diff --git a/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraA_20261002T000131.log b/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraA_20261002T000131.log new file mode 100644 index 0000000000000000000000000000000000000000..d91d52e15b25907d65f5493c576ea065150b7e89 --- /dev/null +++ b/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraA_20261002T000131.log @@ -0,0 +1,1051 @@ +JOB_START 2026-10-02T00:01:31+09:00 --design fewshot --dataset giroux2022 --draws 0,1,2,3,4 --threads 6 +00:01:32 giroux2022 fewshot draw0 : 11 scored samples; fitting the scorer's view +00:01:32 bandwidth m (median pairwise distance of R1, PCA-50) = 33.8630 +00:01:34 observed cells: 105280 in 11 samples; R1/R2 rebuilt = reference.npz; R3 1650 cells (0 samples with fewer than n) +00:01:44 real_R2 [R1 raw] P/C k10 0.9988/1.0000 k5 0.9958/0.9970 k3 0.9897/0.9873 | AUC knn 0.600 rf 0.932 | 1-NN 0.538 | MMD2 0.0023 (3.3 s) +00:01:47 real_R2 [R1 dm] P/C k10 0.9982/1.0000 k5 0.9952/0.9976 k3 0.9903/0.9885 | AUC knn 0.595 rf 0.929 | 1-NN 0.538 | MMD2 0.0022 (3.4 s) +00:01:51 real_R3 [R2 raw] AUC knn 0.499 rf 0.515 | 1-NN 0.517 | MMD2 -0.0001 (3.4 s) +00:01:54 real_R3 [R2 dm] AUC knn 0.496 rf 0.509 | 1-NN 0.507 | MMD2 -0.0002 (3.5 s) +00:01:59 real_R2 E_N[pc] sq 0.2514 (LB 437.036 UB 600.791 Dif 478.206) l2 0.2525 (4.3 s) +00:02:21 real_R2 E_N[all] sq 0.1401 (LB 272.666 UB 355.170 Dif 284.227) l2 0.1313 (18.1 s) +00:02:25 zs_raw: zs__raw_all.npz sha 16b110e1effd (receipt verified), 16500 scored cells, 1650 in the P/C subsample (same rows as the scorer) +00:02:29 zs_raw [R1 raw] P/C k10 0.9873/0.4479 k5 0.9382/0.3358 k3 0.8824/0.2752 | AUC knn 0.956 rf 0.996 | 1-NN 0.914 | MMD2 0.1013 (3.0 s) +00:02:32 zs_raw [R1 dm] P/C k10 0.9988/0.4958 k5 0.9824/0.3745 k3 0.9539/0.3127 | AUC knn 0.931 rf 0.998 | 1-NN 0.894 | MMD2 0.0774 (3.0 s) +00:02:34 zs_raw [R2 raw] AUC knn 0.995 rf 0.996 | 1-NN 0.975 | MMD2 0.1051 (2.6 s) +00:02:37 zs_raw [R2 dm] AUC knn 0.990 rf 0.992 | 1-NN 0.967 | MMD2 0.0773 (2.7 s) +00:02:42 zs_raw E_N[pc] sq 7.3534 (LB 454.755 UB 525.426 Dif 974.431) l2 5.8286 (5.4 s) +00:03:03 zs_raw E_N[all] sq 6.0033 (LB 263.426 UB 328.893 Dif 656.444) l2 4.8799 (20.7 s) +00:03:03 zs_raw done in 42 s +00:03:05 zs_cal: zs__cal.npz sha 5d5bf1c12a5b (receipt verified), 16500 scored cells, 1650 in the P/C subsample (same rows as the scorer) +00:03:08 zs_cal [R1 raw] P/C k10 0.9933/0.9333 k5 0.9733/0.8497 k3 0.9521/0.7503 | AUC knn 0.874 rf 0.978 | 1-NN 0.745 | MMD2 0.0259 (3.3 s) +00:03:12 zs_cal [R1 dm] P/C k10 0.9873/0.9085 k5 0.9545/0.8158 k3 0.9200/0.7345 | AUC knn 0.889 rf 0.964 | 1-NN 0.754 | MMD2 0.0212 (3.2 s) +00:03:14 zs_cal [R2 raw] AUC knn 0.946 rf 0.951 | 1-NN 0.867 | MMD2 0.0260 (2.6 s) +00:03:17 zs_cal [R2 dm] AUC knn 0.931 rf 0.945 | 1-NN 0.845 | MMD2 0.0238 (2.7 s) +00:03:22 zs_cal E_N[pc] sq 1.8430 (LB 466.518 UB 575.079 Dif 666.596) l2 1.7176 (5.4 s) +00:03:43 zs_cal E_N[all] sq 3.2765 (LB 274.305 UB 332.588 Dif 465.271) l2 2.8945 (20.2 s) +00:03:43 zs_cal done in 39 s +00:03:44 lora5: lora__raw.npz sha 301785783e62 (receipt verified), 16500 scored cells, 1650 in the P/C subsample (same rows as the scorer) +00:03:48 lora5 [R1 raw] P/C k10 0.9994/0.9600 k5 0.9933/0.8933 k3 0.9806/0.8073 | AUC knn 0.829 rf 0.972 | 1-NN 0.712 | MMD2 0.0233 (3.5 s) +00:03:51 lora5 [R1 dm] P/C k10 0.9945/0.9691 k5 0.9752/0.9042 k3 0.9327/0.8164 | AUC knn 0.808 rf 0.930 | 1-NN 0.702 | MMD2 0.0093 (3.1 s) +00:03:54 lora5 [R2 raw] AUC knn 0.894 rf 0.909 | 1-NN 0.794 | MMD2 0.0170 (2.8 s) +00:03:57 lora5 [R2 dm] AUC knn 0.823 rf 0.870 | 1-NN 0.712 | MMD2 0.0073 (2.8 s) +00:04:04 lora5 E_N[pc] sq 1.4172 (LB 482.317 UB 578.385 Dif 618.466) l2 1.4304 (6.8 s) +00:04:26 lora5 E_N[all] sq 2.3034 (LB 279.986 UB 333.801 Dif 403.944) l2 2.1917 (22.1 s) +00:04:26 lora5 done in 43 s +00:04:29 zs_pseudo: zs__pseudo_all.npz sha b77ee477b7f9 (receipt verified), 16500 scored cells, 1650 in the P/C subsample (same rows as the scorer) +00:04:33 zs_pseudo [R1 raw] P/C k10 0.9958/0.9358 k5 0.9836/0.8503 k3 0.9661/0.7642 | AUC knn 0.863 rf 0.973 | 1-NN 0.734 | MMD2 0.0233 (3.2 s) +00:04:35 zs_pseudo [R1 dm] P/C k10 0.9921/0.9618 k5 0.9691/0.9030 k3 0.9406/0.8109 | AUC knn 0.847 rf 0.937 | 1-NN 0.709 | MMD2 0.0169 (2.9 s) +00:04:38 zs_pseudo [R2 raw] AUC knn 0.934 rf 0.942 | 1-NN 0.845 | MMD2 0.0200 (2.9 s) +00:04:41 zs_pseudo [R2 dm] AUC knn 0.872 rf 0.901 | 1-NN 0.762 | MMD2 0.0174 (3.0 s) +00:04:46 zs_pseudo E_N[pc] sq 1.0899 (LB 455.582 UB 593.108 Dif 605.478) l2 1.0943 (4.3 s) +00:05:10 zs_pseudo E_N[all] sq 2.4513 (LB 276.586 UB 334.201 Dif 417.820) l2 2.2859 (23.9 s) +00:05:10 zs_pseudo done in 44 s +00:05:11 scsemi5: scsemi5__raw.npz sha f354c6afe975 (receipt verified), 16500 scored cells, 1650 in the P/C subsample (same rows as the scorer) +00:05:14 scsemi5 [R1 raw] P/C k10 0.9964/0.6127 k5 0.9600/0.4752 k3 0.8945/0.3691 | AUC knn 0.968 rf 0.999 | 1-NN 0.908 | MMD2 0.0712 (3.0 s) +00:05:17 scsemi5 [R1 dm] P/C k10 0.3897/0.2503 k5 0.2830/0.1612 k3 0.2121/0.1145 | AUC knn 0.995 rf 0.999 | 1-NN 0.975 | MMD2 0.0889 (3.0 s) +00:05:20 scsemi5 [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.985 | MMD2 0.0710 (2.8 s) +00:05:23 scsemi5 [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.984 | MMD2 0.0919 (2.8 s) +00:05:28 scsemi5 E_N[pc] sq 1.1418 (LB 369.998 UB 633.473 Dif 670.827) l2 1.1250 (5.1 s) +00:05:52 scsemi5 E_N[all] sq 4.0499 (LB 262.028 UB 332.408 Dif 547.065) l2 3.4545 (23.4 s) +00:05:52 scsemi5 done in 42 s +00:05:52 unit draw0 of giroux2022 written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/giroux2022/fewshot_n5/draw0 in 260.1 s (k=10 max |diff| vs scorer 0.00e+00) +00:05:52 giroux2022 fewshot draw1 : 10 scored samples; fitting the scorer's view +00:05:52 bandwidth m (median pairwise distance of R1, PCA-50) = 33.6723 +00:05:52 observed cells: 98608 in 10 samples; R1/R2 rebuilt = reference.npz; R3 1500 cells (0 samples with fewer than n) +00:06:02 real_R2 [R1 raw] P/C k10 1.0000/1.0000 k5 0.9993/0.9987 k3 0.9953/0.9913 | AUC knn 0.579 rf 0.948 | 1-NN 0.531 | MMD2 0.0022 (3.5 s) +00:06:05 real_R2 [R1 dm] P/C k10 0.9993/1.0000 k5 0.9987/0.9993 k3 0.9940/0.9880 | AUC knn 0.589 rf 0.945 | 1-NN 0.529 | MMD2 0.0021 (3.5 s) +00:06:08 real_R3 [R2 raw] AUC knn 0.499 rf 0.482 | 1-NN 0.513 | MMD2 0.0001 (2.8 s) +00:06:11 real_R3 [R2 dm] AUC knn 0.499 rf 0.486 | 1-NN 0.513 | MMD2 0.0001 (2.9 s) +00:06:17 real_R2 E_N[pc] sq 0.2732 (LB 465.303 UB 610.440 Dif 504.956) l2 0.2657 (5.5 s) +00:06:33 real_R2 E_N[all] sq 0.0940 (LB 278.758 UB 370.309 Dif 287.366) l2 0.0824 (13.4 s) +00:06:34 zs_raw: zs__raw_all.npz sha 16b110e1effd (receipt verified), 15000 scored cells, 1500 in the P/C subsample (same rows as the scorer) +00:06:36 zs_raw [R1 raw] P/C k10 0.9887/0.5407 k5 0.9160/0.4073 k3 0.8520/0.3300 | AUC knn 0.954 rf 0.995 | 1-NN 0.897 | MMD2 0.0875 (2.2 s) +00:06:39 zs_raw [R1 dm] P/C k10 0.9973/0.6440 k5 0.9667/0.5047 k3 0.9280/0.4140 | AUC knn 0.914 rf 0.996 | 1-NN 0.861 | MMD2 0.0580 (2.6 s) +00:06:42 zs_raw [R2 raw] AUC knn 0.991 rf 0.994 | 1-NN 0.965 | MMD2 0.0890 (2.6 s) +00:06:44 zs_raw [R2 dm] AUC knn 0.986 rf 0.992 | 1-NN 0.955 | MMD2 0.0575 (2.4 s) +00:06:47 zs_raw E_N[pc] sq 6.3940 (LB 474.022 UB 547.133 Dif 941.492) l2 5.1863 (3.4 s) +00:07:05 zs_raw E_N[all] sq 5.4973 (LB 270.921 UB 333.910 Dif 617.190) l2 4.5770 (17.7 s) +00:07:05 zs_raw done in 32 s +00:07:07 zs_cal: zs__cal.npz sha 6f700eb64f0f (receipt verified), 15000 scored cells, 1500 in the P/C subsample (same rows as the scorer) +00:07:10 zs_cal [R1 raw] P/C k10 0.9953/0.9367 k5 0.9740/0.8533 k3 0.9427/0.7887 | AUC knn 0.864 rf 0.977 | 1-NN 0.722 | MMD2 0.0281 (3.0 s) +00:07:13 zs_cal [R1 dm] P/C k10 0.9913/0.9460 k5 0.9507/0.8753 k3 0.9147/0.7987 | AUC knn 0.862 rf 0.950 | 1-NN 0.717 | MMD2 0.0248 (3.0 s) +00:07:16 zs_cal [R2 raw] AUC knn 0.934 rf 0.942 | 1-NN 0.864 | MMD2 0.0278 (2.7 s) +00:07:19 zs_cal [R2 dm] AUC knn 0.900 rf 0.915 | 1-NN 0.804 | MMD2 0.0258 (2.7 s) +00:07:23 zs_cal E_N[pc] sq 1.3273 (LB 474.812 UB 602.747 Dif 644.619) l2 1.2479 (4.7 s) +00:07:44 zs_cal E_N[all] sq 2.7699 (LB 280.085 UB 337.326 Dif 438.640) l2 2.4982 (20.9 s) +00:07:44 zs_cal done in 39 s +00:07:46 lora5: lora__raw.npz sha a525bb58fc9b (receipt verified), 15000 scored cells, 1500 in the P/C subsample (same rows as the scorer) +00:07:50 lora5 [R1 raw] P/C k10 1.0000/0.9527 k5 0.9967/0.8947 k3 0.9820/0.8247 | AUC knn 0.816 rf 0.971 | 1-NN 0.692 | MMD2 0.0217 (3.2 s) +00:07:53 lora5 [R1 dm] P/C k10 0.9953/0.9680 k5 0.9747/0.9253 k3 0.9320/0.8613 | AUC knn 0.787 rf 0.919 | 1-NN 0.679 | MMD2 0.0069 (3.0 s) +00:07:55 lora5 [R2 raw] AUC knn 0.899 rf 0.907 | 1-NN 0.807 | MMD2 0.0171 (2.7 s) +00:07:58 lora5 [R2 dm] AUC knn 0.812 rf 0.846 | 1-NN 0.725 | MMD2 0.0057 (2.6 s) +00:08:02 lora5 E_N[pc] sq 1.2697 (LB 500.637 UB 601.179 Dif 628.294) l2 1.2595 (4.5 s) +00:08:25 lora5 E_N[all] sq 2.3493 (LB 286.964 UB 338.853 Dif 408.864) l2 2.2203 (22.1 s) +00:08:25 lora5 done in 40 s +00:08:25 zs_pseudo: zs__pseudo_all.npz sha b77ee477b7f9 (receipt verified), 15000 scored cells, 1500 in the P/C subsample (same rows as the scorer) +00:08:28 zs_pseudo [R1 raw] P/C k10 0.9967/0.9327 k5 0.9893/0.8440 k3 0.9747/0.7600 | AUC knn 0.841 rf 0.975 | 1-NN 0.726 | MMD2 0.0263 (3.3 s) +00:08:32 zs_pseudo [R1 dm] P/C k10 0.9893/0.9400 k5 0.9687/0.8747 k3 0.9420/0.8040 | AUC knn 0.831 rf 0.933 | 1-NN 0.698 | MMD2 0.0217 (3.3 s) +00:08:34 zs_pseudo [R2 raw] AUC knn 0.930 rf 0.936 | 1-NN 0.840 | MMD2 0.0240 (2.7 s) +00:08:37 zs_pseudo [R2 dm] AUC knn 0.862 rf 0.879 | 1-NN 0.762 | MMD2 0.0223 (2.7 s) +00:08:42 zs_pseudo E_N[pc] sq 1.1254 (LB 477.628 UB 612.230 Dif 629.114) l2 1.1127 (4.5 s) +00:09:01 zs_pseudo E_N[all] sq 2.6108 (LB 283.301 UB 338.355 Dif 427.037) l2 2.4075 (18.9 s) +00:09:01 zs_pseudo done in 36 s +00:09:02 scsemi5: scsemi5__raw.npz sha 99b6ea9af5e6 (receipt verified), 15000 scored cells, 1500 in the P/C subsample (same rows as the scorer) +00:09:05 scsemi5 [R1 