.04.636355_v1,10.1101/2025.02.04.636355,Seq-Scope-eXpanded: Spatial Omics Beyond Optical Resolution,v1,2025-02-04,Genomics,Nature Communications,10.1038/s41467-026-69346-8,2026-02-10,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.04.636355_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.04.636496_v1,10.1101/2025.02.04.636496,"Structural variation, selection, and diversification of the NPIP gene family from the human pangenome",v1,2025-02-04,Genomics,Cell Genomics,10.1016/j.xgen.2025.100977,2025-10,46,6.238,7.85,extracted_data/February_2025/10.1101_2025.02.04.636496_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.07.637047_v1,10.1101/2025.02.07.637047,Long-read detection of transposable element mobilization in the soma of hypomethylated Arabidopsis thaliana individuals,v1,2025-02-07,Genomics,Genome Biology,10.1186/s13059-025-03691-7,2025-07-30,53,5.710,9.04,extracted_data/February_2025/10.1101_2025.02.07.637047_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.12.634878_v3,10.1101/2025.02.12.634878,The human IG heavy chain constant gene locus is enriched for large structural variants and coding polymorphisms that vary among human populations,v3,2025-02-12,Genomics,Cell Genomics,10.1016/j.xgen.2025.101058,2026-01,46,6.238,7.85,extracted_data/September_2025/10.1101_2025.02.12.634878_v3.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.12.637140_v1,10.1101/2025.02.12.637140,Integrative Epigenomic Landscape of Alzheimer’s Disease Brains Reveals Oligodendrocyte Molecular Perturbations Associated with Tau,v1,2025-02-12,Genomics,Nature Communications,10.1038/s41467-026-68864-9,2026-03-03,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.12.637140_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.13.637721_v2,10.1101/2025.02.13.637721,Single-cell multiome and spatial profiling reveals pancreas cell type-specific gene regulatory programs driving type 1 diabetes progression,v2,2025-02-13,Genomics,Science Advances,10.1126/sciadv.ady0080,2025-09-12,79,4.324,12.06,extracted_data/March_2025/10.1101_2025.02.13.637721_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.17.638622_v1,10.1101/2025.02.17.638622,The circulating cell-free DNA landscape in sepsis is dominated by impaired liver clearance,v1,2025-02-17,Genomics,Cell Genomics,10.1016/j.xgen.2025.100971,2025-10,46,6.238,7.85,extracted_data/February_2025/10.1101_2025.02.17.638622_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.17.638628_v1,10.1101/2025.02.17.638628,Varigraph: an accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes,v1,2025-02-17,Genomics,Molecular Plant,10.1016/j.molp.2025.08.001,2025-09,57,5.519,13.75,extracted_data/February_2025/10.1101_2025.02.17.638628_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.17.638763_v1,10.1101/2025.02.17.638763,The fire ant social chromosome exerts a major influence on genome regulation,v1,2025-02-17,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf112,2025-06-04,89,4.085,5.04,extracted_data/February_2025/10.1101_2025.02.17.638763_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.21.639467_v1,10.1101/2025.02.21.639467,Cell-type-specific DNA methylation dynamics in the prenatal and postnatal human cortex,v1,2025-02-21,Genomics,Cell Genomics,10.1016/j.xgen.2025.101010,2025-12,46,6.238,7.85,extracted_data/February_2025/10.1101_2025.02.21.639467_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.21.639580_v1,10.1101/2025.02.21.639580,Retroelement co-option disrupts the cancer transcriptional programme,v1,2025-02-21,Genomics,Genome Medicine,10.1186/s13073-025-01479-9,2025-05-07,64,5.078,10.74,extracted_data/February_2025/10.1101_2025.02.21.639580_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.25.639765_v3,10.1101/2025.02.25.639765,A single-nucleus transcriptomic atlas of the adult Aedes aegypti mosquito,v3,2025-02-25,Genomics,Cell,10.1016/j.cell.2025.10.008,2025-12,3,22.612,30.22,extracted_data/October_2025/10.1101_2025.02.25.639765_v3.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.25.640190_v1,10.1101/2025.02.25.640190,Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms with iSCALE,v1,2025-02-25,Genomics,Nature Methods,10.1038/s41592-025-02770-8,2025-09,8,17.251,13.51,extracted_data/March_2025/10.1101_2025.02.25.640190_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.27.640481_v1,10.1101/2025.02.27.640481,Comparative analysis of human and mouse ovaries across age,v1,2025-02-27,Genomics,Science,10.1126/science.adx0659,2025-12-11,19,10.416,15.26,extracted_data/March_2025/10.1101_2025.02.27.640481_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.27.640517_v1,10.1101/2025.02.27.640517,Epigenome and interactome profiling uncovers principles of distal regulation in the barley genome,v1,2025-02-27,Genomics,Cell Genomics,10.1016/j.xgen.2025.101037,2026-01,46,6.238,7.85,extracted_data/March_2025/10.1101_2025.02.27.640517_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.02.28.640567_v1,10.1101/2025.02.28.640567,Phenotypic pleiotropy of missense variants in human B cell-confinement receptor P2RY8,v1,2025-02-28,Genomics,Cell Genomics,10.1016/j.xgen.2025.100981,2025-11,46,6.238,7.85,extracted_data/March_2025/10.1101_2025.02.28.640567_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.01.640912_v1,10.1101/2025.03.01.640912,Saturation mapping of MUTYH variant effects using DNA repair reporters,v1,2025-03-01,Genomics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.07.005,2025-09,74,4.531,7.17,extracted_data/March_2025/10.1101_2025.03.01.640912_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.03.641211_v1,10.1101/2025.03.03.641211,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy,v1,2025-03-03,Genomics,Science,10.1126/science.adx1736,2026-04-02,19,10.416,15.26,extracted_data/March_2025/10.1101_2025.03.03.641211_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.05.641574_v1,10.1101/2025.03.05.641574,Benchmarking Pre-trained Genomic Language Models for RNA Sequence-Related Predictive Applications,v1,2025-03-05,Genomics,Nature Communications,10.1038/s41467-025-66899-y,2025-12-07,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.05.641574_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.06.641712_v1,10.1101/2025.03.06.641712,The modifiers that cause changes in gene essentiality,v1,2025-03-06,Genomics,Cell Systems,10.1016/j.cels.2025.101515,2026-04,65,4.943,5.72,extracted_data/March_2025/10.1101_2025.03.06.641712_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.09.641621_v1,10.1101/2025.03.09.641621,Whole-miRNome sequencing (WMS) - a panel for targeted sequencing of all human miRNA genes,v1,2025-03-09,Genomics,Nucleic Acids Research,10.1093/nar/gkaf812,2025-08-27,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.09.641621_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.14.642805_v1,10.1101/2025.03.14.642805,High-throughput single cell -omics using semi-permeable capsules,v1,2025-03-14,Genomics,Science,10.1126/science.ady7227,2026-03-12,19,10.416,15.26,extracted_data/March_2025/10.1101_2025.03.14.642805_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.14.643250_v1,10.1101/2025.03.14.643250,Long-read transcriptomics of a diverse human cohort reveals widespread ancestry bias in gene annotation,v1,2025-03-14,Genomics,Nature Communications,10.1038/s41467-025-66096-x,2025-12-03,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.14.643250_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.15.643352_v1,10.1101/2025.03.15.643352,Hi-C for genome-wide detection of enhancer-hijacking rearrangements in routine lymphoid cancer biopsies,v1,2025-03-15,Genomics,Cell Genomics,10.1016/j.xgen.2026.101166,2026-02,46,6.238,7.85,extracted_data/March_2025/10.1101_2025.03.15.643352_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.17.643674_v1,10.1101/2025.03.17.643674,Genome-wide ribonucleotide detection in Archaea,v1,2025-03-17,Genomics,Nucleic Acids Research,10.1093/nar/gkaf1231,2025-11-13,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.17.643674_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.21.644463_v2,10.1101/2025.03.21.644463,Enhanced Functional Potential of Pseudogene-associated lncRNA Genes in Mammals,v2,2025-03-21,Genomics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf113,2025-11-24,98,3.964,7.21,extracted_data/March_2025/10.1101_2025.03.21.644463_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.24.644894_v1,10.1101/2025.03.24.644894,Generalist malaria parasites and host imprinting: Unveiling transcriptional memory,v1,2025-03-24,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf198,2025-09-01,89,4.085,5.04,extracted_data/March_2025/10.1101_2025.03.24.644894_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.26.645511_v1,10.1101/2025.03.26.645511,A Single-Cell Atlas of RNA Alternative Splicing in the Glioma-Immune Ecosystem,v1,2025-03-26,Genomics,Genome Biology,10.1186/s13059-025-03889-9,2025-12-12,53,5.710,9.04,extracted_data/March_2025/10.1101_2025.03.26.645511_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.27.645809_v2,10.1101/2025.03.27.645809,Genome-wide dynamic nascent transcript profiles reveal that most paused RNA polymerases terminate,v2,2025-03-27,Genomics,Nucleic Acids Research,10.1093/nar/gkag128,2026-02-05,34,7.776,16.90,extracted_data/December_2025/10.1101_2025.03.27.645809_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.30.646227_v2,10.1101/2025.03.30.646227,A Telomere-to-Telomere Diploid Reference Genome and Centromere Structure of the Chinese Quartet,v2,2025-03-30,Genomics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf118,2025-12-22,98,3.964,7.21,extracted_data/July_2025/10.1101_2025.03.30.646227_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.31.646270_v2,10.1101/2025.03.31.646270,The GSA Family in 2025: A Broadened Sharing Platform for Multi-Omics and Multimodal Data,v2,2025-03-31,Genomics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf072,2025-09-22,98,3.964,7.21,extracted_data/April_2025/10.1101_2025.03.31.646270_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.03.31.646505_v2,10.1101/2025.03.31.646505,Targeted sequencing and iterative assembly of near-complete genomes,v2,2025-03-31,Genomics,Nature Communications,10.1038/s41467-025-65410-x,2025-11-24,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.03.31.646505_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.01.646651_v2,10.1101/2025.04.01.646651,Comparative analysis of mammalian adaptive immune loci revealed spectacular divergence and common genetic patterns,v2,2025-04-01,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf152,2025-07-01,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.04.01.646651_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.02.646807_v2,10.1101/2025.04.02.646807,Historic transposon mobilisation waves create distinct pools of adaptive variants in a major crop pathogen,v2,2025-04-02,Genomics,Nature Communications,10.1038/s41467-025-64944-4,2025-11-12,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.04.02.646807_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.09.647986_v2,10.1101/2025.04.09.647986,Fast and Memory-Efficient Dynamic Programming Approach for Large-Scale EHH-Based Selection Scans,v2,2025-04-09,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf275,2025-10-29,89,4.085,5.04,extracted_data/October_2025/10.1101_2025.04.09.647986_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.15.648976_v1,10.1101/2025.04.15.648976,Cytosine Methylation is a marker of Viral Gene Transfer across the eukaryotes,v1,2025-04-15,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf176,2025-07-30,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.04.15.648976_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.16.649098_v1,10.1101/2025.04.16.649098,Methylation reprogramming associated with aggressive prostate cancer and ancestral disparities,v1,2025-04-16,Genomics,Molecular Systems Biology,10.1038/s44320-025-00153-x,2025-10-07,70,4.783,7.15,extracted_data/April_2025/10.1101_2025.04.16.649098_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.17.649351_v1,10.1101/2025.04.17.649351,The ISW1 and CHD1 chromatin remodelers suppress global nucleosome dynamics in living yeast cells,v1,2025-04-17,Genomics,Science Advances,10.1126/sciadv.adw7108,2025-08,79,4.324,12.06,extracted_data/April_2025/10.1101_2025.04.17.649351_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.17.649361_v2,10.1101/2025.04.17.649361,Domestication shaped the chromatin landscape of grain amaranth,v2,2025-04-17,Genomics,Nature Communications,10.1038/s41467-025-66445-w,2025-11-21,71,4.761,14.63,extracted_data/September_2025/10.1101_2025.04.17.649361_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.21.649844_v1,10.1101/2025.04.21.649844,Systematic cell-type resolved transcriptomes of 8 tissues in 8 lab and wild-derived mouse strains captures global and local expression variation,v1,2025-04-21,Genomics,Cell Genomics,10.1016/j.xgen.2025.101108,2026-04,46,6.238,7.85,extracted_data/April_2025/10.1101_2025.04.21.649844_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.23.650228_v2,10.1101/2025.04.23.650228,Extensive modulation of a conserved cis-regulatory code across 589 grass species,v2,2025-04-23,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf324,2026-01-03,89,4.085,5.04,extracted_data/April_2025/10.1101_2025.04.23.650228_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.24.650404_v1,10.1101/2025.04.24.650404,Chip (Ldb1) is a new cofactor of Zelda forming a functional bridge to CBP during zygotic genome activation,v1,2025-04-24,Genomics,Molecular Cell,10.1016/j.molcel.2025.05.018,2025-06,26,9.051,12.04,extracted_data/April_2025/10.1101_2025.04.24.650404_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.24.650451_v2,10.1101/2025.04.24.650451,Directing stem cell differentiation by chromatin state approximation,v2,2025-04-24,Genomics,Nucleic Acids Research,10.1093/nar/gkag124,2026-02-24,34,7.776,16.90,extracted_data/December_2025/10.1101_2025.04.24.650451_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.04.26.650724_v1,10.1101/2025.04.26.650724,Neighborhood nonnegative matrix factorization identifies patterns and spatially-variable genes in large-scale spatial transcriptomics data,v1,2025-04-26,Genomics,Genome Biology,10.1186/s13059-025-03846-6,2026-01-16,53,5.710,9.04,extracted_data/April_2025/10.1101_2025.04.26.650724_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.05.05.652166_v1,10.1101/2025.05.05.652166,Identification of a novel transcriptome signature for predicting the response to anti-TNF-α treatment in rheumatoid arthritis patients,v1,2025-05-05,Genomics,Annals of the Rheumatic Diseases,10.1016/j.ard.2025.08.003,2026-01,52,5.731,7.66,extracted_data/May_2025/10.1101_2025.05.05.652166_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.05.06.652471_v1,10.1101/2025.05.06.652471,Integrative analysis of RNA binding proteins identifies DDX55 as a novel regulator of 3’UTR isoform diversity,v1,2025-05-06,Genomics,Genome Biology,10.1186/s13059-025-03852-8,2025-11-12,53,5.710,9.04,extracted_data/May_2025/10.1101_2025.05.06.652471_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.05.07.652570_v1,10.1101/2025.05.07.652570,Genome graphs reveal the importance of structural variation in Mycobacterium tuberculosis evolution and drug resistance,v1,2025-05-07,Genomics,Nature Communications,10.1038/s41467-025-65779-9,2025-11-28,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.07.652570_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.05.12.653376_v2,10.1101/2025.05.12.653376,Organism-wide cellular dynamics and epigenomic remodeling in mammalian aging,v2,2025-05-12,Genomics,Science,10.1126/science.adw6273,2026-02-26,19,10.416,15.26,extracted_data/November_2025/10.1101_2025.05.12.653376_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.05.15.654188_v1,10.1101/2025.05.15.654188,Coexisting with humans: genomic and behavioural consequences in a small and isolated bear population,v1,2025-05-15,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf292,2025-11-28,89,4.085,5.04,extracted_data/May_2025/10.1101_2025.05.15.654188_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.05.19.654945_v2,10.1101/2025.05.19.654945,High-throughput mapping of spontaneous mitotic crossover and genome instability events with sci-L3-Strand-seq,v2,2025-05-19,Genomics,Nucleic Acids Research,10.1093/nar/gkag119,2026-02-05,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.19.654945_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.05.26.656133_v1,10.1101/2025.05.26.656133,CRISPR activation screens map the genomic landscape of cancer glycome remodeling,v1,2025-05-26,Genomics,Cell Genomics,10.1016/j.xgen.2026.101139,2026-04,46,6.238,7.85,extracted_data/May_2025/10.1101_2025.05.26.656133_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.05.27.656431_v1,10.1101/2025.05.27.656431,Phased epigenomics and methylation inheritance in a historical Vitis vinifera hybrid,v1,2025-05-27,Genomics,Genome Biology,10.1186/s13059-025-03858-2,2025-11-17,53,5.710,9.04,extracted_data/May_2025/10.1101_2025.05.27.656431_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.06.04.655863_v1,10.1101/2025.06.04.655863,Vascular smooth muscle cell atherosclerosis trajectories characterized at single cell resolution identify causal transcriptomic and epigenomic mechanisms of disease risk,v1,2025-06-04,Genomics,Nature Communications,10.1038/s41467-026-70530-z,2026-03-17,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.04.655863_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.06.10.658807_v1,10.1101/2025.06.10.658807,Histo-LCM-Hi-C reveals the 3D chromatin conformation of spatially localized rare cells in tissues at high resolution,v1,2025-06-10,Genomics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf091,2025-09-30,98,3.964,7.21,extracted_data/June_2025/10.1101_2025.06.10.658807_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.06.10.658877_v1,10.1101/2025.06.10.658877,A spatial long-read approach at near-single-cell resolution reveals developmental regulation of splicing and polyadenylation sites in distinct cortical layers and cell types,v1,2025-06-10,Genomics,Nature Communications,10.1038/s41467-025-63301-9,2025-08-29,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.10.658877_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.06.14.659697_v1,10.1101/2025.06.14.659697,How did evolution halve genome size during an oceanic island colonization?,v1,2025-06-14,Genomics,Molecular Biology and Evolution,10.1093/molbev/msaf206,2025-09-01,89,4.085,5.04,extracted_data/June_2025/10.1101_2025.06.14.659697_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.06.21.660892_v1,10.1101/2025.06.21.660892,Mitochondrial Genome Variants and Nuclear Mitochondrial DNA Segments in 7331 Individuals from NyuWa and 1KGP,v1,2025-06-21,Genomics,"Genomics, Proteomics & Bioinformatics",10.1093/gpbjnl/qzaf098,2025-10-28,98,3.964,7.21,extracted_data/June_2025/10.1101_2025.06.21.660892_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.06.24.660721_v2,10.1101/2025.06.24.660721,MetaGLIMPSE: Meta Imputation of Low Coverage Sequencing Data for Modern and Ancient Genomes,v2,2025-06-24,Genomics,The American Journal of Human Genetics,10.1016/j.ajhg.2026.02.004,2026-03,74,4.531,7.17,extracted_data/September_2025/10.1101_2025.06.24.660721_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.06.26.661849_v1,10.1101/2025.06.26.661849,Simultaneous epigenomic profiling and regulatory activity measurement using e2MPRA,v1,2025-06-26,Genomics,Nature Communications,10.1038/s41467-026-68422-3,2026-01-14,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.06.26.661849_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.07.07.663401_v1,10.1101/2025.07.07.663401,A conserved long-range RNA interaction in SARS-CoV-2 recruits ADAR1 to enhance virus proliferation,v1,2025-07-07,Genomics,Nature Communications,10.1038/s41467-025-63297-2,2025-09-26,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.07.663401_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.07.14.664012_v3,10.1101/2025.07.14.664012,Germline de novo mutation rate of the highly heterozygous amphioxus genome,v3,2025-07-14,Genomics,Molecular Biology and Evolution,10.1093/molbev/msag017,2026-02-02,89,4.085,5.04,extracted_data/August_2025/10.1101_2025.07.14.664012_v3.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.07.14.664827_v1,10.1101/2025.07.14.664827,Isoform-specific single-cell perturb-seq reveals distinct functions of alternative promoters in drug response,v1,2025-07-14,Genomics,Nucleic Acids Research,10.1093/nar/gkag118,2026-02-05,34,7.776,16.90,extracted_data/July_2025/10.1101_2025.07.14.664827_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.07.21.665958_v1,10.1101/2025.07.21.665958,"An image-based transcriptomics atlas reveals the regional and microbiota-dependent molecular, cellular, and spatial structure of the murine gut",v1,2025-07-21,Genomics,Cell Host & Microbe,10.1016/j.chom.2026.01.018,2026-03,38,7.067,11.68,extracted_data/July_2025/10.1101_2025.07.21.665958_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.07.24.666581_v1,10.1101/2025.07.24.666581,AMR-GNN: A multi-representation graph neural network framework to enable genomic antimicrobial resistance prediction,v1,2025-07-24,Genomics,Nature Communications,10.1038/s41467-026-69934-8,2026-03-06,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.24.666581_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.07.31.667863_v2,10.1101/2025.07.31.667863,An absolute quantification atlas of small non-coding RNAs across diverse mammalian tissues and cell lines,v2,2025-07-31,Genomics,Nature Communications,10.1038/s41467-026-68812-7,2026-02-03,71,4.761,14.63,extracted_data/January_2026/10.1101_2025.07.31.667863_v2.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.08.01.668097_v3,10.1101/2025.08.01.668097,Escape from X inactivation drives sex differences in gene expression,v3,2025-08-01,Genomics,Molecular Biology and Evolution,10.1093/molbev/msag050,2026-03-02,89,4.085,5.04,extracted_data/December_2025/10.1101_2025.08.01.668097_v3.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.08.06.668997_v1,10.1101/2025.08.06.668997,Liver single-nucleus multiome profiling reveals cell-type mechanisms for cardiometabolic traits,v1,2025-08-06,Genomics,The American Journal of Human Genetics,10.1016/j.ajhg.2025.11.009,2026-01,74,4.531,7.17,extracted_data/August_2025/10.1101_2025.08.06.668997_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.08.12.669816_v1,10.1101/2025.08.12.669816,When Cells Rebel: a comparative genomics investigation into marsupial cancer susceptibility,v1,2025-08-12,Genomics,Molecular Biology and Evolution,10.1093/molbev/msag010,2026-02-02,89,4.085,5.04,extracted_data/August_2025/10.1101_2025.08.12.669816_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.09.14.676124_v1,10.1101/2025.09.14.676124,SomaMutDB 2.0: A comprehensive database for exploring somatic mutations and their functional impact in normal human tissues,v1,2025-09-14,Genomics,Nucleic Acids Research,10.1093/nar/gkaf1297,2026-01-06,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.14.676124_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.09.20.677549_v1,10.1101/2025.09.20.677549,DNA shape and epigenomics distinguish the mechanistic origin of human genomic structural variations,v1,2025-09-20,Genomics,Nucleic Acids Research,10.1093/nar/gkaf1325,2025-11-26,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.20.677549_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.10.09.681413_v1,10.1101/2025.10.09.681413,Expanding the Landscape of BREX Diversity: Uncovering Multi-Layered Functional Frameworks and Identification of Novel BREX-Related Defense Systems,v1,2025-10-09,Genomics,Nucleic Acids Research,10.1093/nar/gkag035,2026-01-22,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.10.09.681413_v1.xml,top100_bgm_multi_journals.csv
genomics,10.1101_2025.11.11.687715_v1,10.1101/2025.11.11.687715,Differential nucleosome organization in human interphase and metaphase chromosomes,v1,2025-11-11,Genomics,Molecular Systems Biology,10.1038/s44320-026-00192-y,2026-02-02,70,4.783,7.15,extracted_data/November_2025/10.1101_2025.11.11.687715_v1.xml,top100_bgm_multi_journals.csv
immunology_med,10.1101_2024.10.07.617084_v1,10.1101/2024.10.07.617084,"Repertoire, function, and structure of serological antibodies induced by the R21/Matrix-M malaria vaccine",v1,2024-10-07,Immunology,Journal of Experimental Medicine,10.1084/jem.20241908,2025-10-06,75,5.834,8.35,extracted_data/October_2024/10.1101_2024.10.07.617084_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.10.11.617865_v2,10.1101/2024.10.11.617865,CD4+ tissue-resident memory Th17 cells are a major source of IL-17A in Spondyloarthritis synovial tissue,v2,2024-10-11,Immunology,Annals of the Rheumatic Diseases,10.1016/j.ard.2025.04.018,2025-07,79,5.731,7.66,extracted_data/April_2025/10.1101_2024.10.11.617865_v2.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.10.12.618004_v1,10.1101/2024.10.12.618004,Nerve-associated macrophages control adipose homeostasis across lifespan and restrain age-related inflammation,v1,2024-10-12,Immunology,Nature Aging,10.1038/s43587-025-00952-9,2025-09-02,58,7.081,8.97,extracted_data/October_2024/10.1101_2024.10.12.618004_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.10.15.618522_v1,10.1101/2024.10.15.618522,Restriction of innate Tγδ17 cell plasticity by an AP-1 regulatory axis,v1,2024-10-15,Immunology,Nature Immunology,10.1038/s41590-025-02206-7,2025-08,34,10.390,12.14,extracted_data/October_2024/10.1101_2024.10.15.618522_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.10.25.620274_v1,10.1101/2024.10.25.620274,Generation of T cells with reduced off-target cross-reactivities by engineering co-signalling receptors,v1,2024-10-25,Immunology,Nature Biomedical Engineering,10.1038/s41551-025-01563-w,2026-01-02,36,10.105,21.44,extracted_data/October_2024/10.1101_2024.10.25.620274_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.10.25.620344_v2,10.1101/2024.10.25.620344,Systemic inflammation and lymphocyte activation precede rheumatoid arthritis,v2,2024-10-25,Immunology,Science Translational Medicine,10.1126/scitranslmed.adt7214,2025-09-24,64,6.722,13.56,extracted_data/November_2024/10.1101_2024.10.25.620344_v2.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.10.30.620795_v1,10.1101/2024.10.30.620795,"Quality of vaccination-induced T cell responses is conveyed by polyclonality and high, but not maximum, antigen receptor avidity",v1,2024-10-30,Immunology,Science Immunology,10.1126/sciimmunol.adu6730,2025-10-03,48,8.220,13.14,extracted_data/November_2024/10.1101_2024.10.30.620795_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.11.07.622538_v4,10.1101/2024.11.07.622538,"A microenvironment-driven, HLA-II-associated insulin neoantigen elicits persistent memory T cell activation in diabetes",v4,2024-11-07,Immunology,Nature Immunology,10.1038/s41590-025-02343-z,2026-01,34,10.390,12.14,extracted_data/September_2025/10.1101_2024.11.07.622538_v4.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.11.12.623298_v1,10.1101/2024.11.12.623298,International multi-cohort analysis identifies novel framework for quantifying immune dysregulation in critical illness: results of the SUBSPACE consortium,v1,2024-11-12,Immunology,Nature Medicine,10.1038/s41591-025-03956-5,2025-12,10,18.333,22.55,extracted_data/November_2024/10.1101_2024.11.12.623298_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.11.14.621733_v1,10.1101/2024.11.14.621733,Dietary Restriction Enhances CD8⁺ T Cell Ketolysis to Limit Exhaustion and Boost Anti-Tumor Immunity,v1,2024-11-14,Immunology,Nature Metabolism,10.1038/s42255-025-01415-6,2025-12-09,53,7.529,11.55,extracted_data/November_2024/10.1101_2024.11.14.621733_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.11.19.624405_v2,10.1101/2024.11.19.624405,An immunomechanical checkpoint PYK2 governs monocyte-to-macrophage differentiation in pancreatic cancer,v2,2024-11-19,Immunology,Cancer Discovery,10.1158/2159-8290.CD-24-1712,2025-08-04,56,7.283,10.53,extracted_data/May_2025/10.1101_2024.11.19.624405_v2.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.11.21.624746_v2,10.1101/2024.11.21.624746,Diverse priming outcomes under conditions of very rare precursor B cells,v2,2024-11-21,Immunology,Immunity,10.1016/j.immuni.2025.03.003,2025-04,22,12.163,17.48,extracted_data/November_2024/10.1101_2024.11.21.624746_v2.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.11.26.625430_v1,10.1101/2024.11.26.625430,Affinity maturation of antibody responses is mediated by differential plasma cell proliferation,v1,2024-11-26,Immunology,Science,10.1126/science.adr6896,2025-01-24,33,10.416,15.26,extracted_data/December_2024/10.1101_2024.11.26.625430_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.11.27.624796_v1,10.1101/2024.11.27.624796,De novo designed pMHC binders facilitate T cell induced killing of cancer cells,v1,2024-11-27,Immunology,Science,10.1126/science.adv0422,2025-07-24,33,10.416,15.26,extracted_data/December_2024/10.1101_2024.11.27.624796_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.11.28.625793_v1,10.1101/2024.11.28.625793,Design of high specificity binders for peptide-MHC-I complexes,v1,2024-11-28,Immunology,Science,10.1126/science.adv0185,2025-07-24,33,10.416,15.26,extracted_data/November_2024/10.1101_2024.11.28.625793_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.12.06.627130_v3,10.1101/2024.12.06.627130,Vγ1+ γδ T cell-derived IL-4 initiates CD8 T cell immunity,v3,2024-12-06,Immunology,Nature Immunology,10.1038/s41590-025-02397-z,2026-02,34,10.390,12.14,extracted_data/February_2025/10.1101_2024.12.06.627130_v3.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.12.16.628822_v2,10.1101/2024.12.16.628822,De novo design and structure of a peptide-centric TCR mimic binding module,v2,2024-12-16,Immunology,Science,10.1126/science.adv3813,2025-07-24,33,10.416,15.26,extracted_data/April_2025/10.1101_2024.12.16.628822_v2.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.12.18.629206_v1,10.1101/2024.12.18.629206,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,v1,2024-12-18,Immunology,Nature Immunology,10.1038/s41590-025-02291-8,2025-11,34,10.390,12.14,extracted_data/December_2024/10.1101_2024.12.18.629206_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2024.12.27.630350_v1,10.1101/2024.12.27.630350,"Virological and antigenic characteristics of SARS-CoV-2 variants LF.7.2.1, NP.1, and LP.8.1",v1,2024-12-27,Immunology,The Lancet Infectious Diseases,10.1016/S1473-3099(25)00015-5,2025-03,89,5.446,8.68,extracted_data/December_2024/10.1101_2024.12.27.630350_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.01.08.631617_v1,10.1101/2025.01.08.631617,"BASTA, a simple whole blood assay for measuring β-cell antigen specific CD4+ T-cell responses in type 1 diabetes",v1,2025-01-08,Immunology,Science Translational Medicine,10.1126/scitranslmed.adt2124,2025-03-19,64,6.722,13.56,extracted_data/January_2025/10.1101_2025.01.08.631617_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.01.15.633105_v1,10.1101/2025.01.15.633105,IL-9 as a naturally orthogonal cytokine with optimal JAK/STAT signaling for engineered T cell therapy,v1,2025-01-15,Immunology,Immunity,10.1016/j.immuni.2025.10.024,2026-01,22,12.163,17.48,extracted_data/January_2025/10.1101_2025.01.15.633105_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.01.16.633453_v1,10.1101/2025.01.16.633453,Pretransplant targeting of TNFRSF25 and CD25 stimulates recipient Tregs in target tissues ameliorating GVHD post-HSCT,v1,2025-01-16,Immunology,Blood,10.1182/blood.2025028418,2025-11-27,77,5.823,7.31,extracted_data/January_2025/10.1101_2025.01.16.633453_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.01.27.635146_v1,10.1101/2025.01.27.635146,Metabolic Adaptations Rewire CD4 T Cells in a Subset-Specific Manner in Human Critical Illness with and without Sepsis,v1,2025-01-27,Immunology,Nature Immunology,10.1038/s41590-025-02390-6,2026-02,34,10.390,12.14,extracted_data/January_2025/10.1101_2025.01.27.635146_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.02.04.636277_v1,10.1101/2025.02.04.636277,IRF7 controls spontaneous autoimmune germinal center and plasma cell checkpoints,v1,2025-02-04,Immunology,Journal of Experimental Medicine,10.1084/jem.20231882,2025-07-07,75,5.834,8.35,extracted_data/February_2025/10.1101_2025.02.04.636277_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.02.06.635770_v1,10.1101/2025.02.06.635770,Sensory neurons shape macrophage identity via TGF-β signalling,v1,2025-02-06,Immunology,Immunity,10.1016/j.immuni.2025.08.004,2025-10,22,12.163,17.48,extracted_data/February_2025/10.1101_2025.02.06.635770_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.02.07.636999_v1,10.1101/2025.02.07.636999,Mycobacterial infection uncovers plasticity of Kupffer cells,v1,2025-02-07,Immunology,Journal of Hepatology,10.1016/j.jhep.2026.02.024,2026-03,32,10.575,15.48,extracted_data/February_2025/10.1101_2025.02.07.636999_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.02.07.637083_v2,10.1101/2025.02.07.637083,Opposing Functions of Distinct Regulatory T Cell Subsets in Colorectal Cancer,v2,2025-02-07,Immunology,Immunity,10.1016/j.immuni.2025.11.014,2026-01,22,12.163,17.48,extracted_data/February_2025/10.1101_2025.02.07.637083_v2.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.02.20.639306_v1,10.1101/2025.02.20.639306,A Metabolite-Based Resistance Mechanism Against Malaria,v1,2025-02-20,Immunology,Science,10.1126/science.adq6741,2025-06-12,33,10.416,15.26,extracted_data/February_2025/10.1101_2025.02.20.639306_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.02.21.639354_v2,10.1101/2025.02.21.639354,DNA origami vaccines program antigen-focused germinal centers,v2,2025-02-21,Immunology,Science,10.1126/science.adx6291,2026-02-05,33,10.416,15.26,extracted_data/March_2025/10.1101_2025.02.21.639354_v2.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.02.21.639368_v1,10.1101/2025.02.21.639368,"Functional, Immunogenetic, and Structural Convergence in Influenza Immunity between Humans and Macaques",v1,2025-02-21,Immunology,Science Translational Medicine,10.1126/scitranslmed.ady3570,2025-09-10,64,6.722,13.56,extracted_data/February_2025/10.1101_2025.02.21.639368_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.02.27.640612_v2,10.1101/2025.02.27.640612,Phagosome-mediated anti-bacterial immunity is governed by the proton-activated chloride channel in peritoneal macrophages,v2,2025-02-27,Immunology,Journal of Experimental Medicine,10.1084/jem.20250312,2025-11-03,75,5.834,8.35,extracted_data/May_2025/10.1101_2025.02.27.640612_v2.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.03.14.642821_v1,10.1101/2025.03.14.642821,Spatial patterning of fibroblast TGFβ signaling underlies treatment resistance in rheumatoid arthritis,v1,2025-03-14,Immunology,Nature Immunology,10.1038/s41590-025-02386-2,2026-03,34,10.390,12.14,extracted_data/March_2025/10.1101_2025.03.14.642821_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.03.17.643820_v1,10.1101/2025.03.17.643820,Commensal-derived Trehalose Monocorynomycolate Triggers γδ T Cell-driven Protective Ocular Barrier Immunity,v1,2025-03-17,Immunology,Immunity,10.1016/j.immuni.2025.12.007,2026-02,22,12.163,17.48,extracted_data/March_2025/10.1101_2025.03.17.643820_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.03.26.645614_v1,10.1101/2025.03.26.645614,Antibody responses against bacterial glycans affinity mature and diversify in germinal centers,v1,2025-03-26,Immunology,Immunity,10.1016/j.immuni.2026.02.006,2026-03,22,12.163,17.48,extracted_data/April_2025/10.1101_2025.03.26.645614_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.04.24.649726_v1,10.1101/2025.04.24.649726,Scalable TCR synthesis and screening enables antigen reactivity mapping in vitiligo,v1,2025-04-24,Immunology,Immunity,10.1016/j.immuni.2026.01.001,2026-02,22,12.163,17.48,extracted_data/April_2025/10.1101_2025.04.24.649726_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.04.30.651462_v1,10.1101/2025.04.30.651462,"Antigenic and Virological Characteristics of SARS-CoV-2 Variant BA.3.2, XFG, and NB.1.8.1",v1,2025-04-30,Immunology,The Lancet Infectious Diseases,10.1016/S1473-3099(25)00308-1,2025-07,89,5.446,8.68,extracted_data/May_2025/10.1101_2025.04.30.651462_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.05.05.652112_v1,10.1101/2025.05.05.652112,Th9-endothelial cell crosstalk promotes inflammatory atherosclerotic cardiovascular disease,v1,2025-05-05,Immunology,Annals of the Rheumatic Diseases,10.1016/j.ard.2025.11.008,2025-12,79,5.731,7.66,extracted_data/May_2025/10.1101_2025.05.05.652112_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.05.06.652168_v1,10.1101/2025.05.06.652168,Specific Pathogen Free Ten Gene-Edited Pig Donor for Xenotransplantation,v1,2025-05-06,Immunology,Protein & Cell,10.1093/procel/pwaf075,2025-12-01,92,5.392,7.91,extracted_data/May_2025/10.1101_2025.05.06.652168_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.06.03.657601_v1,10.1101/2025.06.03.657601,Spatial transcriptomic analysis of muscle biopsy from treatment-naive juvenile dermatomyositis patients reveals mitochondrial abnormalities despite disease-related interferon driven signature,v1,2025-06-03,Immunology,Annals of the Rheumatic Diseases,10.1016/j.ard.2025.07.015,2025-10,79,5.731,7.66,extracted_data/June_2025/10.1101_2025.06.03.657601_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.06.13.659476_v1,10.1101/2025.06.13.659476,HIF-1α+ CD4 T cells coordinate a tissue resident immune cell network in the lung,v1,2025-06-13,Immunology,Immunity,10.1016/j.immuni.2026.01.023,2026-04,22,12.163,17.48,extracted_data/June_2025/10.1101_2025.06.13.659476_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.07.31.667878_v1,10.1101/2025.07.31.667878,Immune cell senescence drives responsiveness to immunotherapy in melanoma,v1,2025-07-31,Immunology,Molecular Cancer,10.1186/s12943-025-02517-1,2025-12-10,39,9.263,30.30,extracted_data/August_2025/10.1101_2025.07.31.667878_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.08.25.672130_v1,10.1101/2025.08.25.672130,Tissue-specific clonal selection and differentiation of CD4⁺ T cells during infection,v1,2025-08-25,Immunology,Nature Immunology,10.1038/s41590-026-02451-4,2026-04,34,10.390,12.14,extracted_data/August_2025/10.1101_2025.08.25.672130_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.09.18.676877_v1,10.1101/2025.09.18.676877,Long-lived IgE plasma cells that reside in the spleen contribute to the persistence of the IgE response,v1,2025-09-18,Immunology,Immunity,10.1016/j.immuni.2025.10.011,2025-11,22,12.163,17.48,extracted_data/September_2025/10.1101_2025.09.18.676877_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.10.30.685663_v1,10.1101/2025.10.30.685663,B lymphocytes that enter the germinal center late preferentially differentiate into memory cells that recognize subdominant epitopes,v1,2025-10-30,Immunology,Immunity,10.1016/j.immuni.2026.01.027,2026-04,22,12.163,17.48,extracted_data/November_2025/10.1101_2025.10.30.685663_v1.xml,top100_med_multi_journals.csv
immunology_med,10.1101_2025.11.06.686519_v1,10.1101/2025.11.06.686519,Antibody-mediated feedback modulates interclonal competition in the germinal center,v1,2025-11-06,Immunology,Immunity,10.1016/j.immuni.2026.01.008,2026-03,22,12.163,17.48,extracted_data/November_2025/10.1101_2025.11.06.686519_v1.xml,top100_med_multi_journals.csv