raw] P/C k10 0.9880/0.5820 k5 0.9373/0.4380 k3 0.8653/0.3493 | AUC knn 0.971 rf 0.999 | 1-NN 0.915 | MMD2 0.0854 (2.6 s) +00:09:07 scsemi5 [R1 dm] P/C k10 0.4240/0.2300 k5 0.2900/0.1587 k3 0.2107/0.1080 | AUC knn 0.995 rf 0.999 | 1-NN 0.978 | MMD2 0.1035 (2.6 s) +00:09:10 scsemi5 [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.987 | MMD2 0.0881 (2.6 s) +00:09:13 scsemi5 [R2 dm] AUC knn 0.997 rf 1.000 | 1-NN 0.986 | MMD2 0.1070 (2.6 s) +00:09:17 scsemi5 E_N[pc] sq 1.1957 (LB 391.856 UB 654.843 Dif 706.303) l2 1.1553 (4.9 s) +00:09:37 scsemi5 E_N[all] sq 4.5555 (LB 268.548 UB 336.165 Dif 576.580) l2 3.8082 (19.8 s) +00:09:37 scsemi5 done in 37 s +00:09:37 unit draw1 of giroux2022 written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/giroux2022/fewshot_n5/draw1 in 225.6 s (k=10 max |diff| vs scorer 0.00e+00) +00:09:37 giroux2022 fewshot draw2 : 12 scored samples; fitting the scorer's view +00:09:38 bandwidth m (median pairwise distance of R1, PCA-50) = 33.4021 +00:09:38 observed cells: 125946 in 12 samples; R1/R2 rebuilt = reference.npz; R3 1800 cells (0 samples with fewer than n) +00:09:51 real_R2 [R1 raw] P/C k10 0.9989/1.0000 k5 0.9956/1.0000 k3 0.9900/0.9933 | AUC knn 0.591 rf 0.926 | 1-NN 0.538 | MMD2 0.0016 (3.5 s) +00:09:55 real_R2 [R1 dm] P/C k10 0.9994/1.0000 k5 0.9967/1.0000 k3 0.9889/0.9939 | AUC knn 0.598 rf 0.924 | 1-NN 0.535 | MMD2 0.0016 (3.6 s) +00:09:58 real_R3 [R2 raw] AUC knn 0.494 rf 0.478 | 1-NN 0.509 | MMD2 -0.0000 (2.8 s) +00:10:01 real_R3 [R2 dm] AUC knn 0.486 rf 0.492 | 1-NN 0.501 | MMD2 -0.0001 (3.0 s) +00:10:04 real_R2 E_N[pc] sq 0.2791 (LB 423.700 UB 579.891 Dif 467.293) l2 0.2760 (3.4 s) +00:10:25 real_R2 E_N[all] sq 0.1779 (LB 266.790 UB 355.474 Dif 282.568) l2 0.1800 (17.3 s) +00:10:26 zs_raw: zs__raw_all.npz sha 16b110e1effd (receipt verified), 18000 scored cells, 1800 in the P/C subsample (same rows as the scorer) +00:10:29 zs_raw [R1 raw] P/C k10 0.9761/0.4183 k5 0.9283/0.3211 k3 0.8489/0.2700 | AUC knn 0.969 rf 0.997 | 1-NN 0.917 | MMD2 0.1055 (2.9 s) +00:10:32 zs_raw [R1 dm] P/C k10 0.9944/0.4622 k5 0.9800/0.3572 k3 0.9394/0.3039 | AUC knn 0.942 rf 0.998 | 1-NN 0.897 | MMD2 0.0812 (3.1 s) +00:10:35 zs_raw [R2 raw] AUC knn 0.995 rf 0.997 | 1-NN 0.975 | MMD2 0.1092 (2.7 s) +00:10:38 zs_raw [R2 dm] AUC knn 0.991 rf 0.995 | 1-NN 0.964 | MMD2 0.0826 (2.8 s) +00:10:42 zs_raw E_N[pc] sq 9.6304 (LB 444.975 UB 498.816 Dif 963.486) l2 7.3934 (4.0 s) +00:11:04 zs_raw E_N[all] sq 5.3662 (LB 259.996 UB 333.300 Dif 653.360) l2 4.3698 (22.8 s) +00:11:04 zs_raw done in 39 s +00:11:07 zs_cal: zs__cal.npz sha 866f20b3dbba (receipt verified), 18000 scored cells, 1800 in the P/C subsample (same rows as the scorer) +00:11:10 zs_cal [R1 raw] P/C k10 0.9994/0.9367 k5 0.9839/0.8456 k3 0.9611/0.7633 | AUC knn 0.870 rf 0.978 | 1-NN 0.746 | MMD2 0.0240 (3.3 s) +00:11:13 zs_cal [R1 dm] P/C k10 0.9911/0.9267 k5 0.9578/0.8417 k3 0.9217/0.7522 | AUC knn 0.875 rf 0.965 | 1-NN 0.746 | MMD2 0.0198 (3.1 s) +00:11:17 zs_cal [R2 raw] AUC knn 0.947 rf 0.949 | 1-NN 0.873 | MMD2 0.0223 (3.0 s) +00:11:19 zs_cal [R2 dm] AUC knn 0.930 rf 0.941 | 1-NN 0.833 | MMD2 0.0201 (2.9 s) +00:11:24 zs_cal E_N[pc] sq 2.0462 (LB 452.235 UB 547.992 Dif 648.177) l2 1.8584 (4.0 s) +00:11:51 zs_cal E_N[all] sq 2.8015 (LB 269.971 UB 337.001 Dif 457.758) l2 2.4907 (26.9 s) +00:11:51 zs_cal done in 46 s +00:11:53 lora5: lora__raw.npz sha 79482e9fe805 (receipt verified), 18000 scored cells, 1800 in the P/C subsample (same rows as the scorer) +00:11:57 lora5 [R1 raw] P/C k10 1.0000/0.9533 k5 0.9944/0.8817 k3 0.9844/0.7989 | AUC knn 0.833 rf 0.970 | 1-NN 0.714 | MMD2 0.0278 (3.7 s) +00:12:00 lora5 [R1 dm] P/C k10 0.9928/0.9711 k5 0.9689/0.9106 k3 0.9383/0.8189 | AUC knn 0.814 rf 0.922 | 1-NN 0.696 | MMD2 0.0105 (3.7 s) +00:12:03 lora5 [R2 raw] AUC knn 0.902 rf 0.909 | 1-NN 0.802 | MMD2 0.0233 (3.0 s) +00:12:07 lora5 [R2 dm] AUC knn 0.825 rf 0.868 | 1-NN 0.703 | MMD2 0.0092 (3.1 s) +00:12:11 lora5 E_N[pc] sq 1.5975 (LB 469.438 UB 554.593 Dif 605.473) l2 1.5609 (4.1 s) +00:12:33 lora5 E_N[all] sq 1.9476 (LB 274.608 UB 338.218 Dif 398.495) l2 1.8519 (22.0 s) +00:12:33 lora5 done in 42 s +00:12:33 zs_pseudo: zs__pseudo_all.npz sha b77ee477b7f9 (receipt verified), 18000 scored cells, 1800 in the P/C subsample (same rows as the scorer) +00:12:37 zs_pseudo [R1 raw] P/C k10 0.9983/0.9144 k5 0.9900/0.8322 k3 0.9783/0.7589 | AUC knn 0.861 rf 0.974 | 1-NN 0.729 | MMD2 0.0228 (3.6 s) +00:12:40 zs_pseudo [R1 dm] P/C k10 0.9844/0.9494 k5 0.9622/0.8867 k3 0.9261/0.8056 | AUC knn 0.849 rf 0.926 | 1-NN 0.707 | MMD2 0.0158 (3.3 s) +00:12:44 zs_pseudo [R2 raw] AUC knn 0.930 rf 0.936 | 1-NN 0.830 | MMD2 0.0195 (3.0 s) +00:12:47 zs_pseudo [R2 dm] AUC knn 0.863 rf 0.881 | 1-NN 0.749 | MMD2 0.0155 (3.1 s) +00:12:52 zs_pseudo E_N[pc] sq 1.1840 (LB 446.802 UB 571.814 Dif 594.818) l2 1.1668 (5.5 s) +00:13:16 zs_pseudo E_N[all] sq 2.1605 (LB 272.417 UB 338.195 Dif 414.528) l2 2.0211 (23.5 s) +00:13:16 zs_pseudo done in 43 s +00:13:17 scsemi5: scsemi5__raw.npz sha f65ee42f5475 (receipt verified), 18000 scored cells, 1800 in the P/C subsample (same rows as the scorer) +00:13:20 scsemi5 [R1 raw] P/C k10 0.9928/0.5789 k5 0.9594/0.4522 k3 0.9000/0.3583 | AUC knn 0.967 rf 0.999 | 1-NN 0.914 | MMD2 0.0676 (2.5 s) +00:13:22 scsemi5 [R1 dm] P/C k10 0.3856/0.2339 k5 0.2594/0.1567 k3 0.1994/0.1128 | AUC knn 0.997 rf 0.999 | 1-NN 0.975 | MMD2 0.0838 (2.4 s) +00:13:25 scsemi5 [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.988 | MMD2 0.0671 (2.3 s) +00:13:27 scsemi5 [R2 dm] AUC knn 0.998 rf 0.999 | 1-NN 0.984 | MMD2 0.0853 (2.4 s) +00:13:30 scsemi5 E_N[pc] sq 1.2306 (LB 365.811 UB 603.948 Dif 658.864) l2 1.1907 (3.4 s) +00:13:55 scsemi5 E_N[all] sq 3.5863 (LB 259.896 UB 336.870 Dif 535.944) l2 3.0845 (24.3 s) +00:13:55 scsemi5 done in 39 s +00:13:55 unit draw2 of giroux2022 written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/giroux2022/fewshot_n5/draw2 in 257.4 s (k=10 max |diff| vs scorer 0.00e+00) +00:13:55 giroux2022 fewshot draw3 : 11 scored samples; fitting the scorer's view +00:13:55 bandwidth m (median pairwise distance of R1, PCA-50) = 33.2201 +00:13:55 observed cells: 118953 in 11 samples; R1/R2 rebuilt = reference.npz; R3 1650 cells (0 samples with fewer than n) +00:14:06 real_R2 [R1 raw] P/C k10 0.9988/1.0000 k5 0.9958/1.0000 k3 0.9891/0.9964 | AUC knn 0.581 rf 0.933 | 1-NN 0.525 | MMD2 0.0021 (3.8 s) +00:14:10 real_R2 [R1 dm] P/C k10 0.9994/1.0000 k5 0.9970/0.9994 k3 0.9891/0.9970 | AUC knn 0.591 rf 0.929 | 1-NN 0.532 | MMD2 0.0021 (3.8 s) +00:14:13 real_R3 [R2 raw] AUC knn 0.487 rf 0.494 | 1-NN 0.488 | MMD2 -0.0000 (3.1 s) +00:14:16 real_R3 [R2 dm] AUC knn 0.488 rf 0.491 | 1-NN 0.491 | MMD2 -0.0001 (2.9 s) +00:14:20 real_R2 E_N[pc] sq 0.3181 (LB 441.471 UB 582.909 Dif 486.466) l2 0.3182 (3.9 s) +00:14:41 real_R2 E_N[all] sq 0.1406 (LB 275.338 UB 368.620 Dif 288.449) l2 0.1379 (17.7 s) +00:14:42 zs_raw: zs__raw_all.npz sha 16b110e1effd (receipt verified), 16500 scored cells, 1650 in the P/C subsample (same rows as the scorer) +00:14:44 zs_raw [R1 raw] P/C k10 0.9667/0.4042 k5 0.9267/0.3188 k3 0.8655/0.2630 | AUC knn 0.968 rf 0.998 | 1-NN 0.916 | MMD2 0.1098 (2.5 s) +00:14:47 zs_raw [R1 dm] P/C k10 0.9927/0.4824 k5 0.9776/0.3673 k3 0.9436/0.3018 | AUC knn 0.940 rf 0.998 | 1-NN 0.893 | MMD2 0.0863 (2.8 s) +00:14:50 zs_raw [R2 raw] AUC knn 0.996 rf 0.997 | 1-NN 0.972 | MMD2 0.1118 (2.6 s) +00:14:53 zs_raw [R2 dm] AUC knn 0.991 rf 0.994 | 1-NN 0.961 | MMD2 0.0854 (2.7 s) +00:14:58 zs_raw E_N[pc] sq 13.0689 (LB 460.770 UB 501.828 Dif 997.356) l2 10.0118 (5.1 s) +00:15:25 zs_raw E_N[all] sq 5.6939 (LB 266.751 UB 338.075 Dif 672.861) l2 4.6731 (27.6 s) +00:15:25 zs_raw done in 44 s +00:15:28 zs_cal: zs__cal.npz sha 4f67667025b1 (receipt verified), 16500 scored cells, 1650 in the P/C subsample (same rows as the scorer) +00:15:31 zs_cal [R1 raw] P/C k10 0.9915/0.9448 k5 0.9764/0.8776 k3 0.9455/0.7830 | AUC knn 0.881 rf 0.978 | 1-NN 0.737 | MMD2 0.0329 (3.4 s) +00:15:34 zs_cal [R1 dm] P/C k10 0.9806/0.9303 k5 0.9576/0.8570 k3 0.9194/0.7515 | AUC knn 0.899 rf 0.963 | 1-NN 0.755 | MMD2 0.0264 (3.3 s) +00:15:38 zs_cal [R2 raw] AUC knn 0.948 rf 0.953 | 1-NN 0.862 | MMD2 0.0314 (2.9 s) +00:15:41 zs_cal [R2 dm] AUC knn 0.931 rf 0.943 | 1-NN 0.823 | MMD2 0.0267 (3.0 s) +00:15:46 zs_cal E_N[pc] sq 2.3312 (LB 471.066 UB 558.235 Dif 674.278) l2 2.1275 (5.4 s) +00:16:11 zs_cal E_N[all] sq 3.0021 (LB 276.727 UB 341.768 Dif 471.987) l2 2.6863 (25.0 s) +00:16:11 zs_cal done in 46 s +00:16:13 lora5: lora__raw.npz sha 493a134f9f90 (receipt verified), 16500 scored cells, 1650 in the P/C subsample (same rows as the scorer) +00:16:17 lora5 [R1 raw] P/C k10 0.9994/0.9624 k5 0.9939/0.9085 k3 0.9794/0.8261 | AUC knn 0.827 rf 0.975 | 1-NN 0.697 | MMD2 0.0267 (3.3 s) +00:16:20 lora5 [R1 dm] P/C k10 0.9952/0.9691 k5 0.9800/0.9042 k3 0.9400/0.8303 | AUC knn 0.817 rf 0.923 | 1-NN 0.690 | MMD2 0.0086 (3.0 s) +00:16:23 lora5 [R2 raw] AUC knn 0.891 rf 0.911 | 1-NN 0.794 | MMD2 0.0218 (2.7 s) +00:16:25 lora5 [R2 dm] AUC knn 0.825 rf 0.866 | 1-NN 0.725 | MMD2 0.0072 (2.8 s) +00:16:30 lora5 E_N[pc] sq 1.7394 (LB 483.823 UB 562.248 Dif 620.236) l2 1.7412 (4.8 s) +00:16:54 lora5 E_N[all] sq 2.0301 (LB 281.427 UB 342.897 Dif 406.218) l2 1.9486 (23.9 s) +00:16:54 lora5 done in 43 s +00:16:55 zs_pseudo: zs__pseudo_all.npz sha b77ee477b7f9 (receipt verified), 16500 scored cells, 1650 in the P/C subsample (same rows as the scorer) +00:16:58 zs_pseudo [R1 raw] P/C k10 0.9921/0.9297 k5 0.9788/0.8618 k3 0.9600/0.7915 | AUC knn 0.853 rf 0.977 | 1-NN 0.713 | MMD2 0.0255 (3.5 s) +00:17:01 zs_pseudo [R1 dm] P/C k10 0.9794/0.9521 k5 0.9552/0.9006 k3 0.9194/0.8188 | AUC knn 0.849 rf 0.934 | 1-NN 0.709 | MMD2 0.0190 (2.6 s) +00:17:03 zs_pseudo [R2 raw] AUC knn 0.928 rf 0.946 | 1-NN 0.833 | MMD2 0.0233 (2.3 s) +00:17:06 zs_pseudo [R2 dm] AUC knn 0.870 rf 0.897 | 1-NN 0.761 | MMD2 0.0201 (2.4 s) +00:17:10 zs_pseudo E_N[pc] sq 1.3347 (LB 465.975 UB 576.184 Dif 613.070) l2 1.3400 (4.6 s) +00:17:34 zs_pseudo E_N[all] sq 2.2330 (LB 279.929 UB 343.016 Dif 420.800) l2 2.1186 (23.6 s) +00:17:34 zs_pseudo done in 40 s +00:17:35 scsemi5: scsemi5__raw.npz sha 0d75cfbab0da (receipt verified), 16500 scored cells, 1650 in the P/C subsample (same rows as the scorer) +00:17:38 scsemi5 [R1 raw] P/C k10 0.9891/0.6291 k5 0.9418/0.4727 k3 0.8655/0.3733 | AUC knn 0.967 rf 0.999 | 1-NN 0.907 | MMD2 0.0692 (2.6 s) +00:17:41 scsemi5 [R1 dm] P/C k10 0.4418/0.2321 k5 0.3115/0.1491 k3 0.2145/0.1042 | AUC knn 0.995 rf 0.999 | 1-NN 0.974 | MMD2 0.0875 (2.8 s) +00:17:44 scsemi5 [R2 raw] AUC knn 0.997 rf 0.998 | 1-NN 0.985 | MMD2 0.0694 (2.6 s) +00:17:46 scsemi5 [R2 dm] AUC knn 0.996 rf 0.999 | 1-NN 0.981 | MMD2 0.0895 (2.6 s) +00:17:53 scsemi5 E_N[pc] sq 1.2351 (LB 376.841 UB 618.053 Dif 674.762) l2 1.1928 (6.5 s) +00:18:14 scsemi5 E_N[all] sq 3.7792 (LB 266.279 UB 341.111 Dif 549.088) l2 3.2574 (21.5 s) +00:18:14 scsemi5 done in 40 s +00:18:14 unit draw3 of giroux2022 written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/giroux2022/fewshot_n5/draw3 in 259.5 s (k=10 max |diff| vs scorer 0.00e+00) +00:18:14 giroux2022 fewshot draw4 : 10 scored samples; fitting the scorer's view +00:18:15 bandwidth m (median pairwise distance of R1, PCA-50) = 33.2381 +00:18:15 observed cells: 101336 in 10 samples; R1/R2 rebuilt = reference.npz; R3 1500 cells (0 samples with fewer than n) +00:18:25 real_R2 [R1 raw] P/C k10 0.9993/1.0000 k5 0.9967/0.9993 k3 0.9913/0.9953 | AUC knn 0.595 rf 0.938 | 1-NN 0.531 | MMD2 0.0023 (3.3 s) +00:18:28 real_R2 [R1 dm] P/C k10 0.9987/1.0000 k5 0.9967/1.0000 k3 0.9940/0.9960 | AUC knn 0.586 rf 0.933 | 1-NN 0.533 | MMD2 0.0022 (3.6 s) +00:18:31 real_R3 [R2 raw] AUC knn 0.498 rf 0.510 | 1-NN 0.501 | MMD2 -0.0000 (2.8 s) +00:18:34 real_R3 [R2 dm] AUC knn 0.498 rf 0.505 | 1-NN 0.496 | MMD2 0.0000 (2.7 s) +00:18:37 real_R2 E_N[pc] sq 0.3130 (LB 467.090 UB 610.730 Dif 512.044) l2 0.3040 (3.5 s) +00:18:57 real_R2 E_N[all] sq 0.1731 (LB 280.186 UB 357.041 Dif 293.492) l2 0.1698 (16.5 s) +00:18:57 zs_raw: zs__raw_all.npz sha 16b110e1effd (receipt verified), 15000 scored cells, 1500 in the P/C subsample (same rows as the scorer) +00:19:00 zs_raw [R1 raw] P/C k10 0.9820/0.5493 k5 0.9200/0.4333 k3 0.8493/0.3593 | AUC knn 0.953 rf 0.996 | 1-NN 0.889 | MMD2 0.0974 (2.6 s) +00:19:03 zs_raw [R1 dm] P/C k10 0.9947/0.6613 k5 0.9633/0.5340 k3 0.9173/0.4527 | AUC knn 0.903 rf 0.997 | 1-NN 0.847 | MMD2 0.0586 (2.8 s) +00:19:06 zs_raw [R2 raw] AUC knn 0.991 rf 0.996 | 1-NN 0.968 | MMD2 0.1043 (2.6 s) +00:19:08 zs_raw [R2 dm] AUC knn 0.986 rf 0.991 | 1-NN 0.949 | MMD2 0.0595 (2.6 s) +00:19:14 zs_raw E_N[pc] sq 7.8164 (LB 477.515 UB 539.974 Dif 965.722) l2 6.2206 (6.0 s) +00:19:34 zs_raw E_N[all] sq 3.7601 (LB 271.519 UB 365.252 Dif 623.966) l2 3.2215 (19.9 s) +00:19:34 zs_raw done in 38 s +00:19:36 zs_cal: zs__cal.npz sha 064ed3f0c695 (receipt verified), 15000 scored cells, 1500 in the P/C subsample (same rows as the scorer) +00:19:39 zs_cal [R1 raw] P/C k10 1.0000/0.9687 k5 0.9973/0.8940 k3 0.9887/0.8147 | AUC knn 0.837 rf 0.976 | 1-NN 0.704 | MMD2 0.0236 (2.8 s) +00:19:42 zs_cal [R1 dm] P/C k10 0.9960/0.9733 k5 0.9827/0.8967 k3 0.9620/0.8007 | AUC knn 0.851 rf 0.962 | 1-NN 0.717 | MMD2 0.0228 (3.0 s) +00:19:45 zs_cal [R2 raw] AUC knn 0.935 rf 0.943 | 1-NN 0.842 | MMD2 0.0211 (2.7 s) +00:19:48 zs_cal [R2 dm] AUC knn 0.924 rf 0.933 | 1-NN 0.829 | MMD2 0.0226 (2.6 s) +00:19:52 zs_cal E_N[pc] sq 1.5223 (LB 484.261 UB 591.831 Dif 648.015) l2 1.4347 (4.2 s) +00:20:10 zs_cal E_N[all] sq 1.7308 (LB 281.770 UB 368.643 Dif 432.132) l2 1.6315 (18.2 s) +00:20:10 zs_cal done in 36 s +00:20:12 lora5: lora__raw.npz sha 8fac3c12b5bc (receipt verified), 15000 scored cells, 1500 in the P/C subsample (same rows as the scorer) +00:20:16 lora5 [R1 raw] P/C k10 0.9993/0.9767 k5 0.9953/0.9387 k3 0.9907/0.8907 | AUC knn 0.784 rf 0.965 | 1-NN 0.656 | MMD2 0.0147 (3.4 s) +00:20:19 lora5 [R1 dm] P/C k10 0.9967/0.9933 k5 0.9853/0.9707 k3 0.9660/0.9233 | AUC knn 0.746 rf 0.932 | 1-NN 0.632 | MMD2 0.0091 (3.1 s) +00:20:22 lora5 [R2 raw] AUC knn 0.878 rf 0.887 | 1-NN 0.766 | MMD2 0.0098 (2.7 s) +00:20:24 lora5 [R2 dm] AUC knn 0.815 rf 0.871 | 1-NN 0.710 | MMD2 0.0087 (2.6 s) +00:20:28 lora5 E_N[pc] sq 1.2276 (LB 496.226 UB 595.768 Dif 618.421) l2 1.2238 (4.0 s) +00:20:47 lora5 E_N[all] sq 1.3183 (LB 285.700 UB 369.412 Dif 396.055) l2 1.3013 (19.1 s) +00:20:47 lora5 done in 37 s +00:20:48 zs_pseudo: zs__pseudo_all.npz sha b77ee477b7f9 (receipt verified), 15000 scored cells, 1500 in the P/C subsample (same rows as the scorer) +00:20:51 zs_pseudo [R1 raw] P/C k10 1.0000/0.9267 k5 0.9993/0.8560 k3 0.9927/0.7773 | AUC knn 0.837 rf 0.978 | 1-NN 0.723 | MMD2 0.0256 (3.1 s) +00:20:54 zs_pseudo [R1 dm] P/C k10 0.9987/0.9607 k5 0.9907/0.8973 k3 0.9687/0.8213 | AUC knn 0.820 rf 0.944 | 1-NN 0.688 | MMD2 0.0218 (2.9 s) +00:20:57 zs_pseudo [R2 raw] AUC knn 0.930 rf 0.942 | 1-NN 0.845 | MMD2 0.0207 (2.6 s) +00:20:59 zs_pseudo [R2 dm] AUC knn 0.871 rf 0.911 | 1-NN 0.774 | MMD2 0.0212 (2.6 s) +00:21:03 zs_pseudo E_N[pc] sq 1.0880 (LB 476.645 UB 609.558 Dif 621.257) l2 1.0758 (3.3 s) +00:21:21 zs_pseudo E_N[all] sq 1.6373 (LB 283.410 UB 369.249 Dif 423.957) l2 1.5600 (18.2 s) +00:21:21 zs_pseudo done in 33 s +00:21:22 scsemi5: scsemi5__raw.npz sha 93e63e4411e9 (receipt verified), 15000 scored cells, 1500 in the P/C subsample (same rows as the scorer) +00:21:25 scsemi5 [R1 raw] P/C k10 0.9960/0.6313 k5 0.9580/0.5040 k3 0.8813/0.4127 | AUC knn 0.966 rf 0.999 | 1-NN 0.896 | MMD2 0.0778 (2.4 s) +00:21:27 scsemi5 [R1 dm] P/C k10 0.4893/0.2460 k5 0.3553/0.1473 k3 0.2627/0.1007 | AUC knn 0.993 rf 0.999 | 1-NN 0.974 | MMD2 0.0989 (2.6 s) +00:21:30 scsemi5 [R2 raw] AUC knn 0.998 rf 1.000 | 1-NN 0.989 | MMD2 0.0762 (2.5 s) +00:21:32 scsemi5 [R2 dm] AUC knn 0.998 rf 1.000 | 1-NN 0.986 | MMD2 0.1018 (2.5 s) +00:21:36 scsemi5 E_N[pc] sq 1.2263 (LB 392.629 UB 651.390 Dif 709.946) l2 1.1929 (3.7 s) +00:21:56 scsemi5 E_N[all] sq 3.0024 (LB 269.998 UB 368.381 Dif 565.382) l2 2.6362 (20.3 s) +00:21:56 scsemi5 done in 36 s +00:21:56 unit draw4 of giroux2022 written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/giroux2022/fewshot_n5/draw4 in 222.1 s (k=10 max |diff| vs scorer 0.00e+00) +JOB_EXIT 0 1225s --design fewshot --dataset giroux2022 --draws 0,1,2,3,4 --threads 6 +JOB_START 2026-10-02T00:21:56+09:00 --design fewshot --dataset ji2025_chili --draws 0,1,2,3,4 --threads 6 +00:21:57 ji2025_chili fewshot draw0 : 25 scored samples; fitting the scorer's view +00:21:58 bandwidth m (median pairwise distance of R1, PCA-50) = 29.4491 +00:22:00 observed cells: 89679 in 25 samples; R1/R2 rebuilt = reference.npz; R3 3750 cells (0 samples with fewer than n) +00:22:16 real_R2 [R1 raw] P/C k10 0.9960/1.0000 k5 0.9853/0.9976 k3 0.9672/0.9755 | AUC knn 0.556 rf 0.808 | 1-NN 0.538 | MMD2 0.0003 (8.6 s) +00:22:24 real_R2 [R1 dm] P/C k10 0.9957/1.0000 k5 0.9829/0.9968 k3 0.9653/0.9776 | AUC knn 0.554 rf 0.804 | 1-NN 0.535 | MMD2 0.0002 (8.8 s) +00:22:32 real_R3 [R2 raw] AUC knn 0.488 rf 0.499 | 1-NN 0.500 | MMD2 0.0001 (7.5 s) +00:22:40 real_R3 [R2 dm] AUC knn 0.492 rf 0.498 | 1-NN 0.507 | MMD2 0.0001 (7.4 s) +00:22:45 real_R2 E_N[pc] sq 0.2130 (LB 234.595 UB 360.526 Dif 261.423) l2 0.2299 (5.1 s) +00:23:01 real_R2 E_N[all] sq 0.0746 (LB 180.559 UB 264.040 Dif 186.789) l2 0.0735 (13.2 s) +00:23:08 zs_raw: zs__raw_all.npz sha 0d37cb4c8f0f (receipt verified), 37500 scored cells, 3750 in the P/C subsample (same rows as the scorer) +00:23:14 zs_raw [R1 raw] P/C k10 0.7957/0.0701 k5 0.4413/0.0443 k3 0.3640/0.0309 | AUC knn 0.996 rf 1.000 | 1-NN 0.991 | MMD2 0.2697 (5.5 s) +00:23:19 zs_raw [R1 dm] P/C k10 0.4389/0.2227 k5 0.2893/0.1371 k3 0.2120/0.0947 | AUC knn 0.994 rf 0.997 | 1-NN 0.976 | MMD2 0.1364 (5.5 s) +00:23:25 zs_raw [R2 raw] AUC knn 0.998 rf 1.000 | 1-NN 0.995 | MMD2 0.2737 (5.0 s) +00:23:30 zs_raw [R2 dm] AUC knn 0.996 rf 0.997 | 1-NN 0.978 | MMD2 0.1391 (5.4 s) +00:23:36 zs_raw E_N[pc] sq -14.8800 (LB 327.567 UB 292.211 Dif 853.660) l2 -11.9214 (6.3 s) +00:23:54 zs_raw E_N[all] sq 25.2809 (LB 209.181 UB 226.304 Dif 642.065) l2 15.5706 (17.2 s) +00:23:54 zs_raw done in 52 s +00:23:58 zs_cal: zs__cal.npz sha 3f9d71119d49 (receipt verified), 37500 scored cells, 3750 in the P/C subsample (same rows as the scorer) +00:24:05 zs_cal [R1 raw] P/C k10 0.7411/0.1059 k5 0.4741/0.0635 k3 0.3669/0.0464 | AUC knn 0.995 rf 0.999 | 1-NN 0.987 | MMD2 0.1323 (6.3 s) +00:24:11 zs_cal [R1 dm] P/C k10 0.6773/0.3619 k5 0.4832/0.2312 k3 0.3603/0.1611 | AUC knn 0.993 rf 0.994 | 1-NN 0.957 | MMD2 0.0465 (6.1 s) +00:24:17 zs_cal [R2 raw] AUC knn 0.998 rf 0.999 | 1-NN 0.993 | MMD2 0.1317 (5.6 s) +00:24:23 zs_cal [R2 dm] AUC knn 0.994 rf 0.994 | 1-NN 0.959 | MMD2 0.0461 (5.7 s) +00:24:29 zs_cal E_N[pc] sq 11.6955 (LB 283.986 UB 316.335 Dif 662.321) l2 10.9871 (6.5 s) +00:24:48 zs_cal E_N[all] sq 8.3157 (LB 195.045 UB 235.402 Dif 530.645) l2 6.5066 (18.8 s) +00:24:48 zs_cal done in 55 s +00:24:53 lora5: lora__raw.npz sha 422b47fc22d7 (receipt verified), 37500 scored cells, 3750 in the P/C subsample (same rows as the scorer) +00:25:00 lora5 [R1 raw] P/C k10 0.9712/0.6992 k5 0.8965/0.5552 k3 0.8195/0.4544 | AUC knn 0.948 rf 0.971 | 1-NN 0.857 | MMD2 0.0405 (6.6 s) +00:25:06 lora5 [R1 dm] P/C k10 0.9709/0.9347 k5 0.9040/0.8136 k3 0.8267/0.6867 | AUC knn 0.898 rf 0.928 | 1-NN 0.765 | MMD2 0.0121 (5.9 s) +00:25:12 lora5 [R2 raw] AUC knn 0.962 rf 0.960 | 1-NN 0.881 | MMD2 0.0384 (5.5 s) +00:25:17 lora5 [R2 dm] AUC knn 0.901 rf 0.920 | 1-NN 0.790 | MMD2 0.0118 (5.5 s) +00:25:23 lora5 E_N[pc] sq 2.2209 (LB 270.454 UB 340.341 Dif 425.668) l2 2.3052 (5.9 s) +00:25:40 lora5 E_N[all] sq 2.4155 (LB 194.165 UB 244.980 Dif 316.910) l2 2.2604 (16.8 s) +00:25:40 lora5 done in 52 s +00:25:46 zs_pseudo: zs__pseudo_all.npz sha d54f99d9b64e (receipt verified), 37500 scored cells, 3750 in the P/C subsample (same rows as the scorer) +00:25:54 zs_pseudo [R1 raw] P/C k10 