immunology_med,10.64898_2025.12.29.696921_v1,10.64898/2025.12.29.696921,Regulation of STING activation by phosphoinositide and cholesterol,v1,2025-12-29,Immunology,Nature,10.1038/s41586-025-10076-0,2026-04-09,11,18.288,18.47,extracted_data/December_2025/10.64898_2025.12.29.696921_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.01.24314741_v1,10.1101/2024.10.01.24314741,CD206+IL-4Rα+ MACROPHAGES ARE DRIVERS OF ADVERSE CARDIAC REMODELING IN ISCHEMIC CARDIOMYOPATHY,v1,2024-10-01,Cardiovascular Medicine,Circulation,10.1161/CIRCULATIONAHA.124.072411,2025-07-29,43,8.668,13.55,extracted_data_medrxiv/October_2024/10.1101_2024.10.01.24314741_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.07.24315039_v1,10.1101/2024.10.07.24315039,A Novel Dataset for Nuclei and Tissue Segmentation in Melanoma with baseline nuclei segmentation and tissue segmentation benchmarks,v1,2024-10-07,Pathology,GigaScience,10.1093/gigascience/giaf011,2025-01-06,95,5.314,3.65,extracted_data_medrxiv/October_2024/10.1101_2024.10.07.24315039_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.09.24315144_v1,10.1101/2024.10.09.24315144,Cytomegalovirus infection protects against metastatic melanoma and modulates oncological outcome and toxicity to checkpoint immunotherapy,v1,2024-10-09,Oncology,Nature Medicine,10.1038/s41591-025-03647-1,2025-07,10,18.333,22.55,extracted_data_medrxiv/October_2024/10.1101_2024.10.09.24315144_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.10.24315203_v1,10.1101/2024.10.10.24315203,Genome-wide association study in chondrocalcinosis reveals ENPP1 as a candidate therapeutic target in calcium pyrophosphate deposition disease,v1,2024-10-10,Rheumatology,Annals of the Rheumatic Diseases,10.1016/j.ard.2025.04.002,2025-06,79,5.731,7.66,extracted_data_medrxiv/October_2024/10.1101_2024.10.10.24315203_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.11.24315237_v1,10.1101/2024.10.11.24315237,Association of Gene Variant Type and Location with Breast Cancer Risk in the General Population,v1,2024-10-11,Genetic and Genomic Medicine,Annals of Oncology,10.1016/j.annonc.2025.04.010,2025-08,7,19.072,22.61,extracted_data_medrxiv/October_2024/10.1101_2024.10.11.24315237_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.11.24315357_v1,10.1101/2024.10.11.24315357,Risk of Incident Atrial Fibrillation in Women with a History of Hypertensive Disorders of Pregnancy: A Population-Based Retrospective Cohort Study,v1,2024-10-11,Cardiovascular Medicine,Circulation,10.1161/CIRCULATIONAHA.124.072418,2025-02-18,43,8.668,13.55,extracted_data_medrxiv/October_2024/10.1101_2024.10.11.24315357_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.14.24315279_v2,10.1101/2024.10.14.24315279,Population-Specific Polygenic Risk Scores Developed for the Han Chinese,v2,2024-10-14,Genetic and Genomic Medicine,Nature,10.1038/s41586-025-09350-y,2025-12-04,11,18.288,18.47,extracted_data_medrxiv/August_2025/10.1101_2024.10.14.24315279_v2.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.14.24315441_v1,10.1101/2024.10.14.24315441,Antibiotic use in the past 8 years and gut microbiota composition,v1,2024-10-14,Epidemiology,Nature Medicine,10.1038/s41591-026-04284-y,2026-03-11,10,18.333,22.55,extracted_data_medrxiv/October_2024/10.1101_2024.10.14.24315441_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.15.24315473_v1,10.1101/2024.10.15.24315473,"Safety and efficacy of the blood-stage malaria vaccine RH5.1/Matrix-M in Burkina Faso: interim results of a double-blind, randomised, controlled phase 2b trial in children",v1,2024-10-15,Infectious Diseases (except HIV/AIDS),The Lancet Infectious Diseases,10.1016/S1473-3099(24)00752-7,2025-05,89,5.446,8.68,extracted_data_medrxiv/October_2024/10.1101_2024.10.15.24315473_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.28.24316149_v1,10.1101/2024.10.28.24316149,Organ damage proteomic signature identifies patients with MASLD at-risk of systemic complications,v1,2024-10-28,Gastroenterology,Hepatology,10.1097/HEP.0000000000001346,2026-03,85,5.557,9.55,extracted_data_medrxiv/November_2024/10.1101_2024.10.28.24316149_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.29.24316289_v2,10.1101/2024.10.29.24316289,"Safety and efficacy of long-term gantenerumab treatment in dominantly inherited Alzheimer’s disease: an open label extension of the phase 2/3 multicentre, randomised, double-blind, placebo-controlled platform DIAN-TU Trial",v2,2024-10-29,Neurology,The Lancet Neurology,10.1016/S1474-4422(25)00024-9,2025-04,25,11.729,10.20,extracted_data_medrxiv/January_2025/10.1101_2024.10.29.24316289_v2.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.31.24316514_v1,10.1101/2024.10.31.24316514,Immune history shapes human antibody responses to H5N1 influenza viruses,v1,2024-10-31,Infectious Diseases (except HIV/AIDS),Nature Medicine,10.1038/s41591-025-03599-6,2025-05,10,18.333,22.55,extracted_data_medrxiv/November_2024/10.1101_2024.10.31.24316514_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.31.24316518_v1,10.1101/2024.10.31.24316518,Concordance between amyloid-PET quantification and real-world visual reads: results from IDEAS,v1,2024-10-31,Neurology,JAMA Neurology,10.1001/jamaneurol.2025.2218,2025-09-01,69,6.237,9.82,extracted_data_medrxiv/November_2024/10.1101_2024.10.31.24316518_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.10.31.24316538_v1,10.1101/2024.10.31.24316538,Spatially resolved mapping of cells associated with human complex traits,v1,2024-10-31,Genetic and Genomic Medicine,Nature,10.1038/s41586-025-08757-x,2025-05-22,11,18.288,18.47,extracted_data_medrxiv/November_2024/10.1101_2024.10.31.24316538_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.11.13.24317295_v1,10.1101/2024.11.13.24317295,The Impact of Fontan Circulatory Failure on Heart Transplant Survival: A 20 Center Retrospective Cohort Study,v1,2024-11-13,Transplantation,Circulation,10.1161/CIRCULATIONAHA.124.072961,2025-08-26,43,8.668,13.55,extracted_data_medrxiv/November_2024/10.1101_2024.11.13.24317295_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.11.18.24316975_v1,10.1101/2024.11.18.24316975,"Epidemiological and Clinical Features of Mpox during the Clade Ib Outbreak in South-Kivu, Democratic Republic of the Congo: a Prospective Cohort Study",v1,2024-11-18,Infectious Diseases (except HIV/AIDS),The Lancet,10.1016/S0140-6736(25)00047-9,2025-02,23,12.113,12.12,extracted_data_medrxiv/November_2024/10.1101_2024.11.18.24316975_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.11.19.24317587_v1,10.1101/2024.11.19.24317587,DNA Methylation Signatures of Cardiovascular Health Provide Insights into Diseases,v1,2024-11-19,Epidemiology,Circulation,10.1161/CIRCULATIONAHA.124.073181,2025-08-19,43,8.668,13.55,extracted_data_medrxiv/November_2024/10.1101_2024.11.19.24317587_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.11.22.24317484_v3,10.1101/2024.11.22.24317484,Group 2 and 3 ABC-transporter-dependent capsular K-loci contribute significantly to variation in the estimated invasive potential of Escherichia coli,v3,2024-11-22,Infectious Diseases (except HIV/AIDS),Nature Microbiology,10.1038/s41564-026-02283-w,2026-03-25,60,6.893,12.22,extracted_data_medrxiv/November_2025/10.1101_2024.11.22.24317484_v3.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.12.03.24318392_v2,10.1101/2024.12.03.24318392,"Parent-of-Origin inference and its role in the genetic architecture of complex traits: evidence from ∼265,000 individuals",v2,2024-12-03,Genetic and Genomic Medicine,Nature,10.1038/s41586-025-09357-5,2025-10-16,11,18.288,18.47,extracted_data_medrxiv/January_2025/10.1101_2024.12.03.24318392_v2.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.12.06.24318164_v1,10.1101/2024.12.06.24318164,Rifaximin does not increase the rate of 30-day mortality in patients with cirrhosis and daptomycin in two National US-based cohorts,v1,2024-12-06,Gastroenterology,Gastroenterology,10.1053/j.gastro.2025.03.014,2025-08,57,7.195,7.19,extracted_data_medrxiv/December_2024/10.1101_2024.12.06.24318164_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2024.12.23.24319549_v1,10.1101/2024.12.23.24319549,A significant role for maternal genetic nurture in the risk architecture of attention-deficit/hyperactivity disorder,v1,2024-12-23,Psychiatry and Clinical Psychology,American Journal of Psychiatry,10.1176/appi.ajp.20230383,2025-08-01,97,5.270,6.67,extracted_data_medrxiv/December_2024/10.1101_2024.12.23.24319549_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.01.03.25319979_v3,10.1101/2025.01.03.25319979,Hotspots of human mutation point to clonal expansions in spermatogonia,v3,2025-01-03,Genetic and Genomic Medicine,Nature,10.1038/s41586-025-09579-7,2025-11-13,11,18.288,18.47,extracted_data_medrxiv/August_2025/10.1101_2025.01.03.25319979_v3.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.01.04.25319995_v2,10.1101/2025.01.04.25319995,"Brain-heart-eye axis revealed by multi-organ imaging, genetics and proteomics",v2,2025-01-04,Health Informatics,Nature Biomedical Engineering,10.1038/s41551-025-01506-5,2025-09-30,36,10.105,21.44,extracted_data_medrxiv/June_2025/10.1101_2025.01.04.25319995_v2.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.01.12.25320422_v1,10.1101/2025.01.12.25320422,"Correlates and Consequences of Clonal Hematopoiesis Expansion Rate: A 15-Year Longitudinal Study of 6,986 Women",v1,2025-01-12,Hematology,Blood,10.1182/blood.2025028417,2025-08-28,77,5.823,7.31,extracted_data_medrxiv/January_2025/10.1101_2025.01.12.25320422_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.01.13.25320447_v1,10.1101/2025.01.13.25320447,Salt warning labels in the out-of-home food sector: online and real-world randomised controlled trials,v1,2025-01-13,Public and Global Health,The Lancet Public Health,10.1016/S2468-2667(25)00143-4,2025-08,45,8.408,12.97,extracted_data_medrxiv/January_2025/10.1101_2025.01.13.25320447_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.01.13.25320453_v1,10.1101/2025.01.13.25320453,The engineered monoclonal antibody tobevibart enhances HBsAg capture by Fc receptor positive cells leading to activation of HBV-specific T cells,v1,2025-01-13,Infectious Diseases (except HIV/AIDS),Journal of Hepatology,10.1016/j.jhep.2025.08.016,2026-01,32,10.575,15.48,extracted_data_medrxiv/January_2025/10.1101_2025.01.13.25320453_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.01.16.25320691_v1,10.1101/2025.01.16.25320691,Standardized Measurement of Type 1 Diabetes Polygenic Risk Across Multi-Ancestry Population Cohorts,v1,2025-01-16,Endocrinology,Diabetes Care,10.2337/dc25-0142,2025-06-01,66,6.566,13.05,extracted_data_medrxiv/January_2025/10.1101_2025.01.16.25320691_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.01.21.25320876_v1,10.1101/2025.01.21.25320876,Treatment outcomes of bedaquiline-resistant tuberculosis: a retrospective and matched cohort study,v1,2025-01-21,Infectious Diseases (except HIV/AIDS),The Lancet Infectious Diseases,10.1016/S1473-3099(25)00218-X,2025-10,89,5.446,8.68,extracted_data_medrxiv/January_2025/10.1101_2025.01.21.25320876_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.01.28.25320930_v1,10.1101/2025.01.28.25320930,Contemporary Burden of Cardiovascular Disease in Pregnancy: Insights from a Real-World Pregnancy Electronic Health Record Cohort,v1,2025-01-28,Cardiovascular Medicine,Circulation,10.1161/CIRCULATIONAHA.125.074692,2025-10-14,43,8.668,13.55,extracted_data_medrxiv/January_2025/10.1101_2025.01.28.25320930_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.01.30.25321437_v1,10.1101/2025.01.30.25321437,Mitochondrial and Stress-Related Psychobiological Regulation of FGF21 in Humans,v1,2025-01-30,Endocrinology,Nature Metabolism,10.1038/s42255-025-01388-6,2025-10-14,53,7.529,11.55,extracted_data_medrxiv/February_2025/10.1101_2025.01.30.25321437_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.02.03.25320178_v1,10.1101/2025.02.03.25320178,Genetic liability to physical health conditions influences comorbidities in individuals with severe mental illness,v1,2025-02-03,Genetic and Genomic Medicine,The Lancet Psychiatry,10.1016/S2215-0366(25)00123-3,2025-06,54,7.458,7.51,extracted_data_medrxiv/February_2025/10.1101_2025.02.03.25320178_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.02.06.25321803_v5,10.1101/2025.02.06.25321803,"Refining the generation, interpretation, and application of multi-organ, multi-omics biological aging clocks",v5,2025-02-06,Genetic and Genomic Medicine,Nature Aging,10.1038/s43587-025-00928-9,2025-08-05,58,7.081,8.97,extracted_data_medrxiv/June_2025/10.1101_2025.02.06.25321803_v5.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.02.25.25322830_v1,10.1101/2025.02.25.25322830,Genetic subtyping of obesity reveals biological insights into the uncoupling of adiposity from its cardiometabolic comorbidities,v1,2025-02-25,Genetic and Genomic Medicine,Nature Medicine,10.1038/s41591-025-03931-0,2025-11,10,18.333,22.55,extracted_data_medrxiv/March_2025/10.1101_2025.02.25.25322830_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.03.17.25324099_v1,10.1101/2025.03.17.25324099,Leveraging tissue-resident memory T cells for non-invasive immune monitoring via microneedle skin patches,v1,2025-03-17,Allergy and Immunology,Nature Biomedical Engineering,10.1038/s41551-026-01617-7,2026-03-02,36,10.105,21.44,extracted_data_medrxiv/March_2025/10.1101_2025.03.17.25324099_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.03.25.25324642_v1,10.1101/2025.03.25.25324642,Conceptual framework of women’s food environments and determinants of food acquisition and dietary intakes in low- and middle-income countries: a systematic scoping review,v1,2025-03-25,Nutrition,The Lancet Planetary Health,10.1016/j.lanplh.2025.06.004,2025-08,68,6.386,11.39,extracted_data_medrxiv/March_2025/10.1101_2025.03.25.25324642_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.03.28.25324858_v1,10.1101/2025.03.28.25324858,Reinfection with SARS-CoV-2 in the Omicron Era is Associated with Increased Risk of Post-Acute Sequelae of SARS-CoV-2 Infection: A RECOVER-EHR Cohort Study,v1,2025-03-28,Infectious Diseases (except HIV/AIDS),The Lancet Infectious Diseases,10.1016/S1473-3099(25)00476-1,2026-02,89,5.446,8.68,extracted_data_medrxiv/March_2025/10.1101_2025.03.28.25324858_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.04.09.25325458_v3,10.1101/2025.04.09.25325458,Performance of Universal and Stratified Computer-Aided Detection Thresholds for Chest X-Ray-Based Tuberculosis Screening: A Cross-Sectional Diagnostic Accuracy Study,v3,2025-04-09,Infectious Diseases (except HIV/AIDS),The Lancet Digital Health,10.1016/j.landig.2025.100934,2025-12,61,6.838,15.30,extracted_data_medrxiv/August_2025/10.1101_2025.04.09.25325458_v3.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.04.15.25325909_v1,10.1101/2025.04.15.25325909,Leveraging a genetic proxy to investigate the effects of lifelong cardiac sodium channel blockade,v1,2025-04-15,Cardiovascular Medicine,Circulation,10.1161/CIRCULATIONAHA.125.075057,2025-12-16,43,8.668,13.55,extracted_data_medrxiv/April_2025/10.1101_2025.04.15.25325909_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.04.25.25326432_v1,10.1101/2025.04.25.25326432,Array Genotyping of Transfusion Relevant Blood Cell Antigens in 6946 Ancestrally Diverse Subjects,v1,2025-04-25,Hematology,Blood,10.1182/blood.2025028902,2025-09-18,77,5.823,7.31,extracted_data_medrxiv/May_2025/10.1101_2025.04.25.25326432_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.05.01.25326429_v1,10.1101/2025.05.01.25326429,Genetic and Epigenetic Dysregulation of CR1 is Associated with Catastrophic Antiphospholipid Syndrome (CAPS),v1,2025-05-01,Rheumatology,Annals of the Rheumatic Diseases,10.1016/j.ard.2025.07.016,2025-12,79,5.731,7.66,extracted_data_medrxiv/May_2025/10.1101_2025.05.01.25326429_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.05.05.25326880_v1,10.1101/2025.05.05.25326880,Unravelling the molecular mechanisms causal to type 2 diabetes across global populations and disease-relevant tissues,v1,2025-05-05,Endocrinology,Nature Metabolism,10.1038/s42255-025-01444-1,2026-01-27,53,7.529,11.55,extracted_data_medrxiv/May_2025/10.1101_2025.05.05.25326880_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.05.12.25325832_v2,10.1101/2025.05.12.25325832,Comprehensive investigation of DNA damage repair genes in children with cancer identifies SMARCAL1 as novel osteosarcoma predisposition gene,v2,2025-05-12,Genetic and Genomic Medicine,Journal of Clinical Oncology,10.1200/JCO-25-01114,2025-12-20,29,11.205,13.85,extracted_data_medrxiv/June_2025/10.1101_2025.05.12.25325832_v2.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.05.13.25327542_v1,10.1101/2025.05.13.25327542,Quantifying the waning of humoral immunity,v1,2025-05-13,Allergy and Immunology,Immunity,10.1016/j.immuni.2025.11.007,2025-12,22,12.163,17.48,extracted_data_medrxiv/May_2025/10.1101_2025.05.13.25327542_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.05.22.25328177_v2,10.1101/2025.05.22.25328177,Polygenic Risk and Rare Variants in Endotypes of Idiopathic Pulmonary Fibrosis,v2,2025-05-22,Genetic and Genomic Medicine,The Lancet Respiratory Medicine,10.1016/S2213-2600(25)00405-9,2026-04,63,6.788,9.38,extracted_data_medrxiv/June_2025/10.1101_2025.05.22.25328177_v2.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.05.28.25328344_v1,10.1101/2025.05.28.25328344,Advancing CNS tumor diagnostics with expanded DNA methylation-based classification,v1,2025-05-28,Oncology,Cancer Cell,10.1016/j.ccell.2025.11.002,2026-02,8,19.027,24.69,extracted_data_medrxiv/May_2025/10.1101_2025.05.28.25328344_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.06.11.25328898_v1,10.1101/2025.06.11.25328898,"Safety of MVA-BN in Healthcare Personnel, Democratic Republic of the Congo",v1,2025-06-11,Infectious Diseases (except HIV/AIDS),The Lancet Infectious Diseases,10.1016/S1473-3099(25)00779-0,2026-03,89,5.446,8.68,extracted_data_medrxiv/June_2025/10.1101_2025.06.11.25328898_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.06.16.25329669_v1,10.1101/2025.06.16.25329669,"A non-local diffusion magnetic resonance imaging tract density biomarker to stratify, predict, and interpret survival rates in human glioblastoma",v1,2025-06-16,Neurology,Neuro-Oncology,10.1093/neuonc/noaf234,2026-02-01,59,6.974,8.79,extracted_data_medrxiv/June_2025/10.1101_2025.06.16.25329669_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.06.20.25329138_v1,10.1101/2025.06.20.25329138,Polygenic Background and Penetrance of Pathogenic Variants in Hypertrophic and Dilated Cardiomyopathies,v1,2025-06-20,Cardiovascular Medicine,JAMA Cardiology,10.1001/jamacardio.2025.4739,2026-02-01,71,5.936,6.24,extracted_data_medrxiv/June_2025/10.1101_2025.06.20.25329138_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.06.20.25329850_v1,10.1101/2025.06.20.25329850,Global estimates of tuberculosis incidence during pregnancy and postpartum: a rapid review and modelling analysis,v1,2025-06-20,Epidemiology,The Lancet Global Health,10.1016/S2214-109X(25)00431-0,2026-03,73,5.870,6.75,extracted_data_medrxiv/June_2025/10.1101_2025.06.20.25329850_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.06.21.25330030_v3,10.1101/2025.06.21.25330030,Immune Checkpoint Inhibitors as Independent and Synergistic Drivers of SJS/TEN: An Analysis of FAERS,v3,2025-06-21,Dermatology,JAMA Oncology,10.1001/jamaoncol.2025.4349,2025-12-01,46,8.377,8.32,extracted_data_medrxiv/August_2025/10.1101_2025.06.21.25330030_v3.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.07.01.25330665_v2,10.1101/2025.07.01.25330665,Phenotypic Selectivity of Artificial Intelligence-enhanced Electrocardiography in Cardiovascular Diagnosis and Risk Prediction,v2,2025-07-01,Cardiovascular Medicine,Circulation,10.1161/CIRCULATIONAHA.125.076279,2025-11-04,43,8.668,13.55,extracted_data_medrxiv/August_2025/10.1101_2025.07.01.25330665_v2.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.07.17.25330632_v1,10.1101/2025.07.17.25330632,"The impact of ancestry on performance of type 1 diabetes genetic risk scores: high discrimination performance is maintained in African ancestry populations, but population specific thresholds may improve risk prediction",v1,2025-07-17,Genetic and Genomic Medicine,Diabetes Care,10.2337/dc25-1833,2026-03-01,66,6.566,13.05,extracted_data_medrxiv/July_2025/10.1101_2025.07.17.25330632_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.07.28.25332074_v1,10.1101/2025.07.28.25332074,AAV9 Gene Therapy in GM1 Gangliosidosis Type II: A Phase 1/2 Trial,v1,2025-07-28,Genetic and Genomic Medicine,New England Journal of Medicine,10.1056/NEJMoa2510935,2026-03-26,6,19.076,18.37,extracted_data_medrxiv/July_2025/10.1101_2025.07.28.25332074_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.07.31.25332510_v1,10.1101/2025.07.31.25332510,Combination of heart failure and atrial fibrillation worsens ethnicity-related disparity: An individual patient-level meta-analysis of randomised trials,v1,2025-07-31,Cardiovascular Medicine,European Journal of Heart Failure,10.1093/ejhf/xuag017,2026-02-24,84,5.559,5.97,extracted_data_medrxiv/August_2025/10.1101_2025.07.31.25332510_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.09.11.25335563_v1,10.1101/2025.09.11.25335563,Psychiatric comorbidities in substance use disorders: Sex-based differences in a national real-world clinic sample,v1,2025-09-11,Addiction Medicine,American Journal of Psychiatry,10.1176/appi.ajp.20250828,2026-03-11,97,5.270,6.67,extracted_data_medrxiv/September_2025/10.1101_2025.09.11.25335563_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.09.25.25336313_v1,10.1101/2025.09.25.25336313,Spatial Transcriptomics Characterisation of Radionecrotic Changes in Glioblastoma Patients,v1,2025-09-25,Oncology,Neuro-Oncology,10.1093/neuonc/noag026,2026-02-05,59,6.974,8.79,extracted_data_medrxiv/October_2025/10.1101_2025.09.25.25336313_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.1101_2025.10.24.25338574_v1,10.1101/2025.10.24.25338574,Authors self-disclosed use of artificial intelligence in research submissions to 49 biomedical journals: A cross-sectional study,v1,2025-10-24,Health Informatics,JAMA,10.1001/jama.2025.25688,2026-02-24,94,5.352,6.96,extracted_data_medrxiv/October_2025/10.1101_2025.10.24.25338574_v1.xml,top100_med_multi_journals.csv
medrxiv_med60,10.64898_2026.02.02.26345378_v1,10.64898/2026.02.02.26345378,Vaccine-Elicited Antibody Responses to Influenza H3N2 Subclade K,v1,2026-02-02,Infectious Diseases (except HIV/AIDS),JAMA,10.1001/jama.2026.2173,2026-04-14,94,5.352,6.96,extracted_data_medrxiv/February_2026/10.64898_2026.02.02.26345378_v1.xml,top100_med_multi_journals.csv
microbiology_imm_micro,10.1101_2024.10.01.615302_v1,10.1101/2024.10.01.615302,A unique bacterial family strikes again!,v1,2024-10-01,Microbiology,Trends in Microbiology,10.1016/j.tim.2024.10.002,2024-12,44,3.152,8.98,extracted_data/October_2024/10.1101_2024.10.01.615302_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.01.616123_v1,10.1101/2024.10.01.616123,Group B streptococci lyse endothelial cells to infect the brain in a zebrafish meningitis model,v1,2024-10-01,Microbiology,PLOS Biology,10.1371/journal.pbio.3003236,2025-07-03,55,2.691,5.46,extracted_data/October_2024/10.1101_2024.10.01.616123_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.06.616857_v1,10.1101/2024.10.06.616857,Similarity-weighted entropy for quantifying genetic diversity in viral quasispecies,v1,2024-10-06,Microbiology,Virus Evolution,10.1093/ve/veaf029,2025-05-15,78,1.900,3.75,extracted_data/October_2024/10.1101_2024.10.06.616857_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.08.617280_v2,10.1101/2024.10.08.617280,Gut Bacteria Metabolize Natural and Synthetic Steroid Hormones via the Reductive OsrABC Pathway,v2,2024-10-08,Microbiology,Cell Host & Microbe,10.1016/j.chom.2025.09.014,2025-11,11,7.067,11.68,extracted_data/September_2025/10.1101_2024.10.08.617280_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.16.618562_v3,10.1101/2024.10.16.618562,The major pathogen Haemophilus influenzae experiences pervasive recombination and purifying selection at local and global scales,v3,2024-10-16,Microbiology,Nature Microbiology,10.1038/s41564-025-02171-9,2025-10-31,12,6.893,12.22,extracted_data/August_2025/10.1101_2024.10.16.618562_v3.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.16.618764_v1,10.1101/2024.10.16.618764,Identification of SLC35A1 as an essential host factor for the transduction of multi-serotype recombinant adeno-associated virus (AAV) vectors,v1,2024-10-16,Microbiology,mBio,10.1128/mbio.03268-24,2025-01-08,80,1.885,4.35,extracted_data/October_2024/10.1101_2024.10.16.618764_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.18.619132_v1,10.1101/2024.10.18.619132,Non-lytic spread of poliovirus requires the nonstructural protein 3CD,v1,2024-10-18,Microbiology,mBio,10.1128/mbio.03276-24,2025-01-08,80,1.885,4.35,extracted_data/October_2024/10.1101_2024.10.18.619132_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.21.619359_v1,10.1101/2024.10.21.619359,Fatty acid desaturases link cell metabolism pathways to promote proliferation of Epstein-Barr virus-infected B cells,v1,2024-10-21,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1012685,2025-05-22,74,1.987,4.73,extracted_data/October_2024/10.1101_2024.10.21.619359_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.21.619384_v1,10.1101/2024.10.21.619384,Priority effects of heritable seed-borne bacteria drive early assembly of the wheat rhizosphere microbiome,v1,2024-10-21,Microbiology,Nature Microbiology,10.1038/s41564-025-01973-1,2025-03-26,12,6.893,12.22,extracted_data/October_2024/10.1101_2024.10.21.619384_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.22.619652_v1,10.1101/2024.10.22.619652,MIIST305 mitigates gastrointestinal acute radiation syndrome injury and ameliorates radiation-induced gut microbiome dysbiosis,v1,2024-10-22,Microbiology,Gut Microbes,10.1080/19490976.2025.2458189,2025-12-31,37,3.609,11.05,extracted_data/October_2024/10.1101_2024.10.22.619652_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.22.619727_v2,10.1101/2024.10.22.619727,Urinary biochemical ecology reveals microbiome-metabolite interactions and metabolic markers of recurrent urinary tract infection,v2,2024-10-22,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-025-00844-1,2025-11-24,61,2.370,8.76,extracted_data/March_2025/10.1101_2024.10.22.619727_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.24.619992_v1,10.1101/2024.10.24.619992,Deterministic colonization arises early during the transition of soil bacteria to the phyllosphere and is shaped by plant-microbe interactions,v1,2024-10-24,Microbiology,Microbiome,10.1186/s40168-025-02090-1,2025-04-22,27,4.117,12.09,extracted_data/October_2024/10.1101_2024.10.24.619992_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.24.620036_v1,10.1101/2024.10.24.620036,TIR signaling activates caspase-like immunity in bacteria,v1,2024-10-24,Microbiology,Science,10.1126/science.adu2262,2025-01-31,6,10.416,15.26,extracted_data/October_2024/10.1101_2024.10.24.620036_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.24.620080_v1,10.1101/2024.10.24.620080,Dynamics of gut colonization by commensal and pathogenic bacteria that adhere to the intestinal epithelium,v1,2024-10-24,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-025-00696-9,2025-05-03,61,2.370,8.76,extracted_data/October_2024/10.1101_2024.10.24.620080_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.24.620115_v1,10.1101/2024.10.24.620115,Emergence and disruption of cooperativity in a denitrifying microbial community,v1,2024-10-24,Microbiology,The ISME Journal,10.1093/ismejo/wraf093,2025-01-02,30,3.973,10.15,extracted_data/October_2024/10.1101_2024.10.24.620115_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.25.620265_v1,10.1101/2024.10.25.620265,Crosstalk between three CRISPR-Cas types enables primed type VI-A adaptation in Listeria seeligeri,v1,2024-10-25,Microbiology,Cell Host & Microbe,10.1016/j.chom.2025.05.020,2025-09,11,7.067,11.68,extracted_data/October_2024/10.1101_2024.10.25.620265_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.26.620100_v2,10.1101/2024.10.26.620100,FRUCTOSE ACTIVATES A STRESS RESPONSE SHARED BY METHYLGLYOXAL AND HYDROGEN PEROXIDE IN STREPTOCOCCUS MUTANS,v2,2024-10-26,Microbiology,mBio,10.1128/mbio.00485-25,2025-05-14,80,1.885,4.35,extracted_data/March_2025/10.1101_2024.10.26.620100_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.28.619893_v1,10.1101/2024.10.28.619893,Structural elements of cyanobacterial co-factor-independent phosphoglycerate mutase that mediate regulation by PirC,v1,2024-10-28,Microbiology,mBio,10.1128/mbio.03378-24,2025-05-14,80,1.885,4.35,extracted_data/October_2024/10.1101_2024.10.28.619893_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.10.28.620739_v2,10.1101/2024.10.28.620739,Temperate phages increase antibiotic effectiveness in a Caenorhabditis elegans infection model,v2,2024-10-28,Microbiology,mBio,10.1128/mbio.01621-25,2025-09-10,80,1.885,4.35,extracted_data/May_2025/10.1101_2024.10.28.620739_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.01.621630_v1,10.1101/2024.11.01.621630,Genome sizes of animal RNA viruses reflect phylogenetic constraints,v1,2024-11-01,Microbiology,Virus Evolution,10.1093/ve/veaf005,2025-02-03,78,1.900,3.75,extracted_data/November_2024/10.1101_2024.11.01.621630_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.03.621721_v1,10.1101/2024.11.03.621721,Methylglyoxal is an antibacterial effector produced by macrophages during infection,v1,2024-11-03,Microbiology,Cell Host & Microbe,10.1016/j.chom.2025.05.026,2025-07,11,7.067,11.68,extracted_data/November_2024/10.1101_2024.11.03.621721_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.05.622059_v1,10.1101/2024.11.05.622059,Distribution of haploid chromosomes into separate nuclei in two pathogenic fungi,v1,2024-11-05,Microbiology,Science,10.1126/science.abn7811,2025-05-15,6,10.416,15.26,extracted_data/November_2024/10.1101_2024.11.05.622059_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.06.622200_v1,10.1101/2024.11.06.622200,The conserved HIV-1 spacer peptide 2 triggers matrix lattice maturation,v1,2024-11-06,Microbiology,Nature,10.1038/s41586-025-08624-9,2025-04-03,2,18.288,18.47,extracted_data/November_2024/10.1101_2024.11.06.622200_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.06.622376_v1,10.1101/2024.11.06.622376,Membrane asymmetry facilitates murine norovirus entry and persistent enteric infection,v1,2024-11-06,Microbiology,PLOS Biology,10.1371/journal.pbio.3003147,2025-04-17,55,2.691,5.46,extracted_data/November_2024/10.1101_2024.11.06.622376_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.07.622457_v1,10.1101/2024.11.07.622457,Epstein-Barr Virus Latent Membrane Protein 1 Subverts IMPDH pathways to drive B-cell oncometabolism,v1,2024-11-07,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013092,2025-05-14,74,1.987,4.73,extracted_data/November_2024/10.1101_2024.11.07.622457_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.10.622811_v1,10.1101/2024.11.10.622811,Cholesterol metabolism and intrabacterial potassium homeostasis are intrinsically related in Mycobacterium tuberculosis,v1,2024-11-10,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013207,2025-05-22,74,1.987,4.73,extracted_data/November_2024/10.1101_2024.11.10.622811_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.10.622831_v3,10.1101/2024.11.10.622831,Oceanic cyanobacterial photosynthesis is negatively affected by viral NblA proteins,v3,2024-11-10,Microbiology,Nature,10.1038/s41586-025-09656-x,2025-12-11,2,18.288,18.47,extracted_data/July_2025/10.1101_2024.11.10.622831_v3.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.11.623010_v1,10.1101/2024.11.11.623010,Evolution of antiviral resistance captures a transient interdomain functional interaction between chikungunya virus envelope glycoproteins,v1,2024-11-11,Microbiology,mBio,10.1128/mbio.02530-25,2025-12-10,80,1.885,4.35,extracted_data/November_2024/10.1101_2024.11.11.623010_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.12.622464_v6,10.1101/2024.11.12.622464,Resource landscape shapes the composition and stability of the human vaginal microbiota,v6,2024-11-12,Microbiology,PLOS Biology,10.1371/journal.pbio.3003575,2026-02-03,55,2.691,5.46,extracted_data/September_2025/10.1101_2024.11.12.622464_v6.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.12.623292_v1,10.1101/2024.11.12.623292,Metaproteomics reveals age-specific alterations of gut microbiome in hamsters with SARS-CoV-2 infection,v1,2024-11-12,Microbiology,Gut Microbes,10.1080/19490976.2025.2505117,2025-12-31,37,3.609,11.05,extracted_data/November_2024/10.1101_2024.11.12.623292_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.13.623364_v2,10.1101/2024.11.13.623364,A Chaperonin Complex Regulates Organelle Proteostasis in Malaria Parasites,v2,2024-11-13,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013275,2025-07-22,74,1.987,4.73,extracted_data/June_2025/10.1101_2024.11.13.623364_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.13.623437_v1,10.1101/2024.11.13.623437,Telomeric transposons are pervasive in linear bacterial genomes,v1,2024-11-13,Microbiology,Science,10.1126/science.adp1973,2025-03-28,6,10.416,15.26,extracted_data/November_2024/10.1101_2024.11.13.623437_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.13.623475_v1,10.1101/2024.11.13.623475,Sugar phosphate-mediated inhibition of peptidoglycan precursor synthesis,v1,2024-11-13,Microbiology,mBio,10.1128/mbio.01729-25,2025-08-13,80,1.885,4.35,extracted_data/November_2024/10.1101_2024.11.13.623475_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.15.623595_v1,10.1101/2024.11.15.623595,Diverse quorum sensing systems regulate microbial communication and biogeochemical processes in deep-sea cold seeps,v1,2024-11-15,Microbiology,Microbiome,10.1186/s40168-025-02280-x,2025-12-03,27,4.117,12.09,extracted_data/November_2024/10.1101_2024.11.15.623595_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.17.624012_v1,10.1101/2024.11.17.624012,Adaptations in gut Bacteroidales facilitate stable co-existence with their lytic bacteriophages,v1,2024-11-17,Microbiology,Gut Microbes,10.1080/19490976.2025.2507775,2025-12-31,37,3.609,11.05,extracted_data/November_2024/10.1101_2024.11.17.624012_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.18.624116_v1,10.1101/2024.11.18.624116,Biofilm lifestyle as a common trait of ammonia-oxidizing archaea,v1,2024-11-18,Microbiology,The ISME Journal,10.1093/ismejo/wraf182,2025-01-02,30,3.973,10.15,extracted_data/November_2024/10.1101_2024.11.18.624116_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.23.624991_v2,10.1101/2024.11.23.624991,Diverse phage defence systems define West African South American pandemic Vibrio cholerae,v2,2024-11-23,Microbiology,Nature Microbiology,10.1038/s41564-025-02004-9,2025-05-22,12,6.893,12.22,extracted_data/January_2025/10.1101_2024.11.23.624991_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.25.625174_v3,10.1101/2024.11.25.625174,HsbA represses stationary phase biofilm formation in Pseudomonas putida,v3,2024-11-25,Microbiology,Microbiological Research,10.1016/j.micres.2025.128428,2026-04,98,1.620,8.01,extracted_data/December_2025/10.1101_2024.11.25.625174_v3.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.25.625199_v1,10.1101/2024.11.25.625199,Structural and Mechanistic Bases for Resistance of the M66I Capsid Variant to Lenacapavir,v1,2024-11-25,Microbiology,mBio,10.1128/mbio.03613-24,2025-05-14,80,1.885,4.35,extracted_data/November_2024/10.1101_2024.11.25.625199_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.26.625535_v1,10.1101/2024.11.26.625535,Identification of the Staphylococcus aureus Endothelial Cell Surface Interactome by Proximity Labeling,v1,2024-11-26,Microbiology,mBio,10.1128/mbio.03654-24,2025-05-14,80,1.885,4.35,extracted_data/November_2024/10.1101_2024.11.26.625535_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.27.625509_v1,10.1101/2024.11.27.625509,The Helicobacter pylori orphan ATTAAT-specific methyltransferase M.Hpy99XIX plays a central role in the coordinated regulation of genes involved in iron metabolism,v1,2024-11-27,Microbiology,mBio,10.1128/mbio.01209-25,2025-07-09,80,1.885,4.35,extracted_data/November_2024/10.1101_2024.11.27.625509_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.29.625931_v1,10.1101/2024.11.29.625931,Flavivirus NS1-triggered endothelial dysfunction promotes virus dissemination,v1,2024-11-29,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013811,2025-12-31,74,1.987,4.73,extracted_data/December_2024/10.1101_2024.11.29.625931_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.11.30.625772_v1,10.1101/2024.11.30.625772,Genome-wide mapping of EBV-induced genomic variations identifies the role of MUC19 in EBV latency,v1,2024-11-30,Microbiology,mBio,10.1128/mbio.02055-25,2025-11-12,80,1.885,4.35,extracted_data/December_2024/10.1101_2024.11.30.625772_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.02.626346_v1,10.1101/2024.12.02.626346,Soil bacterial neutral lipid fatty acids: Markers for carbon storage or necromass?,v1,2024-12-02,Microbiology,Soil Biology and Biochemistry,10.1016/j.soilbio.2025.109855,2025-09,29,3.982,11.87,extracted_data/December_2024/10.1101_2024.12.02.626346_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.04.626866_v2,10.1101/2024.12.04.626866,Evolution in response to prophage activation attenuates the virulence of culturable Serratia symbiotica relatives of aphid endosymbionts,v2,2024-12-04,Microbiology,mBio,10.1128/mbio.02041-25,2025-10-08,80,1.885,4.35,extracted_data/July_2025/10.1101_2024.12.04.626866_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.05.627124_v1,10.1101/2024.12.05.627124,Capture of fusion-intermediate conformations of SARS-CoV-2 spike requires receptor binding and cleavage at either the S1/S2 or S2’ site,v1,2024-12-05,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1012808,2025-04-08,74,1.987,4.73,extracted_data/December_2024/10.1101_2024.12.05.627124_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.06.627244_v1,10.1101/2024.12.06.627244,MCSPACE: inferring microbiome spatiotemporal dynamics from high-throughput co-localization data,v1,2024-12-06,Microbiology,Microbiome,10.1186/s40168-025-02279-4,2025-12-12,27,4.117,12.09,extracted_data/January_2025/10.1101_2024.12.06.627244_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.06.627250_v1,10.1101/2024.12.06.627250,The primary mechanism for highly potent inhibition of HIV-1 maturation by lenacapavir,v1,2024-12-06,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1012862,2025-01-27,74,1.987,4.73,extracted_data/December_2024/10.1101_2024.12.06.627250_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.11.627901_v3,10.1101/2024.12.11.627901,A human gut metagenome-assembled genome catalogue spanning 41 countries supports genome-scale metabolic models,v3,2024-12-11,Microbiology,Nature Microbiology,10.1038/s41564-025-02206-1,2025-12-04,12,6.893,12.22,extracted_data/October_2025/10.1101_2024.12.11.627901_v3.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.12.628106_v1,10.1101/2024.12.12.628106,Maintaining the methionine residues of the chaperone Spy in a reduced state is crucial for periplasmic proteostasis,v1,2024-12-12,Microbiology,PLOS Biology,10.1371/journal.pbio.3003411,2025-09-29,55,2.691,5.46,extracted_data/December_2024/10.1101_2024.12.12.628106_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.12.628214_v1,10.1101/2024.12.12.628214,SARS-CoV-2 Nsp14 binds Tollip and activates pro-inflammatory pathways while downregulating interferon-α and interferon-γ receptors,v1,2024-12-12,Microbiology,mBio,10.1128/mbio.01071-25,2025-08-13,80,1.885,4.35,extracted_data/December_2024/10.1101_2024.12.12.628214_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.17.628953_v1,10.1101/2024.12.17.628953,Outer membrane tube formation by Francisella novicida involves extensive envelope modifications and is linked with type VI secretion and alterations to the host phagosomal membrane,v1,2024-12-17,Microbiology,mBio,10.1128/mbio.01060-25,2025-06-11,80,1.885,4.35,extracted_data/December_2024/10.1101_2024.12.17.628953_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.18.629118_v1,10.1101/2024.12.18.629118,In vitro evolution of caspofungin resistance in Candidozyma auris via FKS1 hotspot I mutations results in moderate fitness trade-offs but no reduction in virulence,v1,2024-12-18,Microbiology,Microbiological Research,10.1016/j.micres.2025.128322,2025-12,98,1.620,8.01,extracted_data/January_2025/10.1101_2024.12.18.629118_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.19.629443_v1,10.1101/2024.12.19.629443,Viro3D: a comprehensive database of virus protein structure predictions,v1,2024-12-19,Microbiology,Molecular Systems Biology,10.1038/s44320-025-00147-9,2025-09-16,21,4.783,7.15,extracted_data/December_2024/10.1101_2024.12.19.629443_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.20.629603_v1,10.1101/2024.12.20.629603,Mobilization of nuclear antiviral factors by Exportin XPO1 via the actin network inhibits RNA virus replication,v1,2024-12-20,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1012841,2025-08-19,74,1.987,4.73,extracted_data/December_2024/10.1101_2024.12.20.629603_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.20.629722_v1,10.1101/2024.12.20.629722,A secreted helminth microRNA suppresses gastrointestinal cell differentiation required for innate immunity,v1,2024-12-20,Microbiology,Frontiers in Immunology,10.3389/fimmu.2025.1558132,2025-03-27,76,1.941,5.69,extracted_data/December_2024/10.1101_2024.12.20.629722_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.23.630103_v1,10.1101/2024.12.23.630103,Expression of Intron-containing HIV-1 RNA Induces NLRP1 Inflammasome Activation in Myeloid Cells,v1,2024-12-23,Microbiology,PLOS Biology,10.1371/journal.pbio.3003320,2025-09-08,55,2.691,5.46,extracted_data/December_2024/10.1101_2024.12.23.630103_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.27.630554_v1,10.1101/2024.12.27.630554,Absolute abundance unveils Basidiobolus as a cross-domain bridge indirectly bolstering gut microbiome homeostasis,v1,2024-12-27,Microbiology,The ISME Journal,10.1093/ismejo/wraf150,2025-01-02,30,3.973,10.15,extracted_data/December_2024/10.1101_2024.12.27.630554_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.30.630810_v1,10.1101/2024.12.30.630810,Fusobacterium nucleatum is enriched in invasive biofilms in colorectal cancer,v1,2024-12-30,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-025-00717-7,2025-05-20,61,2.370,8.76,extracted_data/January_2025/10.1101_2024.12.30.630810_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2024.12.30.630844_v1,10.1101/2024.12.30.630844,The genetic diversity and populational specificity of the human gut virome at single nucleotide resolution,v1,2024-12-30,Microbiology,Microbiome,10.1186/s40168-025-02185-9,2025-08-20,27,4.117,12.09,extracted_data/December_2024/10.1101_2024.12.30.630844_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.02.631159_v1,10.1101/2025.01.02.631159,"The calcineurin pathway regulates extreme thermotolerance, cell membrane and wall integrity, antifungal resistance, and virulence in Candida auris",v1,2025-01-02,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013363,2025-07-28,74,1.987,4.73,extracted_data/January_2025/10.1101_2025.01.02.631159_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.03.631181_v1,10.1101/2025.01.03.631181,Extracellular vesicles from diverse fungal pathogens induce species-specific and endocytosis-dependent immunomodulation,v1,2025-01-03,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1012879,2025-05-30,74,1.987,4.73,extracted_data/January_2025/10.1101_2025.01.03.631181_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.06.628327_v1,10.1101/2025.01.06.628327,Vertical transmission of core endophytes through the seeds,v1,2025-01-06,Microbiology,The ISME Journal,10.1093/ismejo/wraf192,2025-01-02,30,3.973,10.15,extracted_data/January_2025/10.1101_2025.01.06.628327_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.06.631481_v1,10.1101/2025.01.06.631481,Bacteria induce an amoeboid phase in coccolithophores that persists after bloom collapse,v1,2025-01-06,Microbiology,Science Advances,10.1126/sciadv.adw7280,2025-08-29,24,4.324,12.06,extracted_data/January_2025/10.1101_2025.01.06.631481_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.07.631509_v1,10.1101/2025.01.07.631509,Virus and Cell Specific HMGB1 Secretion and Subepithelial Infiltrate Formation in Adenovirus Keratitis,v1,2025-01-07,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013184,2025-05-14,74,1.987,4.73,extracted_data/January_2025/10.1101_2025.01.07.631509_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.07.631744_v1,10.1101/2025.01.07.631744,Isolation of phages infecting the zoonotic pathogen Streptococcus suis reveals novel structural and genomic characteristics,v1,2025-01-07,Microbiology,Microbiological Research,10.1016/j.micres.2025.128147,2025-07,98,1.620,8.01,extracted_data/January_2025/10.1101_2025.01.07.631744_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.09.632101_v1,10.1101/2025.01.09.632101,Dipeptidase 1 is a functional receptor for coronavirus PHEV,v1,2025-01-09,Microbiology,Nature Microbiology,10.1038/s41564-025-02111-7,2025-10-10,12,6.893,12.22,extracted_data/January_2025/10.1101_2025.01.09.632101_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.11.632546_v2,10.1101/2025.01.11.632546,Dynamic interactions of retroviral Gag condensates with nascent viral RNA at transcriptional burst sites: implications for genomic RNA packaging,v2,2025-01-11,Microbiology,mBio,10.1128/mbio.01695-25,2025-09-10,80,1.885,4.35,extracted_data/June_2025/10.1101_2025.01.11.632546_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.14.633035_v1,10.1101/2025.01.14.633035,Microbiota assembly of specific pathogen-free neonatal mice,v1,2025-01-14,Microbiology,Microbiome,10.1186/s40168-025-02043-8,2025-02-07,27,4.117,12.09,extracted_data/January_2025/10.1101_2025.01.14.633035_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.14.633064_v1,10.1101/2025.01.14.633064,Quorum sensing mediates morphology and motility transitions in the model archaeon Haloferax volcanii,v1,2025-01-14,Microbiology,mBio,10.1128/mbio.00906-25,2025-07-09,80,1.885,4.35,extracted_data/January_2025/10.1101_2025.01.14.633064_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.15.633206_v2,10.1101/2025.01.15.633206,Dynamics of Bacterial and Viral Transmission in Experimental Microbiota Transplantation,v2,2025-01-15,Microbiology,The ISME Journal,10.1093/ismejo/wraf256,2025-01-02,30,3.973,10.15,extracted_data/May_2025/10.1101_2025.01.15.633206_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.15.633260_v1,10.1101/2025.01.15.633260,Development of a replication competent murine norovirus reporter system,v1,2025-01-15,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1012834,2025-05-22,74,1.987,4.73,extracted_data/January_2025/10.1101_2025.01.15.633260_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.16.633325_v1,10.1101/2025.01.16.633325,Terminal complement complexes with or without C9 potentiate antimicrobial activity against Neisseria gonorrhoeae,v1,2025-01-16,Microbiology,mBio,10.1128/mbio.00141-25,2025-05-14,80,1.885,4.35,extracted_data/January_2025/10.1101_2025.01.16.633325_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.22.634135_v1,10.1101/2025.01.22.634135,Clonal interference and changing selective pressures shape the escape of SARS-CoV-2 from hundreds of antibodies,v1,2025-01-22,Microbiology,Virus Evolution,10.1093/ve/veaf104,2026-01-19,78,1.900,3.75,extracted_data/January_2025/10.1101_2025.01.22.634135_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.22.634264_v1,10.1101/2025.01.22.634264,Extracellular polymeric substance degradation shapes microbial community diversity,v1,2025-01-22,Microbiology,PLOS Biology,10.1371/journal.pbio.3003287,2025-07-29,55,2.691,5.46,extracted_data/January_2025/10.1101_2025.01.22.634264_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.22.634284_v1,10.1101/2025.01.22.634284,Type I partition-related proteins enhance conjugative transfer through transcriptional activation and oriT region binding,v1,2025-01-22,Microbiology,mBio,10.1128/mbio.01600-25,2025-09-10,80,1.885,4.35,extracted_data/January_2025/10.1101_2025.01.22.634284_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.22.634317_v2,10.1101/2025.01.22.634317,DUX4-stimulated genes define an antiviral defense program in human placental trophoblasts,v2,2025-01-22,Microbiology,Journal of Experimental Medicine,10.1084/jem.20250448,2025-12-01,15,5.834,8.35,extracted_data/July_2025/10.1101_2025.01.22.634317_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.23.634462_v2,10.1101/2025.01.23.634462,"The essential role of 2,4-dienoyl-CoA reductase for degradation of complex fatty acid mixtures",v2,2025-01-23,Microbiology,mBio,10.1128/mbio.02203-25,2025-12-10,80,1.885,4.35,extracted_data/March_2025/10.1101_2025.01.23.634462_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.24.634720_v1,10.1101/2025.01.24.634720,A ubiquitin-like protein controls assembly of a bacterial Type VIIb secretion system,v1,2025-01-24,Microbiology,Science Advances,10.1126/sciadv.ady9587,2025-11-21,24,4.324,12.06,extracted_data/January_2025/10.1101_2025.01.24.634720_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.25.634704_v1,10.1101/2025.01.25.634704,A pan-respiratory virus attachment inhibitor with high potency in human airway models and in vivo,v1,2025-01-25,Microbiology,Science Advances,10.1126/sciadv.adv9311,2025-08,24,4.324,12.06,extracted_data/January_2025/10.1101_2025.01.25.634704_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.25.634871_v1,10.1101/2025.01.25.634871,Staphylococcus haemolyticus is a reservoir of antibiotic resistance genes in the preterm infant gut,v1,2025-01-25,Microbiology,Gut Microbes,10.1080/19490976.2025.2519700,2025-12-31,37,3.609,11.05,extracted_data/January_2025/10.1101_2025.01.25.634871_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.27.635102_v1,10.1101/2025.01.27.635102,Bacteriophage-driven DNA inversions shape bacterial functionality and long-term co-existence in Bacteroides fragilis,v1,2025-01-27,Microbiology,Gut Microbes,10.1080/19490976.2025.2501492,2025-12-31,37,3.609,11.05,extracted_data/January_2025/10.1101_2025.01.27.635102_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.28.635403_v1,10.1101/2025.01.28.635403,Molecular mechanisms of plastic biodegradation by the fungus Clonostachys rosea,v1,2025-01-28,Microbiology,mBio,10.1128/mbio.00335-25,2025-08-13,80,1.885,4.35,extracted_data/January_2025/10.1101_2025.01.28.635403_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.29.635557_v1,10.1101/2025.01.29.635557,Capturing dynamic phage-pathogen coevolution by clinical surveillance,v1,2025-01-29,Microbiology,Nature,10.1038/s41586-026-10136-z,2026-03-11,2,18.288,18.47,extracted_data/January_2025/10.1101_2025.01.29.635557_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.31.635836_v3,10.1101/2025.01.31.635836,Critical Assessment of MetaProteome Investigation 2 (CAMPI-2): Multi-laboratory assessment of sample processing methods to stabilize fecal microbiome for functional analysis,v3,2025-01-31,Microbiology,Microbiome,10.1186/s40168-025-02248-x,2025-11-27,27,4.117,12.09,extracted_data/July_2025/10.1101_2025.01.31.635836_v3.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.01.31.635867_v1,10.1101/2025.01.31.635867,Adaptive strategies of Caribbean sponge holobionts beyond the mesophotic zone,v1,2025-01-31,Microbiology,Microbiome,10.1186/s40168-025-02146-2,2025-07-02,27,4.117,12.09,extracted_data/February_2025/10.1101_2025.01.31.635867_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.04.636569_v1,10.1101/2025.02.04.636569,DAZAP2 functions as a pan-coronavirus restriction factor by inhibiting viral entry and genomic replication,v1,2025-02-04,Microbiology,mBio,10.1128/mbio.00385-25,2025-09-10,80,1.885,4.35,extracted_data/February_2025/10.1101_2025.02.04.636569_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.10.637388_v1,10.1101/2025.02.10.637388,High-Fidelity Long-Read Sequencing of an Avian Herpesvirus Reveals Extensive Intrapopulation Diversity in Tandem Repeat Regions,v1,2025-02-10,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013435,2025-08-25,74,1.987,4.73,extracted_data/February_2025/10.1101_2025.02.10.637388_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.10.637581_v2,10.1101/2025.02.10.637581,ABCF Protein-Mediated Resistance Shapes Bacterial Responses to antibiotics Based on their Type and Concentration,v2,2025-02-10,Microbiology,mBio,10.1128/mbio.01568-25,2025-09-10,80,1.885,4.35,extracted_data/February_2025/10.1101_2025.02.10.637581_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.12.637808_v1,10.1101/2025.02.12.637808,An antisense oligomer conjugate with unpredicted bactericidal activity against Fusobacterium nucleatum,v1,2025-02-12,Microbiology,mBio,10.1128/mbio.00524-25,2025-06-11,80,1.885,4.35,extracted_data/February_2025/10.1101_2025.02.12.637808_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.12.637867_v1,10.1101/2025.02.12.637867,Degradation of ribosomal RNA during Plasmodium falciparum gametocytogenesis,v1,2025-02-12,Microbiology,mBio,10.1128/mbio.02565-25,2025-11-12,80,1.885,4.35,extracted_data/February_2025/10.1101_2025.02.12.637867_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.13.638029_v1,10.1101/2025.02.13.638029,Staphylococcal Internalization into Osteoblasts: A Partially Conserved Mechanism Across the Genus,v1,2025-02-13,Microbiology,mBio,10.1128/mbio.01697-25,2026-01-14,80,1.885,4.35,extracted_data/February_2025/10.1101_2025.02.13.638029_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.14.638235_v1,10.1101/2025.02.14.638235,The Pseudomonas aeruginosa Tse4 toxin assembles ion-selective and voltage-sensitive ion channels to couple membrane depolarisation with K+ efflux,v1,2025-02-14,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1012981,2025-06-04,74,1.987,4.73,extracted_data/February_2025/10.1101_2025.02.14.638235_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.16.638538_v1,10.1101/2025.02.16.638538,Diverse Viral Pathogens in Australian Canines: Limited Geographic Structure and the First Detection of an RNA Virus in Dingoes,v1,2025-02-16,Microbiology,Virus Evolution,10.1093/ve/veaf042,2025-01-09,78,1.900,3.75,extracted_data/February_2025/10.1101_2025.02.16.638538_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.19.639047_v2,10.1101/2025.02.19.639047,Prevalence and mechanisms of high-level carbapenem antibiotic tolerance in clinical isolates of Klebsiella pneumoniae,v2,2025-02-19,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013919,2026-01-30,74,1.987,4.73,extracted_data/November_2025/10.1101_2025.02.19.639047_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.23.639760_v1,10.1101/2025.02.23.639760,Linear dicentric chromosomes in bacterial natural isolates reveal common constraints for replicon fusion,v1,2025-02-23,Microbiology,mBio,10.1128/mbio.01046-25,2025-06-11,80,1.885,4.35,extracted_data/February_2025/10.1101_2025.02.23.639760_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.26.640152_v1,10.1101/2025.02.26.640152,Pseudomonads coordinate innate defense against viruses and bacteria with a single regulatory system,v1,2025-02-26,Microbiology,Cell Host & Microbe,10.1016/j.chom.2025.07.016,2025-08,11,7.067,11.68,extracted_data/February_2025/10.1101_2025.02.26.640152_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.26.640445_v1,10.1101/2025.02.26.640445,Risk-reward trade-off in motility endurance generates dichotomy in search strategies among copiotrophic marine bacteria,v1,2025-02-26,Microbiology,Nature Microbiology,10.1038/s41564-025-01997-7,2025-05-26,12,6.893,12.22,extracted_data/February_2025/10.1101_2025.02.26.640445_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.28.640651_v1,10.1101/2025.02.28.640651,Metagenomic selections reveal diverse antiphage defenses in human and environmental microbiomes,v1,2025-02-28,Microbiology,Cell Host & Microbe,10.1016/j.chom.2025.07.005,2025-08,11,7.067,11.68,extracted_data/March_2025/10.1101_2025.02.28.640651_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.02.28.640801_v1,10.1101/2025.02.28.640801,Evolution guided tolerance engineering of Pseudomonas putida KT2440 for production of the sustainable aviation fuel precursor isoprenol,v1,2025-02-28,Microbiology,Metabolic Engineering,10.1016/j.ymben.2025.05.007,2025-09,87,1.771,7.37,extracted_data/March_2025/10.1101_2025.02.28.640801_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.03.641131_v1,10.1101/2025.03.03.641131,Strain-specific galactose utilization by commensal E. coli mitigates Salmonella establishment in the gut,v1,2025-03-03,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013232,2025-06-27,74,1.987,4.73,extracted_data/March_2025/10.1101_2025.03.03.641131_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.04.641414_v2,10.1101/2025.03.04.641414,Pathogenicity and transmissibility of bovine-derived HPAI H5N1 B3.13 virus in pigs,v2,2025-03-04,Microbiology,Emerging Microbes & Infections,10.1080/22221751.2025.2509742,2025-12-31,69,2.264,7.12,extracted_data/March_2025/10.1101_2025.03.04.641414_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.04.641579_v1,10.1101/2025.03.04.641579,Behavioral Manipulation of Ixodes scapularis by Ehrlichia muris eauclairensis: Implications for Tick-Borne Disease Transmission,v1,2025-03-04,Microbiology,mBio,10.1128/mbio.00758-25,2025-07-09,80,1.885,4.35,extracted_data/March_2025/10.1101_2025.03.04.641579_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.06.641941_v1,10.1101/2025.03.06.641941,Environmental drivers of the resistome across the Baltic Sea,v1,2025-03-06,Microbiology,Microbiome,10.1186/s40168-025-02086-x,2025-04-07,27,4.117,12.09,extracted_data/March_2025/10.1101_2025.03.06.641941_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.07.642065_v2,10.1101/2025.03.07.642065,Inhibitors of trehalose-6-phosphate synthase activity in fungal pathogens compromise thermal tolerance pathways,v2,2025-03-07,Microbiology,mBio,10.1128/mbio.01795-25,2025-10-08,80,1.885,4.35,extracted_data/June_2025/10.1101_2025.03.07.642065_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.10.642329_v2,10.1101/2025.03.10.642329,A high-quality genomic catalog of the human oral microbiome broadens its phylogeny and clinical insights,v2,2025-03-10,Microbiology,Cell Host & Microbe,10.1016/j.chom.2025.10.001,2025-11,11,7.067,11.68,extracted_data/April_2025/10.1101_2025.03.10.642329_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.10.642427_v1,10.1101/2025.03.10.642427,Rho2 regulates granulocyte-triggered stress adaptation and cell wall remodeling in Aspergillus fumigatus,v1,2025-03-10,Microbiology,Microbiological Research,10.1016/j.micres.2025.128238,2025-10,98,1.620,8.01,extracted_data/March_2025/10.1101_2025.03.10.642427_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.10.642448_v1,10.1101/2025.03.10.642448,Lipopolysaccharide lateral mobility in the Gram-negative bacterial outer membrane is confined and governed by interactions within the conserved Lipid A anchor,v1,2025-03-10,Microbiology,The EMBO Journal,10.1038/s44318-026-00711-5,2026-02-17,20,4.821,7.14,extracted_data/March_2025/10.1101_2025.03.10.642448_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.12.642769_v2,10.1101/2025.03.12.642769,Persistent viral infections impact key biological traits in Drosophila melanogaster,v2,2025-03-12,Microbiology,PLOS Biology,10.1371/journal.pbio.3003437,2025-10-09,55,2.691,5.46,extracted_data/September_2025/10.1101_2025.03.12.642769_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.18.644043_v1,10.1101/2025.03.18.644043,Tracking Replicating HPV Genomes in Proliferating Keratinocytes,v1,2025-03-18,Microbiology,mBio,10.1128/mbio.01308-25,2025-08-13,80,1.885,4.35,extracted_data/March_2025/10.1101_2025.03.18.644043_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.21.641387_v2,10.1101/2025.03.21.641387,Profound taxonomic and functional gut microbiota alterations associated with trichuriasis: cross-country and country-specific patterns,v2,2025-03-21,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-026-00911-1,2026-01-21,61,2.370,8.76,extracted_data/March_2025/10.1101_2025.03.21.641387_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.22.644702_v3,10.1101/2025.03.22.644702,A split ALFA tag-nanobody system for protein localization and proximity proteomics in mycobacteria,v3,2025-03-22,Microbiology,mBio,10.1128/mbio.00971-25,2025-08-13,80,1.885,4.35,extracted_data/March_2025/10.1101_2025.03.22.644702_v3.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.24.644982_v1,10.1101/2025.03.24.644982,Adaptive pangenomic remodeling in the Azolla cyanobiont amid a transient microbiome,v1,2025-03-24,Microbiology,The ISME Journal,10.1093/ismejo/wraf154,2025-01-02,30,3.973,10.15,extracted_data/March_2025/10.1101_2025.03.24.644982_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.26.645422_v1,10.1101/2025.03.26.645422,Pre-assembly of biomolecular condensate seeds drives RSV replication,v1,2025-03-26,Microbiology,Nature,10.1038/s41586-025-10071-5,2026-04-02,2,18.288,18.47,extracted_data/March_2025/10.1101_2025.03.26.645422_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.31.646272_v1,10.1101/2025.03.31.646272,Ex vivo HIV DNA integration in STAT3 drives T cell persistence—A model of HIV-associated T cell lymphoma,v1,2025-03-31,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013087,2025-07-08,74,1.987,4.73,extracted_data/April_2025/10.1101_2025.03.31.646272_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.03.31.646387_v1,10.1101/2025.03.31.646387,Methane sink function of grassland soil microbiomes - negative effects of intensive management persist three years after land-use extensification,v1,2025-03-31,Microbiology,Soil Biology and Biochemistry,10.1016/j.soilbio.2025.109981,2025-12,29,3.982,11.87,extracted_data/April_2025/10.1101_2025.03.31.646387_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.02.646699_v2,10.1101/2025.04.02.646699,"Effect of Azithromycin treatment on the microbial composition, functional dynamics and resistomes of endocervical, vaginal and rectal microbiomes of women in Fiji with Chlamydia trachomatis infection",v2,2025-04-02,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-025-00858-9,2025-12-13,61,2.370,8.76,extracted_data/April_2025/10.1101_2025.04.02.646699_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.03.647037_v1,10.1101/2025.04.03.647037,Inactivation of the Fusobacterium nucleatum Rnf complex reduces FadA-mediated amyloid formation and tumor development,v1,2025-04-03,Microbiology,mBio,10.1128/mbio.01032-25,2025-06-11,80,1.885,4.35,extracted_data/April_2025/10.1101_2025.04.03.647037_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.04.647291_v1,10.1101/2025.04.04.647291,Superinfection with intact HIV-1 results in conditional replication of defective proviruses and nonsuppressible viremia in people living with HIV-1,v1,2025-04-04,Microbiology,Nature Microbiology,10.1038/s41564-025-02135-z,2025-10-03,12,6.893,12.22,extracted_data/April_2025/10.1101_2025.04.04.647291_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.06.647259_v1,10.1101/2025.04.06.647259,Deazaguanylation is a nucleobase-protein conjugation required for type IV CBASS immunity,v1,2025-04-06,Microbiology,Science,10.1126/science.adx6053,2025-09-25,6,10.416,15.26,extracted_data/April_2025/10.1101_2025.04.06.647259_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.10.648298_v1,10.1101/2025.04.10.648298,"Amplicon sequencing detects, identifies, and quantifies minority variants in mixed-species infections of Cryptosporidium parasites",v1,2025-04-10,Microbiology,mBio,10.1128/mbio.01109-25,2025-10-08,80,1.885,4.35,extracted_data/April_2025/10.1101_2025.04.10.648298_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.16.649068_v1,10.1101/2025.04.16.649068,The Salmonella phage shock protein system is required for defense against host antimicrobial peptides,v1,2025-04-16,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013132,2025-09-09,74,1.987,4.73,extracted_data/April_2025/10.1101_2025.04.16.649068_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.16.649159_v1,10.1101/2025.04.16.649159,Disruption of putrescine export in experimentally evolved Ralstonia pseudosolanacearum enhances symbiosis with Mimosa pudica,v1,2025-04-16,Microbiology,mBio,10.1128/mbio.01225-25,2026-01-14,80,1.885,4.35,extracted_data/April_2025/10.1101_2025.04.16.649159_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.17.649288_v3,10.1101/2025.04.17.649288,Polar localization of putative phospholipid transporters in Escherichia coli,v3,2025-04-17,Microbiology,mBio,10.1128/mbio.03481-25,2026-03-11,80,1.885,4.35,extracted_data/November_2025/10.1101_2025.04.17.649288_v3.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.21.649776_v1,10.1101/2025.04.21.649776,Impact of the RaS-RiPP tryglysin and culturing conditions on ex-vivo oral microbiomes,v1,2025-04-21,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-025-00794-8,2025-08-04,61,2.370,8.76,extracted_data/April_2025/10.1101_2025.04.21.649776_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.21.649805_v1,10.1101/2025.04.21.649805,Nucleoid Compaction Influences Carboxysome Localization and Dynamics in Synechococcus elongatus PCC 7942,v1,2025-04-21,Microbiology,mBio,10.1128/mbio.01919-25,2025-10-08,80,1.885,4.35,extracted_data/April_2025/10.1101_2025.04.21.649805_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.23.650235_v1,10.1101/2025.04.23.650235,Function-Based Selection of Synthetic Communities Enables Mechanistic Microbiome Studies,v1,2025-04-23,Microbiology,The ISME Journal,10.1093/ismejo/wraf209,2025-01-02,30,3.973,10.15,extracted_data/April_2025/10.1101_2025.04.23.650235_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.23.650345_v1,10.1101/2025.04.23.650345,A refined low-dose murine model of Mycobacterium ulcerans infection to assess integrated immune networks in Buruli ulcer pathogenesis,v1,2025-04-23,Microbiology,mBio,10.1128/mbio.01931-25,2025-09-10,80,1.885,4.35,extracted_data/April_2025/10.1101_2025.04.23.650345_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.24.650524_v1,10.1101/2025.04.24.650524,"Gut bacteria degrade purines via the 2,8-dioxopurine pathway",v1,2025-04-24,Microbiology,Nature Microbiology,10.1038/s41564-025-02079-4,2025-08-06,12,6.893,12.22,extracted_data/April_2025/10.1101_2025.04.24.650524_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.28.651050_v1,10.1101/2025.04.28.651050,Mapping a Toxoplasma gondii interactome by crosslinking mass spectrometry and machine learning,v1,2025-04-28,Microbiology,mBio,10.1128/mbio.02159-25,2025-10-08,80,1.885,4.35,extracted_data/April_2025/10.1101_2025.04.28.651050_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.04.30.651551_v1,10.1101/2025.04.30.651551,Anoxia activates CRISPR-Cas immunity in the intestine,v1,2025-04-30,Microbiology,Nature Microbiology,10.1038/s41564-025-02172-8,2025-10-29,12,6.893,12.22,extracted_data/May_2025/10.1101_2025.04.30.651551_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.05.04.652149_v2,10.1101/2025.05.04.652149,"Grapevine phyllosphere pan-metagenomics reveals pan-microbiome structure, diversity, and functional roles in downy mildew resistance",v2,2025-05-04,Microbiology,Microbiome,10.1186/s40168-025-02287-4,2025-12-01,27,4.117,12.09,extracted_data/September_2025/10.1101_2025.05.04.652149_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.05.04.652153_v1,10.1101/2025.05.04.652153,Coordinated regulation of Mdr1- and Cdr1-mediated protection from antifungals by the Mrr1 transcription factor in emerging Candida spp,v1,2025-05-04,Microbiology,mBio,10.1128/mbio.01323-25,2025-11-12,80,1.885,4.35,extracted_data/May_2025/10.1101_2025.05.04.652153_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.05.06.652565_v2,10.1101/2025.05.06.652565,Lantibiotic-producing bacteria impact microbiome resilience and colonization resistance,v2,2025-05-06,Microbiology,Cell Host & Microbe,10.1016/j.chom.2025.11.007,2025-12,11,7.067,11.68,extracted_data/May_2025/10.1101_2025.05.06.652565_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.05.08.652984_v1,10.1101/2025.05.08.652984,Endophilin mediated endocytosis and Epidermal growth factor receptor govern Japanese encephalitis virus entry and infection in neuronal cells,v1,2025-05-08,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013790,2025-12-16,74,1.987,4.73,extracted_data/May_2025/10.1101_2025.05.08.652984_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.05.12.653529_v1,10.1101/2025.05.12.653529,Randomized field trial of a therapeutic vaccine against Trypanosoma cruzi natural infection in dogs and correlates for efficacy,v1,2025-05-12,Microbiology,npj Vaccines,10.1038/s41541-025-01338-z,2025-12-18,71,2.236,6.09,extracted_data/May_2025/10.1101_2025.05.12.653529_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.05.13.653012_v1,10.1101/2025.05.13.653012,LicD-Mediated Cell Wall Decoration Governs Phage Sensitivity in Enterococcus faecalis Clinical Isolates,v1,2025-05-13,Microbiology,Microbiological Research,10.1016/j.micres.2025.128341,2026-01,98,1.620,8.01,extracted_data/May_2025/10.1101_2025.05.13.653012_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.05.14.654034_v1,10.1101/2025.05.14.654034,Cyclic di-AMP inhibits Listeria monocytogenes thymineless death during infection,v1,2025-05-14,Microbiology,mBio,10.1128/mbio.03351-25,2026-01-14,80,1.885,4.35,extracted_data/May_2025/10.1101_2025.05.14.654034_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.05.15.654217_v1,10.1101/2025.05.15.654217,Interplay between SpaO variants shapes the architecture of the Salmonella type III secretion sorting platform,v1,2025-05-15,Microbiology,mBio,10.1128/mbio.00155-26,2026-04-08,80,1.885,4.35,extracted_data/May_2025/10.1101_2025.05.15.654217_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.05.16.654538_v1,10.1101/2025.05.16.654538,"Prolonged non-suppressible viremia sustained by a clonally expanded, genomically defective provirus with an immune-evasive HIV protein expression profile",v1,2025-05-16,Microbiology,mBio,10.1128/mbio.03909-25,2026-03-30,80,1.885,4.35,extracted_data/May_2025/10.1101_2025.05.16.654538_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.05.21.655433_v1,10.1101/2025.05.21.655433,Inhibitory activities of monoclonal antibodies against Staphylococcus aureus Clumping factor A,v1,2025-05-21,Microbiology,mBio,10.1128/mbio.02197-25,2025-10-08,80,1.885,4.35,extracted_data/May_2025/10.1101_2025.05.21.655433_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.06.658250_v1,10.1101/2025.06.06.658250,The HIV-1 envelope cytoplasmic tail protects infected cells from ADCC by downregulating CD4,v1,2025-06-06,Microbiology,mBio,10.1128/mbio.01763-25,2025-10-08,80,1.885,4.35,extracted_data/June_2025/10.1101_2025.06.06.658250_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.11.659228_v2,10.1101/2025.06.11.659228,"RprR is a plant-responsive regulator of exopolysaccharide production, biofilm formation, and virulence in Ralstonia pseudosolanacearum",v2,2025-06-11,Microbiology,mBio,10.1128/mbio.02912-25,2026-01-14,80,1.885,4.35,extracted_data/September_2025/10.1101_2025.06.11.659228_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.15.659773_v1,10.1101/2025.06.15.659773,Phage-Encoded TelN Inhibits Mre11-Rad50 to Protect Hairpin Telomeres,v1,2025-06-15,Microbiology,The EMBO Journal,10.1038/s44318-025-00593-z,2025-10-15,20,4.821,7.14,extracted_data/June_2025/10.1101_2025.06.15.659773_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.17.660209_v1,10.1101/2025.06.17.660209,Bacteria deliver a microtubule-binding protein into mammalian cells to promote colonization,v1,2025-06-17,Microbiology,Science,10.1126/science.adz2737,2026-02-19,6,10.416,15.26,extracted_data/June_2025/10.1101_2025.06.17.660209_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.18.660398_v1,10.1101/2025.06.18.660398,Host- and microbial-mediated mucin degradation differentially shape Pseudomonas aeruginosa physiology and gene expression,v1,2025-06-18,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013568,2025-10-03,74,1.987,4.73,extracted_data/June_2025/10.1101_2025.06.18.660398_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.19.660376_v1,10.1101/2025.06.19.660376,A new role for lipoproteins LpqZ and FecB in orchestrating mycobacterial cell envelope biogenesis,v1,2025-06-19,Microbiology,mBio,10.1128/mbio.02119-25,2026-01-14,80,1.885,4.35,extracted_data/June_2025/10.1101_2025.06.19.660376_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.20.660667_v1,10.1101/2025.06.20.660667,Pp6-Pfkfb1 axis modulates intracellular bacterial proliferation by orchestrating host-pathogen metabolic crosstalk,v1,2025-06-20,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013304,2025-12-31,74,1.987,4.73,extracted_data/June_2025/10.1101_2025.06.20.660667_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.23.660806_v1,10.1101/2025.06.23.660806,A type III secretion system is required for Bordetella atropi invasion of host cells in vivo,v1,2025-06-23,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013949,2026-02-13,74,1.987,4.73,extracted_data/June_2025/10.1101_2025.06.23.660806_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.23.660901_v1,10.1101/2025.06.23.660901,Metabolite Interactions Mediate Beneficial Alliances Between Bacillus and Trichoderma for Effective Fusarium Wilt Control,v1,2025-06-23,Microbiology,The ISME Journal,10.1093/ismejo/wraf283,2026-01-14,30,3.973,10.15,extracted_data/June_2025/10.1101_2025.06.23.660901_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.25.661132_v3,10.1101/2025.06.25.661132,"Cultivation of Methanonezhaarchaeia, the third class of methanogens within the phylum Thermoproteota",v3,2025-06-25,Microbiology,Science Advances,10.1126/sciadv.aea0936,2025-12-12,24,4.324,12.06,extracted_data/October_2025/10.1101_2025.06.25.661132_v3.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.25.661606_v3,10.1101/2025.06.25.661606,Cell cycle dysregulation of globally important SAR11 bacteria resulting from environmental perturbation,v3,2025-06-25,Microbiology,Nature Microbiology,10.1038/s41564-025-02237-8,2026-01-22,12,6.893,12.22,extracted_data/November_2025/10.1101_2025.06.25.661606_v3.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.26.661555_v1,10.1101/2025.06.26.661555,Microbiome-Dependent Functional Responses to Structurally Distinct Oligosaccharides Revealed by Metaproteomics,v1,2025-06-26,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-025-00881-w,2025-12-09,61,2.370,8.76,extracted_data/July_2025/10.1101_2025.06.26.661555_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.06.27.661969_v1,10.1101/2025.06.27.661969,"Detection of clade 2.3.4.4b H5N1 high pathogenicity avian influenza virus in a sheep in Great Britain, 2025",v1,2025-06-27,Microbiology,Emerging Microbes & Infections,10.1080/22221751.2025.2547730,2025-12-31,69,2.264,7.12,extracted_data/June_2025/10.1101_2025.06.27.661969_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.04.663240_v1,10.1101/2025.07.04.663240,The cryo-EM structure of an adaptor-effector complex reveals the mechanism of a widespread pore-forming toxin family,v1,2025-07-04,Microbiology,The EMBO Journal,10.1038/s44318-025-00689-6,2026-01-12,20,4.821,7.14,extracted_data/July_2025/10.1101_2025.07.04.663240_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.08.663646_v1,10.1101/2025.07.08.663646,Staphylococcus aureus exhibits spatiotemporal heterogeneity in Sae activity during kidney abscess development,v1,2025-07-08,Microbiology,mBio,10.1128/mbio.02043-25,2025-12-10,80,1.885,4.35,extracted_data/July_2025/10.1101_2025.07.08.663646_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.10.664130_v2,10.1101/2025.07.10.664130,Dicer accumulates in cytoplasmic foci upon alphavirus infection and plays a proviral role in Myotis myotis bat cells,v2,2025-07-10,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013815,2025-12-22,74,1.987,4.73,extracted_data/August_2025/10.1101_2025.07.10.664130_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.14.664771_v1,10.1101/2025.07.14.664771,Conformations and sequence determinants in the lipid binding of an adhesive peptide derived from Vibrio cholerae biofilm,v1,2025-07-14,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013990,2026-02-19,74,1.987,4.73,extracted_data/July_2025/10.1101_2025.07.14.664771_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.15.663935_v1,10.1101/2025.07.15.663935,The dengue virus NS1 protein alters Aedes aegypti midgut permeability and favors virus dissemination,v1,2025-07-15,Microbiology,mBio,10.1128/mbio.03173-25,2026-02-11,80,1.885,4.35,extracted_data/July_2025/10.1101_2025.07.15.663935_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.21.665852_v1,10.1101/2025.07.21.665852,"Wbm0152, an outer membrane lipoprotein of the Wolbachia endosymbiont of Brugia malayi, inhibits yeast ESCRT complex activity",v1,2025-07-21,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013383,2025-12-11,74,1.987,4.73,extracted_data/July_2025/10.1101_2025.07.21.665852_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.23.666297_v2,10.1101/2025.07.23.666297,Comparative analysis of shared and unique mechanisms important for diverse strains of Pasteurella multocida to cause systemic infection in mice,v2,2025-07-23,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013398,2025-12-22,74,1.987,4.73,extracted_data/July_2025/10.1101_2025.07.23.666297_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.25.665838_v1,10.1101/2025.07.25.665838,Disruption of IgA-mediated aggregation at weaning favors mucus encroachment by commensal bacteria,v1,2025-07-25,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-026-00946-4,2026-03-03,61,2.370,8.76,extracted_data/July_2025/10.1101_2025.07.25.665838_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.28.667249_v1,10.1101/2025.07.28.667249,Recurrent acquisition of nuclease-protease pairs in antiviral immunity,v1,2025-07-28,Microbiology,Science,10.1126/science.aea8769,2026-01-08,6,10.416,15.26,extracted_data/July_2025/10.1101_2025.07.28.667249_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.30.667625_v1,10.1101/2025.07.30.667625,A family of linear plasmid phages that detect a quorum-sensing autoinducer exists in multiple bacterial species,v1,2025-07-30,Microbiology,mBio,10.1128/mbio.02320-25,2026-01-14,80,1.885,4.35,extracted_data/July_2025/10.1101_2025.07.30.667625_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.07.31.663499_v1,10.1101/2025.07.31.663499,Kinetic Plasticity of Nitrite-Oxidizing Bacteria Containing Cytoplasmic Nitrite Oxidoreductase,v1,2025-07-31,Microbiology,The ISME Journal,10.1093/ismejo/wrag040,2026-01-14,30,3.973,10.15,extracted_data/August_2025/10.1101_2025.07.31.663499_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.08.04.668531_v1,10.1101/2025.08.04.668531,Benefits and costs of a hypercapsule and the mechanism of its loss in a clinical isolate of Acinetobacter baumannii,v1,2025-08-04,Microbiology,mBio,10.1128/mbio.02366-25,2026-02-11,80,1.885,4.35,extracted_data/August_2025/10.1101_2025.08.04.668531_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.08.05.668391_v1,10.1101/2025.08.05.668391,Viral Diversity Influences T Cell Responses to Enteric Human Adenoviruses F40 and F41,v1,2025-08-05,Microbiology,Virus Evolution,10.1093/ve/veaf098,2026-01-19,78,1.900,3.75,extracted_data/August_2025/10.1101_2025.08.05.668391_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.08.06.666330_v1,10.1101/2025.08.06.666330,Mechanistic Insights into Dual-Active Liver and Blood-Stage Antiplasmodials,v1,2025-08-06,Microbiology,mBio,10.1128/mbio.02423-25,2026-01-14,80,1.885,4.35,extracted_data/August_2025/10.1101_2025.08.06.666330_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.08.06.668933_v1,10.1101/2025.08.06.668933,The presence and induction of regioselective dehydroxylases dictate urolithin metabolism by Enterocloster species,v1,2025-08-06,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-025-00849-w,2025-11-26,61,2.370,8.76,extracted_data/August_2025/10.1101_2025.08.06.668933_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.08.08.669280_v1,10.1101/2025.08.08.669280,Molecular response to the non-lytic peptide bac7 (1-35) triggers disruption of Klebsiella pneumoniae biofilm,v1,2025-08-08,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013437,2025-12-01,74,1.987,4.73,extracted_data/August_2025/10.1101_2025.08.08.669280_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.08.11.669294_v2,10.1101/2025.08.11.669294,Thermophilic bacteria employ a contractile injection system in hot spring microbial mats,v2,2025-08-11,Microbiology,The ISME Journal,10.1093/ismejo/wrag021,2026-01-14,30,3.973,10.15,extracted_data/September_2025/10.1101_2025.08.11.669294_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.08.15.670500_v1,10.1101/2025.08.15.670500,Shipped and shifted: modeling collection-induced bias in microbiome multi-omics using a tractable fermentation system,v1,2025-08-15,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-025-00909-1,2026-01-09,61,2.370,8.76,extracted_data/August_2025/10.1101_2025.08.15.670500_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.08.20.671228_v1,10.1101/2025.08.20.671228,Phase variation of Clostridioides difficile colony morphology occurs via modulation of cell division,v1,2025-08-20,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1013471,2025-12-01,74,1.987,4.73,extracted_data/August_2025/10.1101_2025.08.20.671228_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.08.27.672358_v1,10.1101/2025.08.27.672358,Integrative multi-omics analysis of dietary fibre-induced modulations in the composition and function of chicken caecal microbiota,v1,2025-08-27,Microbiology,npj Biofilms and Microbiomes,10.1038/s41522-026-00943-7,2026-02-25,61,2.370,8.76,extracted_data/August_2025/10.1101_2025.08.27.672358_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.09.05.674520_v1,10.1101/2025.09.05.674520,Chromatin assembly by the histone chaperone HIRA facilitates Human Papillomavirus replication,v1,2025-09-05,Microbiology,Tumour Virus Research,10.1016/j.tvr.2025.200329,2025-12,79,1.889,8.29,extracted_data/September_2025/10.1101_2025.09.05.674520_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.09.09.675038_v1,10.1101/2025.09.09.675038,SERINC5 co-expressed with HIV-1 Env or present in a target membrane destabilizes small fusion pores leading to their collapse,v1,2025-09-09,Microbiology,mBio,10.1128/mbio.02793-25,2025-12-10,80,1.885,4.35,extracted_data/September_2025/10.1101_2025.09.09.675038_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.09.10.675493_v1,10.1101/2025.09.10.675493,Acute malaria dysregulates specialized lymph node macrophages to suppress vaccine-elicited protection against Ebola virus,v1,2025-09-10,Microbiology,mBio,10.1128/mbio.02796-25,2026-02-11,80,1.885,4.35,extracted_data/September_2025/10.1101_2025.09.10.675493_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.09.11.675340_v1,10.1101/2025.09.11.675340,An Inducible CRISPRi system for phenotypic analysis of essential genes in Pseudomonas aeruginosa,v1,2025-09-11,Microbiology,mBio,10.1128/mbio.02767-25,2026-03-11,80,1.885,4.35,extracted_data/September_2025/10.1101_2025.09.11.675340_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.09.11.675558_v1,10.1101/2025.09.11.675558,Functional characterization of a Con7-related transcription factor in Coprinopsis cinerea indicates evolutionary conservation of morphogenetic roles,v1,2025-09-11,Microbiology,Microbiological Research,10.1016/j.micres.2026.128462,2026-05,98,1.620,8.01,extracted_data/September_2025/10.1101_2025.09.11.675558_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.09.22.675545_v2,10.1101/2025.09.22.675545,Microbial degradation of a widely used model polyethylene is restricted to medium- and long-chain alkanes and their oxidized derivatives,v2,2025-09-22,Microbiology,The ISME Journal,10.1093/ismejo/wraf276,2025-01-02,30,3.973,10.15,extracted_data/October_2025/10.1101_2025.09.22.675545_v2.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.09.23.677255_v1,10.1101/2025.09.23.677255,Resilient Antarctic soil bacteria consume trace gases across wide temperature ranges,v1,2025-09-23,Microbiology,The ISME Journal,10.1093/ismejo/wrag020,2026-01-14,30,3.973,10.15,extracted_data/September_2025/10.1101_2025.09.23.677255_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.09.24.678100_v3,10.1101/2025.09.24.678100,Mycobacterium tuberculosis growth arrest on propionate at acidic pH is suppressed by mutations in phoPR and pyrazinamide treatment,v3,2025-09-24,Microbiology,mBio,10.1128/mbio.02955-25,2026-01-14,80,1.885,4.35,extracted_data/November_2025/10.1101_2025.09.24.678100_v3.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.10.14.682272_v1,10.1101/2025.10.14.682272,Integrated transcriptomic and methylome analysis reveals retinoic acid pathway activation after decitabine treatment in EBV associated gastric cancer,v1,2025-10-14,Microbiology,mBio,10.1128/mbio.03148-25,2026-03-11,80,1.885,4.35,extracted_data/October_2025/10.1101_2025.10.14.682272_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.10.16.682918_v1,10.1101/2025.10.16.682918,Proximity Labelling Identifies Proteins Associated with HSV-2 pUL21 at Early and Late Times After Infection,v1,2025-10-16,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1014027,2026-03-02,74,1.987,4.73,extracted_data/October_2025/10.1101_2025.10.16.682918_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.10.25.684586_v1,10.1101/2025.10.25.684586,Species-Specific gB Ectodomain Interactions and Cytoplasmic Domain Stability Regulate Herpes Simplex Virus Fusion,v1,2025-10-25,Microbiology,mBio,10.1128/mbio.03424-25,2026-01-14,80,1.885,4.35,extracted_data/October_2025/10.1101_2025.10.25.684586_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.10.28.685107_v1,10.1101/2025.10.28.685107,The Mycobacterium tuberculosis ESX-5 secretion system enables carbon source utilization and growth in mice,v1,2025-10-28,Microbiology,mBio,10.1128/mbio.03500-25,2026-03-11,80,1.885,4.35,extracted_data/October_2025/10.1101_2025.10.28.685107_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.10.30.685510_v1,10.1101/2025.10.30.685510,Type VIIb secretion system recruits a dedicated cell wall hydrolase EssH to enable effector secretion by Staphylococcus aureus,v1,2025-10-30,Microbiology,mBio,10.1128/mbio.03196-25,2026-04-08,80,1.885,4.35,extracted_data/October_2025/10.1101_2025.10.30.685510_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.11.03.685801_v1,10.1101/2025.11.03.685801,A membrane-bound nuclease directly cleaves phage DNA during genome injection,v1,2025-11-03,Microbiology,Nature,10.1038/s41586-026-10207-1,2026-02-25,2,18.288,18.47,extracted_data/November_2025/10.1101_2025.11.03.685801_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.11.05.686718_v1,10.1101/2025.11.05.686718,HCMV promotes viral reactivation through the coordinated regulation of Notch signaling by UL8 and miR-UL36,v1,2025-11-05,Microbiology,mBio,10.1128/mbio.03377-25,2026-03-11,80,1.885,4.35,extracted_data/November_2025/10.1101_2025.11.05.686718_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.1101_2025.11.14.688536_v1,10.1101/2025.11.14.688536,Dissecting the homeodomain MAT locus and engineering novel tripolar and bipolar mating systems in Cryptococcus amylolentus,v1,2025-11-14,Microbiology,mBio,10.1128/mbio.00059-26,2026-04-08,80,1.885,4.35,extracted_data/November_2025/10.1101_2025.11.14.688536_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.64898_2025.12.04.692159_v1,10.64898/2025.12.04.692159,Differential targeting of human pyroptotic Caspase-5 and Caspase-4 by Shigella OspC2 and OspC3,v1,2025-12-04,Microbiology,mBio,10.1128/mbio.03855-25,2026-03-11,80,1.885,4.35,extracted_data/December_2025/10.64898_2025.12.04.692159_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.64898_2025.12.04.692339_v1,10.64898/2025.12.04.692339,An atypical F-type ATPase is necessary for the function of the antibody cleavage system MIB-MIP in mycoplasmas,v1,2025-12-04,Microbiology,PLOS Pathogens,10.1371/journal.ppat.1014043,2026-03-11,74,1.987,4.73,extracted_data/December_2025/10.64898_2025.12.04.692339_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.64898_2025.12.29.696836_v1,10.64898/2025.12.29.696836,Unraveling Candidatus Dermatophostum as a Novel Genus of Polyphosphate-Accumulating Organisms for High-Strength Wastewater Treatment,v1,2025-12-29,Microbiology,The ISME Journal,10.1093/ismejo/wrag032,2026-01-14,30,3.973,10.15,extracted_data/December_2025/10.64898_2025.12.29.696836_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