0.9869/0.7520 k5 0.9544/0.6197 k3 0.9163/0.5141 | AUC knn 0.931 rf 0.980 | 1-NN 0.841 | MMD2 0.0261 (6.9 s) +00:26:00 zs_pseudo [R1 dm] P/C k10 0.9797/0.7979 k5 0.9520/0.6693 k3 0.9075/0.5541 | AUC knn 0.926 rf 0.976 | 1-NN 0.827 | MMD2 0.0226 (6.4 s) +00:26:06 zs_pseudo [R2 raw] AUC knn 0.959 rf 0.977 | 1-NN 0.891 | MMD2 0.0243 (5.6 s) +00:26:12 zs_pseudo [R2 dm] AUC knn 0.951 rf 0.975 | 1-NN 0.875 | MMD2 0.0218 (5.2 s) +00:26:20 zs_pseudo E_N[pc] sq 1.0923 (LB 220.999 UB 356.869 Dif 369.409) l2 1.1171 (8.1 s) +00:26:43 zs_pseudo E_N[all] sq 1.5553 (LB 169.966 UB 247.532 Dif 290.605) l2 1.4696 (22.8 s) +00:26:43 zs_pseudo done in 63 s +00:26:47 scsemi5: scsemi5__raw.npz sha b101434e186a (receipt verified), 37500 scored cells, 3750 in the P/C subsample (same rows as the scorer) +00:26:53 scsemi5 [R1 raw] P/C k10 0.7971/0.1517 k5 0.6059/0.1056 k3 0.4949/0.0803 | AUC knn 0.993 rf 0.999 | 1-NN 0.980 | MMD2 0.1638 (6.2 s) +00:26:59 scsemi5 [R1 dm] P/C k10 0.6843/0.1485 k5 0.4685/0.0928 k3 0.3312/0.0632 | AUC knn 0.996 rf 0.999 | 1-NN 0.987 | MMD2 0.1267 (6.0 s) +00:27:05 scsemi5 [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1636 (5.5 s) +00:27:11 scsemi5 [R2 dm] AUC knn 0.996 rf 0.999 | 1-NN 0.989 | MMD2 0.1264 (5.5 s) +00:27:17 scsemi5 E_N[pc] sq 2.2891 (LB 167.318 UB 355.978 Dif 599.186) l2 1.8901 (6.3 s) +00:27:38 scsemi5 E_N[all] sq 4.1726 (LB 143.170 UB 240.369 Dif 548.743) l2 2.9780 (20.7 s) +00:27:38 scsemi5 done in 55 s +00:27:38 unit draw0 of ji2025_chili written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ji2025_chili/fewshot_n5/draw0 in 341.0 s (k=10 max |diff| vs scorer 0.00e+00) +00:27:38 ji2025_chili fewshot draw1 : 26 scored samples; fitting the scorer's view +00:27:39 bandwidth m (median pairwise distance of R1, PCA-50) = 29.5773 +00:27:40 observed cells: 106230 in 26 samples; R1/R2 rebuilt = reference.npz; R3 3900 cells (0 samples with fewer than n) +00:27:57 real_R2 [R1 raw] P/C k10 0.9972/1.0000 k5 0.9885/0.9969 k3 0.9690/0.9772 | AUC knn 0.563 rf 0.807 | 1-NN 0.524 | MMD2 0.0002 (8.7 s) +00:28:06 real_R2 [R1 dm] P/C k10 0.9972/1.0000 k5 0.9877/0.9964 k3 0.9697/0.9754 | AUC knn 0.554 rf 0.801 | 1-NN 0.525 | MMD2 0.0002 (8.7 s) +00:28:13 real_R3 [R2 raw] AUC knn 0.493 rf 0.491 | 1-NN 0.493 | MMD2 0.0001 (6.8 s) +00:28:21 real_R3 [R2 dm] AUC knn 0.493 rf 0.492 | 1-NN 0.495 | MMD2 0.0000 (7.5 s) +00:28:26 real_R2 E_N[pc] sq 0.2446 (LB 241.635 UB 352.894 Dif 268.854) l2 0.2534 (5.1 s) +00:28:46 real_R2 E_N[all] sq 0.0880 (LB 185.104 UB 274.001 Dif 192.929) l2 0.0898 (16.4 s) +00:28:46 zs_raw: zs__raw_all.npz sha 0d37cb4c8f0f (receipt verified), 39000 scored cells, 3900 in the P/C subsample (same rows as the scorer) +00:28:52 zs_raw [R1 raw] P/C k10 0.7910/0.0674 k5 0.5192/0.0423 k3 0.4413/0.0310 | AUC knn 0.996 rf 1.000 | 1-NN 0.990 | MMD2 0.2722 (5.4 s) +00:28:58 zs_raw [R1 dm] P/C k10 0.5313/0.1954 k5 0.3505/0.1156 k3 0.2392/0.0785 | AUC knn 0.996 rf 0.998 | 1-NN 0.978 | MMD2 0.1409 (5.8 s) +00:29:04 zs_raw [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.2775 (5.3 s) +00:29:09 zs_raw [R2 dm] AUC knn 0.996 rf 0.998 | 1-NN 0.977 | MMD2 0.1422 (5.2 s) +00:29:15 zs_raw E_N[pc] sq -11.4373 (LB 332.068 UB 285.502 Dif 864.650) l2 -9.9659 (5.7 s) +00:29:34 zs_raw E_N[all] sq 13.8212 (LB 208.500 UB 240.262 Dif 647.479) l2 9.4814 (19.2 s) +00:29:34 zs_raw done in 48 s +00:29:39 zs_cal: zs__cal.npz sha 83f99ddd9abf (receipt verified), 39000 scored cells, 3900 in the P/C subsample (same rows as the scorer) +00:29:45 zs_cal [R1 raw] P/C k10 0.7785/0.1392 k5 0.5469/0.0923 k3 0.4400/0.0692 | AUC knn 0.995 rf 0.999 | 1-NN 0.981 | MMD2 0.1287 (6.0 s) +00:29:51 zs_cal [R1 dm] P/C k10 0.6485/0.3403 k5 0.4577/0.2254 k3 0.3359/0.1572 | AUC knn 0.993 rf 0.996 | 1-NN 0.960 | MMD2 0.0464 (5.9 s) +00:29:56 zs_cal [R2 raw] AUC knn 0.998 rf 0.999 | 1-NN 0.991 | MMD2 0.1299 (5.2 s) +00:30:02 zs_cal [R2 dm] AUC knn 0.995 rf 0.996 | 1-NN 0.966 | MMD2 0.0463 (5.8 s) +00:30:09 zs_cal E_N[pc] sq -158.7376 (LB 306.481 UB 304.124 Dif 680.593) l2 -293.2811 (6.5 s) +00:30:34 zs_cal E_N[all] sq 7.9405 (LB 203.235 UB 245.888 Dif 541.925) l2 6.1514 (25.0 s) +00:30:34 zs_cal done in 60 s +00:30:39 lora5: lora__raw.npz sha 5de9e6e7579e (receipt verified), 39000 scored cells, 3900 in the P/C subsample (same rows as the scorer) +00:30:47 lora5 [R1 raw] P/C k10 0.9903/0.8551 k5 0.9656/0.7531 k3 0.9238/0.6403 | AUC knn 0.910 rf 0.968 | 1-NN 0.793 | MMD2 0.0206 (7.2 s) +00:30:54 lora5 [R1 dm] P/C k10 0.9938/0.9169 k5 0.9638/0.8097 k3 0.9128/0.6992 | AUC knn 0.900 rf 0.958 | 1-NN 0.771 | MMD2 0.0148 (7.1 s) +00:31:00 lora5 [R2 raw] AUC knn 0.935 rf 0.955 | 1-NN 0.844 | MMD2 0.0197 (6.0 s) +00:31:06 lora5 [R2 dm] AUC knn 0.919 rf 0.947 | 1-NN 0.818 | MMD2 0.0147 (5.9 s) +00:31:12 lora5 E_N[pc] sq 1.2771 (LB 246.316 UB 342.413 Dif 369.039) l2 1.2674 (5.6 s) +00:31:32 lora5 E_N[all] sq 1.2435 (LB 182.812 UB 257.736 Dif 275.983) l2 1.2116 (19.8 s) +00:31:32 lora5 done in 58 s +00:31:32 zs_pseudo: zs__pseudo_all.npz sha d54f99d9b64e (receipt verified), 39000 scored cells, 3900 in the P/C subsample (same rows as the scorer) +00:31:40 zs_pseudo [R1 raw] P/C k10 0.9913/0.7149 k5 0.9674/0.5949 k3 0.9297/0.5005 | AUC knn 0.932 rf 0.986 | 1-NN 0.841 | MMD2 0.0280 (6.6 s) +00:31:46 zs_pseudo [R1 dm] P/C k10 0.9836/0.7659 k5 0.9531/0.6367 k3 0.9118/0.5387 | AUC knn 0.929 rf 0.981 | 1-NN 0.832 | MMD2 0.0248 (6.0 s) +00:31:51 zs_pseudo [R2 raw] AUC knn 0.962 rf 0.982 | 1-NN 0.894 | MMD2 0.0264 (5.2 s) +00:31:57 zs_pseudo [R2 dm] AUC knn 0.956 rf 0.979 | 1-NN 0.879 | MMD2 0.0239 (5.6 s) +00:32:03 zs_pseudo E_N[pc] sq 1.2245 (LB 224.254 UB 348.776 Dif 376.729) l2 1.2031 (5.8 s) +00:32:23 zs_pseudo E_N[all] sq 1.4681 (LB 173.344 UB 257.306 Dif 296.605) l2 1.3853 (20.5 s) +00:32:23 zs_pseudo done in 52 s +00:32:27 scsemi5: scsemi5__raw.npz sha facafaebc40b (receipt verified), 39000 scored cells, 3900 in the P/C subsample (same rows as the scorer) +00:32:34 scsemi5 [R1 raw] P/C k10 0.9215/0.1623 k5 0.7979/0.1267 k3 0.6810/0.1010 | AUC knn 0.990 rf 0.999 | 1-NN 0.973 | MMD2 0.1448 (6.5 s) +00:32:39 scsemi5 [R1 dm] P/C k10 0.6285/0.1844 k5 0.4662/0.1172 k3 0.3538/0.0838 | AUC knn 0.994 rf 0.999 | 1-NN 0.982 | MMD2 0.1080 (5.7 s) +00:32:45 scsemi5 [R2 raw] AUC knn 0.995 rf 0.999 | 1-NN 0.987 | MMD2 0.1476 (5.4 s) +00:32:51 scsemi5 [R2 dm] AUC knn 0.994 rf 0.999 | 1-NN 0.983 | MMD2 0.1091 (5.6 s) +00:32:55 scsemi5 E_N[pc] sq 2.2386 (LB 170.666 UB 347.250 Dif 565.965) l2 1.8497 (4.7 s) +00:33:14 scsemi5 E_N[all] sq 3.6181 (LB 147.996 UB 251.341 Dif 521.910) l2 2.6781 (19.1 s) +00:33:14 scsemi5 done in 51 s +00:33:14 unit draw1 of ji2025_chili written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ji2025_chili/fewshot_n5/draw1 in 336.5 s (k=10 max |diff| vs scorer 0.00e+00) +00:33:15 ji2025_chili fewshot draw2 : 26 scored samples; fitting the scorer's view +00:33:16 bandwidth m (median pairwise distance of R1, PCA-50) = 29.9090 +00:33:16 observed cells: 95826 in 26 samples; R1/R2 rebuilt = reference.npz; R3 3900 cells (0 samples with fewer than n) +00:33:32 real_R2 [R1 raw] P/C k10 0.9969/1.0000 k5 0.9885/0.9974 k3 0.9726/0.9815 | AUC knn 0.559 rf 0.807 | 1-NN 0.524 | MMD2 0.0002 (8.4 s) +00:33:40 real_R2 [R1 dm] P/C k10 0.9972/1.0000 k5 0.9892/0.9985 k3 0.9713/0.9803 | AUC knn 0.560 rf 0.802 | 1-NN 0.525 | MMD2 0.0002 (8.9 s) +00:33:49 real_R3 [R2 raw] AUC knn 0.498 rf 0.481 | 1-NN 0.489 | MMD2 -0.0001 (7.6 s) +00:33:56 real_R3 [R2 dm] AUC knn 0.492 rf 0.490 | 1-NN 0.488 | MMD2 -0.0001 (7.6 s) +00:34:02 real_R2 E_N[pc] sq 0.2028 (LB 230.648 UB 365.470 Dif 257.990) l2 0.2125 (5.4 s) +00:34:20 real_R2 E_N[all] sq 0.0947 (LB 176.782 UB 255.792 Dif 184.265) l2 0.0974 (14.6 s) +00:34:21 zs_raw: zs__raw_all.npz sha 0d37cb4c8f0f (receipt verified), 39000 scored cells, 3900 in the P/C subsample (same rows as the scorer) +00:34:27 zs_raw [R1 raw] P/C k10 0.8151/0.0590 k5 0.6279/0.0400 k3 0.4195/0.0300 | AUC knn 0.997 rf 1.000 | 1-NN 0.990 | MMD2 0.2731 (5.5 s) +00:34:32 zs_raw [R1 dm] P/C k10 0.4323/0.1913 k5 0.2869/0.1177 k3 0.2028/0.0862 | AUC knn 0.995 rf 0.997 | 1-NN 0.974 | MMD2 0.1368 (5.7 s) +00:34:38 zs_raw [R2 raw] AUC knn 0.999 rf 0.999 | 1-NN 0.996 | MMD2 0.2746 (5.3 s) +00:34:43 zs_raw [R2 dm] AUC knn 0.996 rf 0.997 | 1-NN 0.977 | MMD2 0.1378 (5.2 s) +00:34:50 zs_raw E_N[pc] sq -17.0904 (LB 326.853 UB 295.332 Dif 865.559) l2 -16.4842 (6.1 s) +00:35:09 zs_raw E_N[all] sq 56.0985 (LB 207.154 UB 215.090 Dif 652.365) l2 26.9476 (19.1 s) +00:35:09 zs_raw done in 48 s +00:35:13 zs_cal: zs__cal.npz sha 76f8f755e9ee (receipt verified), 39000 scored cells, 3900 in the P/C subsample (same rows as the scorer) +00:35:20 zs_cal [R1 raw] P/C k10 0.8069/0.1085 k5 0.6021/0.0721 k3 0.4382/0.0541 | AUC knn 0.995 rf 0.999 | 1-NN 0.986 | MMD2 0.1378 (5.9 s) +00:35:25 zs_cal [R1 dm] P/C k10 0.6321/0.3631 k5 0.4390/0.2374 k3 0.3221/0.1656 | AUC knn 0.991 rf 0.993 | 1-NN 0.953 | MMD2 0.0390 (5.3 s) +00:35:30 zs_cal [R2 raw] AUC knn 0.998 rf 0.999 | 1-NN 0.992 | MMD2 0.1368 (4.9 s) +00:35:35 zs_cal [R2 dm] AUC knn 0.993 rf 0.993 | 1-NN 0.960 | MMD2 0.0390 (5.1 s) +00:35:41 zs_cal E_N[pc] sq 17.5019 (LB 292.813 UB 314.957 Dif 680.387) l2 13.3612 (5.6 s) +00:35:59 zs_cal E_N[all] sq 13.7659 (LB 196.884 UB 221.664 Dif 538.000) l2 10.0434 (17.8 s) +00:35:59 zs_cal done in 50 s +00:36:04 lora5: lora__raw.npz sha e9f100e2a314 (receipt verified), 39000 scored cells, 3900 in the P/C subsample (same rows as the scorer) +00:36:11 lora5 [R1 raw] P/C k10 0.9654/0.5297 k5 0.8797/0.4041 k3 0.7805/0.3182 | AUC knn 0.966 rf 0.978 | 1-NN 0.901 | MMD2 0.0682 (6.8 s) +00:36:17 lora5 [R1 dm] P/C k10 0.9508/0.8674 k5 0.8600/0.7421 k3 0.7515/0.6144 | AUC knn 0.900 rf 0.919 | 1-NN 0.784 | MMD2 0.0166 (6.1 s) +00:36:22 lora5 [R2 raw] AUC knn 0.975 rf 0.972 | 1-NN 0.913 | MMD2 0.0658 (5.2 s) +00:36:28 lora5 [R2 dm] AUC knn 0.901 rf 0.918 | 1-NN 0.785 | MMD2 0.0165 (5.6 s) +00:36:35 lora5 E_N[pc] sq 2.7821 (LB 273.956 UB 342.082 Dif 463.490) l2 2.6546 (6.9 s) +00:36:57 lora5 E_N[all] sq 4.3110 (LB 194.563 UB 231.420 Dif 353.454) l2 3.7869 (21.4 s) +00:36:57 lora5 done in 58 s +00:36:57 zs_pseudo: zs__pseudo_all.npz sha d54f99d9b64e (receipt verified), 39000 scored cells, 3900 in the P/C subsample (same rows as the scorer) +00:37:04 zs_pseudo [R1 raw] P/C k10 0.9828/0.6969 k5 0.9464/0.5738 k3 0.8818/0.4782 | AUC knn 0.942 rf 0.983 | 1-NN 0.858 | MMD2 0.0279 (6.7 s) +00:37:11 zs_pseudo [R1 dm] P/C k10 0.9751/0.7451 k5 0.9308/0.6174 k3 0.8703/0.5090 | AUC knn 0.939 rf 0.980 | 1-NN 0.849 | MMD2 0.0238 (6.5 s) +00:37:17 zs_pseudo [R2 raw] AUC knn 0.963 rf 0.980 | 1-NN 0.897 | MMD2 0.0264 (6.0 s) +00:37:24 zs_pseudo [R2 dm] AUC knn 0.954 rf 0.978 | 1-NN 0.885 | MMD2 0.0230 (6.1 s) +00:37:29 zs_pseudo E_N[pc] sq 1.0650 (LB 217.677 UB 359.913 Dif 369.161) l2 1.0609 (5.9 s) +00:37:53 zs_pseudo E_N[all] sq 1.8418 (LB 166.591 UB 234.244 Dif 291.191) l2 1.7008 (23.6 s) +00:37:53 zs_pseudo done in 57 s +00:37:57 scsemi5: scsemi5__raw.npz sha d1f29012e7ad (receipt verified), 39000 scored cells, 3900 in the P/C subsample (same rows as the scorer) +00:38:03 scsemi5 [R1 raw] P/C k10 0.8292/0.1105 k5 0.6626/0.0774 k3 0.5226/0.0582 | AUC knn 0.993 rf 1.000 | 1-NN 0.986 | MMD2 0.1572 (5.9 s) +00:38:09 scsemi5 [R1 dm] P/C k10 0.4269/0.1221 k5 0.2787/0.0733 k3 0.2067/0.0492 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1205 (5.4 s) +00:38:15 scsemi5 [R2 raw] AUC knn 0.996 rf 0.999 | 1-NN 0.994 | MMD2 0.1563 (5.3 s) +00:38:20 scsemi5 [R2 dm] AUC knn 0.996 rf 0.999 | 1-NN 0.992 | MMD2 0.1216 (5.0 s) +00:38:27 scsemi5 E_N[pc] sq 2.3328 (LB 170.890 UB 355.260 Dif 600.989) l2 1.9344 (7.1 s) +00:38:48 scsemi5 E_N[all] sq 4.9034 (LB 143.306 UB 227.003 Dif 553.703) l2 3.4873 (20.9 s) +00:38:48 scsemi5 done in 54 s +00:38:48 unit draw2 of ji2025_chili written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ji2025_chili/fewshot_n5/draw2 in 333.2 s (k=10 max |diff| vs scorer 0.00e+00) +00:38:48 ji2025_chili fewshot draw3 : 25 scored samples; fitting the scorer's view +00:38:49 bandwidth m (median pairwise distance of R1, PCA-50) = 29.7673 +00:38:49 observed cells: 95151 in 25 samples; R1/R2 rebuilt = reference.npz; R3 3750 cells (0 samples with fewer than n) +00:39:05 real_R2 [R1 raw] P/C k10 0.9965/1.0000 k5 0.9899/0.9992 k3 0.9736/0.9845 | AUC knn 0.546 rf 0.811 | 1-NN 0.513 | MMD2 0.0002 (8.2 s) +00:39:14 real_R2 [R1 dm] P/C k10 0.9963/1.0000 k5 0.9896/0.9995 k3 0.9720/0.9859 | AUC knn 0.549 rf 0.802 | 1-NN 0.518 | MMD2 0.0002 (8.7 s) +00:39:21 real_R3 [R2 raw] AUC knn 0.493 rf 0.501 | 1-NN 0.500 | MMD2 -0.0000 (7.0 s) +00:39:28 real_R3 [R2 dm] AUC knn 0.497 rf 0.505 | 1-NN 0.497 | MMD2 -0.0001 (6.5 s) +00:39:33 real_R2 E_N[pc] sq 0.1955 (LB 234.008 UB 372.578 Dif 261.097) l2 0.2043 (5.0 s) +00:39:50 real_R2 E_N[all] sq 0.0745 (LB 181.123 UB 253.031 Dif 186.479) l2 0.0694 (13.8 s) +00:39:51 zs_raw: zs__raw_all.npz sha 0d37cb4c8f0f (receipt verified), 37500 scored cells, 3750 in the P/C subsample (same rows as the scorer) +00:39:56 zs_raw [R1 raw] P/C k10 0.7803/0.0635 k5 0.5968/0.0413 k3 0.3797/0.0328 | AUC knn 0.998 rf 1.000 | 1-NN 0.991 | MMD2 0.2675 (5.1 s) +00:40:02 zs_raw [R1 dm] P/C k10 0.4496/0.1792 k5 0.2907/0.1128 k3 0.1997/0.0760 | AUC knn 0.997 rf 0.998 | 1-NN 0.981 | MMD2 0.1404 (5.5 s) +00:40:07 zs_raw [R2 raw] AUC knn 0.998 rf 0.999 | 1-NN 0.996 | MMD2 0.2670 (5.4 s) +00:40:12 zs_raw [R2 dm] AUC knn 0.996 rf 0.998 | 1-NN 0.978 | MMD2 0.1390 (5.1 s) +00:40:17 zs_raw E_N[pc] sq -19.4663 (LB 329.032 UB 301.980 Dif 855.633) l2 -19.2731 (4.9 s) +00:40:36 zs_raw E_N[all] sq 30.4471 (LB 207.858 UB 222.130 Dif 642.380) l2 18.4776 (18.3 s) +00:40:36 zs_raw done in 46 s +00:40:40 zs_cal: zs__cal.npz sha b1453ae6eb36 (receipt verified), 37500 scored cells, 3750 in the P/C subsample (same rows as the scorer) +00:40:46 zs_cal [R1 raw] P/C k10 0.8083/0.1080 k5 0.5960/0.0731 k3 0.4069/0.0568 | AUC knn 0.996 rf 0.999 | 1-NN 0.985 | MMD2 0.1441 (6.3 s) +00:40:52 zs_cal [R1 dm] P/C k10 0.6067/0.3275 k5 0.4221/0.2069 k3 0.2949/0.1405 | AUC knn 0.994 rf 0.994 | 1-NN 0.962 | MMD2 0.0426 (5.8 s) +00:40:58 zs_cal [R2 raw] AUC knn 0.998 rf 0.999 | 1-NN 0.993 | MMD2 0.1429 (5.5 s) +00:41:04 zs_cal [R2 dm] AUC knn 0.993 rf 0.994 | 1-NN 0.961 | MMD2 0.0426 (5.3 s) +00:41:09 zs_cal E_N[pc] sq 12.4585 (LB 292.333 UB 324.164 Dif 688.902) l2 9.9079 (5.1 s) +00:41:33 zs_cal E_N[all] sq 10.8318 (LB 197.045 UB 228.467 Dif 537.407) l2 8.2715 (23.7 s) +00:41:33 zs_cal done in 57 s +00:41:38 lora5: lora__raw.npz sha fbeedb60ff9d (receipt verified), 37500 scored cells, 3750 in the P/C subsample (same rows as the scorer) +00:41:45 lora5 [R1 raw] P/C k10 0.9792/0.7587 k5 0.9312/0.6200 k3 0.8541/0.5099 | AUC knn 0.936 rf 0.965 | 1-NN 0.832 | MMD2 0.0229 (6.5 s) +00:41:51 lora5 [R1 dm] P/C k10 0.9755/0.9432 k5 0.9131/0.8317 k3 0.8411/0.7051 | AUC knn 0.900 rf 0.932 | 1-NN 0.761 | MMD2 0.0082 (6.3 s) +00:41:57 lora5 [R2 raw] AUC knn 0.951 rf 0.947 | 1-NN 0.866 | MMD2 0.0212 (5.3 s) +00:42:02 lora5 [R2 dm] AUC knn 0.898 rf 0.916 | 1-NN 0.788 | MMD2 0.0081 (5.1 s) +00:42:07 lora5 E_N[pc] sq 1.9259 (LB 275.768 UB 350.631 Dif 419.945) l2 1.9095 (5.3 s) +00:42:25 lora5 E_N[all] sq 2.6038 (LB 195.224 UB 239.185 Dif 309.690) l2 2.4632 (17.7 s) +00:42:25 lora5 done in 52 s +00:42:26 zs_pseudo: zs__pseudo_all.npz sha d54f99d9b64e (receipt verified), 37500 scored cells, 3750 in the P/C subsample (same rows as the scorer) +00:42:33 zs_pseudo [R1 raw] P/C k10 0.9893/0.7195 k5 0.9619/0.5861 k3 0.9096/0.4872 | AUC knn 0.941 rf 0.987 | 1-NN 0.856 | MMD2 0.0272 (6.4 s) +00:42:39 zs_pseudo [R1 dm] P/C k10 0.9816/0.7688 k5 0.9437/0.6349 k3 0.8901/0.5285 | AUC knn 0.938 rf 0.984 | 1-NN 0.847 | MMD2 0.0235 (5.7 s) +00:42:44 zs_pseudo [R2 raw] AUC knn 0.967 rf 0.983 | 1-NN 0.905 | MMD2 0.0259 (5.0 s) +00:42:50 zs_pseudo [R2 dm] AUC knn 0.956 rf 0.981 | 1-NN 0.885 | MMD2 0.0231 (5.5 s) +00:42:56 zs_pseudo E_N[pc] sq 1.0040 (LB 218.918 UB 367.614 Dif 368.214) l2 1.0144 (6.8 s) +00:43:20 zs_pseudo E_N[all] sq 1.6938 (LB 169.435 UB 241.024 Dif 290.692) l2 1.5904 (23.8 s) +00:43:20 zs_pseudo done in 55 s +00:43:23 scsemi5: scsemi5__raw.npz sha 2817c40764ce (receipt verified), 37500 scored cells, 3750 in the P/C subsample (same rows as the scorer) +00:43:30 scsemi5 [R1 raw] P/C k10 0.7904/0.1440 k5 0.6352/0.0995 k3 0.5200/0.0755 | AUC knn 0.993 rf 0.999 | 1-NN 0.982 | MMD2 0.1435 (6.0 s) +00:43:35 scsemi5 [R1 dm] P/C k10 0.5395/0.1283 k5 0.3741/0.0779 k3 0.2499/0.0560 | AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1049 (5.5 s) +00:43:41 scsemi5 [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.992 | MMD2 0.1435 (5.1 s) +00:43:46 scsemi5 [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1068 (5.4 s) +00:43:52 scsemi5 E_N[pc] sq 2.1044 (LB 166.028 UB 369.052 Dif 593.275) l2 1.7473 (5.6 s) +00:44:11 scsemi5 E_N[all] sq 4.4538 (LB 144.253 UB 234.062 Dif 544.243) l2 3.1709 (19.4 s) +00:44:11 scsemi5 done in 51 s +00:44:11 unit draw3 of ji2025_chili written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ji2025_chili/fewshot_n5/draw3 in 323.6 s (k=10 max |diff| vs scorer 0.00e+00) +00:44:11 ji2025_chili fewshot draw4 : 24 scored samples; fitting the scorer's view +00:44:12 bandwidth m (median pairwise distance of R1, PCA-50) = 30.0746 +00:44:13 observed cells: 86465 in 24 samples; R1/R2 rebuilt = reference.npz; R3 3600 cells (0 samples with fewer than n) +00:44:29 real_R2 [R1 raw] P/C k10 0.9975/1.0000 k5 0.9925/0.9981 k3 0.9800/0.9828 | AUC knn 0.562 rf 0.819 | 1-NN 0.530 | MMD2 0.0002 (7.7 s) +00:44:37 real_R2 [R1 dm] P/C k10 0.9972/1.0000 k5 0.9917/0.9983 k3 0.9750/0.9811 | AUC knn 0.559 rf 0.818 | 1-NN 0.523 | MMD2 0.0002 (8.0 s) +00:44:44 real_R3 [R2 raw] AUC knn 0.483 rf 0.475 | 1-NN 0.492 | MMD2 -0.0001 (6.9 s) +00:44:51 real_R3 [R2 dm] AUC knn 0.493 rf 0.483 | 1-NN 0.488 | MMD2 -0.0001 (6.9 s) +00:44:56 real_R2 E_N[pc] sq 0.1884 (LB 225.251 UB 360.285 Dif 250.697) l2 0.2022 (5.4 s) +00:45:15 real_R2 E_N[all] sq 0.0353 (LB 175.415 UB 255.963 Dif 178.260) l2 0.0328 (13.3 s) +00:45:16 zs_raw: zs__raw_all.npz sha 0d37cb4c8f0f (receipt verified), 36000 scored cells, 3600 in the P/C subsample (same rows as the scorer) +00:45:21 zs_raw [R1 raw] P/C k10 0.8119/0.0689 k5 0.6044/0.0419 k3 0.4539/0.0294 | AUC knn 0.997 rf 1.000 | 1-NN 0.993 | MMD2 0.2716 (5.1 s) +00:45:27 zs_raw [R1 dm] P/C k10 0.5497/0.2078 k5 0.3706/0.1236 k3 0.2628/0.0858 | AUC knn 0.996 rf 0.996 | 1-NN 0.973 | MMD2 0.1401 (5.2 s) +00:45:32 zs_raw [R2 raw] AUC knn 1.000 rf 1.000 | 1-NN 0.998 | MMD2 0.2741 (4.7 s) +00:45:37 zs_raw [R2 dm] AUC knn 0.996 rf 0.996 | 1-NN 0.977 | MMD2 0.1406 (4.8 s) +00:45:44 zs_raw E_N[pc] sq -15.0584 (LB 326.553 UB 291.039 Dif 861.333) l2 -14.3056 (7.1 s) +00:46:02 zs_raw E_N[all] sq 39.2836 (LB 206.204 UB 217.464 Dif 648.544) l2 20.8116 (18.8 s) +00:46:02 zs_raw done in 47 s +00:46:07 zs_cal: zs__cal.npz sha 9fa96848b31a (receipt verified), 36000 scored cells, 3600 in the P/C subsample (same rows as the scorer) +00:46:12 zs_cal [R1 raw] P/C k10 0.7775/0.1106 k5 0.5597/0.0769 k3 0.3936/0.0581 | AUC knn 0.997 rf 0.999 | 1-NN 0.986 | MMD2 0.1490 (5.5 s) +00:46:17 zs_cal [R1 dm] P/C k10 0.7253/0.3933 k5 0.5331/0.2506 k3 0.3958/0.1769 | AUC knn 0.989 rf 0.991 | 1-NN 0.947 | MMD2 0.0365 (4.9 s) +00:46:23 zs_cal [R2 raw] AUC knn 0.999 rf 0.999 | 1-NN 0.993 | MMD2 0.1500 (5.5 s) +00:46:28 zs_cal [R2 dm] AUC knn 0.992 rf 0.991 | 1-NN 0.955 | MMD2 0.0366 (5.2 s) +00:46:34 zs_cal E_N[pc] sq 12.8231 (LB 280.157 UB 312.421 Dif 693.880) l2 10.2584 (5.4 s) +00:46:53 zs_cal E_N[all] sq 11.0898 (LB 190.872 UB 222.950 Dif 546.618) l2 8.2618 (18.8 s) +00:46:53 zs_cal done in 50 s +00:46:57 lora5: lora__raw.npz sha f9bcc2da7a5f (receipt verified), 36000 scored cells, 3600 in the P/C subsample (same rows as the scorer) +00:47:04 lora5 [R1 raw] P/C k10 0.9828/0.6936 k5 0.9347/0.5625 k3 0.8694/0.4653 | AUC knn 0.936 rf 0.962 | 1-NN 0.847 | MMD2 0.0596 (6.7 s) +00:47:11 lora5 [R1 dm] P/C k10 