microbiology_imm_micro,10.64898_2026.01.07.698140_v1,10.64898/2026.01.07.698140,A teichoic acid-like wall modification associated with immune suppression is socially regulated in Streptococcus pyogenes,v1,2026-01-07,Microbiology,mBio,10.1128/mbio.03801-25,2026-04-08,80,1.885,4.35,extracted_data/January_2026/10.64898_2026.01.07.698140_v1.xml,top100_imm_micro_multi_no_elife_journals.csv
molecular_biology,10.1101_2024.10.01.616097_v1,10.1101/2024.10.01.616097,Interrogating the plasma proteome of repetitive head impact exposure and chronic traumatic encephalopathy,v1,2024-10-01,Molecular Biology,Molecular Neurodegeneration,10.1186/s13024-025-00860-x,2025-06-16,58,5.488,13.85,extracted_data/October_2024/10.1101_2024.10.01.616097_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.02.616235_v1,10.1101/2024.10.02.616235,Mechanism of DNA entrapment by the MukBEF SMC complex and its inhibition by a viral DNA mimic,v1,2024-10-02,Molecular Biology,Cell,10.1016/j.cell.2025.02.032,2025-05,3,22.612,30.22,extracted_data/October_2024/10.1101_2024.10.02.616235_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.02.616323_v1,10.1101/2024.10.02.616323,Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation,v1,2024-10-02,Molecular Biology,Nature Genetics,10.1038/s41588-026-02516-y,2026-04,9,16.586,16.08,extracted_data/October_2024/10.1101_2024.10.02.616323_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.03.615557_v1,10.1101/2024.10.03.615557,A bifunctional snoRNA with separable activities in guiding rRNA 2’-O-methylation and scaffolding gametogenesis effectors,v1,2024-10-03,Molecular Biology,Nature Communications,10.1038/s41467-025-58664-y,2025-04-05,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.03.615557_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.03.616461_v1,10.1101/2024.10.03.616461,Epitranscriptomic rRNA fingerprinting reveals tissue-of-origin and tumor-specific signatures,v1,2024-10-03,Molecular Biology,Molecular Cell,10.1016/j.molcel.2024.11.014,2025-01,26,9.051,12.04,extracted_data/October_2024/10.1101_2024.10.03.616461_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.07.617004_v1,10.1101/2024.10.07.617004,The Escherichia coli replication initiator DnaA is titrated on the chromosome,v1,2024-10-07,Molecular Biology,Nature Communications,10.1038/s41467-025-63147-1,2025-08-21,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.07.617004_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.08.617233_v1,10.1101/2024.10.08.617233,Cryo-EM structures of the E. coli Ton and Tol motor complexes,v1,2024-10-08,Molecular Biology,Nature Communications,10.1038/s41467-025-61286-z,2025-07-01,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.08.617233_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.09.617433_v1,10.1101/2024.10.09.617433,Sm-site containing mRNAs can accept Sm-rings and are downregulated in Spinal Muscular Atrophy,v1,2024-10-09,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf794,2025-08-11,34,7.776,16.90,extracted_data/October_2024/10.1101_2024.10.09.617433_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.14.618141_v1,10.1101/2024.10.14.618141,PAF1C allosterically activates CDK12/13 kinase during RNAPII transcript elongation,v1,2024-10-14,Molecular Biology,Molecular Cell,10.1016/j.molcel.2025.04.012,2025-05,26,9.051,12.04,extracted_data/October_2024/10.1101_2024.10.14.618141_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.14.618182_v2,10.1101/2024.10.14.618182,Integrative profiling of condensation-prone RNAs during early development,v2,2024-10-14,Molecular Biology,Cell Genomics,10.1016/j.xgen.2025.101065,2026-02,46,6.238,7.85,extracted_data/February_2025/10.1101_2024.10.14.618182_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.15.618543_v1,10.1101/2024.10.15.618543,Engineering mtDNA Deletions by Reconstituting End-Joining in Human Mitochondria,v1,2024-10-15,Molecular Biology,Cell,10.1016/j.cell.2025.02.009,2025-05,3,22.612,30.22,extracted_data/October_2024/10.1101_2024.10.15.618543_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.16.618579_v1,10.1101/2024.10.16.618579,RNA elements required for the high efficiency of West Nile Virus-induced ribosomal frameshifting,v1,2024-10-16,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkae1248,2025-01-24,34,7.776,16.90,extracted_data/October_2024/10.1101_2024.10.16.618579_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.17.618946_v1,10.1101/2024.10.17.618946,The ribosome-associated quality control factor TCF25 imposes K48 specificity on Listerin-mediated ubiquitination of nascent chains by binding and specifically orienting the acceptor ubiquitin,v1,2024-10-17,Molecular Biology,Genes & Development,10.1101/gad.352389.124,2025-05-01,96,4.005,4.89,extracted_data/October_2024/10.1101_2024.10.17.618946_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.17.618959_v1,10.1101/2024.10.17.618959,Targeted degradation of the HPV oncoprotein E6 reduces tumor burden in cervical cancer,v1,2024-10-17,Molecular Biology,Molecular Therapy,10.1016/j.ymthe.2025.08.033,2025-11,95,4.008,9.40,extracted_data/October_2024/10.1101_2024.10.17.618959_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.18.618793_v1,10.1101/2024.10.18.618793,Phosphorylation-dependent tuning of mRNA deadenylation rates,v1,2024-10-18,Molecular Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01688-1,2026-01,48,6.187,6.42,extracted_data/October_2024/10.1101_2024.10.18.618793_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.19.619198_v1,10.1101/2024.10.19.619198,Mechanism of Interaction Between the Transactivation Domain of N-MYC and the DNA-Binding Surface of TFIIIC5,v1,2024-10-19,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag181,2026-02-24,34,7.776,16.90,extracted_data/October_2024/10.1101_2024.10.19.619198_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.22.619113_v1,10.1101/2024.10.22.619113,Epigenetic control of Topoisomerase 1 activity presents a cancer vulnerability,v1,2024-10-22,Molecular Biology,Nature Communications,10.1038/s41467-025-62598-w,2025-08-12,71,4.761,14.63,extracted_data/October_2024/10.1101_2024.10.22.619113_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.23.619793_v1,10.1101/2024.10.23.619793,Sequence-dependent scale for translocon-mediated insertion of interfacial helices in membranes,v1,2024-10-23,Molecular Biology,Science Advances,10.1126/sciadv.ads6804,2025-02-21,79,4.324,12.06,extracted_data/October_2024/10.1101_2024.10.23.619793_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.24.620114_v1,10.1101/2024.10.24.620114,HT SpaceM: A High-Throughput and Reproducible Method for Small-Molecule Single-Cell Metabolomics,v1,2024-10-24,Molecular Biology,Cell,10.1016/j.cell.2025.08.015,2025-10,3,22.612,30.22,extracted_data/October_2024/10.1101_2024.10.24.620114_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.25.620326_v3,10.1101/2024.10.25.620326,Phosphorylation of HP1/Swi6 relieves competition with Suv39/Clr4 on nucleosomes and enables H3K9 trimethyl spreading,v3,2024-10-25,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1244,2025-11-26,34,7.776,16.90,extracted_data/September_2025/10.1101_2024.10.25.620326_v3.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.30.620894_v1,10.1101/2024.10.30.620894,Hydrophobic tails enable diverse functions of the extracellular chaperone clusterin,v1,2024-10-30,Molecular Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01631-4,2025-10,48,6.187,6.42,extracted_data/November_2024/10.1101_2024.10.30.620894_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.30.621095_v3,10.1101/2024.10.30.621095,Specific origin selection and excess functional MCM2-7 loading in ORC-deficient cells,v3,2024-10-30,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf518,2025-06-06,34,7.776,16.90,extracted_data/April_2025/10.1101_2024.10.30.621095_v3.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.30.621121_v1,10.1101/2024.10.30.621121,Replisome passage through the cohesin ring,v1,2024-10-30,Molecular Biology,Cell,10.1016/j.cell.2025.08.028,2025-10,3,22.612,30.22,extracted_data/November_2024/10.1101_2024.10.30.621121_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.10.31.621310_v1,10.1101/2024.10.31.621310,Chromatin-associated lncRNA-splicing factor condensates regulate hypoxia responsive RNA processing of genes pre-positioned near nuclear speckles,v1,2024-10-31,Molecular Biology,Molecular Cell,10.1016/j.molcel.2026.02.014,2026-03,26,9.051,12.04,extracted_data/November_2024/10.1101_2024.10.31.621310_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.01.621267_v1,10.1101/2024.11.01.621267,The short conserved region-2 of LARP4 interacts with ribosome-associated RACK1 and promotes translation,v1,2024-11-01,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf053,2025-01-24,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.01.621267_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.01.621414_v3,10.1101/2024.11.01.621414,Dominant-negative TP53 mutations potentiated by the HSF1-regulated proteostasis network,v3,2024-11-01,Molecular Biology,Molecular Cell,10.1016/j.molcel.2025.12.013,2026-01,26,9.051,12.04,extracted_data/November_2025/10.1101_2024.11.01.621414_v3.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.02.621631_v1,10.1101/2024.11.02.621631,Pre-rRNA spatial distribution and functional organization of the nucleolus,v1,2024-11-02,Molecular Biology,Nature,10.1038/s41586-025-09412-1,2025-10-02,7,18.288,18.47,extracted_data/November_2024/10.1101_2024.11.02.621631_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.05.622155_v1,10.1101/2024.11.05.622155,Direct observation of secondary nucleation in huntingtin amyloid formation by High-Speed Atomic Force Microscopy,v1,2024-11-05,Molecular Biology,Journal of the American Chemical Society,10.1021/jacs.5c05571,2025-06-25,55,5.554,15.01,extracted_data/November_2024/10.1101_2024.11.05.622155_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.07.622486_v1,10.1101/2024.11.07.622486,Functional divergence of TBP homologs through distinct DNA binding dynamics,v1,2024-11-07,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf436,2025-05-10,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.07.622486_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.08.622636_v2,10.1101/2024.11.08.622636,A multivalent adaptor mechanism drives the nuclear import of proteasomes,v2,2024-11-08,Molecular Biology,Nature Communications,10.1038/s41467-026-69162-0,2026-02-04,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.08.622636_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.12.623258_v2,10.1101/2024.11.12.623258,Chromatin architecture mapping by multiplex proximity tagging,v2,2024-11-12,Molecular Biology,Molecular Cell,10.1016/j.molcel.2025.06.018,2025-07,26,9.051,12.04,extracted_data/January_2025/10.1101_2024.11.12.623258_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.12.623278_v1,10.1101/2024.11.12.623278,Quantification of subcellular RNA localization through direct detection of RNA oxidation,v1,2024-11-12,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf139,2025-02-27,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.12.623278_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.12.623337_v1,10.1101/2024.11.12.623337,Cryo-EM structures of human ClpXP reveal mechanisms of assembly and proteolytic activation,v1,2024-11-12,Molecular Biology,Nature Communications,10.1038/s41467-025-67010-1,2026-01-27,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.12.623337_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.13.623409_v1,10.1101/2024.11.13.623409,A blueprint for biomolecular condensation driven by bacterial microcompartment encapsulation peptides,v1,2024-11-13,Molecular Biology,Nature Communications,10.1038/s41467-025-62772-0,2025-08-11,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.13.623409_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.13.623508_v1,10.1101/2024.11.13.623508,€ Harnessing Protein Language Model for Structure-Based Discovery of Highly Efficient and Robust PET Hydrolases,v1,2024-11-13,Molecular Biology,Nature Communications,10.1038/s41467-025-61599-z,2025-07-05,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.13.623508_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.14.623607_v1,10.1101/2024.11.14.623607,ATR safeguards replication forks against APOBEC3B-induced toxic PARP1 trapping,v1,2024-11-14,Molecular Biology,Science Advances,10.1126/sciadv.adu0437,2025-04-18,79,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.14.623607_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.15.623401_v1,10.1101/2024.11.15.623401,The mitochondrial methylation potential gates mitoribosome assembly,v1,2024-11-15,Molecular Biology,Nature Communications,10.1038/s41467-025-60977-x,2025-06-25,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.15.623401_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.16.623948_v1,10.1101/2024.11.16.623948,Biochemical principles of miRNA targeting in flies,v1,2024-11-16,Molecular Biology,Nature Communications,10.1038/s41467-026-68360-0,2026-01-20,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.16.623948_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.18.623114_v1,10.1101/2024.11.18.623114,Nanopore sequencing of intact aminoacylated tRNAs,v1,2024-11-18,Molecular Biology,Nature Communications,10.1038/s41467-025-62545-9,2025-08-20,71,4.761,14.63,extracted_data/November_2024/10.1101_2024.11.18.623114_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.21.624247_v3,10.1101/2024.11.21.624247,A compendium of bona fide reference markers for genuine plant extracellular vesicles and their degree of phylogenetic conservation,v3,2024-11-21,Molecular Biology,Journal of Extracellular Vesicles,10.1002/jev2.70147,2025-09,75,4.524,13.60,extracted_data/September_2025/10.1101_2024.11.21.624247_v3.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.25.625227_v1,10.1101/2024.11.25.625227,The histone chaperone Spt6 controls chromatin structure through its conserved N-terminal domain,v1,2024-11-25,Molecular Biology,Molecular Cell,10.1016/j.molcel.2025.08.020,2025-09,26,9.051,12.04,extracted_data/November_2024/10.1101_2024.11.25.625227_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.26.625387_v1,10.1101/2024.11.26.625387,Structure of the Tilapia lake virus nucleoprotein bound to RNA,v1,2024-11-26,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf112,2025-02-08,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.26.625387_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.26.625534_v1,10.1101/2024.11.26.625534,Yeast elongation factor homolog New1 protects a subset of mRNAs from degradation by no-go decay,v1,2024-11-26,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag047,2026-01-22,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.26.625534_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.28.625805_v1,10.1101/2024.11.28.625805,Structural basis for the synergistic assembly of the snRNA export complex,v1,2024-11-28,Molecular Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01595-5,2025-08,48,6.187,6.42,extracted_data/November_2024/10.1101_2024.11.28.625805_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.11.28.625806_v1,10.1101/2024.11.28.625806,The inflammasome sensor NLRP3 interacts with REV7 to maintain genome integrity through homologous recombination,v1,2024-11-28,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf554,2025-06-20,34,7.776,16.90,extracted_data/November_2024/10.1101_2024.11.28.625806_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.03.625240_v1,10.1101/2024.12.03.625240,High-throughput discovery and deep characterization of cyclin-CDK docking motifs,v1,2024-12-03,Molecular Biology,Nature Communications,10.1038/s41467-025-62765-z,2025-08-15,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.03.625240_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.04.626744_v1,10.1101/2024.12.04.626744,The RNA-binding protein PRRC2B preserves 5’ TOP mRNA during starvation to maintain ribosome biogenesis during nutrient recovery,v1,2024-12-04,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1334,2025-11-26,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.04.626744_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.05.626885_v2,10.1101/2024.12.05.626885,Scalable emulation of protein equilibrium ensembles with generative deep learning,v2,2024-12-05,Molecular Biology,Science,10.1126/science.adv9817,2025-08-14,19,10.416,15.26,extracted_data/February_2025/10.1101_2024.12.05.626885_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.06.627179_v1,10.1101/2024.12.06.627179,A direct interaction between the Chd1 CHCT domain and Rtf1 controls Chd1 distribution and nucleosome positioning on active genes,v1,2024-12-06,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf816,2025-08-27,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.06.627179_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.09.627537_v2,10.1101/2024.12.09.627537,Transcription factors form a ternary complex with NIPBL/MAU2 to localize cohesin at enhancers,v2,2024-12-09,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf415,2025-05-10,34,7.776,16.90,extracted_data/February_2025/10.1101_2024.12.09.627537_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.13.628372_v1,10.1101/2024.12.13.628372,Structural determinants of inverted Alu-mediated backsplicing revealed by -MaP and -JuMP,v1,2024-12-13,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf433,2025-05-10,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.13.628372_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.13.628398_v2,10.1101/2024.12.13.628398,Multiplex base editing of BCL11A regulatory elements to treat sickle cell disease,v2,2024-12-13,Molecular Biology,Cell Reports Medicine,10.1016/j.xcrm.2025.102376,2025-10,92,4.028,8.08,extracted_data/April_2025/10.1101_2024.12.13.628398_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.14.628468_v1,10.1101/2024.12.14.628468,Doublet decoding of tRNASer3 demonstrates plasticity of ribosomal decoding center,v1,2024-12-14,Molecular Biology,Nature Communications,10.1038/s41467-025-61016-5,2025-06-26,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.14.628468_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.16.628787_v2,10.1101/2024.12.16.628787,Vascular endothelial growth factor-D improves lung vascular integrity during acute lung injury,v2,2024-12-16,Molecular Biology,Circulation Research,10.1161/CIRCRESAHA.124.326094,2026-03-13,66,4.897,11.24,extracted_data/December_2024/10.1101_2024.12.16.628787_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.17.628571_v1,10.1101/2024.12.17.628571,Mbd4 and MutSα protect cells from spontaneous deamination of 5-methylcytosine,v1,2024-12-17,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1493,2026-01-14,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.17.628571_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.17.628791_v1,10.1101/2024.12.17.628791,Coupling CRISPR Scanning with Targeted Chromatin Accessibility Profiling using a Double-Stranded DNA Deaminase,v1,2024-12-17,Molecular Biology,Nature Methods,10.1038/s41592-025-02811-2,2025-10,8,17.251,13.51,extracted_data/December_2024/10.1101_2024.12.17.628791_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.19.627432_v1,10.1101/2024.12.19.627432,Silicon-rhodamine-enabled Identification (SeeID) for Near-Infrared Light Controlled Proximity Labeling In Vitro and In Vivo,v1,2024-12-19,Molecular Biology,Nature Communications,10.1038/s41467-025-63496-x,2025-08-30,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.19.627432_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.19.629292_v2,10.1101/2024.12.19.629292,Chromatin regulator HELLS mediates SSB repair and responses to DNA alkylation damage,v2,2024-12-19,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1201,2025-11-26,34,7.776,16.90,extracted_data/April_2025/10.1101_2024.12.19.629292_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.20.629258_v1,10.1101/2024.12.20.629258,The yeast CST and Polα/primase complexes act in concert to ensure proper telomere maintenance and protection,v1,2024-12-20,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf245,2025-04-10,34,7.776,16.90,extracted_data/December_2024/10.1101_2024.12.20.629258_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.20.629812_v1,10.1101/2024.12.20.629812,Robustness of ancestral sequence reconstruction to among-site evolutionary heterogeneity and epistasis,v1,2024-12-20,Molecular Biology,Molecular Biology and Evolution,10.1093/molbev/msaf084,2025-04-01,89,4.085,5.04,extracted_data/January_2025/10.1101_2024.12.20.629812_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.24.630243_v1,10.1101/2024.12.24.630243,Sex-specific transcriptome dynamics of Anopheles gambiae during embryonic development,v1,2024-12-24,Molecular Biology,Genes & Development,10.1101/gad.352572.124,2025-09-01,96,4.005,4.89,extracted_data/December_2024/10.1101_2024.12.24.630243_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.27.630525_v2,10.1101/2024.12.27.630525,"Glycerol-3-phosphate activates ChREBP, FGF21 transcription and lipogenesis in Citrin Deficiency",v2,2024-12-27,Molecular Biology,Nature Metabolism,10.1038/s42255-025-01399-3,2025-11-14,36,7.529,11.55,extracted_data/June_2025/10.1101_2024.12.27.630525_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.27.630546_v1,10.1101/2024.12.27.630546,Chemically-inducible CRISPR/Cas9 circuits for ultra-high dynamic range gene perturbation,v1,2024-12-27,Molecular Biology,Nature Communications,10.1038/s41467-025-67201-w,2025-12-12,71,4.761,14.63,extracted_data/December_2024/10.1101_2024.12.27.630546_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2024.12.31.630923_v1,10.1101/2024.12.31.630923,Structure of an LGR dimer – an evolutionary predecessor of glycoprotein hormone receptors,v1,2024-12-31,Molecular Biology,Nature Communications,10.1038/s41467-025-66676-x,2025-11-28,71,4.761,14.63,extracted_data/January_2025/10.1101_2024.12.31.630923_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.03.631217_v1,10.1101/2025.01.03.631217,"Loss of DHX36/G4R1, a G4 resolvase, drives genome instability and regulates innate immune gene expression in cancer cells",v1,2025-01-03,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf621,2025-06-20,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.03.631217_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.03.631235_v1,10.1101/2025.01.03.631235,Mechanism of nascent chain removal by the Ribosome-associated Quality Control complex,v1,2025-01-03,Molecular Biology,Nature Communications,10.1038/s41467-025-61235-w,2025-07-01,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.03.631235_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.03.631239_v1,10.1101/2025.01.03.631239,"RBPscan: A Quantitative, In Vivo Tool for Profiling RNA-Binding Protein Interactions",v1,2025-01-03,Molecular Biology,Molecular Cell,10.1016/j.molcel.2026.01.003,2026-02,26,9.051,12.04,extracted_data/January_2025/10.1101_2025.01.03.631239_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.06.631586_v2,10.1101/2025.01.06.631586,Structural basis of nucleosome recognition by the conserved Dsup and HMGN nucleosome-binding motif,v2,2025-01-06,Molecular Biology,Genes & Development,10.1101/gad.352720.125,2025-07-28,96,4.005,4.89,extracted_data/February_2025/10.1101_2025.01.06.631586_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.07.631643_v2,10.1101/2025.01.07.631643,Comparative CRISPRi screens reveal a human stem cell dependence on mRNA translation-coupled quality control,v2,2025-01-07,Molecular Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01616-3,2025-10,48,6.187,6.42,extracted_data/April_2025/10.1101_2025.01.07.631643_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.09.632133_v1,10.1101/2025.01.09.632133,TERRA R-loops trigger a switch in telomere maintenance towards break-induced replication and PrimPol-dependent repair,v1,2025-01-09,Molecular Biology,The EMBO Journal,10.1038/s44318-025-00502-4,2025-07-07,68,4.821,7.14,extracted_data/January_2025/10.1101_2025.01.09.632133_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.09.632184_v1,10.1101/2025.01.09.632184,The RING Finger E3 Ligase RNF25 Protects DNA Replication Forks Independently of its Canonical Roles in Ubiquitin Signaling,v1,2025-01-09,Molecular Biology,Nature Communications,10.1038/s41467-025-62368-8,2025-08-05,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.09.632184_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.13.632780_v1,10.1101/2025.01.13.632780,A prime editing strategy to rewrite the γ-globin promoters and reactivate fetal hemoglobin for sickle cell disease,v1,2025-01-13,Molecular Biology,Blood,10.1182/blood.2024028166,2025-11-27,51,5.823,7.31,extracted_data/January_2025/10.1101_2025.01.13.632780_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.15.633200_v1,10.1101/2025.01.15.633200,Melbournevirus encodes a shorter H2B-H2A doublet histone variant that forms structurally distinct nucleosome structures,v1,2025-01-15,Molecular Biology,Nature Communications,10.1038/s41467-025-62031-2,2025-07-26,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.15.633200_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.17.633520_v1,10.1101/2025.01.17.633520,The ISPpu9 insertion sequence of Pseudomonas putida KT2440 generates various circular intermediates enabling modular transposition,v1,2025-01-17,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf668,2025-07-19,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.17.633520_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.17.633588_v1,10.1101/2025.01.17.633588,REV7 associates with ATRIP and inhibits ATR kinase activity,v1,2025-01-17,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1527,2026-01-14,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.17.633588_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.17.633679_v1,10.1101/2025.01.17.633679,KIDINS220 and InsP8 safeguard the stepwise regulation of phosphate exporter XPR1,v1,2025-01-17,Molecular Biology,Molecular Cell,10.1016/j.molcel.2025.08.003,2025-09,26,9.051,12.04,extracted_data/January_2025/10.1101_2025.01.17.633679_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.18.633737_v1,10.1101/2025.01.18.633737,Nucleoplasmic Lamin A/C controls replication fork restart upon stress by modulating local H3K9me3 and ADP-ribosylation levels,v1,2025-01-18,Molecular Biology,Nature Communications,10.1038/s41467-025-66098-9,2025-11-29,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.18.633737_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.21.634015_v1,10.1101/2025.01.21.634015,Functional interplay between condensin I and topoisomerase IIα in single-molecule DNA compaction,v1,2025-01-21,Molecular Biology,Nature Communications,10.1038/s41467-025-62600-5,2025-08-06,71,4.761,14.63,extracted_data/January_2025/10.1101_2025.01.21.634015_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.24.634719_v2,10.1101/2025.01.24.634719,BAHCC1 promotes gene expression in neuronal cells by antagonizing SIN3A-HDAC1,v2,2025-01-24,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf650,2025-07-19,34,7.776,16.90,extracted_data/January_2025/10.1101_2025.01.24.634719_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.26.634913_v1,10.1101/2025.01.26.634913,Translational activators align mRNAs at the small mitoribosomal subunit for translation initiation,v1,2025-01-26,Molecular Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01726-y,2026-02,48,6.187,6.42,extracted_data/January_2025/10.1101_2025.01.26.634913_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.29.634372_v1,10.1101/2025.01.29.634372,Structural insights into transcriptional regulation by the helicase RECQL5,v1,2025-01-29,Molecular Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01611-8,2025-09,48,6.187,6.42,extracted_data/January_2025/10.1101_2025.01.29.634372_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.29.635449_v1,10.1101/2025.01.29.635449,Structural basis of RECQL5-induced RNA polymerase II transcription braking and subsequent reactivation,v1,2025-01-29,Molecular Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01586-6,2025-09,48,6.187,6.42,extracted_data/February_2025/10.1101_2025.01.29.635449_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.29.635606_v1,10.1101/2025.01.29.635606,DECIPHERING THE DARK SIDE OF HISTONE ADP-RIBOSYLATION: WHAT STRUCTURAL FEATURES OF DAMAGED NUCLEOSOME REGULATE THE ACTIVITIES OF PARP1 AND PARP2,v1,2025-01-29,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf864,2025-09-05,34,7.776,16.90,extracted_data/February_2025/10.1101_2025.01.29.635606_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.30.635641_v1,10.1101/2025.01.30.635641,A molecular switch at the yeast mitoribosomal tunnel exit controls cytochrome b synthesis,v1,2025-01-30,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf634,2025-07-08,34,7.776,16.90,extracted_data/February_2025/10.1101_2025.01.30.635641_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.31.635831_v2,10.1101/2025.01.31.635831,The core MICOS complex subunit Mic60 has been substituted by two cryptic mitofilin-containing proteins in Euglenozoa,v2,2025-01-31,Molecular Biology,Molecular Biology and Evolution,10.1093/molbev/msaf289,2025-10-29,89,4.085,5.04,extracted_data/August_2025/10.1101_2025.01.31.635831_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.31.635900_v3,10.1101/2025.01.31.635900,TRAF6 integrates innate immune signals to regulate glucose homeostasis via Parkin-dependent and-independent mitophagy,v3,2025-01-31,Molecular Biology,Science Advances,10.1126/sciadv.adw4153,2025-10-10,79,4.324,12.06,extracted_data/September_2025/10.1101_2025.01.31.635900_v3.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.01.31.635978_v2,10.1101/2025.01.31.635978,Widespread mono- and oligoadenylation direct small noncoding RNA maturation versus degradation fates,v2,2025-01-31,Molecular Biology,The EMBO Journal,10.1038/s44318-025-00655-2,2025-12-05,68,4.821,7.14,extracted_data/March_2025/10.1101_2025.01.31.635978_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.04.636303_v1,10.1101/2025.02.04.636303,Identification of actionable targeted protein degradation effector sites through Site-specific Ligand Incorporation-induced Proximity (SLIP),v1,2025-02-04,Molecular Biology,Journal of the American Chemical Society,10.1021/jacs.5c01420,2025-06-25,55,5.554,15.01,extracted_data/February_2025/10.1101_2025.02.04.636303_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.04.636546_v2,10.1101/2025.02.04.636546,Effective in vivo RNA base editing via engineered cytidine deaminase APOBECs fused with PUF proteins,v2,2025-02-04,Molecular Biology,Nature Communications,10.1038/s41467-025-64748-6,2025-11-04,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.04.636546_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.05.636709_v1,10.1101/2025.02.05.636709,"Multiplexing Light-Inducible Recombinases to Control Cell Fate, Boolean Logic, and Cell Patterning in Mammalian Cells",v1,2025-02-05,Molecular Biology,Science Advances,10.1126/sciadv.adt1971,2025-05-09,79,4.324,12.06,extracted_data/February_2025/10.1101_2025.02.05.636709_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.07.637039_v1,10.1101/2025.02.07.637039,The CST complex mediates a post-resection non-homologous end-joining repair pathway and promotes local deletions,v1,2025-02-07,Molecular Biology,Cell Genomics,10.1016/j.xgen.2025.100947,2025-10,46,6.238,7.85,extracted_data/February_2025/10.1101_2025.02.07.637039_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.12.637806_v1,10.1101/2025.02.12.637806,Donor transcription suppresses D-loops in cis and promotes genome stability,v1,2025-02-12,Molecular Biology,The EMBO Journal,10.1038/s44318-025-00541-x,2025-08-26,68,4.821,7.14,extracted_data/February_2025/10.1101_2025.02.12.637806_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.15.638447_v1,10.1101/2025.02.15.638447,SUMO2 Promotes Histone Pre-mRNA Processing by Stabilizing Histone Locus Body Interactions and Facilitating U7 snRNP Assembly,v1,2025-02-15,Molecular Biology,Genes & Development,10.1101/gad.352728.125,2025-07-10,96,4.005,4.89,extracted_data/February_2025/10.1101_2025.02.15.638447_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.17.638618_v1,10.1101/2025.02.17.638618,Cold-induced nucleosome dynamics linked to silencing of Arabidopsis FLC,v1,2025-02-17,Molecular Biology,Nature Communications,10.1038/s41467-025-60735-z,2025-07-01,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.17.638618_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.17.638704_v1,10.1101/2025.02.17.638704,The nuclear pore complex connects energy sensing to transcriptional plasticity in longevity,v1,2025-02-17,Molecular Biology,Molecular Cell,10.1016/j.molcel.2025.08.035,2025-10,26,9.051,12.04,extracted_data/February_2025/10.1101_2025.02.17.638704_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.18.638820_v1,10.1101/2025.02.18.638820,MoDorado: Enhanced detection of tRNA modifications in nanopore sequencing by off-label use of modification callers,v1,2025-02-18,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf795,2025-08-11,34,7.776,16.90,extracted_data/February_2025/10.1101_2025.02.18.638820_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.19.638869_v2,10.1101/2025.02.19.638869,Molecular interactome of HNRNPU reveals regulatory networks in neuronal differentiation and DNA methylation,v2,2025-02-19,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag107,2026-02-05,34,7.776,16.90,extracted_data/December_2025/10.1101_2025.02.19.638869_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.19.639109_v2,10.1101/2025.02.19.639109,Chromatin retained MUSHER lncRNA integrates ABA and DOG1 signalling pathways to enhance Arabidopsis seeds dormancy,v2,2025-02-19,Molecular Biology,Nature Communications,10.1038/s41467-025-62991-5,2025-08-14,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.02.19.639109_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.19.639186_v1,10.1101/2025.02.19.639186,PRDM16 controls smooth muscle cell fate in atherosclerosis,v1,2025-02-19,Molecular Biology,Nature Cardiovascular Research,10.1038/s44161-025-00737-8,2025-10-17,87,4.096,3.82,extracted_data/February_2025/10.1101_2025.02.19.639186_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.21.639568_v1,10.1101/2025.02.21.639568,Composition and RNA binding specificity of metazoan RNase MRP,v1,2025-02-21,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf829,2025-08-27,34,7.776,16.90,extracted_data/February_2025/10.1101_2025.02.21.639568_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.22.639343_v1,10.1101/2025.02.22.639343,TEMI: Tissue Expansion Mass Spectrometry Imaging,v1,2025-02-22,Molecular Biology,Nature Methods,10.1038/s41592-025-02664-9,2025-05,8,17.251,13.51,extracted_data/February_2025/10.1101_2025.02.22.639343_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.23.639725_v1,10.1101/2025.02.23.639725,RNA Transcripts Serve as a Template for Double-Strand Break Repair in Human Cells,v1,2025-02-23,Molecular Biology,Nature Communications,10.1038/s41467-025-59510-x,2025-05-10,71,4.761,14.63,extracted_data/February_2025/10.1101_2025.02.23.639725_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.24.639907_v1,10.1101/2025.02.24.639907,Kinetic control of mammalian transcription elongation,v1,2025-02-24,Molecular Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01707-1,2026-02,48,6.187,6.42,extracted_data/March_2025/10.1101_2025.02.24.639907_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.25.640040_v1,10.1101/2025.02.25.640040,Biochemical reconstitution of sister chromatid cohesion establishment during DNA replication,v1,2025-02-25,Molecular Biology,Molecular Cell,10.1016/j.molcel.2025.08.026,2025-10,26,9.051,12.04,extracted_data/March_2025/10.1101_2025.02.25.640040_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.25.640098_v1,10.1101/2025.02.25.640098,Chemical inhibition of Exon Junction Complex assembly impairs mRNA localization and neural stem cells ciliogenesis,v1,2025-02-25,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1200,2025-11-13,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.02.25.640098_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.02.28.640380_v2,10.1101/2025.02.28.640380,Rescuing the bacterial replisome at a nick requires recombinational repair and helicase reloading,v2,2025-02-28,Molecular Biology,Nature Communications,10.1038/s41467-025-66550-w,2025-11-26,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.02.28.640380_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.04.641482_v1,10.1101/2025.03.04.641482,Targeted BDNF upregulation via upstream open reading frame disruption,v1,2025-03-04,Molecular Biology,Molecular Therapy,10.1016/j.ymthe.2025.12.024,2026-03,95,4.008,9.40,extracted_data/March_2025/10.1101_2025.03.04.641482_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.10.642372_v1,10.1101/2025.03.10.642372,Multi-domain O-GlcNAcase structures reveal allosteric regulatory mechanisms,v1,2025-03-10,Molecular Biology,Nature Communications,10.1038/s41467-025-63893-2,2025-10-03,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.10.642372_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.10.642431_v1,10.1101/2025.03.10.642431,tRNA synthetase activity is required for stress granule and P-body assembly,v1,2025-03-10,Molecular Biology,Genes & Development,10.1101/gad.353535.125,2026-04-01,96,4.005,4.89,extracted_data/March_2025/10.1101_2025.03.10.642431_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.11.642572_v1,10.1101/2025.03.11.642572,Evolutionary hotspots of structural variation drive inter-individual differences in the expression of fusion transcripts in the human brain,v1,2025-03-11,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1361,2025-11-26,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.11.642572_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.12.642750_v1,10.1101/2025.03.12.642750,Tissue-specific mutagenesis from endogenous guanine damage is suppressed by Polκ and DNA repair,v1,2025-03-12,Molecular Biology,Nature Communications,10.1038/s41467-025-67072-1,2025-12-12,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.12.642750_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.13.642955_v2,10.1101/2025.03.13.642955,Accessory subunits of PRC2 mimic H3K27me3 to restrict the spread of Polycomb domains,v2,2025-03-13,Molecular Biology,Molecular Cell,10.1016/j.molcel.2026.02.011,2026-03,26,9.051,12.04,extracted_data/December_2025/10.1101_2025.03.13.642955_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.13.643037_v1,10.1101/2025.03.13.643037,PYM1 limits non-canonical Exon Junction Complex occupancy in a gene architecture dependent manner to tune mRNA expression,v1,2025-03-13,Molecular Biology,Nature Communications,10.1038/s41467-025-63455-6,2025-08-30,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.13.643037_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.13.643086_v1,10.1101/2025.03.13.643086,Granzyme-targeting quenched activity-based probes for assessing tumor response to immunotherapy,v1,2025-03-13,Molecular Biology,Journal of the American Chemical Society,10.1021/jacs.5c04392,2025-10-22,55,5.554,15.01,extracted_data/March_2025/10.1101_2025.03.13.643086_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.14.643126_v2,10.1101/2025.03.14.643126,Autoregulation of RPL7B by inhibition of a structural splicing enhancer,v2,2025-03-14,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf739,2025-07-19,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.03.14.643126_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.15.641804_v1,10.1101/2025.03.15.641804,Systematic comparison of dCas9-based DNA methylation epimodifiers over time indicates efficient on-target and widespread off-target effects,v1,2025-03-15,Molecular Biology,Genome Biology,10.1186/s13059-026-03967-6,2026-01-31,53,5.710,9.04,extracted_data/March_2025/10.1101_2025.03.15.641804_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.15.643430_v1,10.1101/2025.03.15.643430,A spatio-temporal brain miRNA expression atlas identifies sex-independent age-related microglial driven miR-155-5p increase,v1,2025-03-15,Molecular Biology,Nature Communications,10.1038/s41467-025-59860-6,2025-05-17,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.15.643430_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.16.643548_v1,10.1101/2025.03.16.643548,Degradation of the intestinal mucus layer by the ETEC protease EatA is species specific determined by the structure of the MUC2 mucin,v1,2025-03-16,Molecular Biology,Nature Communications,10.1038/s41467-025-68037-0,2025-12-31,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.16.643548_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.17.643278_v1,10.1101/2025.03.17.643278,The human RIF1-Long isoform interacts with BRCA1 to promote recombinational fork repair under DNA replication stress,v1,2025-03-17,Molecular Biology,Nature Communications,10.1038/s41467-025-60817-y,2025-07-01,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.17.643278_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.17.643644_v1,10.1101/2025.03.17.643644,The SMC Hinge is a Selective Gate for Obstacle Bypass,v1,2025-03-17,Molecular Biology,Nature Communications,10.1038/s41467-025-65408-5,2025-11-25,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.17.643644_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.17.643711_v1,10.1101/2025.03.17.643711,Proteins are a source of glycans found in preparations of glycoRNA,v1,2025-03-17,Molecular Biology,Experimental & Molecular Medicine,10.1038/s12276-025-01575-1,2025-11-14,97,4.001,12.18,extracted_data/March_2025/10.1101_2025.03.17.643711_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.17.643836_v1,10.1101/2025.03.17.643836,Relaxed DNA substrate specificity of transposases involved in programmed genome rearrangement,v1,2025-03-17,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf577,2025-07-08,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.17.643836_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.19.644219_v2,10.1101/2025.03.19.644219,Comprehensive analysis of yeast +1 ribosomal frameshifting unveils a novel stimulator supporting two distinct frameshifting mechanisms,v2,2025-03-19,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1301,2025-11-26,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.03.19.644219_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.20.644192_v1,10.1101/2025.03.20.644192,Bacterial ubiquitin ligase engineered for small molecule and protein target identification,v1,2025-03-20,Molecular Biology,The EMBO Journal,10.1038/s44318-025-00665-0,2026-01-03,68,4.821,7.14,extracted_data/March_2025/10.1101_2025.03.20.644192_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.21.644485_v1,10.1101/2025.03.21.644485,Structural basis for human chondroitin sulfate chain polymerization,v1,2025-03-21,Molecular Biology,Nature Communications,10.1038/s41467-025-66787-5,2025-11-26,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.21.644485_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.21.644610_v1,10.1101/2025.03.21.644610,Structure of a transcribing Pol II-DSIF-SPT6-U1 snRNP complex,v1,2025-03-21,Molecular Biology,Nature Communications,10.1038/s41467-025-60979-9,2025-07-01,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.21.644610_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.21.644654_v1,10.1101/2025.03.21.644654,Precision-edited histone tails disrupt polycistronic gene expression controls in trypanosomes,v1,2025-03-21,Molecular Biology,Nature Communications,10.1038/s41467-025-61480-z,2025-07-04,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.21.644654_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.24.645077_v1,10.1101/2025.03.24.645077,Protein-primed DNA homopolymer synthesis by an antiviral reverse transcriptase,v1,2025-03-24,Molecular Biology,Nature,10.1038/s41586-025-09179-5,2025-07-31,7,18.288,18.47,extracted_data/March_2025/10.1101_2025.03.24.645077_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.25.645221_v1,10.1101/2025.03.25.645221,A SET domain-containing protein and HCF-1 maintain transgenerational epigenetic memory,v1,2025-03-25,Molecular Biology,Nature Communications,10.1038/s41467-025-68200-7,2026-01-09,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.25.645221_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.27.645797_v1,10.1101/2025.03.27.645797,Structural basis for selective inhibition of human GABA transporter GAT3,v1,2025-03-27,Molecular Biology,Nature Communications,10.1038/s41467-026-68479-0,2026-01-29,71,4.761,14.63,extracted_data/March_2025/10.1101_2025.03.27.645797_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.28.645885_v2,10.1101/2025.03.28.645885,Loss of SETDB1-mediated H3K9me3 in human neural progenitor cells leads to transcriptional activation of L1 retrotransposons,v2,2025-03-28,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag100,2026-02-05,34,7.776,16.90,extracted_data/November_2025/10.1101_2025.03.28.645885_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.28.646004_v1,10.1101/2025.03.28.646004,Serine Recombinase PinR Inverts Cryptic Prophage DNA to Block Adsorption of Phages,v1,2025-03-28,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1041,2025-10-14,34,7.776,16.90,extracted_data/March_2025/10.1101_2025.03.28.646004_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.03.30.646171_v1,10.1101/2025.03.30.646171,Damage-induced phosphorylation of BRC-1/BRD-1 in meiosis preserves germline integrity,v1,2025-03-30,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf945,2025-09-23,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.03.30.646171_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.01.643995_v1,10.1101/2025.04.01.643995,Mechanistic insights into direct DNA and RNA strand transfer and dynamic protein exchange of SSB and RPA,v1,2025-04-01,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf642,2025-06-20,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.04.01.643995_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.03.647028_v1,10.1101/2025.04.03.647028,Structural Basis for Promoter Recognition and Transcription Factor Binding and Release in Human Mitochondria,v1,2025-04-03,Molecular Biology,Molecular Cell,10.1016/j.molcel.2025.06.016,2025-08,26,9.051,12.04,extracted_data/April_2025/10.1101_2025.04.03.647028_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.03.647077_v1,10.1101/2025.04.03.647077,"ConSeqUMI, an error-free nanopore sequencing pipeline to identify and extract individual nucleic acid molecules from heterogeneous samples",v1,2025-04-03,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1304,2025-11-26,34,7.776,16.90,extracted_data/April_2025/10.1101_2025.04.03.647077_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.10.648254_v2,10.1101/2025.04.10.648254,"An intrinsically disordered region of Drosha selectively promotes miRNA biogenesis, independent of tissue-specific Microprocessor condensates",v2,2025-04-10,Molecular Biology,Genes & Development,10.1101/gad.352815.125,2026-01-01,96,4.005,4.89,extracted_data/July_2025/10.1101_2025.04.10.648254_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.11.648421_v2,10.1101/2025.04.11.648421,"A noncanonical Pol III-dependent, Microprocessor-independent biogenesis pathway generates a germline enriched miRNA family",v2,2025-04-11,Molecular Biology,Genes & Development,10.1101/gad.352481.124,2025-07-14,96,4.005,4.89,extracted_data/June_2025/10.1101_2025.04.11.648421_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.13.648568_v1,10.1101/2025.04.13.648568,Single cell spatial proteomics maps human liver zonation patterns and their vulnerability to fibrosis,v1,2025-04-13,Molecular Biology,Nature Metabolism,10.1038/s42255-026-01459-2,2026-02-20,36,7.529,11.55,extracted_data/April_2025/10.1101_2025.04.13.648568_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.14.648778_v1,10.1101/2025.04.14.648778,Characterization of PROTAC specificity and endogenous protein interactomes using ProtacID,v1,2025-04-14,Molecular Biology,Nature Communications,10.1038/s41467-025-63357-7,2025-08-29,71,4.761,14.63,extracted_data/April_2025/10.1101_2025.04.14.648778_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.18.649583_v1,10.1101/2025.04.18.649583,Multiple human enhancer RNAs contain long translated open reading frames,v1,2025-04-18,Molecular Biology,Genes & Development,10.1101/gad.352944.125,2025-12-01,96,4.005,4.89,extracted_data/April_2025/10.1101_2025.04.18.649583_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.22.650049_v1,10.1101/2025.04.22.650049,Mouse digit AAV gene delivery into fibroblasts regulates regenerative outcome,v1,2025-04-22,Molecular Biology,Science Advances,10.1126/sciadv.adz0229,2026-01-09,79,4.324,12.06,extracted_data/April_2025/10.1101_2025.04.22.650049_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.23.650188_v1,10.1101/2025.04.23.650188,Editing of the polyubiquitin architecture on the collided ribosome maintains persistent RQC activity,v1,2025-04-23,Molecular Biology,The EMBO Journal,10.1038/s44318-025-00568-0,2025-09-16,68,4.821,7.14,extracted_data/April_2025/10.1101_2025.04.23.650188_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.26.650401_v1,10.1101/2025.04.26.650401,Phage lysis protein LysM acts as a wedge to block MurJ conformational changes,v1,2025-04-26,Molecular Biology,Science Advances,10.1126/sciadv.ady8083,2025-10-10,79,4.324,12.06,extracted_data/April_2025/10.1101_2025.04.26.650401_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.04.30.651563_v4,10.1101/2025.04.30.651563,An AI-Guided Framework Reveals Conserved Features Governing microRNA Strand Selection,v4,2025-04-30,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1510,2026-01-14,34,7.776,16.90,extracted_data/November_2025/10.1101_2025.04.30.651563_v4.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.05.01.651612_v1,10.1101/2025.05.01.651612,A kinetic ruler controls mRNA poly(A) tail length,v1,2025-05-01,Molecular Biology,Genes & Development,10.1101/gad.352912.125,2025-11-01,96,4.005,4.89,extracted_data/May_2025/10.1101_2025.05.01.651612_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.05.08.652854_v1,10.1101/2025.05.08.652854,Identification of RNF114 as ADPr-Ub reader through non-hydrolysable ubiquitinated ADP-ribose,v1,2025-05-08,Molecular Biology,Nature Communications,10.1038/s41467-025-61111-7,2025-07-09,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.08.652854_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.05.12.653514_v1,10.1101/2025.05.12.653514,RG motifs promote piRNA-mediated gene silencing in C. elegans,v1,2025-05-12,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1331,2025-11-26,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.12.653514_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.05.14.653371_v1,10.1101/2025.05.14.653371,"The Viral AlphaFold Database of monomers and homodimers reveals conserved protein folds in viruses of bacteria, archaea, and eukaryotes",v1,2025-05-14,Molecular Biology,Science Advances,10.1126/sciadv.adz8560,2025-10-03,79,4.324,12.06,extracted_data/May_2025/10.1101_2025.05.14.653371_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.05.21.655257_v1,10.1101/2025.05.21.655257,Decoding the molecular logic of rapidly evolving ZAD zinc-finger proteins in Drosophila,v1,2025-05-21,Molecular Biology,Science Advances,10.1126/sciadv.ady7568,2026-02-27,79,4.324,12.06,extracted_data/May_2025/10.1101_2025.05.21.655257_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.05.22.655471_v1,10.1101/2025.05.22.655471,RHD6LA regulates root hair responses to both symbionts and commensals,v1,2025-05-22,Molecular Biology,Nature Communications,10.1038/s41467-026-70504-1,2026-03-10,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.22.655471_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.05.28.656609_v1,10.1101/2025.05.28.656609,Control of retrotransposon-driven activation of the interferon response by the double-stranded RNA binding protein DGCR8,v1,2025-05-28,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag190,2026-02-24,34,7.776,16.90,extracted_data/May_2025/10.1101_2025.05.28.656609_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.05.28.656632_v1,10.1101/2025.05.28.656632,Co-transcriptional folding orchestrates sequential multi-effector sensing by a glycine tandem riboswitch,v1,2025-05-28,Molecular Biology,Nature Communications,10.1038/s41467-026-69648-x,2026-02-14,71,4.761,14.63,extracted_data/May_2025/10.1101_2025.05.28.656632_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.05.657979_v1,10.1101/2025.06.05.657979,Dynamic DnaA-DnaB interactions at oriC coordinate the loading and coupled translocation of two DnaB helicases for bidirectional replication,v1,2025-06-05,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1474,2026-01-14,34,7.776,16.90,extracted_data/June_2025/10.1101_2025.06.05.657979_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.06.658024_v1,10.1101/2025.06.06.658024,Competing 5’ splice sites of SRC1/HEH1 are marked for alternative splicing by U5 and U6 snRNAs during the B to Bact transition of the spliceosome,v1,2025-06-06,Molecular Biology,Nature Communications,10.1038/s41467-025-67659-8,2025-12-16,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.06.658024_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.06.658275_v1,10.1101/2025.06.06.658275,H3K4me1 directs H3K36me2 and H3K36me3 deposition in land plants,v1,2025-06-06,Molecular Biology,Nature Communications,10.1038/s41467-026-69632-5,2026-02-16,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.06.658275_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.10.658647_v1,10.1101/2025.06.10.658647,Molecular Mechanisms of DNMT3A-3L-Mediated de novo DNA Methylation on Chromatin,v1,2025-06-10,Molecular Biology,Nature Structural & Molecular Biology,10.1038/s41594-025-01704-4,2026-01,48,6.187,6.42,extracted_data/June_2025/10.1101_2025.06.10.658647_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.10.658865_v1,10.1101/2025.06.10.658865,Exapted CRISPR-Cas12f homologs drive RNA-guided transcription,v1,2025-06-10,Molecular Biology,Nature,10.1038/s41586-026-10166-7,2026-03-04,7,18.288,18.47,extracted_data/June_2025/10.1101_2025.06.10.658865_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.12.659315_v1,10.1101/2025.06.12.659315,Structural Basis for Cas9-Directed Spacer Acquisition in Type II-A CRISPR-Cas Systems,v1,2025-06-12,Molecular Biology,Molecular Cell,10.1016/j.molcel.2026.01.024,2026-03,26,9.051,12.04,extracted_data/June_2025/10.1101_2025.06.12.659315_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.13.659592_v1,10.1101/2025.06.13.659592,Structural basis and pathological implications of the dimeric OS9-SEL1L-HRD1 ERAD Core Complex,v1,2025-06-13,Molecular Biology,Nature Communications,10.1038/s41467-026-68777-7,2026-01-27,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.13.659592_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.14.659615_v1,10.1101/2025.06.14.659615,Structural insights into scaffold-guided assembly of the Pseudomonas phage D3 capsid,v1,2025-06-14,Molecular Biology,Nature Communications,10.1038/s41467-025-66648-1,2025-11-23,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.14.659615_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.15.659774_v1,10.1101/2025.06.15.659774,High-resolution spatial mapping of cell state and lineage dynamics in vivo with PEtracer,v1,2025-06-15,Molecular Biology,Science,10.1126/science.adx3800,2025-10-16,19,10.416,15.26,extracted_data/June_2025/10.1101_2025.06.15.659774_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.19.660503_v1,10.1101/2025.06.19.660503,Extended Shine-Dalgarno motifs govern translation initiation in Staphylococcus aureus,v1,2025-06-19,Molecular Biology,Nature Communications,10.1038/s41467-026-69079-8,2026-02-12,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.19.660503_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.20.660682_v2,10.1101/2025.06.20.660682,Co-transcriptional splicing changes combine with reduced productive transcription initiation for cold-induced repression of FLC,v2,2025-06-20,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1462,2026-01-05,34,7.776,16.90,extracted_data/July_2025/10.1101_2025.06.20.660682_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.23.660989_v1,10.1101/2025.06.23.660989,Loss of cell-autonomously secreted laminin-α2 drives muscle stem cell dysfunction in LAMA2-related muscular dystrophy,v1,2025-06-23,Molecular Biology,Nature Communications,10.1038/s41467-025-65703-1,2025-11-27,71,4.761,14.63,extracted_data/June_2025/10.1101_2025.06.23.660989_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.29.660377_v1,10.1101/2025.06.29.660377,Genome-wide extraction of differentially methylated DNA regions using adapter-anchored proximity primers,v1,2025-06-29,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag056,2026-01-22,34,7.776,16.90,extracted_data/July_2025/10.1101_2025.06.29.660377_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.06.30.662380_v1,10.1101/2025.06.30.662380,Plagl1 and Lrrc58 control mammalian body size by triggering target-directed microRNA degradation of miR-322 and miR-503,v1,2025-06-30,Molecular Biology,Genes & Development,10.1101/gad.353138.125,2026-02-01,96,4.005,4.89,extracted_data/July_2025/10.1101_2025.06.30.662380_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.07.17.664523_v1,10.1101/2025.07.17.664523,Genome-Wide Investigation of Transcription Factor Occupancy and Dynamics Using cFOOT-seq,v1,2025-07-17,Molecular Biology,Protein & Cell,10.1093/procel/pwaf071,2025-11-01,60,5.392,7.91,extracted_data/July_2025/10.1101_2025.07.17.664523_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.07.23.666269_v1,10.1101/2025.07.23.666269,Capsid Restructuring Activates Semi-Conservative dsRNA Transcription in Cystovirus ɸ6,v1,2025-07-23,Molecular Biology,Molecular Cell,10.1016/j.molcel.2025.12.025,2026-01,26,9.051,12.04,extracted_data/July_2025/10.1101_2025.07.23.666269_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.07.25.666894_v1,10.1101/2025.07.25.666894,Decoding efficacy and resistance space at a drug binding site,v1,2025-07-25,Molecular Biology,Nature Communications,10.1038/s41467-026-69187-5,2026-02-04,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.25.666894_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.07.29.667437_v1,10.1101/2025.07.29.667437,Cell-specific responses of Anopheles gambiae fat body to blood feeding and infection at a single nuclei resolution,v1,2025-07-29,Molecular Biology,Nature Communications,10.1038/s41467-026-69806-1,2026-02-24,71,4.761,14.63,extracted_data/July_2025/10.1101_2025.07.29.667437_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.07.30.667716_v1,10.1101/2025.07.30.667716,A lncRNA drives developmentally-timed decay of all members of an essential microRNA family,v1,2025-07-30,Molecular Biology,Genes & Development,10.1101/gad.353314.125,2026-03-06,96,4.005,4.89,extracted_data/August_2025/10.1101_2025.07.30.667716_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.07.31.667791_v1,10.1101/2025.07.31.667791,Target-Stabilized Base Editors Enable Robust High-Fidelity RNA Editing,v1,2025-07-31,Molecular Biology,Nature Communications,10.1038/s41467-026-69835-w,2026-02-25,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.07.31.667791_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.08.01.667725_v2,10.1101/2025.08.01.667725,"A SWI/SNF-specific Ig-like domain, SWIFT, is a transcription factor binding platform",v2,2025-08-01,Molecular Biology,Science,10.1126/science.aeb3627,2026-04-02,19,10.416,15.26,extracted_data/December_2025/10.1101_2025.08.01.667725_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.08.06.668741_v1,10.1101/2025.08.06.668741,Temporal transcriptional rhythms govern coral-symbiont function and microbiome dynamics,v1,2025-08-06,Molecular Biology,Cell Host & Microbe,10.1016/j.chom.2026.01.004,2026-02,38,7.067,11.68,extracted_data/August_2025/10.1101_2025.08.06.668741_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.08.08.669300_v1,10.1101/2025.08.08.669300,USP7 deubiquitinase stabilizes FAN1 to support DNA crosslink repair and suppress CAG repeat expansion,v1,2025-08-08,Molecular Biology,Nature Communications,10.1038/s41467-026-70051-9,2026-03-06,71,4.761,14.63,extracted_data/August_2025/10.1101_2025.08.08.669300_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.08.09.669456_v2,10.1101/2025.08.09.669456,Complement C3 recognition by C3 convertases,v2,2025-08-09,Molecular Biology,Science Advances,10.1126/sciadv.adz5404,2026-02-20,79,4.324,12.06,extracted_data/November_2025/10.1101_2025.08.09.669456_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.08.13.670102_v1,10.1101/2025.08.13.670102,Conformational State of Myosin’s Disordered Loop 2 Structure Mediates Actomyosin Association During Crossbridge Formation,v1,2025-08-13,Molecular Biology,Protein Science,10.1002/pro.70437,2026-02,73,4.657,6.35,extracted_data/August_2025/10.1101_2025.08.13.670102_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.08.22.671742_v1,10.1101/2025.08.22.671742,Sni445 recruits box C/D snoRNPs snR4 and snR45 to guide ribosomal RNA acetylation by Kre33,v1,2025-08-22,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag030,2026-01-22,34,7.776,16.90,extracted_data/August_2025/10.1101_2025.08.22.671742_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.09.01.673448_v1,10.1101/2025.09.01.673448,HPF1 REGULATES THE FORMATION OF FUS-DEPENDENT COMPARTMENTS BY PARP1 AND PARP2 ACTIVATION ON DAMAGED DNA,v1,2025-09-01,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag183,2026-02-24,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.01.673448_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.09.03.674035_v2,10.1101/2025.09.03.674035,Glc7/PP1 triggers Paf1 complex dissociation from RNA polymerase II to enable transcription termination,v2,2025-09-03,Molecular Biology,Genes & Development,10.1101/gad.353379.125,2026-03-06,96,4.005,4.89,extracted_data/November_2025/10.1101_2025.09.03.674035_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.09.04.674178_v1,10.1101/2025.09.04.674178,Beyond DNA Binding: single C2H2 zinc fingers with adjacent β-strands mediate dimerization in Drosophila transcription factors,v1,2025-09-04,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1425,2026-01-05,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.04.674178_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.09.06.674645_v1,10.1101/2025.09.06.674645,Anticodon Edited Transfer RNAs (ACE-tRNAs) Encoded as Therapeutic Nonviral Minimal DNA Vectors,v1,2025-09-06,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag082,2026-02-05,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.06.674645_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.09.16.676703_v1,10.1101/2025.09.16.676703,Gene-sized DNA insertion at genomic safe harbors in human cells using a site-directed transposase,v1,2025-09-16,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1316,2025-11-26,34,7.776,16.90,extracted_data/September_2025/10.1101_2025.09.16.676703_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.09.22.677805_v1,10.1101/2025.09.22.677805,Ampk alpha2 T172 Activation Dictates Exercise Performance and Energy Transduction in Skeletal Muscle,v1,2025-09-22,Molecular Biology,Science Advances,10.1126/sciadv.aeb3338,2026-02-27,79,4.324,12.06,extracted_data/September_2025/10.1101_2025.09.22.677805_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.10.04.677962_v3,10.1101/2025.10.04.677962,"Cat_Wiz: A stereochemistry-guided toolkit for locating, diagnosing and annotating Mg2+ ions in RNA structures",v3,2025-10-04,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag120,2026-02-05,34,7.776,16.90,extracted_data/January_2026/10.1101_2025.10.04.677962_v3.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.10.13.682236_v1,10.1101/2025.10.13.682236,An antagonistic epigenetic mechanism regulating gene expression in pollen revealed through single-nucleus multiomics,v1,2025-10-13,Molecular Biology,Nature Communications,10.1038/s41467-025-65686-z,2025-11-27,71,4.761,14.63,extracted_data/October_2025/10.1101_2025.10.13.682236_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.10.15.682518_v1,10.1101/2025.10.15.682518,Reciprocal targeting of the unfolded protein response regulator Xbp1 and the Dom-A nucleosome remodeler in Drosophila,v1,2025-10-15,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag178,2026-02-24,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.10.15.682518_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.10.21.683660_v1,10.1101/2025.10.21.683660,PolyA tail segmentation improves the stability of the template DNA and increases the translatability of in vitro transcribed mRNA,v1,2025-10-21,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkaf1412,2026-01-14,34,7.776,16.90,extracted_data/October_2025/10.1101_2025.10.21.683660_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.10.30.685668_v1,10.1101/2025.10.30.685668,Sleep-dependent clearance of brain lipids by peripheral blood cells,v1,2025-10-30,Molecular Biology,Nature,10.1038/s41586-025-10050-w,2026-03-19,7,18.288,18.47,extracted_data/November_2025/10.1101_2025.10.30.685668_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.11.16.688718_v2,10.1101/2025.11.16.688718,Reliable repurposing of the antibody interactome inside the cell,v2,2025-11-16,Molecular Biology,Nature Communications,10.1038/s41467-026-69057-0,2026-01-31,71,4.761,14.63,extracted_data/November_2025/10.1101_2025.11.16.688718_v2.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.11.16.688748_v1,10.1101/2025.11.16.688748,Global Mapping of circRNA-Target RNA Interactions Reveals P-Body-Mediated Translational Repression,v1,2025-11-16,Molecular Biology,Molecular Cell,10.1016/j.molcel.2026.01.018,2026-03,26,9.051,12.04,extracted_data/November_2025/10.1101_2025.11.16.688748_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.11.20.689410_v1,10.1101/2025.11.20.689410,Structural basis for BCL7B-mediated ncBAF-nucleosome engagement,v1,2025-11-20,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag092,2026-02-05,34,7.776,16.90,extracted_data/November_2025/10.1101_2025.11.20.689410_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.1101_2025.11.27.690929_v1,10.1101/2025.11.27.690929,Rethinking Alzheimer’s: Novel miRNAs Illuminate a Disease Beyond the Brain,v1,2025-11-27,Molecular Biology,Molecular Psychiatry,10.1038/s41380-026-03487-6,2026-02-13,93,4.022,10.52,extracted_data/December_2025/10.1101_2025.11.27.690929_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.64898_2025.12.19.695565_v1,10.64898/2025.12.19.695565,The role of the VirB ligand CTP in the molecular mechanism of transcriptional anti-silencing in Shigella flexneri,v1,2025-12-19,Molecular Biology,Nucleic Acids Research,10.1093/nar/gkag115,2026-02-24,34,7.776,16.90,extracted_data/December_2025/10.64898_2025.12.19.695565_v1.xml,top100_bgm_multi_journals.csv
molecular_biology,10.64898_2026.01.13.699287_v1,10.64898/2026.01.13.699287,Butyrate extends health and lifespan in mice with mitochondrial deficiency,v1,2026-01-13,Molecular Biology,Nature Communications,10.1038/s41467-026-70547-4,2026-03-13,71,4.761,14.63,extracted_data/January_2026/10.64898_2026.01.13.699287_v1.xml,top100_bgm_multi_journals.csv
neuro_200,10.1101_2025.11.13.687902_v1,10.1101/2025.11.13.687902,The retinal light response is modulated by an mGluR5-mediated retrograde signal from ON-bipolar cells to photoreceptors,v1,2025-11-13,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.2277-24.2025,2026-01-14,67,1.963,3.78,extracted_data/November_2025/10.1101_2025.11.13.687902_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.20.644367_v1,10.1101/2025.03.20.644367,Theta activity supports landmark-based correction of naturalistic human path integration,v1,2025-03-20,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1005-25.2025,2025-11-05,67,1.963,3.78,extracted_data/March_2025/10.1101_2025.03.20.644367_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.04.647211_v1,10.1101/2025.04.04.647211,Dual-site beta transcranial alternating current stimulation during a bimanual coordination task modulates functional connectivity between motor areas,v1,2025-04-04,Neuroscience,Brain Stimulation,10.1016/j.brs.2025.08.011,2025-09,40,2.666,4.97,extracted_data/April_2025/10.1101_2025.04.04.647211_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.14.617868_v2,10.1101/2024.10.14.617868,"Deficient Memory, Long-Term Potentiation and Hippocampal Synaptic Plasticity in Galectin-4-Deficient Mice",v2,2024-10-14,Neuroscience,Biological Psychiatry,10.1016/j.biopsych.2025.10.006,2025-10,16,4.684,5.68,extracted_data/April_2025/10.1101_2024.10.14.617868_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.20.629715_v1,10.1101/2024.12.20.629715,Asymmetries in foveal vision,v1,2024-12-20,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0055-25.2025,2025-09-03,67,1.963,3.78,extracted_data/December_2024/10.1101_2024.12.20.629715_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.30.621133_v2,10.1101/2024.10.30.621133,"Consistent hierarchies of single-neuron timescales in mice, macaques and humans",v2,2024-10-30,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.2155-24.2025,2025-05-07,67,1.963,3.78,extracted_data/November_2024/10.1101_2024.10.30.621133_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.10.08.680699_v3,10.1101/2025.10.08.680699,Rapid inversion of singleton distractor representations underlies learned attentional suppression,v3,2025-10-08,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1898-25.2026,2026-03-11,67,1.963,3.78,extracted_data/January_2026/10.1101_2025.10.08.680699_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.10.05.680498_v1,10.1101/2025.10.05.680498,Convergent information flows explain recurring firing patterns in cerebral cortex,v1,2025-10-05,Neuroscience,Nature Neuroscience,10.1038/s41593-025-02128-5,2026-02,2,11.197,12.23,extracted_data/October_2025/10.1101_2025.10.05.680498_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.18.660247_v1,10.1101/2025.06.18.660247,Potential beneficial effects of PD-1/PD-L1 blockade in Alzheimer’s disease: A systematic review and meta-analysis of preclinical and clinical studies,v1,2025-06-18,Neuroscience,Molecular Psychiatry,10.1038/s41380-025-03413-2,2026-02,23,4.022,10.52,extracted_data/June_2025/10.1101_2025.06.18.660247_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.25.624854_v1,10.1101/2024.11.25.624854,A versatile mouse model to advance human microglia transplantation research in neurodegenerative diseases,v1,2024-11-25,Neuroscience,Molecular Neurodegeneration,10.1186/s13024-025-00823-2,2025-03-11,13,5.488,13.85,extracted_data/November_2024/10.1101_2024.11.25.624854_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.07.16.665122_v1,10.1101/2025.07.16.665122,NKG2D receptor ligands are cell surface biomarkers for injured murine and human nociceptive sensory neurons,v1,2025-07-16,Neuroscience,Journal of Neuroinflammation,10.1186/s12974-025-03675-1,2025-12-29,28,3.183,10.01,extracted_data/July_2025/10.1101_2025.07.16.665122_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.06.627143_v3,10.1101/2024.12.06.627143,"Delayed, Reduced and Redundant: Information Processing of Prediction Errors during Human Sleep",v3,2024-12-06,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1648-25.2026,2026-03-18,67,1.963,3.78,extracted_data/August_2025/10.1101_2024.12.06.627143_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.31.635932_v1,10.1101/2025.01.31.635932,"Tsc1 Deletion in Purkinje Neurons Disrupts the Axon Initial Segment, Impairing Excitability and Cerebellar Function",v1,2025-01-31,Neuroscience,Neurobiology of Disease,10.1016/j.nbd.2025.106856,2025-04,64,2.009,5.60,extracted_data/February_2025/10.1101_2025.01.31.635932_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.06.636960_v1,10.1101/2025.02.06.636960,Glutamatergic synaptic resilience to overexpressed human alpha-synuclein,v1,2025-02-06,Neuroscience,npj Parkinson's Disease,10.1038/s41531-025-01085-x,2025-08-12,32,2.914,7.79,extracted_data/February_2025/10.1101_2025.02.06.636960_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.24.625092_v1,10.1101/2024.11.24.625092,"Multimodal, multifaceted Imaging-based Human Brain White Matter Atlas",v1,2024-11-24,Neuroscience,Science Bulletin,10.1016/j.scib.2025.08.021,2026-02,42,2.614,9.37,extracted_data/November_2024/10.1101_2024.11.24.625092_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.13.623526_v1,10.1101/2024.11.13.623526,Decomposing Cognitive Processes in the mPFC During Self-Thinking,v1,2024-11-13,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.2378-24.2025,2025-05-28,67,1.963,3.78,extracted_data/November_2024/10.1101_2024.11.13.623526_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.18.649592_v1,10.1101/2025.04.18.649592,Sleep firing rate homeostasis is disrupted in mild parkinsonism,v1,2025-04-18,Neuroscience,npj Parkinson's Disease,10.1038/s41531-025-01256-w,2026-01-21,32,2.914,7.79,extracted_data/April_2025/10.1101_2025.04.18.649592_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.05.668165_v1,10.1101/2025.08.05.668165,Unilateral online ultrasound stimulation of early visual cortex suppresses responses to contralateral visual stimuli,v1,2025-08-05,Neuroscience,Brain Stimulation,10.1016/j.brs.2025.103023,2026-03,40,2.666,4.97,extracted_data/August_2025/10.1101_2025.08.05.668165_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.19.624253_v1,10.1101/2024.11.19.624253,Molecular Polymorphism of tau aggregates in Pick’s disease,v1,2024-11-19,Neuroscience,Neurobiology of Disease,10.1016/j.nbd.2025.107104,2025-11,64,2.009,5.60,extracted_data/November_2024/10.1101_2024.11.19.624253_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.10.617607_v1,10.1101/2024.10.10.617607,Convergent depression of activity-dependent bulk endocytosis in rodent models of autism spectrum disorders,v1,2024-10-10,Neuroscience,Molecular Autism,10.1186/s13229-025-00660-6,2025-04-16,90,1.671,5.48,extracted_data/October_2024/10.1101_2024.10.10.617607_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.03.657562_v1,10.1101/2025.06.03.657562,"The spatial coding of touch is defined in intrinsic, limb-specific coordinates: an EEG study",v1,2025-06-03,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1089-25.2025,2026-02-04,67,1.963,3.78,extracted_data/June_2025/10.1101_2025.06.03.657562_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.20.629583_v2,10.1101/2024.12.20.629583,Abundant non-inclusion α-synuclein pathology in Lewy body-negative LRRK2-mutant cases,v2,2024-12-20,Neuroscience,Acta Neuropathologica,10.1007/s00401-025-02871-w,2025-05-02,18,4.483,8.03,extracted_data/March_2025/10.1101_2024.12.20.629583_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.24.661140_v1,10.1101/2025.06.24.661140,Medial Frontal Theta Reduction Impairs Rule Switching via Prediction Error,v1,2025-06-24,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1236-25.2025,2026-01-07,67,1.963,3.78,extracted_data/June_2025/10.1101_2025.06.24.661140_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.16.649203_v1,10.1101/2025.04.16.649203,Feature-tuned synaptic inputs to somatostatin interneurons drive context-dependent processing,v1,2025-04-16,Neuroscience,Neuron,10.1016/j.neuron.2025.12.021,2026-04,9,6.755,9.96,extracted_data/April_2025/10.1101_2025.04.16.649203_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.03.657581_v1,10.1101/2025.06.03.657581,"Telomere-driven senescence accelerates tau pathology, neuroinflammation and neurodegeneration in a tauopathy mouse model",v1,2025-06-03,Neuroscience,Acta Neuropathologica Communications,10.1186/s40478-025-02118-5,2025-09-29,44,2.588,5.41,extracted_data/June_2025/10.1101_2025.06.03.657581_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.27.630541_v2,10.1101/2024.12.27.630541,Decoding sexual dimorphism of the sex-shared nervous system at single-neuron resolution,v2,2024-12-27,Neuroscience,Science Advances,10.1126/sciadv.adv9106,2025-07-11,19,4.324,12.06,extracted_data/May_2025/10.1101_2024.12.27.630541_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.27.640592_v1,10.1101/2025.02.27.640592,Decoding the neural basis of sensory phenotypes in autism,v1,2025-02-27,Neuroscience,Biological Psychiatry: Cognitive Neuroscience and Neuroimaging,10.1016/j.bpsc.2025.12.013,2026-01,57,2.124,3.49,extracted_data/February_2025/10.1101_2025.02.27.640592_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.07.647672_v2,10.1101/2025.04.07.647672,Sex-Specific Metabolic and Central Effects of GLP-1–Estradiol Conjugate in Middle-Aged Rats on a Standard or Western Diet,v2,2025-04-07,Neuroscience,"Brain, Behavior, and Immunity",10.1016/j.bbi.2025.106088,2025-11,38,2.704,7.42,extracted_data/August_2025/10.1101_2025.04.07.647672_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.17.618853_v1,10.1101/2024.10.17.618853,Does Unfairness Evoke Anger or Disgust? A Quantitative Neurofunctional Dissection Based on 25 Years of Neuroimaging,v1,2024-10-17,Neuroscience,Neuroscience & Biobehavioral Reviews,10.1016/j.neubiorev.2025.106356,2025-11,29,3.076,8.13,extracted_data/October_2024/10.1101_2024.10.17.618853_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.24.625066_v4,10.1101/2024.11.24.625066,Brain Feature Maps Reveal Progressive Animal-Feature Representations in the Ventral Stream,v4,2024-11-24,Neuroscience,Science Advances,10.1126/sciadv.adq7342,2025-04-25,19,4.324,12.06,extracted_data/January_2025/10.1101_2024.11.24.625066_v4.