0.9778/0.8783 k5 0.9331/0.7753 k3 0.8711/0.6692 | AUC knn 0.875 rf 0.917 | 1-NN 0.752 | MMD2 0.0302 (6.2 s) +00:47:17 lora5 [R2 raw] AUC knn 0.952 rf 0.947 | 1-NN 0.863 | MMD2 0.0589 (5.5 s) +00:47:22 lora5 [R2 dm] AUC knn 0.874 rf 0.899 | 1-NN 0.776 | MMD2 0.0301 (5.5 s) +00:47:29 lora5 E_N[pc] sq 1.7201 (LB 254.714 UB 344.683 Dif 409.473) l2 1.6651 (6.8 s) +00:47:50 lora5 E_N[all] sq 2.4439 (LB 186.011 UB 234.991 Dif 305.713) l2 2.2556 (20.8 s) +00:47:50 lora5 done in 57 s +00:47:50 zs_pseudo: zs__pseudo_all.npz sha d54f99d9b64e (receipt verified), 36000 scored cells, 3600 in the P/C subsample (same rows as the scorer) +00:47:57 zs_pseudo [R1 raw] P/C k10 0.9903/0.7075 k5 0.9589/0.5822 k3 0.9125/0.4878 | AUC knn 0.934 rf 0.982 | 1-NN 0.846 | MMD2 0.0262 (6.5 s) +00:48:03 zs_pseudo [R1 dm] P/C k10 0.9808/0.7903 k5 0.9414/0.6644 k3 0.8864/0.5600 | AUC knn 0.928 rf 0.976 | 1-NN 0.827 | MMD2 0.0209 (6.1 s) +00:48:09 zs_pseudo [R2 raw] AUC knn 0.958 rf 0.976 | 1-NN 0.893 | MMD2 0.0250 (4.8 s) +00:48:14 zs_pseudo [R2 dm] AUC knn 0.950 rf 0.971 | 1-NN 0.873 | MMD2 0.0203 (5.3 s) +00:48:20 zs_pseudo E_N[pc] sq 1.1126 (LB 218.226 UB 354.833 Dif 370.219) l2 1.1069 (6.1 s) +00:48:37 zs_pseudo E_N[all] sq 1.7215 (LB 166.121 UB 237.278 Dif 288.619) l2 1.6037 (16.6 s) +00:48:37 zs_pseudo done in 47 s +00:48:40 scsemi5: scsemi5__raw.npz sha a559796ae2f0 (receipt verified), 36000 scored cells, 3600 in the P/C subsample (same rows as the scorer) +00:48:46 scsemi5 [R1 raw] P/C k10 0.8622/0.1581 k5 0.7214/0.1164 k3 0.5689/0.0878 | AUC knn 0.994 rf 0.999 | 1-NN 0.978 | MMD2 0.1508 (5.8 s) +00:48:52 scsemi5 [R1 dm] P/C k10 0.5433/0.1669 k5 0.4011/0.1072 k3 0.3097/0.0750 | AUC knn 0.993 rf 0.999 | 1-NN 0.981 | MMD2 0.1215 (5.3 s) +00:48:57 scsemi5 [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1525 (5.2 s) +00:49:02 scsemi5 [R2 dm] AUC knn 0.996 rf 0.999 | 1-NN 0.987 | MMD2 0.1222 (5.0 s) +00:49:08 scsemi5 E_N[pc] sq 2.0604 (LB 179.550 UB 355.261 Dif 541.593) l2 1.7829 (5.6 s) +00:49:29 scsemi5 E_N[all] sq 4.1907 (LB 148.766 UB 229.470 Dif 486.972) l2 3.1773 (20.6 s) +00:49:29 scsemi5 done in 52 s +00:49:29 unit draw4 of ji2025_chili written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ji2025_chili/fewshot_n5/draw4 in 317.3 s (k=10 max |diff| vs scorer 0.00e+00) +JOB_EXIT 0 1653s --design fewshot --dataset ji2025_chili --draws 0,1,2,3,4 --threads 6 +JOB_START 2026-10-02T00:49:29+09:00 --design pooled --dataset giroux2022 --threads 8 +00:49:29 giroux2022 pooled : 24 scored samples; fitting the scorer's view +00:49:31 bandwidth m (median pairwise distance of R1, PCA-50) = 31.3964 +00:49:34 observed cells: 254250 in 24 samples; R1/R2 rebuilt = reference.npz; R3 3600 cells (0 samples with fewer than n) +00:50:07 real_R2 [R1 raw] P/C k10 0.9981/1.0000 k5 0.9922/0.9978 k3 0.9775/0.9872 | AUC knn 0.566 rf 0.844 | 1-NN 0.527 | MMD2 0.0006 (7.5 s) +00:50:15 real_R2 [R1 dm] P/C k10 0.9981/1.0000 k5 0.9906/0.9983 k3 0.9778/0.9853 | AUC knn 0.571 rf 0.840 | 1-NN 0.527 | MMD2 0.0006 (8.0 s) +00:50:21 real_R3 [R2 raw] AUC knn 0.501 rf 0.490 | 1-NN 0.501 | MMD2 -0.0000 (6.0 s) +00:50:27 real_R3 [R2 dm] AUC knn 0.502 rf 0.495 | 1-NN 0.503 | MMD2 -0.0000 (5.9 s) +00:50:32 real_R2 E_N[pc] sq 0.3928 (LB 373.930 UB 513.218 Dif 428.646) l2 0.3992 (5.1 s) +00:51:20 real_R2 E_N[all] sq 0.2773 (LB 266.170 UB 341.663 Dif 287.103) l2 0.2770 (40.4 s) +00:51:24 zs__raw: zs__raw.npz sha e92e868907ea (receipt verified), 36000 scored cells, 3600 in the P/C subsample (same rows as the scorer) +00:51:30 zs__raw [R1 raw] P/C k10 0.9086/0.2811 k5 0.7900/0.2092 k3 0.6853/0.1675 | AUC knn 0.984 rf 0.997 | 1-NN 0.954 | MMD2 0.1198 (5.0 s) +00:51:35 zs__raw [R1 dm] P/C k10 0.9747/0.3550 k5 0.9119/0.2828 k3 0.8556/0.2378 | AUC knn 0.965 rf 0.997 | 1-NN 0.923 | MMD2 0.0842 (5.3 s) +00:51:40 zs__raw [R2 raw] AUC knn 0.996 rf 0.998 | 1-NN 0.985 | MMD2 0.1231 (4.5 s) +00:51:44 zs__raw [R2 dm] AUC knn 0.992 rf 0.995 | 1-NN 0.968 | MMD2 0.0846 (4.3 s) +00:51:49 zs__raw E_N[pc] sq 6.9216 (LB 370.833 UB 446.059 Dif 891.514) l2 5.5386 (5.1 s) +00:52:31 zs__raw E_N[all] sq 4.4813 (LB 251.885 UB 339.199 Dif 643.164) l2 3.7179 (41.7 s) +00:52:31 zs__raw done in 71 s +00:52:35 zs__cal: zs__cal.npz sha 9b9cf5b00d10 (receipt verified), 36000 scored cells, 3600 in the P/C subsample (same rows as the scorer) +00:52:41 zs__cal [R1 raw] P/C k10 0.9947/0.9061 k5 0.9653/0.7967 k3 0.9136/0.6881 | AUC knn 0.916 rf 0.962 | 1-NN 0.786 | MMD2 0.0242 (5.4 s) +00:52:46 zs__cal [R1 dm] P/C k10 0.9806/0.9019 k5 0.9161/0.7958 k3 0.8514/0.6858 | AUC knn 0.904 rf 0.946 | 1-NN 0.778 | MMD2 0.0225 (5.2 s) +00:52:51 zs__cal [R2 raw] AUC knn 0.945 rf 0.946 | 1-NN 0.860 | MMD2 0.0243 (4.4 s) +00:52:55 zs__cal [R2 dm] AUC knn 0.927 rf 0.935 | 1-NN 0.840 | MMD2 0.0234 (4.1 s) +00:53:00 zs__cal E_N[pc] sq 2.1517 (LB 391.052 UB 485.026 Dif 593.257) l2 1.9823 (5.4 s) +00:53:44 zs__cal E_N[all] sq 2.2589 (LB 260.335 UB 342.617 Dif 446.206) l2 2.0698 (43.6 s) +00:53:44 zs__cal done in 73 s +00:53:47 pseudo_full__cal: pseudo_full__cal.npz sha 1cb066b8b215 (receipt verified), 36000 scored cells, 3600 in the P/C subsample (same rows as the scorer) +00:53:53 pseudo_full__cal [R1 raw] P/C k10 0.9908/0.9078 k5 0.9425/0.8008 k3 0.8842/0.7028 | AUC knn 0.882 rf 0.931 | 1-NN 0.753 | MMD2 0.0252 (5.3 s) +00:53:58 pseudo_full__cal [R1 dm] P/C k10 0.9575/0.8464 k5 0.8650/0.7308 k3 0.7656/0.6067 | AUC knn 0.887 rf 0.921 | 1-NN 0.772 | MMD2 0.0212 (4.9 s) +00:54:03 pseudo_full__cal [R2 raw] AUC knn 0.898 rf 0.907 | 1-NN 0.796 | MMD2 0.0240 (4.4 s) +00:54:07 pseudo_full__cal [R2 dm] AUC knn 0.894 rf 0.917 | 1-NN 0.788 | MMD2 0.0213 (4.5 s) +00:54:12 pseudo_full__cal E_N[pc] sq 2.0574 (LB 413.426 UB 497.066 Dif 585.511) l2 1.9547 (4.8 s) +00:54:48 pseudo_full__cal E_N[all] sq 2.2354 (LB 269.773 UB 343.733 Dif 435.104) l2 2.0818 (36.0 s) +00:54:48 pseudo_full__cal done in 64 s +00:54:51 real_lora__raw: real_lora__raw.npz sha 611240c58872 (receipt verified), 36000 scored cells, 3600 in the P/C subsample (same rows as the scorer) +00:54:57 real_lora__raw [R1 raw] P/C k10 0.9981/0.9281 k5 0.9819/0.8506 k3 0.9497/0.7692 | AUC knn 0.840 rf 0.929 | 1-NN 0.718 | MMD2 0.0198 (5.9 s) +00:55:03 real_lora__raw [R1 dm] P/C k10 0.9842/0.9744 k5 0.9444/0.9164 k3 0.8783/0.8236 | AUC knn 0.782 rf 0.863 | 1-NN 0.684 | MMD2 0.0064 (5.5 s) +00:55:08 real_lora__raw [R2 raw] AUC knn 0.881 rf 0.888 | 1-NN 0.785 | MMD2 0.0177 (4.9 s) +00:55:12 real_lora__raw [R2 dm] AUC knn 0.800 rf 0.844 | 1-NN 0.716 | MMD2 0.0063 (4.2 s) +00:55:17 real_lora__raw E_N[pc] sq 1.7374 (LB 399.113 UB 490.068 Dif 557.136) l2 1.6892 (4.8 s) +00:55:57 real_lora__raw E_N[all] sq 1.6992 (LB 260.741 UB 343.424 Dif 401.236) l2 1.6407 (39.9 s) +00:55:57 real_lora__raw done in 69 s +00:56:01 zs__pseudo: zs__pseudo.npz sha 8d53bbe4448c (receipt verified), 36000 scored cells, 3600 in the P/C subsample (same rows as the scorer) +00:56:06 zs__pseudo [R1 raw] P/C k10 0.9975/0.8647 k5 0.9792/0.7564 k3 0.9475/0.6589 | AUC knn 0.892 rf 0.955 | 1-NN 0.776 | MMD2 0.0241 (5.3 s) +00:56:12 zs__pseudo [R1 dm] P/C k10 0.9869/0.9306 k5 0.9456/0.8439 k3 0.8714/0.7450 | AUC knn 0.849 rf 0.904 | 1-NN 0.735 | MMD2 0.0209 (5.2 s) +00:56:17 zs__pseudo [R2 raw] AUC knn 0.931 rf 0.937 | 1-NN 0.838 | MMD2 0.0235 (4.8 s) +00:56:21 zs__pseudo [R2 dm] AUC knn 0.864 rf 0.889 | 1-NN 0.767 | MMD2 0.0219 (4.4 s) +00:56:26 zs__pseudo E_N[pc] sq 1.5573 (LB 383.992 UB 495.787 Dif 558.086) l2 1.5131 (4.7 s) +00:57:10 zs__pseudo E_N[all] sq 1.8718 (LB 257.895 UB 343.520 Dif 418.167) l2 1.7695 (44.3 s) +00:57:10 zs__pseudo done in 73 s +00:57:10 unit pooled of giroux2022 written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/giroux2022/pooled in 460.9 s (k=10 max |diff| vs scorer 0.00e+00) +JOB_EXIT 0 461s --design pooled --dataset giroux2022 --threads 8 +JOB_START 2026-10-02T00:57:10+09:00 --design pooled --dataset ji2025_chili --threads 8 +00:57:11 ji2025_chili pooled : 33 scored samples; fitting the scorer's view +00:57:13 bandwidth m (median pairwise distance of R1, PCA-50) = 29.1327 +00:57:15 observed cells: 124341 in 33 samples; R1/R2 rebuilt = reference.npz; R3 4950 cells (0 samples with fewer than n) +00:57:32 real_R2 [R1 raw] P/C k10 0.9962/1.0000 k5 0.9826/0.9972 k3 0.9628/0.9754 | AUC knn 0.541 rf 0.765 | 1-NN 0.523 | MMD2 0.0001 (9.4 s) +00:57:41 real_R2 [R1 dm] P/C k10 0.9968/1.0000 k5 0.9800/0.9976 k3 0.9582/0.9768 | AUC knn 0.540 rf 0.756 | 1-NN 0.520 | MMD2 0.0001 (9.3 s) +00:57:50 real_R3 [R2 raw] AUC knn 0.494 rf 0.506 | 1-NN 0.499 | MMD2 -0.0000 (7.7 s) +00:57:57 real_R3 [R2 dm] AUC knn 0.494 rf 0.501 | 1-NN 0.493 | MMD2 -0.0000 (7.7 s) +00:58:03 real_R2 E_N[pc] sq 0.2086 (LB 222.929 UB 360.292 Dif 251.576) l2 0.2220 (5.8 s) +00:58:31 real_R2 E_N[all] sq 0.0743 (LB 178.989 UB 264.184 Dif 185.318) l2 0.0732 (19.9 s) +00:58:34 zs__raw: zs__raw.npz sha 712efc06eb4b (receipt verified), 49500 scored cells, 4950 in the P/C subsample (same rows as the scorer) +00:58:41 zs__raw [R1 raw] P/C k10 0.7170/0.0554 k5 0.4871/0.0352 k3 0.3394/0.0255 | AUC knn 0.998 rf 0.999 | 1-NN 0.993 | MMD2 0.2725 (6.0 s) +00:58:48 zs__raw [R1 dm] P/C k10 0.4893/0.1675 k5 0.3212/0.1042 k3 0.2238/0.0687 | AUC knn 0.996 rf 0.997 | 1-NN 0.979 | MMD2 0.1435 (6.7 s) +00:58:54 zs__raw [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.996 | MMD2 0.2746 (6.4 s) +00:59:01 zs__raw [R2 dm] AUC knn 0.996 rf 0.997 | 1-NN 0.981 | MMD2 0.1431 (6.2 s) +00:59:06 zs__raw E_N[pc] sq -82.7564 (LB 296.895 UB 290.367 Dif 837.138) l2 -435.1199 (5.4 s) +00:59:28 zs__raw E_N[all] sq 10.1250 (LB 169.965 UB 216.469 Dif 640.828) l2 7.2496 (21.6 s) +00:59:28 zs__raw done in 57 s +00:59:31 zs__cal: zs__cal.npz sha 3ca947649626 (receipt verified), 49500 scored cells, 4950 in the P/C subsample (same rows as the scorer) +00:59:39 zs__cal [R1 raw] P/C k10 0.7400/0.1065 k5 0.5273/0.0713 k3 0.3707/0.0503 | AUC knn 0.996 rf 0.999 | 1-NN 0.988 | MMD2 0.1313 (6.8 s) +00:59:46 zs__cal [R1 dm] P/C k10 0.6703/0.3473 