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.26.672190_v1,10.1101/2025.08.26.672190,Helicobacter pylori infection and α-synuclein pathology drive parallel neurodegenerative pathways in the substantia nigra,v1,2025-08-26,Neuroscience,Journal of Neuroinflammation,10.1186/s12974-025-03596-z,2025-12-22,28,3.183,10.01,extracted_data/August_2025/10.1101_2025.08.26.672190_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.07.28.666086_v1,10.1101/2025.07.28.666086,A spinal origin for the obligate flexor synergy in the non-human primate: Implications for control of reaching,v1,2025-07-28,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1878-25.2026,2026-04-15,67,1.963,3.78,extracted_data/July_2025/10.1101_2025.07.28.666086_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.23.625001_v1,10.1101/2024.11.23.625001,The Alzheimer’s Disease Risk Genes MS4A4A And MS4A6A Cooperate to Negatively Regulate Trem2 and Microglia states,v1,2024-11-23,Neuroscience,Neuron,10.1016/j.neuron.2025.11.022,2026-03,9,6.755,9.96,extracted_data/November_2024/10.1101_2024.11.23.625001_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.05.616808_v2,10.1101/2024.10.05.616808,Layer 6 corticothalamic neurons induce high gamma oscillations through cortico-cortical and cortico-thalamo-cortical pathways,v2,2024-10-05,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0094-25.2025,2025-10-15,67,1.963,3.78,extracted_data/January_2025/10.1101_2024.10.05.616808_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.09.10.675426_v1,10.1101/2025.09.10.675426,Integration of memory and sensory information in skilled sequence production,v1,2025-09-10,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1797-25.2026,2026-04-01,67,1.963,3.78,extracted_data/September_2025/10.1101_2025.09.10.675426_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.09.19.677215_v1,10.1101/2025.09.19.677215,Tau oligomers modulate synapse fate by eliciting progressive bipartite synapse dysregulation and synapse loss,v1,2025-09-19,Neuroscience,Molecular Neurodegeneration,10.1186/s13024-026-00928-2,2026-01-22,13,5.488,13.85,extracted_data/September_2025/10.1101_2025.09.19.677215_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.07.647589_v2,10.1101/2025.04.07.647589,Competition between tool and hand motion impairs movement planning in limb apraxia,v2,2025-04-07,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0692-25.2025,2025-10-15,67,1.963,3.78,extracted_data/June_2025/10.1101_2025.04.07.647589_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.18.619112_v3,10.1101/2024.10.18.619112,Hippocampal place cell sequences are impaired in a rat model of Fragile X Syndrome,v3,2024-10-18,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1978-24.2025,2025-04-09,67,1.963,3.78,extracted_data/February_2025/10.1101_2024.10.18.619112_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.28.656641_v1,10.1101/2025.05.28.656641,SNCA triplication disrupts proteostasis and extracellular architecture prior to neurodegeneration in human midbrain organoids,v1,2025-05-28,Neuroscience,npj Parkinson's Disease,10.1038/s41531-026-01292-0,2026-02-16,32,2.914,7.79,extracted_data/May_2025/10.1101_2025.05.28.656641_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.15.618497_v1,10.1101/2024.10.15.618497,Neuropeptide Dynamics Coordinate Layered Plasticity Mechanisms Adapting Drosophila Circadian Behavior to Changing Environment,v1,2024-10-15,Neuroscience,Science Advances,10.1126/sciadv.adt7168,2025-08-29,19,4.324,12.06,extracted_data/October_2024/10.1101_2024.10.15.618497_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.21.644222_v4,10.1101/2025.03.21.644222,Frontoparietal Hubs Leverage Probabilistic Representations and Integrated Uncertainty to Guide Cognitive Flexibility,v4,2025-03-21,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0989-25.2025,2025-12-03,67,1.963,3.78,extracted_data/October_2025/10.1101_2025.03.21.644222_v4.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.29.620933_v1,10.1101/2024.10.29.620933,Medial septum parvalbumin-expressing inhibitory neurons are impaired in a mouse model of Dravet Syndrome,v1,2024-10-29,Neuroscience,Epilepsia,10.1111/epi.18532,2025-10,49,2.371,6.45,extracted_data/November_2024/10.1101_2024.10.29.620933_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.20.644347_v1,10.1101/2025.03.20.644347,All-optical electrophysiology reveals behavior-dependent dynamics of excitation and inhibition in the hippocampus,v1,2025-03-20,Neuroscience,Neuron,10.1016/j.neuron.2025.12.040,2026-02,9,6.755,9.96,extracted_data/March_2025/10.1101_2025.03.20.644347_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.21.639531_v1,10.1101/2025.02.21.639531,New insights into the 17β-hydroxysteroid dehydrogenase type 10 and amyloid-β 42 derived cytotoxicity relevant to Alzheimer’s disease,v1,2025-02-21,Neuroscience,Alzheimer's Research & Therapy,10.1186/s13195-025-01821-8,2025-07-23,36,2.709,7.32,extracted_data/February_2025/10.1101_2025.02.21.639531_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.24.630007_v1,10.1101/2024.12.24.630007,Atypical Visual Selective Attention in Children with Dyslexia: Evidence from N2pc and PD,v1,2024-12-24,Neuroscience,NeuroImage,10.1016/j.neuroimage.2025.121281,2025-07,60,2.074,4.96,extracted_data/December_2024/10.1101_2024.12.24.630007_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.22.629295_v2,10.1101/2024.12.22.629295,Sensory expectations shape neural population dynamics in motor circuits,v2,2024-12-22,Neuroscience,Nature,10.1038/s41586-025-09690-9,2025-12-18,1,18.288,18.47,extracted_data/March_2025/10.1101_2024.12.22.629295_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.21.660835_v1,10.1101/2025.06.21.660835,β-bursting as a sensitive neural marker of inhibitory control in healthy older adults: a linear mixed-effects modelling and threshold-free cluster approach,v1,2025-06-21,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1151-25.2026,2026-03-25,67,1.963,3.78,extracted_data/June_2025/10.1101_2025.06.21.660835_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.06.641237_v1,10.1101/2025.03.06.641237,Regulation of polyamine interconversion enzymes affects α-Synuclein levels and toxicity in a Drosophila model of Parkinson’s disease,v1,2025-03-06,Neuroscience,npj Parkinson's Disease,10.1038/s41531-025-01087-9,2025-08-06,32,2.914,7.79,extracted_data/March_2025/10.1101_2025.03.06.641237_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.04.647157_v2,10.1101/2025.04.04.647157,Attentional engagement with target and distractor streams predicts speech comprehension in multitalker environments,v2,2025-04-04,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0657-25.2025,2025-12-03,67,1.963,3.78,extracted_data/September_2025/10.1101_2025.04.04.647157_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.05.627027_v2,10.1101/2024.12.05.627027,Cholinergic waves have a modest influence on the transcriptome of retinal ganglion cells,v2,2024-12-05,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0165-25.2025,2025-08-27,67,1.963,3.78,extracted_data/January_2025/10.1101_2024.12.05.627027_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.03.616520_v1,10.1101/2024.10.03.616520,Same bi-directional modulation of contrast appearance for voluntary presaccadic attention and involuntary exogenous attention,v1,2024-10-03,Neuroscience,Cognition,10.1016/j.cognition.2025.106343,2026-02,88,1.686,3.21,extracted_data/October_2024/10.1101_2024.10.03.616520_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.27.662064_v1,10.1101/2025.06.27.662064,Sparkling Water Consumption Mitigates Cognitive Fatigue during Prolonged Esports Play,v1,2025-06-27,Neuroscience,Computers in Human Behavior Reports,10.1016/j.chbr.2026.100943,2026-03,85,1.709,7.77,extracted_data/July_2025/10.1101_2025.06.27.662064_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.07.16.665161_v1,10.1101/2025.07.16.665161,A C. elegans model of familial Alzheimer’s disease shows age-dependent synaptic degeneration independent of amyloid β-peptide,v1,2025-07-16,Neuroscience,Neurobiology of Disease,10.1016/j.nbd.2026.107267,2026-02,64,2.009,5.60,extracted_data/July_2025/10.1101_2025.07.16.665161_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.28.645906_v3,10.1101/2025.03.28.645906,"Discovery, Interruption, and Updating of Auditory Regularities in Memory: Evidence from Low-Frequency Brain Dynamics in Human MEG",v3,2025-03-28,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0629-25.2025,2026-01-14,67,1.963,3.78,extracted_data/April_2025/10.1101_2025.03.28.645906_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.19.638988_v2,10.1101/2025.02.19.638988,Target-Specificity and Repeatability in Neuro-Cardiac-Guided TMS for Heart-Brain Coupling,v2,2025-02-19,Neuroscience,Translational Psychiatry,10.1038/s41398-026-03879-w,2026-02-07,48,2.453,6.10,extracted_data/December_2025/10.1101_2025.02.19.638988_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.20.659060_v3,10.1101/2025.06.20.659060,The origins of time: a systematic review of the neural signatures of temporal prediction in infancy,v3,2025-06-20,Neuroscience,Developmental Cognitive Neuroscience,10.1016/j.dcn.2025.101655,2026-01,58,2.094,5.03,extracted_data/October_2025/10.1101_2025.06.20.659060_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.09.13.676039_v1,10.1101/2025.09.13.676039,Early synaptic pathology is associated with small tau aggregates in Alzheimer’s disease,v1,2025-09-13,Neuroscience,Acta Neuropathologica,10.1007/s00401-026-02977-9,2026-01-23,18,4.483,8.03,extracted_data/September_2025/10.1101_2025.09.13.676039_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.26.640409_v1,10.1101/2025.02.26.640409,Reduced harmonic complexity of brain parenchymal cardiovascular pulse waveforms in Alzheimer’s disease,v1,2025-02-26,Neuroscience,NeuroImage,10.1016/j.neuroimage.2025.121503,2025-11,60,2.074,4.96,extracted_data/March_2025/10.1101_2025.02.26.640409_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.15.648986_v1,10.1101/2025.04.15.648986,Temporal–orbitofrontal pathway regulates choices across physical reward and visual novelty,v1,2025-04-15,Neuroscience,Neuron,10.1016/j.neuron.2025.12.011,2026-04,9,6.755,9.96,extracted_data/April_2025/10.1101_2025.04.15.648986_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.14.618285_v3,10.1101/2024.10.14.618285,Fast and robust visual object recognition in young children,v3,2024-10-14,Neuroscience,Science Advances,10.1126/sciadv.ads6821,2025-07-04,19,4.324,12.06,extracted_data/May_2025/10.1101_2024.10.14.618285_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.11.642725_v1,10.1101/2025.03.11.642725,Energy inefficiency underpinning brain state dysregulation in individuals with major depressive disorder,v1,2025-03-11,Neuroscience,Nature Mental Health,10.1038/s44220-025-00583-4,2026-02-12,43,2.613,3.82,extracted_data/March_2025/10.1101_2025.03.11.642725_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.08.631867_v1,10.1101/2025.01.08.631867,Correlation between circadian and photoperiodic latitudinal clines in Drosophila littoralis,v1,2025-01-08,Neuroscience,Open Biology,10.1098/rsob.240403,2025-03-01,74,1.843,3.60,extracted_data/January_2025/10.1101_2025.01.08.631867_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.10.14.682389_v1,10.1101/2025.10.14.682389,Microglial morphology reflects cognitive status in the aging rat brain,v1,2025-10-14,Neuroscience,"Brain, Behavior, and Immunity",10.1016/j.bbi.2026.106533,2026-07,38,2.704,7.42,extracted_data/October_2025/10.1101_2025.10.14.682389_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.22.650065_v1,10.1101/2025.04.22.650065,Altered auditory maturation in Fragile X syndrome and its involvement in audiogenic seizure susceptibility,v1,2025-04-22,Neuroscience,Autism Research,10.1002/aur.70152,2026-01,93,1.616,6.09,extracted_data/April_2025/10.1101_2025.04.22.650065_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.05.636731_v1,10.1101/2025.02.05.636731,Down syndrome with Alzheimer’s disease brains have increased iron and associated lipid peroxidation consistent with ferroptosis,v1,2025-02-05,Neuroscience,Alzheimer's & Dementia,10.1002/alz.70322,2025-06,26,3.600,6.85,extracted_data/February_2025/10.1101_2025.02.05.636731_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.15.649017_v1,10.1101/2025.04.15.649017,Survey of hippocampal responses to sound in naïve mice reveals widespread activation by broadband noise onsets,v1,2025-04-15,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0929-25.2025,2026-01-21,67,1.963,3.78,extracted_data/April_2025/10.1101_2025.04.15.649017_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.15.669922_v1,10.1101/2025.08.15.669922,Meta-analysis of genetic mapping studies in mice reveals candidate epilepsy modifier genes that are outside the current drug development landscape,v1,2025-08-15,Neuroscience,Epilepsia,10.1111/epi.70035,2026-03,49,2.371,6.45,extracted_data/August_2025/10.1101_2025.08.15.669922_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.11.627897_v1,10.1101/2024.12.11.627897,Lifespan Normative Models of White Matter Fractional Anisotropy: Applications to Early Psychosis,v1,2024-12-11,Neuroscience,Biological Psychiatry,10.1016/j.biopsych.2025.07.021,2026-04,16,4.684,5.68,extracted_data/December_2024/10.1101_2024.12.11.627897_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.22.629311_v1,10.1101/2024.12.22.629311,Neurodevelopmental deviations in schizophrenia: Evidences from multimodal connectome-based brain ages,v1,2024-12-22,Neuroscience,Progress in Neuro-Psychopharmacology and Biological Psychiatry,10.1016/j.pnpbp.2025.111498,2025-10,78,1.768,4.48,extracted_data/December_2024/10.1101_2024.12.22.629311_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.15.647522_v3,10.1101/2025.04.15.647522,Toward Unified Biomarkers for Focal Epilepsy,v3,2025-04-15,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0879-25.2025,2026-01-07,67,1.963,3.78,extracted_data/September_2025/10.1101_2025.04.15.647522_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.22.624801_v2,10.1101/2024.11.22.624801,Large-scale Signal Propagation Modes in the Human Brain,v2,2024-11-22,Neuroscience,NeuroImage,10.1016/j.neuroimage.2025.121357,2025-09,60,2.074,4.96,extracted_data/February_2025/10.1101_2024.11.22.624801_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.23.661109_v2,10.1101/2025.06.23.661109,Heterosynaptic interactions between dorsal and ventral hippocampus in individual medium spiny neurons of the nucleus accumbens ventromedial shell,v2,2025-06-23,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1225-25.2026,2026-03-11,67,1.963,3.78,extracted_data/December_2025/10.1101_2025.06.23.661109_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.27.629676_v1,10.1101/2024.12.27.629676,An Independent Coding Scheme for Distance versus Position in the Hippocampus,v1,2024-12-27,Neuroscience,Current Biology,10.1016/j.cub.2025.07.050,2025-09,37,2.707,4.50,extracted_data/December_2024/10.1101_2024.12.27.629676_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.64898_2026.01.12.699018_v1,10.64898/2026.01.12.699018,Multimodal imaging suggests potential immune-vascular contributions to altered regional brain perfusion and oxygen metabolism in Post-COVID-19 Syndrome,v1,2026-01-12,Neuroscience,"Brain, Behavior, and Immunity",10.1016/j.bbi.2026.106480,2026-05,38,2.704,7.42,extracted_data/January_2026/10.64898_2026.01.12.699018_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.30.651445_v1,10.1101/2025.04.30.651445,The China Brain Multi-omics Atlas Project (CBMAP),v1,2025-04-30,Neuroscience,Molecular Psychiatry,10.1038/s41380-025-03250-3,2026-01,23,4.022,10.52,extracted_data/May_2025/10.1101_2025.04.30.651445_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.15.633167_v1,10.1101/2025.01.15.633167,Oligodendroglia vulnerability in the human dorsal striatum in Parkinson’s disease,v1,2025-01-15,Neuroscience,Acta Neuropathologica,10.1007/s00401-025-02884-5,2025-05-05,18,4.483,8.03,extracted_data/January_2025/10.1101_2025.01.15.633167_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.02.626375_v1,10.1101/2024.12.02.626375,Environmental exposures and familial background alter the induction of neuropathology and inflammation after SARS-CoV-2 infection,v1,2024-12-02,Neuroscience,npj Parkinson's Disease,10.1038/s41531-025-00925-0,2025-04-23,32,2.914,7.79,extracted_data/December_2024/10.1101_2024.12.02.626375_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.23.650182_v1,10.1101/2025.04.23.650182,Neuronal Hyperexcitability: A Key to Unravelling Hippocampal Synaptic Dysfunctions in Lafora Disease,v1,2025-04-23,Neuroscience,Epilepsia,10.1111/epi.70024,2026-03,49,2.371,6.45,extracted_data/April_2025/10.1101_2025.04.23.650182_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.02.631088_v3,10.1101/2025.01.02.631088,Lower cortical activation and altered functional connectivity characterize passive auditory spatial attention in ASD,v3,2025-01-02,Neuroscience,Autism Research,10.1002/aur.70120,2025-11,93,1.616,6.09,extracted_data/July_2025/10.1101_2025.01.02.631088_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.02.641039_v2,10.1101/2025.03.02.641039,Signaling of trans-saccadic prediction error by foveal neurons of the monkey superior colliculus,v2,2025-03-02,Neuroscience,PLOS Biology,10.1371/journal.pbio.3003246,2025-06-23,39,2.691,5.46,extracted_data/May_2025/10.1101_2025.03.02.641039_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.05.636657_v2,10.1101/2025.02.05.636657,Age-related differences in the association between REM sleep and the polygenic risk for Parkinson’s disease,v2,2025-02-05,Neuroscience,Annals of Neurology,10.1002/ana.78112,2026-04,25,3.736,6.52,extracted_data/October_2025/10.1101_2025.02.05.636657_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.13.653703_v1,10.1101/2025.05.13.653703,Global motor system suppression as the primary mechanism of human action stopping: challenging the pause-then-cancel model,v1,2025-05-13,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0447-25.2025,2025-08-27,67,1.963,3.78,extracted_data/May_2025/10.1101_2025.05.13.653703_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.20.629619_v2,10.1101/2024.12.20.629619,Increased cerebrospinal fluid and plasma apoE glycosylation is associated with reduced levels of Alzheimer’s disease biomarkers,v2,2024-12-20,Neuroscience,Alzheimer's Research & Therapy,10.1186/s13195-025-01795-7,2025-07-10,36,2.709,7.32,extracted_data/January_2025/10.1101_2024.12.20.629619_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.07.18.665370_v1,10.1101/2025.07.18.665370,Internalization of exogenous myelin by oligodendroglia promotes lineage progression,v1,2025-07-18,Neuroscience,Glia,10.1002/glia.70132,2026-03,50,2.317,5.56,extracted_data/July_2025/10.1101_2025.07.18.665370_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.07.07.663543_v1,10.1101/2025.07.07.663543,Precision Functional Mapping of the Individual Human Brain Near Birth,v1,2025-07-07,Neuroscience,Developmental Cognitive Neuroscience,10.1016/j.dcn.2025.101663,2026-04,58,2.094,5.03,extracted_data/July_2025/10.1101_2025.07.07.663543_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.22.660973_v1,10.1101/2025.06.22.660973,Optimal inhibitory-to-excitatory ratio governs slow and fast oscillations for enhanced neural communication,v1,2025-06-22,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0848-25.2025,2026-01-14,67,1.963,3.78,extracted_data/June_2025/10.1101_2025.06.22.660973_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.11.01.686029_v1,10.1101/2025.11.01.686029,"Functional clusters for shape, texture, and motion encoding in macaque V2",v1,2025-11-01,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1994-25.2026,2026-04-08,67,1.963,3.78,extracted_data/November_2025/10.1101_2025.11.01.686029_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.22.639684_v1,10.1101/2025.02.22.639684,Assessing the impact of artifact correction and artifact rejection on the performance of SVM-based decoding of EEG signals,v1,2025-02-22,Neuroscience,NeuroImage,10.1016/j.neuroimage.2025.121304,2025-08,60,2.074,4.96,extracted_data/February_2025/10.1101_2025.02.22.639684_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.22.634402_v1,10.1101/2025.01.22.634402,Erythropoietin decreases apoptosis and promotes Schwann cell repair and phagocytosis following nerve crush injury in mice,v1,2025-01-22,Neuroscience,Cell Death & Disease,10.1038/s41419-025-07825-4,2025-07-03,35,2.773,9.09,extracted_data/January_2025/10.1101_2025.01.22.634402_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.10.09.676449_v1,10.1101/2025.10.09.676449,Hyperactivity is linked to elevated cortisol levels: comprehensive behavioral analysis in the prenatal valproic acid-induced marmoset model of autism,v1,2025-10-09,Neuroscience,Translational Psychiatry,10.1038/s41398-025-03798-2,2026-01-16,48,2.453,6.10,extracted_data/October_2025/10.1101_2025.10.09.676449_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.09.617414_v1,10.1101/2024.10.09.617414,The representation of stimulus features during stable fixation and active vision,v1,2024-10-09,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1652-24.2024,2025-03-19,67,1.963,3.78,extracted_data/October_2024/10.1101_2024.10.09.617414_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.18.619123_v1,10.1101/2024.10.18.619123,Academic Success and Mental Health: The Paradox of Frontoparietal-Default Mode Network Coupling among Children Facing Poverty,v1,2024-10-18,Neuroscience,Developmental Cognitive Neuroscience,10.1016/j.dcn.2025.101618,2025-12,58,2.094,5.03,extracted_data/October_2024/10.1101_2024.10.18.619123_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.15.648832_v1,10.1101/2025.04.15.648832,Algorithmic dissection of optic flow memory in larval zebrafish,v1,2025-04-15,Neuroscience,Current Biology,10.1016/j.cub.2025.08.047,2025-10,37,2.707,4.50,extracted_data/April_2025/10.1101_2025.04.15.648832_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.19.639189_v2,10.1101/2025.02.19.639189,Brain stimulation preferentially influences long-range projections,v2,2025-02-19,Neuroscience,Science Advances,10.1126/sciadv.adx2106,2025-09-05,19,4.324,12.06,extracted_data/March_2025/10.1101_2025.02.19.639189_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.28.640787_v1,10.1101/2025.02.28.640787,Parietal cortex is recruited by frontal and cingulate areas to support action monitoring and updating during stopping,v1,2025-02-28,Neuroscience,NeuroImage,10.1016/j.neuroimage.2025.121288,2025-07,60,2.074,4.96,extracted_data/March_2025/10.1101_2025.02.28.640787_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.07.637190_v1,10.1101/2025.02.07.637190,DISRUPTION OF TRANSTHALAMIC CIRCUITRY FROM PRIMARY VISUAL CORTEX IMPAIRS VISUAL DISCRIMINATION IN MICE,v1,2025-02-07,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0002-25.2025,2025-04-30,67,1.963,3.78,extracted_data/February_2025/10.1101_2025.02.07.637190_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.21.660846_v1,10.1101/2025.06.21.660846,"Combined Auditory, Tactile, and Visual fMRI Reveals Sensory-Biased and Supramodal Working Memory Regions in Human Frontal Cortex",v1,2025-06-21,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0773-25.2025,2025-09-17,67,1.963,3.78,extracted_data/June_2025/10.1101_2025.06.21.660846_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.11.627894_v1,10.1101/2024.12.11.627894,Deconstruction of a memory engram reveals distinct ensembles recruited at learning,v1,2024-12-11,Neuroscience,Nature Neuroscience,10.1038/s41593-026-02230-2,2026-03-11,2,11.197,12.23,extracted_data/December_2024/10.1101_2024.12.11.627894_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.29.620929_v1,10.1101/2024.10.29.620929,Neural mechanisms underlying robust target selection in response to microstimulation of the oculomotor system,v1,2024-10-29,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.2356-23.2024,2025-01-15,67,1.963,3.78,extracted_data/November_2024/10.1101_2024.10.29.620929_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.26.640427_v1,10.1101/2025.02.26.640427,Müller glial Kir4.1 channel Dysfunction in APOE4-KI model of Alzheimer’s disease,v1,2025-02-26,Neuroscience,Glia,10.1002/glia.70119,2026-03,50,2.317,5.56,extracted_data/March_2025/10.1101_2025.02.26.640427_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.08.622714_v2,10.1101/2024.11.08.622714,The development of aperiodic neural activity in the human brain,v2,2024-11-08,Neuroscience,Nature Human Behaviour,10.1038/s41562-025-02270-x,2025-07-15,12,5.537,10.10,extracted_data/April_2025/10.1101_2024.11.08.622714_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.05.657660_v3,10.1101/2025.06.05.657660,"PP2A methylesterase, PME-1, and PP2A methyltransferase, LCMT-1, control sensitivity to impairments caused by injury-related oligomeric tau",v3,2025-06-05,Neuroscience,Alzheimer's & Dementia,10.1002/alz.70947,2025-12,26,3.600,6.85,extracted_data/November_2025/10.1101_2025.06.05.657660_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.13.643125_v2,10.1101/2025.03.13.643125,Emotional arousal enhances narrative memories through functional integration of large-scale brain networks,v2,2025-03-13,Neuroscience,Nature Human Behaviour,10.1038/s41562-025-02315-1,2025-10-13,12,5.537,10.10,extracted_data/August_2025/10.1101_2025.03.13.643125_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.11.623108_v1,10.1101/2024.11.11.623108,Serum metabolome profiling in patients with mild cognitive impairment reveals sex differences in lipid metabolism,v1,2024-11-11,Neuroscience,Neurobiology of Disease,10.1016/j.nbd.2024.106747,2025-01,64,2.009,5.60,extracted_data/November_2024/10.1101_2024.11.11.623108_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.12.642944_v1,10.1101/2025.03.12.642944,Identifying neuropeptides in Hydra: a custom pipeline reveals a non-amidated regulator of muscle contraction and other new members,v1,2025-03-12,Neuroscience,Open Biology,10.1098/rsob.250073,2025-09,74,1.843,3.60,extracted_data/March_2025/10.1101_2025.03.12.642944_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.28.672852_v1,10.1101/2025.08.28.672852,Endocytome profiling uncovers cell-surface protein dynamics underlying neuronal connectivity,v1,2025-08-28,Neuroscience,Neuron,10.1016/j.neuron.2026.01.027,2026-03,9,6.755,9.96,extracted_data/August_2025/10.1101_2025.08.28.672852_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.06.641642_v2,10.1101/2025.03.06.641642,Visualizing Effective Connectivity in the Human Brain,v2,2025-03-06,Neuroscience,Brain Stimulation,10.1016/j.brs.2025.06.015,2025-07,40,2.666,4.97,extracted_data/March_2025/10.1101_2025.03.06.641642_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.13.668904_v2,10.1101/2025.08.13.668904,Deep Brain Stimulation rescues the homeostasis disruption of circulating D- and L-amino acids level in men with Parkinson’s Disease,v2,2025-08-13,Neuroscience,Neurobiology of Disease,10.1016/j.nbd.2025.107150,2025-11,64,2.009,5.60,extracted_data/October_2025/10.1101_2025.08.13.668904_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.30.635801_v2,10.1101/2025.01.30.635801,Synaptic Targets of Circadian Clock Neurons Influence Core Clock Parameters,v2,2025-01-30,Neuroscience,Science Advances,10.1126/sciadv.adw4666,2025-09-05,19,4.324,12.06,extracted_data/February_2025/10.1101_2025.01.30.635801_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.28.656664_v1,10.1101/2025.05.28.656664,Atypical antipsychotics alter microglial functions via astrocyte-derived extracellular vesicles,v1,2025-05-28,Neuroscience,"Brain, Behavior, and Immunity",10.1016/j.bbi.2025.106132,2026-01,38,2.704,7.42,extracted_data/June_2025/10.1101_2025.05.28.656664_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.02.621669_v1,10.1101/2024.11.02.621669,Impact of prenatal delta-9-tetrahydrocannabinol exposure on mouse brain development: a fetal-to-adulthood magnetic resonance imaging study,v1,2024-11-02,Neuroscience,Molecular Psychiatry,10.1038/s41380-025-03189-5,2026-01,23,4.022,10.52,extracted_data/November_2024/10.1101_2024.11.02.621669_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.27.640537_v1,10.1101/2025.02.27.640537,Growth hormone is required for hippocampal engram cell maturation,v1,2025-02-27,Neuroscience,Science Advances,10.1126/sciadv.aec7836,2025-12-19,19,4.324,12.06,extracted_data/February_2025/10.1101_2025.02.27.640537_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.28.656451_v3,10.1101/2025.05.28.656451,Recovery of retinal terminal fields after traumatic brain injury: evidence of collateral sprouting and sexual dimorphism,v3,2025-05-28,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0792-25.2025,2026-02-04,67,1.963,3.78,extracted_data/October_2025/10.1101_2025.05.28.656451_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.14.623565_v2,10.1101/2024.11.14.623565,A vector calculus for neural computation in the cerebellum,v2,2024-11-14,Neuroscience,Science,10.1126/science.adu6331,2025-05-22,3,10.416,15.26,extracted_data/February_2025/10.1101_2024.11.14.623565_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.04.639748_v2,10.1101/2025.03.04.639748,"Growing Minds, Integrating Senses: Neural and Computational Insights into Age-related Changes in Audio-Visual and Tactile-Visual Learning in Children",v2,2025-03-04,Neuroscience,Developmental Cognitive Neuroscience,10.1016/j.dcn.2025.101622,2025-12,58,2.094,5.03,extracted_data/July_2025/10.1101_2025.03.04.639748_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.10.08.681180_v1,10.1101/2025.10.08.681180,Distinct contributions of anterior and posterior orbitofrontal cortex to outcome-guided behavior,v1,2025-10-08,Neuroscience,Current Biology,10.1016/j.cub.2025.10.007,2025-11,37,2.707,4.50,extracted_data/October_2025/10.1101_2025.10.08.681180_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.06.636899_v1,10.1101/2025.02.06.636899,"Ubiquitin Proteasome System Components, RAD23A and USP13, Modulate TDP-43 Solubility and Neuronal Toxicity",v1,2025-02-06,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0906-25.2025,2026-01-28,67,1.963,3.78,extracted_data/February_2025/10.1101_2025.02.06.636899_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.16.654468_v1,10.1101/2025.05.16.654468,Neural correlates of consciousness in an auditory no-report fMRI study,v1,2025-05-16,Neuroscience,Current Biology,10.1016/j.cub.2025.10.026,2025-12,37,2.707,4.50,extracted_data/May_2025/10.1101_2025.05.16.654468_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.20.633889_v2,10.1101/2025.01.20.633889,Temporal and cell-type specific SPAK-NKCC1 disruption following severe TBI in the developing gyrencephalic brain,v2,2025-01-20,Neuroscience,Acta Neuropathologica Communications,10.1186/s40478-026-02257-3,2026-02-24,44,2.588,5.41,extracted_data/November_2025/10.1101_2025.01.20.633889_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.13.653830_v2,10.1101/2025.05.13.653830,"Evaluation of hippocampal DLGAP2 overexpression on cognition, synaptic function, and dendritic spine structure in a translationally relevant AD mouse model",v2,2025-05-13,Neuroscience,Alzheimer's & Dementia,10.1002/alz.70728,2025-10,26,3.600,6.85,extracted_data/May_2025/10.1101_2025.05.13.653830_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.31.621398_v3,10.1101/2024.10.31.621398,A Bias-Accounting Meta-Analytic Approach Refines and Expands the Cerebellar Behavioral Topography,v3,2024-10-31,Neuroscience,Neuroscience & Biobehavioral Reviews,10.1016/j.neubiorev.2025.106418,2025-12,29,3.076,8.13,extracted_data/June_2025/10.1101_2024.10.31.621398_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.06.631538_v2,10.1101/2025.01.06.631538,"Relating scene memory and perception activity to functional properties, networks, and landmarks of posterior cerebral cortex - a probabilistic atlas",v2,2025-01-06,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0028-25.2025,2025-06-04,67,1.963,3.78,extracted_data/March_2025/10.1101_2025.01.06.631538_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.25.640229_v1,10.1101/2025.02.25.640229,"iPSC-Derived Cerebral Organoids Reveal Mitochondrial, Inflammatory and Neuronal Vulnerabilities in Bipolar Disorder",v1,2025-02-25,Neuroscience,Translational Psychiatry,10.1038/s41398-025-03529-7,2025-08-25,48,2.453,6.10,extracted_data/February_2025/10.1101_2025.02.25.640229_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.06.658257_v1,10.1101/2025.06.06.658257,Defining a functional hierarchy of millisecond time: from visual stimulus processing to duration perception,v1,2025-06-06,Neuroscience,PLOS Biology,10.1371/journal.pbio.3003704,2026-03-26,39,2.691,5.46,extracted_data/June_2025/10.1101_2025.06.06.658257_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.09.19.677136_v2,10.1101/2025.09.19.677136,Optimizing and assessing multichannel TMS focality,v2,2025-09-19,Neuroscience,Brain Stimulation,10.1016/j.brs.2026.103054,2026-03,40,2.666,4.97,extracted_data/February_2026/10.1101_2025.09.19.677136_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.11.622917_v1,10.1101/2024.11.11.622917,"Oscillatory coupling between thalamus, cerebellum and motor cortex in essential tremor",v1,2024-11-11,Neuroscience,Movement Disorders,10.1002/mds.30165,2025-05,31,2.988,5.10,extracted_data/November_2024/10.1101_2024.11.11.622917_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.10.648205_v1,10.1101/2025.04.10.648205,Domain-general neural effects of associative learning and expectations on pain and hedonic taste perception,v1,2025-04-10,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1103-25.2025,2026-01-21,67,1.963,3.78,extracted_data/April_2025/10.1101_2025.04.10.648205_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.10.07.680896_v1,10.1101/2025.10.07.680896,The role of disulfide bonds in the GluN1 subunit in the early trafficking and functional properties of GluN1/GluN2 and GluN1/GluN3 NMDA receptors,v1,2025-10-07,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0409-25.2026,2026-04-01,67,1.963,3.78,extracted_data/October_2025/10.1101_2025.10.07.680896_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.29.620879_v2,10.1101/2024.10.29.620879,The orbitofrontal cortex updates beliefs for state inference,v2,2024-10-29,Neuroscience,Neuron,10.1016/j.neuron.2025.10.024,2026-02,9,6.755,9.96,extracted_data/August_2025/10.1101_2024.10.29.620879_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.07.10.664159_v1,10.1101/2025.07.10.664159,Aberrant medial prefrontal cortex activity and flexible behavior in the TgF344-AD rat model of Alzheimer’s disease,v1,2025-07-10,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1387-25.2026,2026-02-11,67,1.963,3.78,extracted_data/July_2025/10.1101_2025.07.10.664159_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.29.635423_v1,10.1101/2025.01.29.635423,Neuropathological changes in the nucleus basalis of Meynert in people with type 1 or type 2 diabetes mellitus,v1,2025-01-29,Neuroscience,Acta Neuropathologica,10.1007/s00401-025-02942-y,2025-09-29,18,4.483,8.03,extracted_data/January_2025/10.1101_2025.01.29.635423_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.21.619417_v2,10.1101/2024.10.21.619417,Visual objects refine head direction coding,v2,2024-10-21,Neuroscience,Science,10.1126/science.adu9828,2025-09-11,3,10.416,15.26,extracted_data/December_2024/10.1101_2024.10.21.619417_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.22.671841_v2,10.1101/2025.08.22.671841,Dopamine supports reward prediction to shape reward-pursuit strategy,v2,2025-08-22,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1636-25.2026,2026-02-25,67,1.963,3.78,extracted_data/December_2025/10.1101_2025.08.22.671841_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.21.634091_v1,10.1101/2025.01.21.634091,Daily intermittent fasting is an effective multiscale treatment in preclinical models of absence epilepsy,v1,2025-01-21,Neuroscience,Epilepsia,10.1111/epi.18704,2026-02,49,2.371,6.45,extracted_data/January_2025/10.1101_2025.01.21.634091_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.20.655028_v1,10.1101/2025.05.20.655028,Basophils activate splenic B cells and Dendritic cells via IL-13 signaling in acute Traumatic Brain Injury,v1,2025-05-20,Neuroscience,Journal of Neuroinflammation,10.1186/s12974-025-03621-1,2025-12-17,28,3.183,10.01,extracted_data/May_2025/10.1101_2025.05.20.655028_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.20.629841_v1,10.1101/2024.12.20.629841,Dynamics of efficient ensemble coding,v1,2024-12-20,Neuroscience,Cognition,10.1016/j.cognition.2025.106432,2026-06,88,1.686,3.21,extracted_data/January_2025/10.1101_2024.12.20.629841_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.23.671372_v1,10.1101/2025.08.23.671372,Muscle transcriptome profiling reveals novel molecular pathways and biomarkers in laminin-α2 deficient patients,v1,2025-08-23,Neuroscience,Acta Neuropathologica Communications,10.1186/s40478-026-02227-9,2026-02-03,44,2.588,5.41,extracted_data/August_2025/10.1101_2025.08.23.671372_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.17.643763_v1,10.1101/2025.03.17.643763,Mapping energy metabolism systems in the human brain,v1,2025-03-17,Neuroscience,PLOS Biology,10.1371/journal.pbio.3003619,2026-01-30,39,2.691,5.46,extracted_data/March_2025/10.1101_2025.03.17.643763_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.14.648706_v1,10.1101/2025.04.14.648706,Predictive distractor processing relies on integrated proactive and reactive attentional mechanisms,v1,2025-04-14,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0740-25.2025,2026-02-11,67,1.963,3.78,extracted_data/April_2025/10.1101_2025.04.14.648706_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.09.01.673428_v2,10.1101/2025.09.01.673428,Connectome-Based Predictive Modeling of Concurrent and Prospective Substance Use in Adolescence,v2,2025-09-01,Neuroscience,Developmental Cognitive Neuroscience,10.1016/j.dcn.2026.101689,2026-06,58,2.094,5.03,extracted_data/January_2026/10.1101_2025.09.01.673428_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.06.622349_v4,10.1101/2024.11.06.622349,Altered basal forebrain regulation of intrinsic brain networks in depressive and anxiety disorders,v4,2024-11-06,Neuroscience,Nature Mental Health,10.1038/s44220-025-00496-2,2025-09-08,43,2.613,3.82,extracted_data/September_2025/10.1101_2024.11.06.622349_v4.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.28.625915_v1,10.1101/2024.11.28.625915,Characterizing neuronal and population responses to electrical stimulation in the human hippocampo-cortical network,v1,2024-11-28,Neuroscience,Brain Stimulation,10.1016/j.brs.2025.09.010,2025-11,40,2.666,4.97,extracted_data/December_2024/10.1101_2024.11.28.625915_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.17.649286_v2,10.1101/2025.04.17.649286,Respiration shapes the neural dynamics of successful remembering in humans,v2,2025-04-17,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1221-25.2025,2026-01-21,67,1.963,3.78,extracted_data/October_2025/10.1101_2025.04.17.649286_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.15.628593_v1,10.1101/2024.12.15.628593,Adolescent alcohol consumption produces long term alterations in response inhibition and orbitofrontal-striatal activity in a sex-specific manner,v1,2024-12-15,Neuroscience,Developmental Cognitive Neuroscience,10.1016/j.dcn.2025.101552,2025-06,58,2.094,5.03,extracted_data/December_2024/10.1101_2024.12.15.628593_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.26.650765_v1,10.1101/2025.04.26.650765,Single-dose DMT reverses anhedonia and cognitive deficits via restoration of neurogenesis in a stress-induced depression model,v1,2025-04-26,Neuroscience,Translational Psychiatry,10.1038/s41398-026-03852-7,2026-01-29,48,2.453,6.10,extracted_data/May_2025/10.1101_2025.04.26.650765_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.21.639417_v1,10.1101/2025.02.21.639417,Synaptotoxic effects of extracellular tau are mediated by its microtubule-binding region,v1,2025-02-21,Neuroscience,Acta Neuropathologica,10.1007/s00401-025-02897-0,2025-06-02,18,4.483,8.03,extracted_data/February_2025/10.1101_2025.02.21.639417_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.17.628832_v1,10.1101/2024.12.17.628832,Assessment of cortical excitability in awake rhesus macaques with transcranial magnetic stimulation: translational insights from recruitment curves,v1,2024-12-17,Neuroscience,NeuroImage,10.1016/j.neuroimage.2025.121306,2025-08,60,2.074,4.96,extracted_data/December_2024/10.1101_2024.12.17.628832_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.29.626041_v1,10.1101/2024.11.29.626041,Acute restraint stress and pain modulation depend on the interaction between the periaqueductal gray and the lateral septum,v1,2024-11-29,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.2257-24.2025,2025-10-01,67,1.963,3.78,extracted_data/December_2024/10.1101_2024.11.29.626041_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.27.672637_v2,10.1101/2025.08.27.672637,Lifestyle and transcriptional signatures associated with ethnicity/race-related variations in the functional connectome,v2,2025-08-27,Neuroscience,Research,10.34133/research.1143,2026-01-01,52,2.299,10.39,extracted_data/September_2025/10.1101_2025.08.27.672637_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.18.643923_v1,10.1101/2025.03.18.643923,Widely used CaMKII regulatory segment mutations cause tight actinin binding and dendritic spine enlargement in unstimulated neurons,v1,2025-03-18,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0795-25.2025,2025-12-03,67,1.963,3.78,extracted_data/March_2025/10.1101_2025.03.18.643923_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.07.11.664369_v1,10.1101/2025.07.11.664369,Developmental Stage-Dependent Transcriptomic Responses to Neonatal Intraventricular Hemorrhage,v1,2025-07-11,Neuroscience,Journal of Neuroinflammation,10.1186/s12974-025-03599-w,2025-11-28,28,3.183,10.01,extracted_data/July_2025/10.1101_2025.07.11.664369_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.19.671080_v1,10.1101/2025.08.19.671080,White matter microstructure predicts effort and reward sensitivity,v1,2025-08-19,Neuroscience,NeuroImage,10.1016/j.neuroimage.2026.121732,2026-02,60,2.074,4.96,extracted_data/August_2025/10.1101_2025.08.19.671080_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.10.632419_v1,10.1101/2025.01.10.632419,Homeostatic regulation of a motor circuit through temperature sensing rather than activity sensing,v1,2025-01-10,Neuroscience,Current Biology,10.1016/j.cub.2025.03.054,2025-05,37,2.707,4.50,extracted_data/January_2025/10.1101_2025.01.10.632419_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.28.646029_v1,10.1101/2025.03.28.646029,Millisecond-Scale White Matter Dynamics Underlying Visuomotor Integration,v1,2025-03-28,Neuroscience,NeuroImage,10.1016/j.neuroimage.2025.121352,2025-08,60,2.074,4.96,extracted_data/April_2025/10.1101_2025.03.28.646029_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.21.634115_v1,10.1101/2025.01.21.634115,Protective mechanisms against Alzheimer’s Disease in APOE3-Christchurch homozygous astrocytes,v1,2025-01-21,Neuroscience,Alzheimer's & Dementia,10.1002/alz.70589,2025-09,26,3.600,6.85,extracted_data/January_2025/10.1101_2025.01.21.634115_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.25.650619_v1,10.1101/2025.04.25.650619,The Interplay of Bottom-Up Arousal and Attentional Capture during Auditory Scene Analysis: Evidence from Ocular Dynamics,v1,2025-04-25,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0811-25.2025,2026-01-28,67,1.963,3.78,extracted_data/April_2025/10.1101_2025.04.25.650619_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.11.623066_v4,10.1101/2024.11.11.623066,Aquaporin-4 and Caveolin-1 as Mediators of Fibrinogen-Driven Cerebrovascular Pathology in Cerebral Amyloid Angiopathy,v4,2024-11-11,Neuroscience,Alzheimer's & Dementia,10.1002/alz.71030,2026-01,26,3.600,6.85,extracted_data/July_2025/10.1101_2024.11.11.623066_v4.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.17.638688_v3,10.1101/2025.02.17.638688,Retinal tau phosphorylation in Alzheimer’s disease: a mass spectrometry study,v3,2025-02-17,Neuroscience,Neurobiology of Disease,10.1016/j.nbd.2025.107057,2025-10,64,2.009,5.60,extracted_data/June_2025/10.1101_2025.02.17.638688_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.09.642133_v2,10.1101/2025.03.09.642133,High throughput identification of genetic regulators of microglial inflammatory processes in Alzheimer’s disease,v2,2025-03-09,Neuroscience,Journal of Neuroinflammation,10.1186/s12974-025-03562-9,2025-12-03,28,3.183,10.01,extracted_data/March_2025/10.1101_2025.03.09.642133_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.25.640024_v1,10.1101/2025.02.25.640024,Unraveling the Neurocognitive Mechanisms of Delayed Punishment in Second-and Third-Party Contexts,v1,2025-02-25,Neuroscience,NeuroImage,10.1016/j.neuroimage.2025.121574,2025-12,60,2.074,4.96,extracted_data/February_2025/10.1101_2025.02.25.640024_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.26.630368_v2,10.1101/2024.12.26.630368,Hippocampal sharp-wave ripples decrease during physical actions including consummatory behavior in immobile rodents,v2,2024-12-26,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0080-25.2025,2025-06-18,67,1.963,3.78,extracted_data/January_2025/10.1101_2024.12.26.630368_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.07.02.662743_v1,10.1101/2025.07.02.662743,Characterization of mice with cell type-specific Gnal loss of function provides insights on GNAL-linked dystonia,v1,2025-07-02,Neuroscience,Neurobiology of Disease,10.1016/j.nbd.2025.107071,2025-10,64,2.009,5.60,extracted_data/July_2025/10.1101_2025.07.02.662743_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.28.620689_v3,10.1101/2024.10.28.620689,Catecholamines reduce choice history biases in perceptual decision making,v3,2024-10-28,Neuroscience,PLOS Biology,10.1371/journal.pbio.3003361,2025-09-03,39,2.691,5.46,extracted_data/August_2025/10.1101_2024.10.28.620689_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.07.21.665563_v1,10.1101/2025.07.21.665563,Nerve injury promotes glial immune responses through a Draper/Ninjurin A pathway,v1,2025-07-21,Neuroscience,Neurobiology of Disease,10.1016/j.nbd.2025.107242,2026-01,64,2.009,5.60,extracted_data/July_2025/10.1101_2025.07.21.665563_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.11.659019_v1,10.1101/2025.06.11.659019,"Long-term Nrf2-driven microglial repopulation mitigates microgliosis, neuronal loss and cognitive deficits in tauopathy",v1,2025-06-11,Neuroscience,"Brain, Behavior, and Immunity",10.1016/j.bbi.2026.106253,2026-03,38,2.704,7.42,extracted_data/June_2025/10.1101_2025.06.11.659019_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.09.658381_v2,10.1101/2025.06.09.658381,Drosophila learn to prefer immobile spherical objects through repeated physical interaction,v2,2025-06-09,Neuroscience,Current Biology,10.1016/j.cub.2025.09.073,2025-11,37,2.707,4.50,extracted_data/August_2025/10.1101_2025.06.09.658381_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.28.656268_v1,10.1101/2025.05.28.656268,Four-dimensional neural space for moral inference,v1,2025-05-28,Neuroscience,NeuroImage,10.1016/j.neuroimage.2026.121724,2026-02,60,2.074,4.96,extracted_data/June_2025/10.1101_2025.05.28.656268_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.25.640090_v1,10.1101/2025.02.25.640090,Within-Individual Precision Mapping of Brain Networks Exclusively Using Task Data,v1,2025-02-25,Neuroscience,Neuron,10.1016/j.neuron.2025.08.029,2025-12,9,6.755,9.96,extracted_data/February_2025/10.1101_2025.02.25.640090_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.09.653000_v5,10.1101/2025.05.09.653000,"Introducing PIGMO, a novel PIGmented MOuse model of Parkinson’s disease (V1)",v5,2025-05-09,Neuroscience,npj Parkinson's Disease,10.1038/s41531-026-01289-9,2026-02-11,32,2.914,7.79,extracted_data/November_2025/10.1101_2025.05.09.653000_v5.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.11.04.621932_v2,10.1101/2024.11.04.621932,Healing of ischemic injury in the retina,v2,2024-11-04,Neuroscience,Science Advances,10.1126/sciadv.adx7204,2026-01-23,19,4.324,12.06,extracted_data/March_2025/10.1101_2024.11.04.621932_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.30.630694_v3,10.1101/2024.12.30.630694,Mitochondrial Complex I and ROS control neuromuscular function through opposing pre- and postsynaptic mechanisms,v3,2024-12-30,Neuroscience,PLOS Biology,10.1371/journal.pbio.3003388,2025-09-22,39,2.691,5.46,extracted_data/August_2025/10.1101_2024.12.30.630694_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.01.646597_v2,10.1101/2025.04.01.646597,Neural Tracking of the Maternal Voice in the Infant Brain,v2,2025-04-01,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0646-25.2025,2025-12-10,67,1.963,3.78,extracted_data/August_2025/10.1101_2025.04.01.646597_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.16.633314_v1,10.1101/2025.01.16.633314,Detection of alpha synuclein seeding activity in tear fluid in patients with Parkinson’s disease,v1,2025-01-16,Neuroscience,npj Parkinson's Disease,10.1038/s41531-026-01282-2,2026-02-18,32,2.914,7.79,extracted_data/January_2025/10.1101_2025.01.16.633314_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.18.660330_v4,10.1101/2025.06.18.660330,Temporal predictions as motor readouts of sensory predictions,v4,2025-06-18,Neuroscience,Current Biology,10.1016/j.cub.2026.02.005,2026-03,37,2.707,4.50,extracted_data/January_2026/10.1101_2025.06.18.660330_v4.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.10.02.680043_v1,10.1101/2025.10.02.680043,Dim light at night impacts circadian rhythms and Alzheimer’s disease-like neuroinflammation and neuropathology in humanized APP SAA knock-in mice,v1,2025-10-02,Neuroscience,SLEEP,10.1093/sleep/zsag041,2026-02-20,77,1.796,3.57,extracted_data/October_2025/10.1101_2025.10.02.680043_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.19.642045_v1,10.1101/2025.03.19.642045,Parameter optimisation for mitigating somatosensory confounds during transcranial ultrasonic stimulation,v1,2025-03-19,Neuroscience,Brain Stimulation,10.1016/j.brs.2025.06.009,2025-07,40,2.666,4.97,extracted_data/March_2025/10.1101_2025.03.19.642045_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.19.639016_v1,10.1101/2025.02.19.639016,Human newborns form musical predictions based on rhythmic but not melodic structure,v1,2025-02-19,Neuroscience,PLOS Biology,10.1371/journal.pbio.3003600,2026-02-05,39,2.691,5.46,extracted_data/February_2025/10.1101_2025.02.19.639016_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.20.629848_v1,10.1101/2024.12.20.629848,Dynamic Grouping of Ongoing Activity in V1 Hypercolumns,v1,2024-12-20,Neuroscience,NeuroImage,10.1016/j.neuroimage.2025.121157,2025-04,60,2.074,4.96,extracted_data/January_2025/10.1101_2024.12.20.629848_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.07.652771_v1,10.1101/2025.05.07.652771,The contribution of the locus coeruleus – norepinephrine system to the coupling between pupil-linked arousal and cortical state,v1,2025-05-07,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0898-25.2025,2026-01-21,67,1.963,3.78,extracted_data/May_2025/10.1101_2025.05.07.652771_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.04.01.646403_v2,10.1101/2025.04.01.646403,"Too little and too much: balanced hippocampal, but not medial prefrontal, neural activity is required for intact novel object recognition in rats",v2,2025-04-01,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1141-25.2025,2025-12-10,67,1.963,3.78,extracted_data/June_2025/10.1101_2025.04.01.646403_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.01.08.631956_v2,10.1101/2025.01.08.631956,Regenerative failure of sympathetic axons contributes to deficits in functional recovery after nerve injury,v2,2025-01-08,Neuroscience,Neurobiology of Disease,10.1016/j.nbd.2025.106893,2025-06,64,2.009,5.60,extracted_data/January_2025/10.1101_2025.01.08.631956_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.07.23.666206_v2,10.1101/2025.07.23.666206,Visual Word Form Area demonstrates individual and task-agnostic consistency but inter-individual variability,v2,2025-07-23,Neuroscience,Developmental Cognitive Neuroscience,10.1016/j.dcn.2026.101703,2026-06,58,2.094,5.03,extracted_data/January_2026/10.1101_2025.07.23.666206_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.20.619325_v1,10.1101/2024.10.20.619325,Dorsal-caudal and ventral hippocampus target different cell populations in the medial frontal cortex in rodents,v1,2024-10-20,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.0217-25.2025,2025-05-28,67,1.963,3.78,extracted_data/October_2024/10.1101_2024.10.20.619325_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.18.643795_v1,10.1101/2025.03.18.643795,"Meditation induces shifts in neural oscillations, brain complexity and critical dynamics: Novel insights from MEG",v1,2025-03-18,Neuroscience,Neuroscience of Consciousness,10.1093/nc/niaf047,2025-02-06,82,1.750,4.18,extracted_data/March_2025/10.1101_2025.03.18.643795_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.28.656559_v1,10.1101/2025.05.28.656559,A Movement-Independent Signature of Urgency During Human Perceptual Decision Making,v1,2025-05-28,Neuroscience,The Journal of Neuroscience,10.1523/JNEUROSCI.1445-25.2025,2026-03-11,67,1.963,3.78,extracted_data/June_2025/10.1101_2025.05.28.656559_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.03.657690_v1,10.1101/2025.06.03.657690,Stochastic Misfolding Drives the Emergence of Distinct α-Synuclein Strains,v1,2025-06-03,Neuroscience,Neuron,10.1016/j.neuron.2026.01.014,2026-02,9,6.755,9.96,extracted_data/June_2025/10.1101_2025.06.03.657690_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.06.24.661361_v4,10.1101/2025.06.24.661361,Oscillatory Control of Cortical Space as a Computational Dimension,v4,2025-06-24,Neuroscience,Current Biology,10.1016/j.cub.2025.11.072,2026-01,37,2.707,4.50,extracted_data/December_2025/10.1101_2025.06.24.661361_v4.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.09.11.675537_v1,10.1101/2025.09.11.675537,p75 Neurotrophin Receptor Shapes the Dynamics of Adult Hippocampal Neurogenesis in Alzheimer’s Disease,v1,2025-09-11,Neuroscience,Alzheimer's Research & Therapy,10.1186/s13195-026-01989-7,2026-02-20,36,2.709,7.32,extracted_data/September_2025/10.1101_2025.09.11.675537_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.30.656911_v3,10.1101/2025.05.30.656911,Investigating milk-derived extracellular vesicles as mediators of maternal stress and environmental intervention,v3,2025-05-30,Neuroscience,Molecular Psychiatry,10.1038/s41380-025-03346-w,2026-04,23,4.022,10.52,extracted_data/October_2025/10.1101_2025.05.30.656911_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.05.28.656560_v1,10.1101/2025.05.28.656560,EEG reveals how space acts as a late heuristic of time,v1,2025-05-28,Neuroscience,NeuroImage,10.1016/j.neuroimage.2026.121710,2026-02,60,2.074,4.96,extracted_data/June_2025/10.1101_2025.05.28.656560_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.07.641428_v1,10.1101/2025.03.07.641428,Dynamic Causal Tractography Analysis of Auditory Descriptive Naming: An Intracranial Study of 106 Patients,v1,2025-03-07,Neuroscience,NeuroImage,10.1016/j.neuroimage.2025.121319,2025-08,60,2.074,4.96,extracted_data/March_2025/10.1101_2025.03.07.641428_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.09.617466_v2,10.1101/2024.10.09.617466,Reward-driven cerebellar climbing fiber activity influences both neural and behavioral learning,v2,2024-10-09,Neuroscience,Current Biology,10.1016/j.cub.2025.07.064,2025-09,37,2.707,4.50,extracted_data/July_2025/10.1101_2024.10.09.617466_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.22.670964_v1,10.1101/2025.08.22.670964,ARP2/3 complex mediates the neuropathology of PTEN-deficient human neural cells downstream of mTORC1 and mTORC2 hyperactivation,v1,2025-08-22,Neuroscience,Proceedings of the National Academy of Sciences,10.1073/pnas.2523367123,2026-02-17,6,3.414,7.85,extracted_data/August_2025/10.1101_2025.08.22.670964_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.02.23.639736_v1,10.1101/2025.02.23.639736,Distinct prelimbic cortex ensembles encode response execution and inhibition,v1,2025-02-23,Neuroscience,Proceedings of the National Academy of Sciences,10.1073/pnas.2505378122,2025-09-16,6,3.414,7.85,extracted_data/February_2025/10.1101_2025.02.23.639736_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.03.07.642102_v3,10.1101/2025.03.07.642102,Visual adaptation stronger at horizontal than vertical meridian: Linking performance with V1 cortical surface area,v3,2025-03-07,Neuroscience,Proceedings of the National Academy of Sciences,10.1073/pnas.2507810122,2025-07-22,6,3.414,7.85,extracted_data/May_2025/10.1101_2025.03.07.642102_v3.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.04.616651_v1,10.1101/2024.10.04.616651,Motor Imagery Enhances Performance Beyond the Imagined Action,v1,2024-10-04,Neuroscience,Proceedings of the National Academy of Sciences,10.1073/pnas.2423642122,2025-05-20,6,3.414,7.85,extracted_data/October_2024/10.1101_2024.10.04.616651_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.12.20.629801_v2,10.1101/2024.12.20.629801,Neural representation of the decisional reference point in monkeys,v2,2024-12-20,Neuroscience,Proceedings of the National Academy of Sciences,10.1073/pnas.2514110122,2025-12-02,6,3.414,7.85,extracted_data/October_2025/10.1101_2024.12.20.629801_v2.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2024.10.23.619408_v1,10.1101/2024.10.23.619408,40 Hz sensory stimulation enhances CA3-CA1 coordination and prospective coding during navigation in a mouse model of Alzheimer’s disease,v1,2024-10-23,Neuroscience,Proceedings of the National Academy of Sciences,10.1073/pnas.2419364122,2025-04-29,6,3.414,7.85,extracted_data/October_2024/10.1101_2024.10.23.619408_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.19.671144_v1,10.1101/2025.08.19.671144,Neuromodulator control of energy reserves in dopaminergic neurons,v1,2025-08-19,Neuroscience,Proceedings of the National Academy of Sciences,10.1073/pnas.2523019122,2025-12-16,6,3.414,7.85,extracted_data/August_2025/10.1101_2025.08.19.671144_v1.xml,top100_neuro_multi_journals.csv
neuro_200,10.1101_2025.08.10.669034_v1,10.1101/2025.08.10.669034,Online supervised learning of temporal patterns in biological neural networks under feedback control,v1,2025-08-10,Neuroscience,Proceedings of the National Academy of Sciences,10.1073/pnas.2521560123,2026-03-17,6,3.414,7.85,extracted_data/August_2025/10.1101_2025.08.10.669034_v1.xml,top100_neuro_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.10.617594_v1,10.1101/2024.10.10.617594,Reverse engineering of the pattern recognition receptor FLS2 reveals key design principles of broader recognition spectra against evading flg22 epitopes,v1,2024-10-10,Plant Biology,Nature Plants,10.1038/s41477-025-02050-5,2025-07-28,12,4.815,6.52,extracted_data/October_2024/10.1101_2024.10.10.617594_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.16.618214_v1,10.1101/2024.10.16.618214,Alternatives to photorespiration: A systems-level analysis reveals mechanisms of enhanced plant productivity,v1,2024-10-16,Plant Biology,Science Advances,10.1126/sciadv.adt9287,2025-03-28,17,4.324,12.06,extracted_data/October_2024/10.1101_2024.10.16.618214_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.16.618759_v1,10.1101/2024.10.16.618759,Jasmonic acid signaling and glutathione coordinate plant recovery from high light stress,v1,2024-10-16,Plant Biology,Plant Physiology,10.1093/plphys/kiaf143,2025-03-28,74,2.162,5.93,extracted_data/October_2024/10.1101_2024.10.16.618759_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.18.619122_v2,10.1101/2024.10.18.619122,NUDIX Hydrolases Target Specific Inositol Pyrophosphates and Regulate Phosphate Homeostasis and Bacterial Pathogen Susceptibility in Arabidopsis,v2,2024-10-18,Plant Biology,Journal of Integrative Plant Biology,10.1111/jipb.70060,2025-12,31,3.455,9.19,extracted_data/August_2025/10.1101_2024.10.18.619122_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.21.618687_v1,10.1101/2024.10.21.618687,Ectomycorrhizal symbiosis evolved independently and by convergent gene duplication in rosid lineages,v1,2024-10-21,Plant Biology,New Phytologist,10.1111/nph.70054,2025-05,36,3.293,8.18,extracted_data/October_2024/10.1101_2024.10.21.618687_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.21.619347_v2,10.1101/2024.10.21.619347,COmapper: High-resolution mapping of meiotic crossovers by long-read sequencing in Arabidopsis,v2,2024-10-21,Plant Biology,New Phytologist,10.1111/nph.70304,2025-08,36,3.293,8.18,extracted_data/May_2025/10.1101_2024.10.21.619347_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.22.619524_v2,10.1101/2024.10.22.619524,"Loss of Tonoplast Sucrose Transporter SUT4 Alters Seasonal Growth, Carbohydrate Allocation, and Fertility in Field-Grown Poplar",v2,2024-10-22,Plant Biology,The Plant Journal,10.1111/tpj.70554,2025-11,69,2.275,6.19,extracted_data/August_2025/10.1101_2024.10.22.619524_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.23.619678_v1,10.1101/2024.10.23.619678,"Root Remodeling Mechanisms and Salt Tolerance Trade-Offs: The Roles of HKT1, TMAC2, and TIP2;2 in Arabidopsis",v1,2024-10-23,Plant Biology,PLOS Genetics,10.1371/journal.pgen.1011713,2025-06-11,92,1.945,3.48,extracted_data/October_2024/10.1101_2024.10.23.619678_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.23.619823_v2,10.1101/2024.10.23.619823,Auxin-salicylic acid seesaw regulates the age-dependent balance between plant growth and herbivore defense,v2,2024-10-23,Plant Biology,Science Advances,10.1126/sciadv.adu5141,2025-05-09,17,4.324,12.06,extracted_data/November_2024/10.1101_2024.10.23.619823_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.25.620298_v1,10.1101/2024.10.25.620298,Regulation of Crassulacean Acid Metabolism at the protein level in the CAM plant Kalanchoë laxiflora,v1,2024-10-25,Plant Biology,Plant Physiology,10.1093/plphys/kiaf095,2025-03-28,74,2.162,5.93,extracted_data/October_2024/10.1101_2024.10.25.620298_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.25.620361_v1,10.1101/2024.10.25.620361,Association of the benzoxazinoid pathway with boron homeostasis in maize,v1,2024-10-25,Plant Biology,Plant Physiology,10.1093/plphys/kiae611,2024-12-23,74,2.162,5.93,extracted_data/November_2024/10.1101_2024.10.25.620361_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.26.620444_v1,10.1101/2024.10.26.620444,Light activates psbA translation in plants by relieving inhibition of translation factor HCF173 by the psbA ORF in cis,v1,2024-10-26,Plant Biology,The Plant Cell,10.1093/plcell/koaf047,2025-04-02,27,3.704,7.98,extracted_data/October_2024/10.1101_2024.10.26.620444_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.28.620663_v1,10.1101/2024.10.28.620663,TILLCANN: A TILLING platform in Cannabis sativa for mutation discovery and crop improvement,v1,2024-10-28,Plant Biology,Molecular Horticulture,10.1186/s43897-025-00176-w,2025-10-13,78,2.129,6.77,extracted_data/November_2024/10.1101_2024.10.28.620663_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.30.620956_v1,10.1101/2024.10.30.620956,Regulation of heterosis-associated gene expression complementation in maize hybrids,v1,2024-10-30,Plant Biology,Genome Biology,10.1186/s13059-025-03768-3,2025-09-22,9,5.710,9.04,extracted_data/November_2024/10.1101_2024.10.30.620956_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.31.621270_v1,10.1101/2024.10.31.621270,"Four ZIPs contribute to Zn, Fe, Cu and Mn acquisition at the outer root domain",v1,2024-10-31,Plant Biology,PLOS Genetics,10.1371/journal.pgen.1011796,2025-07-15,92,1.945,3.48,extracted_data/November_2024/10.1101_2024.10.31.621270_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.31.621406_v1,10.1101/2024.10.31.621406,Subcellular plant carbohydrate metabolism under elevated temperature,v1,2024-10-31,Plant Biology,Plant Physiology,10.1093/plphys/kiaf117,2025-07-03,74,2.162,5.93,extracted_data/November_2024/10.1101_2024.10.31.621406_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.10.31.621407_v1,10.1101/2024.10.31.621407,Many transcription factor families have evolutionarily conserved binding motifs in plants,v1,2024-10-31,Plant Biology,Plant Physiology,10.1093/plphys/kiaf205,2025-05-30,74,2.162,5.93,extracted_data/November_2024/10.1101_2024.10.31.621407_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.01.621578_v2,10.1101/2024.11.01.621578,Isoprene deters insect herbivory by priming plant hormone responses,v2,2024-11-01,Plant Biology,Science Advances,10.1126/sciadv.adu4637,2025-04-18,17,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.01.621578_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.03.621459_v4,10.1101/2024.11.03.621459,Structural variations contribute to subspeciation and yield heterosis in rice,v4,2024-11-03,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70484,2025-12-03,42,2.907,9.68,extracted_data/September_2025/10.1101_2024.11.03.621459_v4.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.04.621941_v1,10.1101/2024.11.04.621941,Aging drives a program of DNA methylation decay in plant organs,v1,2024-11-04,Plant Biology,Science,10.1126/science.adu2392,2026-01-29,3,10.416,15.26,extracted_data/November_2024/10.1101_2024.11.04.621941_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.04.621969_v1,10.1101/2024.11.04.621969,"Tomato roots exhibit distinct, development-specific responses to bacterial-derived peptides",v1,2024-11-04,Plant Biology,"Plant, Cell & Environment",10.1111/pce.70164,2025-12,76,2.150,7.07,extracted_data/November_2024/10.1101_2024.11.04.621969_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.06.622292_v1,10.1101/2024.11.06.622292,Efficient and Versatile Rapeseed Transformation for New Breeding Technologies,v1,2024-11-06,Plant Biology,The Plant Journal,10.1111/tpj.70330,2025-07,69,2.275,6.19,extracted_data/November_2024/10.1101_2024.11.06.622292_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.06.622352_v1,10.1101/2024.11.06.622352,The circadian clock regulates receptor-mediated immune responses to an herbivore-associated molecular pattern,v1,2024-11-06,Plant Biology,"Plant, Cell & Environment",10.1111/pce.70223,2025-10-23,76,2.150,7.07,extracted_data/November_2024/10.1101_2024.11.06.622352_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.07.622452_v2,10.1101/2024.11.07.622452,From aerial drone to QTL: Leveraging next-generation phenotyping to reveal the genetics of color and height in field-grown Lactuca sativa,v2,2024-11-07,Plant Biology,The Plant Journal,10.1111/tpj.70405,2025-08,69,2.275,6.19,extracted_data/February_2025/10.1101_2024.11.07.622452_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.07.622526_v2,10.1101/2024.11.07.622526,Jasmonate Primes Plant Responses to Extracellular ATP,v2,2024-11-07,Plant Biology,The Plant Journal,10.1111/tpj.70514,2025-10,69,2.275,6.19,extracted_data/August_2025/10.1101_2024.11.07.622526_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.13.623477_v3,10.1101/2024.11.13.623477,Characterization of FLOWERING LOCUS T related genes and their putative gene regulatory network in semi-winter Brassica napus cultivar Zhongshaung11,v3,2024-11-13,Plant Biology,The Plant Journal,10.1111/tpj.70443,2025-08,69,2.275,6.19,extracted_data/June_2025/10.1101_2024.11.13.623477_v3.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.14.623649_v3,10.1101/2024.11.14.623649,Leaf size determines damage- and herbivore-induced volatile emissions in maize,v3,2024-11-14,Plant Biology,"Plant, Cell & Environment",10.1111/pce.15355,2025-05,76,2.150,7.07,extracted_data/January_2025/10.1101_2024.11.14.623649_v3.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.18.623787_v3,10.1101/2024.11.18.623787,In silico analysis of the evolution of root phenotypes during maize domestication in Neolithic soils of Tehuacán,v3,2024-11-18,Plant Biology,New Phytologist,10.1111/nph.70245,2025-10,36,3.293,8.18,extracted_data/January_2025/10.1101_2024.11.18.623787_v3.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.19.624325_v2,10.1101/2024.11.19.624325,Barley resistance and susceptibility to fungal cell entry involve the interplay of ROP signaling with phosphatidylinositol-monophosphates,v2,2024-11-19,Plant Biology,The Plant Journal,10.1111/tpj.70356,2025-07,69,2.275,6.19,extracted_data/July_2025/10.1101_2024.11.19.624325_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.20.624400_v1,10.1101/2024.11.20.624400,Aphid effectors suppress plant immunity via recruiting defence proteins to processing bodies,v1,2024-11-20,Plant Biology,Science Advances,10.1126/sciadv.adv1447,2025-07-18,17,4.324,12.06,extracted_data/November_2024/10.1101_2024.11.20.624400_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.24.625038_v2,10.1101/2024.11.24.625038,Integrating Load-Cell Lysimetry and Machine Learning for Prediction of Daily Plant Transpiration,v2,2024-11-24,Plant Biology,"Plant, Cell & Environment",10.1111/pce.70222,2026-01,76,2.150,7.07,extracted_data/July_2025/10.1101_2024.11.24.625038_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.27.625495_v1,10.1101/2024.11.27.625495,Modulating activity of the APC/C regulator SISAMBA improves the sugar and antioxidant content of tomato fruits,v1,2024-11-27,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70149,2025-09,42,2.907,9.68,extracted_data/December_2024/10.1101_2024.11.27.625495_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.11.27.625718_v1,10.1101/2024.11.27.625718,Light quantity impacts early response to cold and cold acclimation in young leaves of Arabidopsis,v1,2024-11-27,Plant Biology,"Plant, Cell & Environment",10.1111/pce.15481,2025-07,76,2.150,7.07,extracted_data/December_2024/10.1101_2024.11.27.625718_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.04.626797_v1,10.1101/2024.12.04.626797,At-RS31 orchestrates hierarchical cross-regulation of splicing factors and integrates alternative splicing with TOR-ABA pathways,v1,2024-12-04,Plant Biology,New Phytologist,10.1111/nph.70221,2025-07,36,3.293,8.18,extracted_data/December_2024/10.1101_2024.12.04.626797_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.08.627150_v1,10.1101/2024.12.08.627150,Single-cell mass spectrometry reveals heterogeneous triterpenic acid accumulation in apple callus-derived cells,v1,2024-12-08,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70174,2025-08,42,2.907,9.68,extracted_data/December_2024/10.1101_2024.12.08.627150_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.08.627391_v1,10.1101/2024.12.08.627391,Chitin soil amendment triggers systemic plant disease resistance through enhanced pattern-triggered immunity,v1,2024-12-08,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70282,2025-11,42,2.907,9.68,extracted_data/December_2024/10.1101_2024.12.08.627391_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.10.627212_v1,10.1101/2024.12.10.627212,Cytoplasmic calcium influx mediated by Lr14a regulates stomatal immunity against leaf rust in wheat,v1,2024-12-10,Plant Biology,Current Biology,10.1016/j.cub.2025.10.033,2025-12,48,2.707,4.50,extracted_data/December_2024/10.1101_2024.12.10.627212_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.10.627739_v2,10.1101/2024.12.10.627739,Computational metabolomics reveals overlooked chemodiversity of alkaloid scaffolds in Piper fimbriulatum,v2,2024-12-10,Plant Biology,The Plant Journal,10.1111/tpj.70086,2025-03,69,2.275,6.19,extracted_data/February_2025/10.1101_2024.12.10.627739_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.10.627817_v1,10.1101/2024.12.10.627817,"Jan and mini-Jan, a model system for potato functional genomics",v1,2024-12-10,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.14582,2025-04,42,2.907,9.68,extracted_data/December_2024/10.1101_2024.12.10.627817_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.12.628249_v1,10.1101/2024.12.12.628249,Genes and pathways determining flowering time variation in temperate adapted sorghum,v1,2024-12-12,Plant Biology,The Plant Journal,10.1111/tpj.70250,2025-06,69,2.275,6.19,extracted_data/December_2024/10.1101_2024.12.12.628249_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.18.628695_v1,10.1101/2024.12.18.628695,A haplotype-based evolutionary history of barley domestication,v1,2024-12-18,Plant Biology,Nature,10.1038/s41586-025-09533-7,2025-11-20,1,18.288,18.47,extracted_data/January_2025/10.1101_2024.12.18.628695_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.19.629334_v1,10.1101/2024.12.19.629334,Warm temperature modifies cell fates to reduce stomata production in Arabidopsis,v1,2024-12-19,Plant Biology,New Phytologist,10.1111/nph.70396,2025-10,36,3.293,8.18,extracted_data/December_2024/10.1101_2024.12.19.629334_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.19.629411_v1,10.1101/2024.12.19.629411,Spatial Transcriptomics Reveals Expression Gradients in Developing Wheat Inflorescences at Cellular Resolution,v1,2024-12-19,Plant Biology,The Plant Cell,10.1093/plcell/koaf282,2026-01-02,27,3.704,7.98,extracted_data/January_2025/10.1101_2024.12.19.629411_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.20.628945_v1,10.1101/2024.12.20.628945,Application of a GRF-GIF chimera enhances plant regeneration for genome editing in tomato,v1,2024-12-20,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70212,2025-09,42,2.907,9.68,extracted_data/December_2024/10.1101_2024.12.20.628945_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.20.629831_v2,10.1101/2024.12.20.629831,A simple method to efficiently generate structural variation in plants,v2,2024-12-20,Plant Biology,PLOS Genetics,10.1371/journal.pgen.1011977,2025-12-18,92,1.945,3.48,extracted_data/May_2025/10.1101_2024.12.20.629831_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.23.630054_v2,10.1101/2024.12.23.630054,Sporophyte Directed Gametogenesis via the Ubiquitin Proteasome System,v2,2024-12-23,Plant Biology,Nature Plants,10.1038/s41477-025-01932-y,2025-03-14,12,4.815,6.52,extracted_data/December_2024/10.1101_2024.12.23.630054_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.25.630128_v2,10.1101/2024.12.25.630128,A compendium of nonredundant short Polymerase III promoters for CRISPR applications,v2,2024-12-25,Plant Biology,Plant Physiology,10.1093/plphys/kiaf294,2025-07-03,74,2.162,5.93,extracted_data/July_2025/10.1101_2024.12.25.630128_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2024.12.31.630900_v1,10.1101/2024.12.31.630900,Protection of photosynthesis by UVR8 and cryptochromes in Arabidopsis under blue and UV radiation,v1,2024-12-31,Plant Biology,"Plant, Cell & Environment",10.1111/pce.15608,2025-08,76,2.150,7.07,extracted_data/January_2025/10.1101_2024.12.31.630900_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.06.631554_v1,10.1101/2025.01.06.631554,The Ralstonia solanacearum effector RipAV targets Plant U-box proteins and induces proteasomal-dependent degradation of BIK1,v1,2025-01-06,Plant Biology,New Phytologist,10.1111/nph.70511,2025-11,36,3.293,8.18,extracted_data/January_2025/10.1101_2025.01.06.631554_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.07.631641_v1,10.1101/2025.01.07.631641,Higher adaxial stomatal density is associated with lower grain yield in spring wheat,v1,2025-01-07,Plant Biology,New Phytologist,10.1111/nph.70416,2025-10,36,3.293,8.18,extracted_data/January_2025/10.1101_2025.01.07.631641_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.07.631665_v1,10.1101/2025.01.07.631665,Polyploid - diploid coexistence in the greater duckweed Spirodela polyrhiza,v1,2025-01-07,Plant Biology,Journal of Ecology,10.1111/1365-2745.70096,2025-09,61,2.422,5.89,extracted_data/January_2025/10.1101_2025.01.07.631665_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.07.631775_v1,10.1101/2025.01.07.631775,Ustilaginoidea virens suppresses floral immunity through promoting GA biosynthesis by the effector SCRE9,v1,2025-01-07,Plant Biology,New Phytologist,10.1111/nph.70414,2025-12,36,3.293,8.18,extracted_data/January_2025/10.1101_2025.01.07.631775_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.08.631880_v2,10.1101/2025.01.08.631880,"Revisiting the Central Dogma: the distinct roles of genome, methylation, transcription, and translation on protein expression in Arabidopsis thaliana",v2,2025-01-08,Plant Biology,Genome Biology,10.1186/s13059-025-03741-0,2025-09-29,9,5.710,9.04,extracted_data/April_2025/10.1101_2025.01.08.631880_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.09.632110_v1,10.1101/2025.01.09.632110,Identification of INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 2 (IPCS2) as a new rate-limiting component in Arabidopsis pathogen entry control,v1,2025-01-09,Plant Biology,The Plant Journal,10.1111/tpj.70159,2025-04,69,2.275,6.19,extracted_data/January_2025/10.1101_2025.01.09.632110_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.09.632158_v2,10.1101/2025.01.09.632158,Cold hardiness dynamics predict budbreak and associated low temperature threats in grapevine,v2,2025-01-09,Plant Biology,New Phytologist,10.1111/nph.71074,2026-03-08,36,3.293,8.18,extracted_data/December_2025/10.1101_2025.01.09.632158_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.09.632189_v2,10.1101/2025.01.09.632189,TOC1 phosphorylation disproportionally enhances chromatin binding at rhythmic gene promoters,v2,2025-01-09,Plant Biology,Science Advances,10.1126/sciadv.adx7804,2025-09-26,17,4.324,12.06,extracted_data/March_2025/10.1101_2025.01.09.632189_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.17.633535_v1,10.1101/2025.01.17.633535,Future heatwave conditions inhibit CO2-induced stomatal closure in wheat,v1,2025-01-17,Plant Biology,New Phytologist,10.1111/nph.70722,2026-02,36,3.293,8.18,extracted_data/January_2025/10.1101_2025.01.17.633535_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.22.634289_v2,10.1101/2025.01.22.634289,"Integrative spatial transcriptomic analysis pinpoints the role of the ferroxidase, TaMCO3, in wheat root tip iron mobilization",v2,2025-01-22,Plant Biology,The Plant Journal,10.1111/tpj.70188,2025-04,69,2.275,6.19,extracted_data/April_2025/10.1101_2025.01.22.634289_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.24.634664_v2,10.1101/2025.01.24.634664,The receptor-like kinases BIR1 and BIR3 modulate antiviral resistance by different mechanisms,v2,2025-01-24,Plant Biology,New Phytologist,10.1111/nph.70216,2025-07,36,3.293,8.18,extracted_data/February_2025/10.1101_2025.01.24.634664_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.26.633040_v1,10.1101/2025.01.26.633040,A highly efficient CRISPR-Cas9-based gene editing system in oat (Avena sativa),v1,2025-01-26,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70146,2025-08,42,2.907,9.68,extracted_data/January_2025/10.1101_2025.01.26.633040_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.27.635034_v1,10.1101/2025.01.27.635034,A PIF- and GUN1-regulated switch in cell axis growth drives cotyledon expansion through tissue-specific cell expansion and division,v1,2025-01-27,Plant Biology,The Plant Journal,10.1111/tpj.70196,2025-05,69,2.275,6.19,extracted_data/January_2025/10.1101_2025.01.27.635034_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.29.635337_v1,10.1101/2025.01.29.635337,A maize near-isogenic line population designed for gene discovery and characterization of allelic effects,v1,2025-01-29,Plant Biology,The Plant Journal,10.1111/tpj.70228,2025-06,69,2.275,6.19,extracted_data/February_2025/10.1101_2025.01.29.635337_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.30.635616_v1,10.1101/2025.01.30.635616,Immunity gene silencing increases transient protein expression in Nicotiana benthamiana,v1,2025-01-30,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70005,2025-05,42,2.907,9.68,extracted_data/February_2025/10.1101_2025.01.30.635616_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.01.31.635870_v2,10.1101/2025.01.31.635870,Two cowpea Rubisco activase isoforms for crop thermotolerance,v2,2025-01-31,Plant Biology,New Phytologist,10.1111/nph.70271,2025-08,36,3.293,8.18,extracted_data/February_2025/10.1101_2025.01.31.635870_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.02.636166_v1,10.1101/2025.02.02.636166,A trehalase-derived MAMP triggers LecRK-V-mediated immune responses in Arabidopsis,v1,2025-02-02,Plant Biology,Science Advances,10.1126/sciadv.adv8896,2025-08,17,4.324,12.06,extracted_data/February_2025/10.1101_2025.02.02.636166_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.03.636237_v1,10.1101/2025.02.03.636237,Volatile-Mediated Plant Defense Networks: Field Evidence for Isoprene as a