k5 0.4806/0.2271 k3 0.3438/0.1618 | AUC knn 0.991 rf 0.993 | 1-NN 0.961 | MMD2 0.0415 (7.0 s) +00:59:52 zs__cal [R2 raw] AUC knn 0.998 rf 0.999 | 1-NN 0.992 | MMD2 0.1317 (6.4 s) +00:59:58 zs__cal [R2 dm] AUC knn 0.992 rf 0.993 | 1-NN 0.962 | MMD2 0.0411 (5.8 s) +01:00:05 zs__cal E_N[pc] sq 9.7661 (LB 271.572 UB 311.516 Dif 661.671) l2 7.9346 (6.3 s) +01:00:28 zs__cal E_N[all] sq 7.0761 (LB 171.932 UB 223.008 Dif 533.344) l2 5.4836 (23.3 s) +01:00:28 zs__cal done in 60 s +01:00:32 pseudo_full__cal: pseudo_full__cal.npz sha f08492665ec5 (receipt verified), 49500 scored cells, 4950 in the P/C subsample (same rows as the scorer) +01:00:40 pseudo_full__cal [R1 raw] P/C k10 0.6937/0.1133 k5 0.4642/0.0786 k3 0.3283/0.0590 | AUC knn 0.995 rf 0.998 | 1-NN 0.981 | MMD2 0.1525 (7.7 s) +01:00:48 pseudo_full__cal [R1 dm] P/C k10 0.6398/0.4545 k5 0.4703/0.3133 k3 0.3584/0.2224 | AUC knn 0.975 rf 0.978 | 1-NN 0.914 | MMD2 0.0443 (7.3 s) +01:00:55 pseudo_full__cal [R2 raw] AUC knn 0.997 rf 0.998 | 1-NN 0.983 | MMD2 0.1536 (6.8 s) +01:01:01 pseudo_full__cal [R2 dm] AUC knn 0.973 rf 0.978 | 1-NN 0.909 | MMD2 0.0446 (6.2 s) +01:01:07 pseudo_full__cal E_N[pc] sq 5.9905 (LB 266.288 UB 325.120 Dif 618.719) l2 5.1565 (5.7 s) +01:01:30 pseudo_full__cal E_N[all] sq 7.2150 (LB 181.716 UB 227.073 Dif 508.968) l2 5.6784 (23.1 s) +01:01:30 pseudo_full__cal done in 62 s +01:01:34 real_lora__raw: real_lora__raw.npz sha b98fc5dd4c12 (receipt verified), 49500 scored cells, 4950 in the P/C subsample (same rows as the scorer) +01:01:43 real_lora__raw [R1 raw] P/C k10 0.9709/0.8570 k5 0.9188/0.7335 k3 0.8438/0.6287 | AUC knn 0.902 rf 0.937 | 1-NN 0.790 | MMD2 0.0220 (7.9 s) +01:01:50 real_lora__raw [R1 dm] P/C k10 0.9727/0.9648 k5 0.9160/0.8796 k3 0.8402/0.7739 | AUC knn 0.836 rf 0.890 | 1-NN 0.720 | MMD2 0.0069 (7.9 s) +01:01:57 real_lora__raw [R2 raw] AUC knn 0.908 rf 0.909 | 1-NN 0.803 | MMD2 0.0212 (6.3 s) +01:02:04 real_lora__raw [R2 dm] AUC knn 0.833 rf 0.874 | 1-NN 0.727 | MMD2 0.0067 (6.5 s) +01:02:10 real_lora__raw E_N[pc] sq 1.4392 (LB 248.759 UB 343.379 Dif 384.933) l2 1.4395 (5.9 s) +01:02:32 real_lora__raw E_N[all] sq 1.9477 (LB 177.999 UB 235.578 Dif 290.144) l2 1.8459 (22.3 s) +01:02:32 real_lora__raw done in 62 s +01:02:38 zs__pseudo: zs__pseudo.npz sha 4f4c7d22825d (receipt verified), 49500 scored cells, 4950 in the P/C subsample (same rows as the scorer) +01:02:46 zs__pseudo [R1 raw] P/C k10 0.9846/0.6851 k5 0.9457/0.5618 k3 0.8960/0.4685 | AUC knn 0.940 rf 0.983 | 1-NN 0.855 | MMD2 0.0264 (7.7 s) +01:02:53 zs__pseudo [R1 dm] P/C k10 0.9776/0.7376 k5 0.9358/0.6044 k3 0.8814/0.5014 | AUC knn 0.937 rf 0.979 | 1-NN 0.844 | MMD2 0.0229 (6.9 s) +01:03:01 zs__pseudo [R2 raw] AUC knn 0.960 rf 0.980 | 1-NN 0.891 | MMD2 0.0255 (6.8 s) +01:03:07 zs__pseudo [R2 dm] AUC knn 0.951 rf 0.977 | 1-NN 0.877 | MMD2 0.0227 (6.6 s) +01:03:13 zs__pseudo E_N[pc] sq 1.0447 (LB 207.047 UB 352.131 Dif 358.615) l2 1.0482 (5.9 s) +01:03:38 zs__pseudo E_N[all] sq 1.6872 (LB 161.781 UB 236.241 Dif 287.411) l2 1.5692 (24.3 s) +01:03:38 zs__pseudo done in 65 s +01:03:38 unit pooled of ji2025_chili written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ji2025_chili/pooled in 387.0 s (k=10 max |diff| vs scorer 0.00e+00) +JOB_EXIT 0 388s --design pooled --dataset ji2025_chili --threads 8 +JOB_START 2026-10-02T01:03:38+09:00 --design fewshot --dataset immicro --draws 0,1,2,3,4 --threads 6 +01:03:39 immicro fewshot draw0 : 102 scored samples; fitting the scorer's view +01:03:45 bandwidth m (median pairwise distance of R1, PCA-50) = 21.5890 +01:03:49 observed cells: 371922 in 102 samples; R1/R2 rebuilt = reference.npz; R3 15300 cells (0 samples with fewer than n) +01:05:05 real_R2 [R1 raw] P/C k10 0.9668/0.9998 k5 0.9072/0.9881 k3 0.8356/0.9342 | AUC knn 0.503 rf 0.584 | 1-NN 0.498 | MMD2 0.0000 (46.0 s) +01:05:50 real_R2 [R1 dm] P/C k10 0.9652/0.9998 k5 0.9054/0.9874 k3 0.8338/0.9321 | AUC knn 0.502 rf 0.580 | 1-NN 0.499 | MMD2 0.0000 (45.1 s) +01:06:32 real_R3 [R2 raw] AUC knn 0.502 rf 0.496 | 1-NN 0.498 | MMD2 -0.0000 (39.9 s) +01:07:13 real_R3 [R2 dm] AUC knn 0.503 rf 0.498 | 1-NN 0.496 | MMD2 -0.0000 (40.3 s) +01:07:23 real_R2 E_N[pc] sq 0.4908 (LB 146.091 UB 211.141 Dif 178.017) l2 0.5048 (10.8 s) +01:08:21 real_R2 E_N[all] sq 0.3792 (LB 125.936 UB 174.249 Dif 144.258) l2 0.3932 (43.7 s) +01:08:43 zs_raw: zs__raw_all.npz sha aa0e35694182 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:09:22 zs_raw [R1 raw] P/C k10 0.6767/0.1944 k5 0.5185/0.1249 k3 0.4008/0.0886 | AUC knn 0.995 rf 0.998 | 1-NN 0.977 | MMD2 0.1004 (35.9 s) +01:09:57 zs_raw [R1 dm] P/C k10 0.6699/0.2163 k5 0.5082/0.1396 k3 0.3995/0.0972 | AUC knn 0.995 rf 0.998 | 1-NN 0.975 | MMD2 0.0949 (35.7 s) +01:10:31 zs_raw [R2 raw] AUC knn 0.996 rf 0.998 | 1-NN 0.981 | MMD2 0.1026 (31.6 s) +01:11:02 zs_raw [R2 dm] AUC knn 0.996 rf 0.998 | 1-NN 0.977 | MMD2 0.0964 (31.1 s) +01:11:11 zs_raw E_N[pc] sq 39.6960 (LB 178.210 UB 183.919 Dif 404.819) l2 16.1747 (9.0 s) +01:12:11 zs_raw E_N[all] sq 7.7713 (LB 135.059 UB 157.618 Dif 310.368) l2 5.7488 (59.1 s) +01:12:11 zs_raw done in 230 s +01:12:33 zs_cal: zs__cal.npz sha 8c5ee801d027 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:13:13 zs_cal [R1 raw] P/C k10 0.9046/0.5295 k5 0.8099/0.4226 k3 0.7048/0.3459 | AUC knn 0.967 rf 0.986 | 1-NN 0.897 | MMD2 0.0440 (38.3 s) +01:13:52 zs_cal [R1 dm] P/C k10 0.9417/0.7782 k5 0.8799/0.6565 k3 0.8093/0.5562 | AUC knn 0.931 rf 0.975 | 1-NN 0.826 | MMD2 0.0270 (38.3 s) +01:14:25 zs_cal [R2 raw] AUC knn 0.972 rf 0.986 | 1-NN 0.909 | MMD2 0.0441 (31.5 s) +01:15:00 zs_cal [R2 dm] AUC knn 0.939 rf 0.975 | 1-NN 0.839 | MMD2 0.0269 (34.2 s) +01:15:11 zs_cal E_N[pc] sq 2.9362 (LB 156.371 UB 198.463 Dif 279.961) l2 2.5185 (11.3 s) +01:16:22 zs_cal E_N[all] sq 2.9641 (LB 127.966 UB 162.167 Dif 229.338) l2 2.6041 (70.5 s) +01:16:22 zs_cal done in 251 s +01:16:43 lora5: lora__raw.npz sha aad67a0e674b (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:17:22 lora5 [R1 raw] P/C k10 0.9518/0.8004 k5 0.8824/0.6807 k3 0.7974/0.5716 | AUC knn 0.934 rf 0.963 | 1-NN 0.818 | MMD2 0.0252 (37.1 s) +01:18:01 lora5 [R1 dm] P/C k10 0.9729/0.9627 k5 0.9329/0.8953 k3 0.8842/0.8104 | AUC knn 0.870 rf 0.946 | 1-NN 0.725 | MMD2 0.0136 (38.8 s) +01:18:36 lora5 [R2 raw] AUC knn 0.940 rf 0.959 | 1-NN 0.835 | MMD2 0.0251 (32.9 s) +01:19:13 lora5 [R2 dm] AUC knn 0.880 rf 0.941 | 1-NN 0.739 | MMD2 0.0136 (36.8 s) +01:19:23 lora5 E_N[pc] sq 1.4478 (LB 149.382 UB 202.608 Dif 226.445) l2 1.3899 (9.7 s) +01:20:21 lora5 E_N[all] sq 1.5664 (LB 125.079 UB 164.281 Dif 186.487) l2 1.5006 (57.1 s) +01:20:21 lora5 done in 239 s +01:20:41 zs_pseudo: zs__pseudo_all.npz sha 1cc907457cef (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:21:21 zs_pseudo [R1 raw] P/C k10 0.9389/0.5308 k5 0.8720/0.4296 k3 0.7936/0.3578 | AUC knn 0.959 rf 0.988 | 1-NN 0.889 | MMD2 0.0451 (37.8 s) +01:21:58 zs_pseudo [R1 dm] P/C k10 0.9655/0.7476 k5 0.9217/0.6330 k3 0.8693/0.5405 | AUC knn 0.926 rf 0.982 | 1-NN 0.830 | MMD2 0.0304 (37.0 s) +01:22:35 zs_pseudo [R2 raw] AUC knn 0.967 rf 0.988 | 1-NN 0.905 | MMD2 0.0448 (34.9 s) +01:23:12 zs_pseudo [R2 dm] AUC knn 0.935 rf 0.981 | 1-NN 0.841 | MMD2 0.0301 (37.3 s) +01:23:24 zs_pseudo E_N[pc] sq 2.0782 (LB 144.231 UB 200.939 Dif 262.080) l2 1.8518 (11.6 s) +01:24:31 zs_pseudo E_N[all] sq 2.3411 (LB 122.138 UB 163.008 Dif 217.820) l2 2.1057 (66.1 s) +01:24:31 zs_pseudo done in 250 s +01:24:43 scsemi5: scsemi5__raw.npz sha 438e330071db (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:25:19 scsemi5 [R1 raw] P/C k10 0.4955/0.0360 k5 0.3195/0.0241 k3 0.2329/0.0184 | AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.2002 (33.9 s) +01:26:01 scsemi5 [R1 dm] P/C k10 0.8176/0.2542 k5 0.7174/0.1750 k3 0.6200/0.1286 | AUC knn 0.989 rf 0.999 | 1-NN 0.968 | MMD2 0.0944 (42.4 s) +01:26:36 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.997 | MMD2 0.2017 (32.4 s) +01:27:12 scsemi5 [R2 dm] AUC knn 0.990 rf 0.999 | 1-NN 0.968 | MMD2 0.0941 (36.4 s) +01:27:22 scsemi5 E_N[pc] sq 2.7770 (LB 107.857 UB 199.487 Dif 362.311) l2 2.2524 (9.7 s) +01:28:17 scsemi5 E_N[all] sq 3.6965 (LB 97.590 UB 160.228 Dif 329.137) l2 2.7979 (54.9 s) +01:28:17 scsemi5 done in 226 s +01:28:17 unit draw0 of immicro written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/immicro/fewshot_n5/draw0 in 1478.6 s (k=10 max |diff| vs scorer 0.00e+00) +01:28:17 immicro fewshot draw1 : 102 scored samples; fitting the scorer's view +01:28:23 bandwidth m (median pairwise distance of R1, PCA-50) = 21.5955 +01:28:24 observed cells: 373143 in 102 samples; R1/R2 rebuilt = reference.npz; R3 15300 cells (0 samples with fewer than n) +01:29:41 real_R2 [R1 raw] P/C k10 0.9651/0.9998 k5 0.9071/0.9890 k3 0.8343/0.9341 | AUC knn 0.510 rf 0.581 | 1-NN 0.500 | MMD2 0.0000 (51.1 s) +01:30:29 real_R2 [R1 dm] P/C k10 0.9637/0.9999 k5 0.9043/0.9887 k3 0.8307/0.9339 | AUC knn 0.510 rf 0.580 | 1-NN 0.498 | MMD2 0.0000 (48.4 s) +01:31:14 real_R3 [R2 raw] AUC knn 0.502 rf 0.497 | 1-NN 0.500 | MMD2 -0.0000 (42.5 s) +01:31:57 real_R3 [R2 dm] AUC knn 0.504 rf 0.500 | 1-NN 0.497 | MMD2 -0.0000 (43.1 s) +01:32:07 real_R2 E_N[pc] sq 0.4830 (LB 145.859 UB 211.968 Dif 177.791) l2 0.4969 (9.3 s) +01:33:01 real_R2 E_N[all] sq 0.3966 (LB 125.327 UB 172.588 Dif 144.073) l2 0.4107 (41.4 s) +01:33:03 zs_raw: zs__raw_all.npz sha aa0e35694182 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:33:40 zs_raw [R1 raw] P/C k10 0.6822/0.1880 k5 0.5232/0.1217 k3 0.4044/0.0848 | AUC knn 0.995 rf 0.998 | 1-NN 0.978 | MMD2 0.0998 (34.6 s) +01:34:15 zs_raw [R1 dm] P/C k10 0.6798/0.2102 k5 0.5237/0.1356 k3 0.3951/0.0954 | AUC knn 0.995 rf 0.998 | 1-NN 0.975 | MMD2 0.0942 (35.6 s) +01:34:51 zs_raw [R2 raw] AUC knn 0.996 rf 0.998 | 1-NN 0.981 | MMD2 0.1021 (33.3 s) +01:35:24 zs_raw [R2 dm] AUC knn 0.996 rf 0.998 | 1-NN 0.978 | MMD2 0.0958 (32.6 s) +01:35:35 zs_raw E_N[pc] sq 34.0057 (LB 177.671 UB 184.321 Dif 403.802) l2 14.8200 (11.1 s) +01:36:44 zs_raw