Short-Distance Immune Signal,v1,2025-02-03,Plant Biology,"Plant, Cell & Environment",10.1111/pce.70153,2025-12,76,2.150,7.07,extracted_data/February_2025/10.1101_2025.02.03.636237_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.05.636625_v2,10.1101/2025.02.05.636625,The ABCG1 transporter facilitates sesquiterpene accumulation in Marchantia polymorpha oil bodies,v2,2025-02-05,Plant Biology,Communications Biology,10.1038/s42003-025-09508-4,2026-03-02,80,2.071,4.96,extracted_data/February_2025/10.1101_2025.02.05.636625_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.07.637104_v2,10.1101/2025.02.07.637104,Targeted genetic manipulation and yeast-like evolutionary genomics in the green alga Auxenochlorella,v2,2025-02-07,Plant Biology,The Plant Cell,10.1093/plcell/koaf259,2025-10-31,27,3.704,7.98,extracted_data/October_2025/10.1101_2025.02.07.637104_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.07.637139_v1,10.1101/2025.02.07.637139,Functional relocation of the maize chloroplast atpB gene to the nucleus restores photosynthetic competence to a gene-edited non-photosynthetic mutant,v1,2025-02-07,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70175,2025-09,42,2.907,9.68,extracted_data/February_2025/10.1101_2025.02.07.637139_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.09.637280_v1,10.1101/2025.02.09.637280,Neofunctionalized RGF pathways drive haustorial organogenesis in parasitic plants,v1,2025-02-09,Plant Biology,Science Advances,10.1126/sciadv.adw3965,2025-09-19,17,4.324,12.06,extracted_data/February_2025/10.1101_2025.02.09.637280_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.10.637364_v2,10.1101/2025.02.10.637364,TAC-C uncovers open chromatin interaction in crops and SPL-mediated photosynthesis regulation,v2,2025-02-10,Plant Biology,Science Advances,10.1126/sciadv.adu6565,2025-05-30,17,4.324,12.06,extracted_data/March_2025/10.1101_2025.02.10.637364_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.13.638044_v1,10.1101/2025.02.13.638044,Bacterial pathogen deploys iminosugar galactosyrin to manipulate plant glycobiology,v1,2025-02-13,Plant Biology,Science,10.1126/science.adp2433,2025-04-18,3,10.416,15.26,extracted_data/February_2025/10.1101_2025.02.13.638044_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.14.638267_v1,10.1101/2025.02.14.638267,Hydrogen Sulfide modulates Flagellin-Induced Stomatal Immunity,v1,2025-02-14,Plant Biology,Plant Physiology,10.1093/plphys/kiaf561,2025-11-26,74,2.162,5.93,extracted_data/February_2025/10.1101_2025.02.14.638267_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.17.638728_v1,10.1101/2025.02.17.638728,Remote sensing reveals inter- and intraspecific variation in riparian cottonwood (Populus spp) response to drought,v1,2025-02-17,Plant Biology,Journal of Ecology,10.1111/1365-2745.70061,2025-07,61,2.422,5.89,extracted_data/February_2025/10.1101_2025.02.17.638728_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.18.638636_v2,10.1101/2025.02.18.638636,Disruption of the mRNA m6A writer complex triggers autoimmunity in Arabidopsis,v2,2025-02-18,Plant Biology,PLOS Genetics,10.1371/journal.pgen.1011925,2025-11-06,92,1.945,3.48,extracted_data/July_2025/10.1101_2025.02.18.638636_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.18.638787_v1,10.1101/2025.02.18.638787,Artificial mutations in the nuclear gene encoding mitochondrial RNA polymerase restore pollen fertility in cytoplasmic male sterile tomato,v1,2025-02-18,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70417,2026-03,42,2.907,9.68,extracted_data/February_2025/10.1101_2025.02.18.638787_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.20.638842_v1,10.1101/2025.02.20.638842,Triphenylphosphonium is an effective targeting moiety for plants mitochondria,v1,2025-02-20,Plant Biology,New Phytologist,10.1111/nph.70381,2025-09,36,3.293,8.18,extracted_data/February_2025/10.1101_2025.02.20.638842_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.20.639250_v1,10.1101/2025.02.20.639250,Hypoxia-activated fluorescent probes as markers of oxygen levels in plant cells and tissues,v1,2025-02-20,Plant Biology,New Phytologist,10.1111/nph.70202,2025-09,36,3.293,8.18,extracted_data/February_2025/10.1101_2025.02.20.639250_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.22.639339_v1,10.1101/2025.02.22.639339,First Successful Targeted Mutagenesis Using CRISPR/Cas9 in Stably Transformed Grain Amaranth Tissue,v1,2025-02-22,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70590,2026-02-11,42,2.907,9.68,extracted_data/February_2025/10.1101_2025.02.22.639339_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.23.639722_v1,10.1101/2025.02.23.639722,Cryptic variation fuels plant phenotypic change through hierarchical epistasis,v1,2025-02-23,Plant Biology,Nature,10.1038/s41586-025-09243-0,2025-08-28,1,18.288,18.47,extracted_data/February_2025/10.1101_2025.02.23.639722_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.26.640300_v1,10.1101/2025.02.26.640300,Phytochrome A is required for light-inhibited germination of Aethionema arabicum seed,v1,2025-02-26,Plant Biology,New Phytologist,10.1111/nph.70344,2025-09,36,3.293,8.18,extracted_data/March_2025/10.1101_2025.02.26.640300_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.26.640321_v1,10.1101/2025.02.26.640321,Non-additive interactions between multiple mutualists and host plant genotype simultaneously promote increased plant growth and pathogen defense,v1,2025-02-26,Plant Biology,"Plant, Cell & Environment",10.1111/pce.15631,2025-05-23,76,2.150,7.07,extracted_data/March_2025/10.1101_2025.02.26.640321_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.02.26.640334_v1,10.1101/2025.02.26.640334,Aphid effector Mp10 balances immune suppression and defence activation through EDS1-dependent modulation of plant DAMP responses,v1,2025-02-26,Plant Biology,New Phytologist,10.1111/nph.70419,2025-10,36,3.293,8.18,extracted_data/March_2025/10.1101_2025.02.26.640334_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.02.640043_v1,10.1101/2025.03.02.640043,Ethylene modulates cell wall mechanics for root responses to compaction,v1,2025-03-02,Plant Biology,Nature,10.1038/s41586-025-09765-7,2026-01-15,1,18.288,18.47,extracted_data/March_2025/10.1101_2025.03.02.640043_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.03.641235_v2,10.1101/2025.03.03.641235,"A biphasic trajectory for maize stalk mechanics shaped by genetic, environmental, and biotic factors",v2,2025-03-03,Plant Biology,The Plant Journal,10.1111/tpj.70342,2025-07,69,2.275,6.19,extracted_data/June_2025/10.1101_2025.03.03.641235_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.03.641322_v1,10.1101/2025.03.03.641322,Developmental regulators enable rapid and efficient soybean transformation and CRISPR-mediated genome editing,v1,2025-03-03,Plant Biology,Plant Physiology,10.1093/plphys/kiaf640,2026-03-02,74,2.162,5.93,extracted_data/March_2025/10.1101_2025.03.03.641322_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.07.641920_v1,10.1101/2025.03.07.641920,Temporal analysis of physiological phenotypes identifies novel metabolic and genetic underpinnings of senescence in maize,v1,2025-03-07,Plant Biology,The Plant Cell,10.1093/plcell/koaf176,2025-07-22,27,3.704,7.98,extracted_data/March_2025/10.1101_2025.03.07.641920_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.10.642363_v1,10.1101/2025.03.10.642363,FveTRM5 plays a critical role in regulating fruit shape in woodland strawberry,v1,2025-03-10,Plant Biology,Horticulture Research,10.1093/hr/uhaf199,2025-10-24,65,2.354,8.03,extracted_data/March_2025/10.1101_2025.03.10.642363_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.14.643249_v1,10.1101/2025.03.14.643249,New insights into bryophyte arabinogalactan-proteins from a hornwort and a moss model organism,v1,2025-03-14,Plant Biology,The Plant Journal,10.1111/tpj.70312,2025-07,69,2.275,6.19,extracted_data/March_2025/10.1101_2025.03.14.643249_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.15.643409_v2,10.1101/2025.03.15.643409,Endocytosis of the damage-associated molecular pattern receptor PEPR1 is BAK1-dependent,v2,2025-03-15,Plant Biology,Journal of Integrative Plant Biology,10.1111/jipb.70083,2026-02,31,3.455,9.19,extracted_data/September_2025/10.1101_2025.03.15.643409_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.17.643809_v2,10.1101/2025.03.17.643809,Loss of PIF7 attenuates shade and elevated temperature responses throughout the lifecycle in pennycress,v2,2025-03-17,Plant Biology,"Plant, Cell & Environment",10.1111/pce.70379,2026-05,76,2.150,7.07,extracted_data/May_2025/10.1101_2025.03.17.643809_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.22.643860_v1,10.1101/2025.03.22.643860,Promoter replacement by genome editing creates gain-of-function traits in Arabidopsis,v1,2025-03-22,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70123,2025-07,42,2.907,9.68,extracted_data/March_2025/10.1101_2025.03.22.643860_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.23.644808_v1,10.1101/2025.03.23.644808,Canalization of flower production across thermal environments requires Florigen and CLAVATA signaling,v1,2025-03-23,Plant Biology,Current Biology,10.1016/j.cub.2025.06.001,2025-07,48,2.707,4.50,extracted_data/March_2025/10.1101_2025.03.23.644808_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.24.644787_v1,10.1101/2025.03.24.644787,"Arabidopsis root lipid droplets are hubs for membrane homeostasis under heat stress, and triterpenoid synthesis and storage",v1,2025-03-24,Plant Biology,New Phytologist,10.1111/nph.70726,2026-01,36,3.293,8.18,extracted_data/March_2025/10.1101_2025.03.24.644787_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.26.645447_v3,10.1101/2025.03.26.645447,Root exudation facilitates water infiltration and rewetting of dry soil,v3,2025-03-26,Plant Biology,"Plant, Cell & Environment",10.1111/pce.70240,2026-02,76,2.150,7.07,extracted_data/April_2025/10.1101_2025.03.26.645447_v3.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.28.645825_v1,10.1101/2025.03.28.645825,Extensive photophysiological variation in wild barley is linked to environmental origin,v1,2025-03-28,Plant Biology,New Phytologist,10.1111/nph.70659,2026-01,36,3.293,8.18,extracted_data/March_2025/10.1101_2025.03.28.645825_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.29.645954_v1,10.1101/2025.03.29.645954,A reference genome assembly of the alpine forage grass Elymus nutans,v1,2025-03-29,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70117,2025-09,42,2.907,9.68,extracted_data/March_2025/10.1101_2025.03.29.645954_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.30.646247_v1,10.1101/2025.03.30.646247,CBL1/9-CIPK6 complex negatively regulates Respiratory burst oxidase homolog D in Arabidopsis thaliana,v1,2025-03-30,Plant Biology,The Plant Journal,10.1111/tpj.70700,2026-02,69,2.275,6.19,extracted_data/March_2025/10.1101_2025.03.30.646247_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.03.31.646295_v1,10.1101/2025.03.31.646295,Evolutionary Trade-off Between Stomatal Defense and Gas Exchange in Brassicaceae,v1,2025-03-31,Plant Biology,Current Biology,10.1016/j.cub.2025.10.037,2025-12,48,2.707,4.50,extracted_data/April_2025/10.1101_2025.03.31.646295_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.01.646584_v1,10.1101/2025.04.01.646584,Genetic architecture of the S-locus supergene revealed in a tetraploid distylous species,v1,2025-04-01,Plant Biology,New Phytologist,10.1111/nph.70521,2025-11,36,3.293,8.18,extracted_data/April_2025/10.1101_2025.04.01.646584_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.03.646726_v1,10.1101/2025.04.03.646726,Convergent losses of arbuscular mycorrhizal symbiosis in carnivorous plants,v1,2025-04-03,Plant Biology,New Phytologist,10.1111/nph.70544,2025-11,36,3.293,8.18,extracted_data/April_2025/10.1101_2025.04.03.646726_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.03.647103_v2,10.1101/2025.04.03.647103,Welcome pathogens: transient heat dampens immune responses to acibenzolar-S-methyl in apple plants,v2,2025-04-03,Plant Biology,"Plant, Cell & Environment",10.1111/pce.70256,2026-03,76,2.150,7.07,extracted_data/September_2025/10.1101_2025.04.03.647103_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.07.646831_v1,10.1101/2025.04.07.646831,A network of RS splicing regulatory proteins controls light-dependent splicing and seedling development,v1,2025-04-07,Plant Biology,Plant Physiology,10.1093/plphys/kiaf482,2025-10-31,74,2.162,5.93,extracted_data/April_2025/10.1101_2025.04.07.646831_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.08.647801_v1,10.1101/2025.04.08.647801,MLO-mediated Ca2+ influx regulates root hair tip growth in Arabidopsis,v1,2025-04-08,Plant Biology,New Phytologist,10.1111/nph.70378,2025-12,36,3.293,8.18,extracted_data/April_2025/10.1101_2025.04.08.647801_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.09.647652_v1,10.1101/2025.04.09.647652,Phloem-Specific Translational Regulation of Soybean Nodulation: Insights from a Phloem-Targeted TRAP-Seq Approach,v1,2025-04-09,Plant Biology,Plant Physiology,10.1093/plphys/kiaf570,2025-10-31,74,2.162,5.93,extracted_data/April_2025/10.1101_2025.04.09.647652_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.10.648111_v1,10.1101/2025.04.10.648111,Precision RNAi in Tomato Using Synthetic Trans-Acting Small Interfering RNAs Derived From Minimal Precursors,v1,2025-04-10,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70410,2026-03,42,2.907,9.68,extracted_data/April_2025/10.1101_2025.04.10.648111_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.14.648630_v1,10.1101/2025.04.14.648630,STM is required for fate establishment of productive shoot progenitor cells in Arabidopsis tissue culture,v1,2025-04-14,Plant Biology,Plant Physiology,10.1093/plphys/kiaf671,2026-01-06,74,2.162,5.93,extracted_data/April_2025/10.1101_2025.04.14.648630_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.22.649968_v1,10.1101/2025.04.22.649968,Poplar CLE peptides stimulating ectomycorrhizal symbiosis uncovered by genome-wide identification of ectomycorrhizal-responsive small secreted peptides,v1,2025-04-22,Plant Biology,Plant Physiology,10.1093/plphys/kiag071,2026-03-02,74,2.162,5.93,extracted_data/April_2025/10.1101_2025.04.22.649968_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.22.650021_v2,10.1101/2025.04.22.650021,Single cell multi-omics reveals rare biosynthetic cell types in the medicinal tree Camptotheca acuminata,v2,2025-04-22,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70386,2026-02,42,2.907,9.68,extracted_data/June_2025/10.1101_2025.04.22.650021_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.25.650579_v1,10.1101/2025.04.25.650579,Defender or accomplice? Dual roles of plant vesicle trafficking in restricting and enabling geminiviral systemic infection,v1,2025-04-25,Plant Biology,New Phytologist,10.1111/nph.70707,2026-03,36,3.293,8.18,extracted_data/April_2025/10.1101_2025.04.25.650579_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.28.651025_v1,10.1101/2025.04.28.651025,The cytochrome P450 enzyme MpCYP78E1 inhibits meristem initiation and activity in Marchantia polymorpha,v1,2025-04-28,Plant Biology,Current Biology,10.1016/j.cub.2025.06.071,2025-08,48,2.707,4.50,extracted_data/May_2025/10.1101_2025.04.28.651025_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.04.30.651426_v1,10.1101/2025.04.30.651426,The Building Blocks of Early Land Plants: Glycosyltransferases and Cell Wall Architecture in the model liverwort Marchantia polymorpha,v1,2025-04-30,Plant Biology,The Plant Journal,10.1111/tpj.70439,2025-09,69,2.275,6.19,extracted_data/May_2025/10.1101_2025.04.30.651426_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.05.652163_v1,10.1101/2025.05.05.652163,Structural determinants for red-shifted absorption in higher-plants Photosystem I,v1,2025-05-05,Plant Biology,New Phytologist,10.1111/nph.70562,2025-12,36,3.293,8.18,extracted_data/May_2025/10.1101_2025.05.05.652163_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.07.652770_v3,10.1101/2025.05.07.652770,Floral Stage Optimization and Immune Evasion Enhance Agrobacterium-Mediated Genome Editing in Arabidopsis,v3,2025-05-07,Plant Biology,New Phytologist,10.1111/nph.70795,2026-02,36,3.293,8.18,extracted_data/October_2025/10.1101_2025.05.07.652770_v3.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.09.653223_v1,10.1101/2025.05.09.653223,Imputation integrates single-cell and spatial gene expression data to resolve transcriptional networks in barley shoot meristem development,v1,2025-05-09,Plant Biology,Nature Plants,10.1038/s41477-025-02176-6,2026-01-07,12,4.815,6.52,extracted_data/May_2025/10.1101_2025.05.09.653223_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.11.653304_v1,10.1101/2025.05.11.653304,The protective role of chloroplast NADH dehydrogenase-like complex (NDH) against PSI photoinhibition under chilling stress,v1,2025-05-11,Plant Biology,New Phytologist,10.1111/nph.70573,2025-12,36,3.293,8.18,extracted_data/May_2025/10.1101_2025.05.11.653304_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.15.654145_v2,10.1101/2025.05.15.654145,Rapid ethylene-triggered protein complex remodeling in dark grown hypocotyls,v2,2025-05-15,Plant Biology,Plant Physiology,10.1093/plphys/kiaf572,2025-11-26,74,2.162,5.93,extracted_data/September_2025/10.1101_2025.05.15.654145_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.15.654187_v1,10.1101/2025.05.15.654187,Catch & Release – rapid cost-effective protein purification from plants using a DIY GFP-Trap-protease approach,v1,2025-05-15,Plant Biology,The Plant Journal,10.1111/tpj.70544,2025-11,69,2.275,6.19,extracted_data/May_2025/10.1101_2025.05.15.654187_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.15.654287_v1,10.1101/2025.05.15.654287,Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis,v1,2025-05-15,Plant Biology,Plant Physiology,10.1093/plphys/kiaf667,2026-02-06,74,2.162,5.93,extracted_data/May_2025/10.1101_2025.05.15.654287_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.16.654532_v1,10.1101/2025.05.16.654532,The Role of SIAMESE in G2 Checkpoint Regulation in Arabidopsis thaliana,v1,2025-05-16,Plant Biology,New Phytologist,10.1111/nph.70947,2026-04,36,3.293,8.18,extracted_data/May_2025/10.1101_2025.05.16.654532_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.19.654792_v2,10.1101/2025.05.19.654792,Scaling law links plant growth variation to grain yield in wheat stands,v2,2025-05-19,Plant Biology,New Phytologist,10.1111/nph.71028,2026-02-17,36,3.293,8.18,extracted_data/May_2025/10.1101_2025.05.19.654792_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.23.655144_v1,10.1101/2025.05.23.655144,"EBSn, a robust synthetic reporter for monitoring ethylene responses in plants",v1,2025-05-23,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70302,2026-02,42,2.907,9.68,extracted_data/May_2025/10.1101_2025.05.23.655144_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.24.655927_v1,10.1101/2025.05.24.655927,Under salt stress quinoa stomatal guard cells control transpiration in an ABA-primed manner,v1,2025-05-24,Plant Biology,New Phytologist,10.1111/nph.70853,2026-03,36,3.293,8.18,extracted_data/May_2025/10.1101_2025.05.24.655927_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.05.29.656819_v1,10.1101/2025.05.29.656819,From Synthetic to Biological Nitrification Inhibition: Advancing Stabilization of Organic Fertilizers,v1,2025-05-29,Plant Biology,Soil Biology and Biochemistry,10.1016/j.soilbio.2025.109971,2025-12,21,3.982,11.87,extracted_data/June_2025/10.1101_2025.05.29.656819_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.02.657414_v1,10.1101/2025.06.02.657414,New alleles of Arabidopsis BIK1 reinforce its predominant role in pattern-triggered immunity and caution interpretations of other reported functions,v1,2025-06-02,Plant Biology,Nature Plants,10.1038/s41477-025-02187-3,2026-01-07,12,4.815,6.52,extracted_data/June_2025/10.1101_2025.06.02.657414_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.02.657439_v2,10.1101/2025.06.02.657439,The architecture of resilience: a genome assembly of Myrothamnus flabellifolia sheds light on desiccation tolerance and sex determination,v2,2025-06-02,Plant Biology,New Phytologist,10.1111/nph.70700,2026-01,36,3.293,8.18,extracted_data/June_2025/10.1101_2025.06.02.657439_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.03.657623_v2,10.1101/2025.06.03.657623,"Maize root growth, Oxygen and N availability drive formation of N2O hotspots in soil",v2,2025-06-03,Plant Biology,Geoderma,10.1016/j.geoderma.2026.117734,2026-03,81,2.067,7.31,extracted_data/July_2025/10.1101_2025.06.03.657623_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.03.657697_v1,10.1101/2025.06.03.657697,Comparative genomics-driven design of virus-delivered short RNA inserts triggering robust gene silencing,v1,2025-06-03,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70254,2025-11,42,2.907,9.68,extracted_data/June_2025/10.1101_2025.06.03.657697_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.04.657782_v1,10.1101/2025.06.04.657782,Cooperation between a root fungal endophyte and host-derived coumarin scopoletin mediates Arabidopsis iron nutrition,v1,2025-06-04,Plant Biology,New Phytologist,10.1111/nph.70476,2025-10,36,3.293,8.18,extracted_data/June_2025/10.1101_2025.06.04.657782_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.04.657892_v2,10.1101/2025.06.04.657892,"Pan-angiosperm analysis of the CLE signaling peptide gene family unveils paths, patterns, and predictions of paralog diversification",v2,2025-06-04,Plant Biology,Molecular Biology and Evolution,10.1093/molbev/msaf294,2025-10-29,19,4.085,5.04,extracted_data/June_2025/10.1101_2025.06.04.657892_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.05.658166_v1,10.1101/2025.06.05.658166,Phytoene synthase modulates seed longevity via the action of β-carotene derived metabolites,v1,2025-06-05,Plant Biology,Plant Physiology,10.1093/plphys/kiaf598,2025-11-26,74,2.162,5.93,extracted_data/June_2025/10.1101_2025.06.05.658166_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.09.658588_v1,10.1101/2025.06.09.658588,Undermining the cry for help: The phytopathogenic fungus Verticillium dahliae secretes an antimicrobial effector protein to undermine host recruitment of antagonistic Pseudomonas bacteria,v1,2025-06-09,Plant Biology,New Phytologist,10.1111/nph.70686,2026-01,36,3.293,8.18,extracted_data/June_2025/10.1101_2025.06.09.658588_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.10.659000_v1,10.1101/2025.06.10.659000,Structural Determinants and Biochemical Characterization of LORELEI as a GPI-Anchored Protein,v1,2025-06-10,Plant Biology,Plant Physiology,10.1093/plphys/kiaf626,2026-02-06,74,2.162,5.93,extracted_data/June_2025/10.1101_2025.06.10.659000_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.12.659277_v1,10.1101/2025.06.12.659277,Discovery of iridoid cyclase completes the iridoid pathway in asterids,v1,2025-06-12,Plant Biology,Nature Plants,10.1038/s41477-025-02122-6,2025-10-03,12,4.815,6.52,extracted_data/June_2025/10.1101_2025.06.12.659277_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.16.659989_v1,10.1101/2025.06.16.659989,Molecular Insights into the Production of Extracellular Vesicles by Plants,v1,2025-06-16,Plant Biology,Plant Physiology,10.1093/plphys/kiag011,2026-02-06,74,2.162,5.93,extracted_data/June_2025/10.1101_2025.06.16.659989_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.20.660755_v1,10.1101/2025.06.20.660755,Remote sensing of endogenous pigmentation by inducible synthetic circuits in grasses,v1,2025-06-20,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70480,2026-04,42,2.907,9.68,extracted_data/June_2025/10.1101_2025.06.20.660755_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.20.660812_v1,10.1101/2025.06.20.660812,Lf2 is a knotted homeobox regulator that modulates leaflet number in soybean,v1,2025-06-20,Plant Biology,The Plant Journal,10.1111/tpj.70658,2026-01,69,2.275,6.19,extracted_data/June_2025/10.1101_2025.06.20.660812_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.26.661617_v1,10.1101/2025.06.26.661617,An allelic resolution gene atlas for tetraploid potato provides insights into tuberization and stress resilience,v1,2025-06-26,Plant Biology,The Plant Journal,10.1111/tpj.70557,2025-11,69,2.275,6.19,extracted_data/June_2025/10.1101_2025.06.26.661617_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.26.661640_v1,10.1101/2025.06.26.661640,"Rhizobial infection-specific accumulation of phosphatidylinositol 4,5-bisphosphate inhibits the excessive infection of rhizobia in Lotus japonicus",v1,2025-06-26,Plant Biology,New Phytologist,10.1111/nph.70527,2025-11,36,3.293,8.18,extracted_data/July_2025/10.1101_2025.06.26.661640_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.28.661392_v2,10.1101/2025.06.28.661392,Phosphate resupply differentially impacts the shoot and root proteomes of Arabidopsis thaliana seedlings,v2,2025-06-28,Plant Biology,"Plant, Cell & Environment",10.1111/pce.70311,2026-03,76,2.150,7.07,extracted_data/September_2025/10.1101_2025.06.28.661392_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.06.30.662420_v1,10.1101/2025.06.30.662420,Unlocking Genetic Diversity in Colombian Cassava Landraces for Accelerated Breeding,v1,2025-06-30,Plant Biology,New Phytologist,10.1111/nph.70918,2026-05,36,3.293,8.18,extracted_data/July_2025/10.1101_2025.06.30.662420_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.01.662559_v2,10.1101/2025.07.01.662559,Florigen Activation Complex Dynamics and SVP-Mediated Repression Orchestrate Temperature-Regulated Flowering in Saffron,v2,2025-07-01,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70361,2026-03,42,2.907,9.68,extracted_data/October_2025/10.1101_2025.07.01.662559_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.01.662569_v1,10.1101/2025.07.01.662569,Homoeolog expression in polyploid wheat mutants shows limited transcriptional compensation,v1,2025-07-01,Plant Biology,New Phytologist,10.1111/nph.70646,2026-01,36,3.293,8.18,extracted_data/July_2025/10.1101_2025.07.01.662569_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.02.662806_v1,10.1101/2025.07.02.662806,Induction of synthetic apomixis in two sorghum hybrids enables seed yield and genotype preservation over multiple generations,v1,2025-07-02,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70441,2026-03,42,2.907,9.68,extracted_data/July_2025/10.1101_2025.07.02.662806_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.03.662983_v1,10.1101/2025.07.03.662983,Evidence for plastome loss in the holoparasitic Mystropetalaceae,v1,2025-07-03,Plant Biology,New Phytologist,10.1111/nph.70709,2026-01,36,3.293,8.18,extracted_data/July_2025/10.1101_2025.07.03.662983_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.05.663279_v1,10.1101/2025.07.05.663279,ERAD machinery controls the conditional turnover of PIN-LIKES in plants,v1,2025-07-05,Plant Biology,Science Advances,10.1126/sciadv.adx5027,2025-09-19,17,4.324,12.06,extracted_data/July_2025/10.1101_2025.07.05.663279_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.07.663415_v1,10.1101/2025.07.07.663415,Loss of function of chromatin remodeler OsCLSY4 leads to RdDM-mediated mis-expression of endosperm-specific genes affecting grain qualities,v1,2025-07-07,Plant Biology,PLOS Genetics,10.1371/journal.pgen.1011956,2025-12-01,92,1.945,3.48,extracted_data/July_2025/10.1101_2025.07.07.663415_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.07.663573_v1,10.1101/2025.07.07.663573,Bigger is not always better: Optimizing leaf area index with narrow leaf shape in soybean,v1,2025-07-07,Plant Biology,Plant Physiology,10.1093/plphys/kiaf663,2026-03-02,74,2.162,5.93,extracted_data/July_2025/10.1101_2025.07.07.663573_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.08.663657_v1,10.1101/2025.07.08.663657,A hierarchical abscission program regulates reproductive allocation in Prunus yedoensis and Prunus sargentii,v1,2025-07-08,Plant Biology,Horticulture Research,10.1093/hr/uhaf317,2026-01-29,65,2.354,8.03,extracted_data/July_2025/10.1101_2025.07.08.663657_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.14.664838_v1,10.1101/2025.07.14.664838,Fine-tuning RIPENING INHIBITOR (RIN) expression by introducing allelic mutations in its promoter using CRISPR/Cas9 multiplex editing,v1,2025-07-14,Plant Biology,Molecular Horticulture,10.1186/s43897-025-00200-z,2026-03-02,78,2.129,6.77,extracted_data/July_2025/10.1101_2025.07.14.664838_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.16.665073_v1,10.1101/2025.07.16.665073,Transcriptomic prey-capture responses in convergently evolved carnivorous pitcher plants,v1,2025-07-16,Plant Biology,New Phytologist,10.1111/nph.70848,2026-03,36,3.293,8.18,extracted_data/July_2025/10.1101_2025.07.16.665073_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.16.665077_v1,10.1101/2025.07.16.665077,Early seed priming with closely related Bacillus strains induces divergent physiological and defense responses in melon,v1,2025-07-16,Plant Biology,Horticulture Research,10.1093/hr/uhag053,2026-02-23,65,2.354,8.03,extracted_data/July_2025/10.1101_2025.07.16.665077_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.17.665317_v1,10.1101/2025.07.17.665317,Thylakoids reorganization enables driving photosynthesis under far-red light in the microalga Nannochloropsis gaditana,v1,2025-07-17,Plant Biology,New Phytologist,10.1111/nph.70786,2026-02,36,3.293,8.18,extracted_data/July_2025/10.1101_2025.07.17.665317_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.21.665833_v1,10.1101/2025.07.21.665833,Thermal acclimation fails to confer a carbon budget advantage to invasive species over natives,v1,2025-07-21,Plant Biology,Plant Physiology,10.1093/plphys/kiaf574,2025-10-31,74,2.162,5.93,extracted_data/July_2025/10.1101_2025.07.21.665833_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.22.664359_v1,10.1101/2025.07.22.664359,Gain and loss of gene function shaped the nickel hyperaccumulation trait in Noccaea caerulescens,v1,2025-07-22,Plant Biology,The Plant Cell,10.1093/plcell/koaf281,2026-01-02,27,3.704,7.98,extracted_data/July_2025/10.1101_2025.07.22.664359_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.24.666638_v1,10.1101/2025.07.24.666638,Mitotic entry is controlled by the plant-specific phosphatase BSL1 and cyclin-dependent kinase B,v1,2025-07-24,Plant Biology,Nature Plants,10.1038/s41477-025-02145-z,2025-11-13,12,4.815,6.52,extracted_data/July_2025/10.1101_2025.07.24.666638_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.29.667350_v1,10.1101/2025.07.29.667350,The mechanical properties of Arabidopsis thaliana roots adapt dynamically during development and to stress,v1,2025-07-29,Plant Biology,Science Advances,10.1126/sciadv.aeb0032,2026-02-20,17,4.324,12.06,extracted_data/August_2025/10.1101_2025.07.29.667350_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.07.29.667563_v2,10.1101/2025.07.29.667563,SPEECHLESS duplication in grasses expands potential for environmental regulation of stomatal development,v2,2025-07-29,Plant Biology,New Phytologist,10.1111/nph.70695,2026-01,36,3.293,8.18,extracted_data/October_2025/10.1101_2025.07.29.667563_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.08.01.668105_v1,10.1101/2025.08.01.668105,Cell-type specific gating of gene regulatory modules as a hallmark of early immune responses in Arabidopsis leaves,v1,2025-08-01,Plant Biology,New Phytologist,10.1111/nph.70858,2026-01-07,36,3.293,8.18,extracted_data/August_2025/10.1101_2025.08.01.668105_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.08.04.667500_v1,10.1101/2025.08.04.667500,Antagonistic interactions between CLAVATA receptors shape maize ear development,v1,2025-08-04,Plant Biology,New Phytologist,10.1111/nph.70950,2026-01-25,36,3.293,8.18,extracted_data/August_2025/10.1101_2025.08.04.667500_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.08.05.668606_v2,10.1101/2025.08.05.668606,CRK2 modulates flowering in Arabidopsis together with GLYCINE- RICH RNA BINDING PROTEIN 7 (GRP7),v2,2025-08-05,Plant Biology,New Phytologist,10.1111/nph.70901,2026-04,36,3.293,8.18,extracted_data/November_2025/10.1101_2025.08.05.668606_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.08.06.668652_v1,10.1101/2025.08.06.668652,"GT61 β-1,2-xylosyltransferases define a conserved xylan modification in gymnosperm and Arabidopsis primary cell walls",v1,2025-08-06,Plant Biology,The Plant Journal,10.1111/tpj.70545,2025-11,69,2.275,6.19,extracted_data/August_2025/10.1101_2025.08.06.668652_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.08.06.668860_v1,10.1101/2025.08.06.668860,Structural assembly of maize CRY-GL2 photosignaling complex provides insights into its regulatory role in cuticular wax biosynthesis,v1,2025-08-06,Plant Biology,Science Advances,10.1126/sciadv.adz0136,2025-12-05,17,4.324,12.06,extracted_data/August_2025/10.1101_2025.08.06.668860_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.08.15.670611_v1,10.1101/2025.08.15.670611,Identification of a novel link connecting indole-3-acetamide with abscisic acid biosynthesis and signaling,v1,2025-08-15,Plant Biology,New Phytologist,10.1111/nph.70819,2026-03,36,3.293,8.18,extracted_data/August_2025/10.1101_2025.08.15.670611_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.08.24.672037_v1,10.1101/2025.08.24.672037,TCP3-mediated regulation of cell expansion in Arabidopsis thaliana,v1,2025-08-24,Plant Biology,New Phytologist,10.1111/nph.70631,2025-12,36,3.293,8.18,extracted_data/August_2025/10.1101_2025.08.24.672037_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.08.25.671896_v1,10.1101/2025.08.25.671896,Beyond species means – the intraspecific contribution to global wood density variation,v1,2025-08-25,Plant Biology,New Phytologist,10.1111/nph.70860,2026-03,36,3.293,8.18,extracted_data/August_2025/10.1101_2025.08.25.671896_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.08.25.671915_v1,10.1101/2025.08.25.671915,"PAM18-3, a J-domain protein, maintains mitochondrial integrity and plant growth and development in Arabidopsis thaliana",v1,2025-08-25,Plant Biology,The Plant Journal,10.1111/tpj.70704,2026-02,69,2.275,6.19,extracted_data/August_2025/10.1101_2025.08.25.671915_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.08.28.672806_v2,10.1101/2025.08.28.672806,"Strain, procedures, and tools for reproducible genetic transformation and genome editing of the emerging plant model Spirodela polyrhiza (L.) Schleid",v2,2025-08-28,Plant Biology,New Phytologist,10.1111/nph.70919,2026-04,36,3.293,8.18,extracted_data/December_2025/10.1101_2025.08.28.672806_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.09.04.674230_v1,10.1101/2025.09.04.674230,Enhanced MicroRNA Accumulation and Gene Silencing Efficiency through Optimized Precursor Base Pairing,v1,2025-09-04,Plant Biology,The Plant Journal,10.1111/tpj.70665,2026-01,69,2.275,6.19,extracted_data/September_2025/10.1101_2025.09.04.674230_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.09.08.674960_v2,10.1101/2025.09.08.674960,The Lotus japonicus alpha Expansin EXPA1 is recruited during intracellular and intercellular rhizobial colonization,v2,2025-09-08,Plant Biology,The Plant Journal,10.1111/tpj.70639,2025-12,69,2.275,6.19,extracted_data/September_2025/10.1101_2025.09.08.674960_v2.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.09.12.675711_v1,10.1101/2025.09.12.675711,The Annotated Blueprint: Integrated Functional Genomic Resources for a model Tetraploid Wheat Triticum turgidum cv. Kronos,v1,2025-09-12,Plant Biology,New Phytologist,10.1111/nph.71006,2026-05,36,3.293,8.18,extracted_data/September_2025/10.1101_2025.09.12.675711_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.09.16.676639_v1,10.1101/2025.09.16.676639,"Starch synthesis in Brachypodium distachyon endosperm occurs in dynamic, connected amyloplast compartments",v1,2025-09-16,Plant Biology,New Phytologist,10.1111/nph.70803,2026-03,36,3.293,8.18,extracted_data/September_2025/10.1101_2025.09.16.676639_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.09.17.676453_v3,10.1101/2025.09.17.676453,A deep-time landscape of plant cis-regulatory sequence evolution,v3,2025-09-17,Plant Biology,Science,10.1126/science.adt8983,2026-03-12,3,10.416,15.26,extracted_data/February_2026/10.1101_2025.09.17.676453_v3.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.09.17.676879_v1,10.1101/2025.09.17.676879,Spatial inheritance patterns across maize ears are associated with alleles that reduce pollen fitness,v1,2025-09-17,Plant Biology,The Plant Journal,10.1111/tpj.70760,2026-03,69,2.275,6.19,extracted_data/September_2025/10.1101_2025.09.17.676879_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.09.18.677122_v1,10.1101/2025.09.18.677122,Samplify: A versatile tool for image-based segmentation and annotation of seed abortion phenotypes,v1,2025-09-18,Plant Biology,New Phytologist,10.1111/nph.70979,2026-05,36,3.293,8.18,extracted_data/September_2025/10.1101_2025.09.18.677122_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.09.26.678716_v1,10.1101/2025.09.26.678716,Type one protein phosphatases (TOPPs) catalyze EIN2 dephosphorylation to regulate ethylene signaling in Arabidopsis,v1,2025-09-26,Plant Biology,Science Advances,10.1126/sciadv.aec5937,2026-02-13,17,4.324,12.06,extracted_data/September_2025/10.1101_2025.09.26.678716_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.09.27.678933_v1,10.1101/2025.09.27.678933,Evidence for rapid hydrolysis of shoot-derived sucrose using an ultrasensitive ratiometric Matryoshka-type MGlucoMeter sensor,v1,2025-09-27,Plant Biology,The Plant Journal,10.1111/tpj.70778,2026-03,69,2.275,6.19,extracted_data/October_2025/10.1101_2025.09.27.678933_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.09.30.679447_v1,10.1101/2025.09.30.679447,Sorghum embryos undergoing B chromosome elimination express B-variants of mitotic-related genes,v1,2025-09-30,Plant Biology,Genome Biology,10.1186/s13059-025-03915-w,2025-12-24,9,5.710,9.04,extracted_data/October_2025/10.1101_2025.09.30.679447_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.10.02.680005_v1,10.1101/2025.10.02.680005,Regulation of Vacuole Fusion in Stomata by Dephosphorylation of the HOPS subunit VPS39,v1,2025-10-02,Plant Biology,The Plant Journal,10.1111/tpj.70640,2025-12,69,2.275,6.19,extracted_data/October_2025/10.1101_2025.10.02.680005_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.10.12.681932_v1,10.1101/2025.10.12.681932,Rhizobial motility preference in root colonization of Medicago truncatula,v1,2025-10-12,Plant Biology,New Phytologist,10.1111/nph.70897,2026-04,36,3.293,8.18,extracted_data/October_2025/10.1101_2025.10.12.681932_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.11.05.686864_v1,10.1101/2025.11.05.686864,"MicroRNA156 and its targeted SPL genes interact with the photoperiod, vernalization, and gibberellin pathways to regulate wheat heading time",v1,2025-11-05,Plant Biology,The Plant Journal,10.1111/tpj.70656,2026-01,69,2.275,6.19,extracted_data/November_2025/10.1101_2025.11.05.686864_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.11.07.687273_v1,10.1101/2025.11.07.687273,"FLOWERING LOCUS T1 is a pleiotropic regulator of reproductive development, plant longevity, and source-sink relations in barley",v1,2025-11-07,Plant Biology,Plant Physiology,10.1093/plphys/kiag015,2026-02-06,74,2.162,5.93,extracted_data/November_2025/10.1101_2025.11.07.687273_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.11.18.688998_v1,10.1101/2025.11.18.688998,In Vitro Dynamic and Quantitative Monitoring of Strigolactone-signaling Complex Formation by Time-resolved FRET,v1,2025-11-18,Plant Biology,The Plant Journal,10.1111/tpj.70624,2025-12,69,2.275,6.19,extracted_data/November_2025/10.1101_2025.11.18.688998_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.1101_2025.11.24.690335_v1,10.1101/2025.11.24.690335,"Chromosome-scale haplotype genome assemblies for the Australian mango ‘Kensington Pride’ and a wild relative, Mangifera laurina, provide insights into anthracnose-resistance and volatile compound biosynthesis genes",v1,2025-11-24,Plant Biology,Plant Biotechnology Journal,10.1111/pbi.70556,2026-01-24,42,2.907,9.68,extracted_data/November_2025/10.1101_2025.11.24.690335_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.64898_2025.12.05.692691_v1,10.64898/2025.12.05.692691,"High-efficiency, transgene-free plant genome editing by viral delivery of an engineered TnpB",v1,2025-12-05,Plant Biology,Nature Plants,10.1038/s41477-026-02237-4,2026-02-20,12,4.815,6.52,extracted_data/December_2025/10.64898_2025.12.05.692691_v1.xml,top100_ag_bio_multi_journals.csv
plant_biology_agbio,10.64898_2026.02.10.705068_v1,10.64898/2026.02.10.705068,Beyond the Highlands: Climate Drives Evolutionary Connections Between Ancient Neotropical Mountains and Lowland Biomes,v1,2026-02-10,Plant Biology,Global Ecology and Biogeography,10.1111/geb.70214,2026-02,53,2.603,6.20,extracted_data/February_2026/10.64898_2026.02.10.705068_v1.xml,top100_ag_bio_multi_journals.csv