E_N[all] sq 7.3164 (LB 134.222 UB 158.242 Dif 309.963) l2 5.4512 (67.7 s) +01:36:44 zs_raw done in 223 s +01:37:03 zs_cal: zs__cal.npz sha ee5894929951 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:37:43 zs_cal [R1 raw] P/C k10 0.8987/0.5419 k5 0.7977/0.4282 k3 0.6881/0.3469 | AUC knn 0.968 rf 0.987 | 1-NN 0.898 | MMD2 0.0429 (37.8 s) +01:38:22 zs_cal [R1 dm] P/C k10 0.9344/0.7783 k5 0.8675/0.6527 k3 0.7890/0.5425 | AUC knn 0.938 rf 0.979 | 1-NN 0.833 | MMD2 0.0282 (39.1 s) +01:38:57 zs_cal [R2 raw] AUC knn 0.976 rf 0.987 | 1-NN 0.914 | MMD2 0.0433 (32.5 s) +01:39:30 zs_cal [R2 dm] AUC knn 0.945 rf 0.978 | 1-NN 0.847 | MMD2 0.0285 (32.6 s) +01:39:41 zs_cal E_N[pc] sq 2.9663 (LB 157.460 UB 198.481 Dif 279.142) l2 2.5385 (11.6 s) +01:40:41 zs_cal E_N[all] sq 2.9091 (LB 127.992 UB 162.669 Dif 228.873) l2 2.5586 (58.8 s) +01:40:41 zs_cal done in 237 s +01:41:02 lora5: lora__raw.npz sha 88ec580cfc4a (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:41:45 lora5 [R1 raw] P/C k10 0.9519/0.8620 k5 0.8805/0.7399 k3 0.7916/0.6254 | AUC knn 0.935 rf 0.961 | 1-NN 0.810 | MMD2 0.0157 (40.2 s) +01:42:25 lora5 [R1 dm] P/C k10 0.9730/0.9717 k5 0.9330/0.9051 k3 0.8847/0.8176 | AUC knn 0.879 rf 0.945 | 1-NN 0.723 | MMD2 0.0094 (39.8 s) +01:42:59 lora5 [R2 raw] AUC knn 0.942 rf 0.957 | 1-NN 0.829 | MMD2 0.0158 (32.2 s) +01:43:33 lora5 [R2 dm] AUC knn 0.888 rf 0.940 | 1-NN 0.745 | MMD2 0.0095 (34.1 s) +01:43:45 lora5 E_N[pc] sq 1.3612 (LB 147.819 UB 203.480 Dif 223.585) l2 1.3141 (11.7 s) +01:45:02 lora5 E_N[all] sq 1.4578 (LB 123.976 UB 165.030 Dif 183.824) l2 1.4033 (76.2 s) +01:45:02 lora5 done in 261 s +01:45:04 zs_pseudo: zs__pseudo_all.npz sha 1cc907457cef (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:45:45 zs_pseudo [R1 raw] P/C k10 0.9376/0.5348 k5 0.8695/0.4312 k3 0.7873/0.3595 | AUC knn 0.959 rf 0.989 | 1-NN 0.888 | MMD2 0.0441 (38.4 s) +01:46:24 zs_pseudo [R1 dm] P/C k10 0.9650/0.7519 k5 0.9204/0.6361 k3 0.8650/0.5386 | AUC knn 0.928 rf 0.983 | 1-NN 0.829 | MMD2 0.0299 (39.1 s) +01:47:00 zs_pseudo [R2 raw] AUC knn 0.967 rf 0.989 | 1-NN 0.905 | MMD2 0.0442 (33.5 s) +01:47:33 zs_pseudo [R2 dm] AUC knn 0.936 rf 0.982 | 1-NN 0.845 | MMD2 0.0298 (33.8 s) +01:47:47 zs_pseudo E_N[pc] sq 2.0252 (LB 144.039 UB 201.621 Dif 260.656) l2 1.8082 (13.3 s) +01:48:46 zs_pseudo E_N[all] sq 2.2654 (LB 121.544 UB 163.632 Dif 216.891) l2 2.0397 (58.5 s) +01:48:46 zs_pseudo done in 224 s +01:48:58 scsemi5: scsemi5__raw.npz sha 1e4d182adee0 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:49:36 scsemi5 [R1 raw] P/C k10 0.5241/0.0393 k5 0.3418/0.0273 k3 0.2405/0.0208 | AUC knn 0.998 rf 1.000 | 1-NN 0.995 | MMD2 0.1753 (35.4 s) +01:50:15 scsemi5 [R1 dm] P/C k10 0.8342/0.3138 k5 0.7313/0.2180 k3 0.6401/0.1652 | AUC knn 0.986 rf 0.999 | 1-NN 0.960 | MMD2 0.0864 (38.7 s) +01:50:49 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.996 | MMD2 0.1769 (32.2 s) +01:51:28 scsemi5 [R2 dm] AUC knn 0.987 rf 0.999 | 1-NN 0.960 | MMD2 0.0862 (38.8 s) +01:51:39 scsemi5 E_N[pc] sq 2.7353 (LB 109.362 UB 201.685 Dif 361.890) l2 2.2255 (11.0 s) +01:52:36 scsemi5 E_N[all] sq 3.6359 (LB 98.229 UB 162.020 Dif 330.167) l2 2.7676 (57.1 s) +01:52:36 scsemi5 done in 230 s +01:52:36 unit draw1 of immicro written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/immicro/fewshot_n5/draw1 in 1459.1 s (k=10 max |diff| vs scorer 0.00e+00) +01:52:37 immicro fewshot draw2 : 102 scored samples; fitting the scorer's view +01:52:42 bandwidth m (median pairwise distance of R1, PCA-50) = 21.5320 +01:52:43 observed cells: 375605 in 102 samples; R1/R2 rebuilt = reference.npz; R3 15300 cells (0 samples with fewer than n) +01:54:03 real_R2 [R1 raw] P/C k10 0.9646/0.9998 k5 0.9058/0.9880 k3 0.8337/0.9314 | AUC knn 0.507 rf 0.585 | 1-NN 0.499 | MMD2 0.0000 (50.8 s) +01:54:52 real_R2 [R1 dm] P/C k10 0.9623/0.9995 k5 0.9042/0.9865 k3 0.8321/0.9296 | AUC knn 0.507 rf 0.580 | 1-NN 0.497 | MMD2 0.0000 (49.4 s) +01:55:36 real_R3 [R2 raw] AUC knn 0.500 rf 0.498 | 1-NN 0.496 | MMD2 -0.0000 (41.5 s) +01:56:18 real_R3 [R2 dm] AUC knn 0.501 rf 0.498 | 1-NN 0.496 | MMD2 -0.0000 (42.1 s) +01:56:31 real_R2 E_N[pc] sq 0.4901 (LB 146.028 UB 211.254 Dif 177.997) l2 0.5042 (12.9 s) +01:57:31 real_R2 E_N[all] sq 0.3641 (LB 125.664 UB 176.921 Dif 144.325) l2 0.3788 (45.6 s) +01:57:35 zs_raw: zs__raw_all.npz sha aa0e35694182 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +01:58:14 zs_raw [R1 raw] P/C k10 0.6682/0.1849 k5 0.5168/0.1178 k3 0.3835/0.0832 | AUC knn 0.995 rf 0.998 | 1-NN 0.979 | MMD2 0.1013 (36.2 s) +01:58:48 zs_raw [R1 dm] P/C k10 0.6631/0.2085 k5 0.5105/0.1336 k3 0.3860/0.0954 | AUC knn 0.995 rf 0.998 | 1-NN 0.976 | MMD2 0.0957 (34.8 s) +01:59:27 zs_raw [R2 raw] AUC knn 0.997 rf 0.998 | 1-NN 0.982 | MMD2 0.1033 (35.7 s) +01:59:59 zs_raw [R2 dm] AUC knn 0.996 rf 0.998 | 1-NN 0.979 | MMD2 0.0972 (32.0 s) +02:00:09 zs_raw E_N[pc] sq 39.9154 (LB 178.126 UB 183.780 Dif 403.775) l2 16.1714 (9.8 s) +02:01:02 zs_raw E_N[all] sq 7.1503 (LB 134.378 UB 158.881 Dif 309.576) l2 5.3455 (52.8 s) +02:01:02 zs_raw done in 211 s +02:01:21 zs_cal: zs__cal.npz sha ab18cbfdc9a2 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:01:59 zs_cal [R1 raw] P/C k10 0.8967/0.5460 k5 0.7999/0.4321 k3 0.6971/0.3515 | AUC knn 0.965 rf 0.985 | 1-NN 0.893 | MMD2 0.0385 (36.3 s) +02:02:35 zs_cal [R1 dm] P/C k10 0.9366/0.7792 k5 0.8708/0.6546 k3 0.7942/0.5492 | AUC knn 0.935 rf 0.975 | 1-NN 0.829 | MMD2 0.0253 (36.2 s) +02:03:09 zs_cal [R2 raw] AUC knn 0.972 rf 0.985 | 1-NN 0.907 | MMD2 0.0388 (31.3 s) +02:03:44 zs_cal [R2 dm] AUC knn 0.942 rf 0.975 | 1-NN 0.841 | MMD2 0.0253 (34.4 s) +02:03:53 zs_cal E_N[pc] sq 2.9672 (LB 157.111 UB 197.992 Dif 278.416) l2 2.5424 (9.8 s) +02:04:56 zs_cal E_N[all] sq 2.8124 (LB 127.920 UB 163.444 Dif 227.826) l2 2.4834 (61.6 s) +02:04:56 zs_cal done in 234 s +02:05:16 lora5: lora__raw.npz sha 30416b7097f0 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:06:00 lora5 [R1 raw] P/C k10 0.9459/0.7861 k5 0.8678/0.6584 k3 0.7756/0.5463 | AUC knn 0.941 rf 0.963 | 1-NN 0.831 | MMD2 0.0217 (41.8 s) +02:06:41 lora5 [R1 dm] P/C k10 0.9760/0.9693 k5 0.9368/0.9061 k3 0.8872/0.8178 | AUC knn 0.867 rf 0.938 | 1-NN 0.718 | MMD2 0.0104 (41.1 s) +02:07:13 lora5 [R2 raw] AUC knn 0.947 rf 0.959 | 1-NN 0.845 | MMD2 0.0218 (30.1 s) +02:07:46 lora5 [R2 dm] AUC knn 0.874 rf 0.931 | 1-NN 0.728 | MMD2 0.0103 (32.3 s) +02:07:56 lora5 E_N[pc] sq 1.5833 (LB 153.077 UB 202.354 Dif 231.099) l2 1.5266 (9.7 s) +02:08:48 lora5 E_N[all] sq 1.6341 (LB 126.747 UB 165.581 Dif 190.206) l2 1.5727 (51.9 s) +02:08:48 lora5 done in 232 s +02:08:50 zs_pseudo: zs__pseudo_all.npz sha 1cc907457cef (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:09:31 zs_pseudo [R1 raw] P/C k10 0.9371/0.5312 k5 0.8660/0.4297 k3 0.7861/0.3553 | AUC knn 0.959 rf 0.990 | 1-NN 0.891 | MMD2 0.0448 (38.2 s) +02:10:09 zs_pseudo [R1 dm] P/C k10 0.9648/0.7510 k5 0.9230/0.6325 k3 0.8697/0.5363 | AUC knn 0.928 rf 0.983 | 1-NN 0.833 | MMD2 0.0306 (38.4 s) +02:10:43 zs_pseudo [R2 raw] AUC knn 0.967 rf 0.989 | 1-NN 0.906 | MMD2 0.0447 (32.1 s) +02:11:18 zs_pseudo [R2 dm] AUC knn 0.936 rf 0.982 | 1-NN 0.843 | MMD2 0.0302 (34.2 s) +02:11:31 zs_pseudo E_N[pc] sq 2.0555 (LB 144.162 UB 200.916 Dif 260.818) l2 1.8372 (13.7 s) +02:12:32 zs_pseudo E_N[all] sq 2.2340 (LB 121.442 UB 164.265 Dif 217.108) l2 2.0183 (59.8 s) +02:12:32 zs_pseudo done in 224 s +02:12:33 fetching generated/immicro/fewshot_n5/draw2/scsemi5__raw.npz (0.12 GiB) from spark-0110 +02:12:46 scsemi5: scsemi5__raw.npz sha f16465fe516e (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:13:23 scsemi5 [R1 raw] P/C k10 0.5678/0.0361 k5 0.3826/0.0252 k3 0.2697/0.0196 | AUC knn 0.998 rf 1.000 | 1-NN 0.995 | MMD2 0.1815 (34.4 s) +02:14:01 scsemi5 [R1 dm] P/C k10 0.8306/0.2940 k5 0.7335/0.2087 k3 0.6416/0.1606 | AUC knn 0.986 rf 1.000 | 1-NN 0.959 | MMD2 0.0862 (37.8 s) +02:14:37 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.996 | MMD2 0.1830 (34.0 s) +02:15:11 scsemi5 [R2 dm] AUC knn 0.987 rf 1.000 | 1-NN 0.961 | MMD2 0.0859 (34.7 s) +02:15:21 scsemi5 E_N[pc] sq 2.8021 (LB 108.957 UB 200.917 Dif 366.641) l2 2.2695 (9.3 s) +02:16:17 scsemi5 E_N[all] sq 3.6988 (LB 97.694 UB 162.186 Dif 336.235) l2 2.7984 (56.1 s) +02:16:17 scsemi5 done in 225 s +02:16:17 unit draw2 of immicro written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/immicro/fewshot_n5/draw2 in 1421.0 s (k=10 max |diff| vs scorer 0.00e+00) +02:16:17 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/immicro/fewshot_n5/draw2/scsemi5__raw.npz +02:16:17 immicro fewshot draw3 : 102 scored samples; fitting the scorer's view +02:16:23 bandwidth m (median pairwise distance of R1, PCA-50) = 21.5665 +02:16:25 observed cells: 372648 in 102 samples; R1/R2 rebuilt = reference.npz; R3 15300 cells (0 samples with fewer than n) +02:17:39 real_R2 [R1 raw] P/C k10 0.9658/0.9997 k5 0.9085/0.9883 k3 0.8354/0.9313 | AUC knn 0.508 rf 0.586 | 1-NN 0.498 | MMD2 0.0000 (48.9 s) +02:18:31 real_R2 [R1 dm] P/C k10 0.9636/0.9998 k5 0.9064/0.9871 k3 0.8335/0.9286 | AUC knn 0.508 rf 0.586 | 1-NN 0.500 | MMD2 0.0000 (51.3 s) +02:19:15 real_R3 [R2 raw] AUC knn 0.502 rf 0.495 | 1-NN 0.498 | MMD2 -0.0000 (41.5 s) +02:19:53 real_R3 [R2 dm] AUC knn 0.502 rf 0.496 | 1-NN 0.496 | MMD2 -0.0000 (38.7 s) +02:20:04 real_R2 E_N[pc] sq 0.4715 (LB 146.496 UB 214.321 Dif 178.476) l2 0.4865 (10.7 s) +02:21:05 real_R2 E_N[all] sq 0.3703 (LB 126.406 UB 175.760 Dif 144.683) l2 0.3844 (47.5 s) +02:21:08 zs_raw: zs__raw_all.npz sha aa0e35694182 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:21:45 zs_raw [R1 raw] P/C k10 0.6763/0.1925 k5 0.5197/0.1236 k3 0.4031/0.0898 | AUC knn 0.995 rf 0.998 | 1-NN 0.977 | MMD2 0.0999 (34.1 s) +02:22:18 zs_raw [R1 dm] P/C k10 0.6599/0.2146 k5 0.4905/0.1394 k3 0.3798/0.0991 | AUC knn 0.995 rf 0.998 | 1-NN 0.976 | MMD2 0.0943 (33.6 s) +02:22:54 zs_raw [R2 raw] AUC knn 0.997 rf 0.998 | 1-NN 0.981 | MMD2 0.1023 (33.6 s) +02:23:24 zs_raw [R2 dm] AUC knn 0.996 rf 0.998 | 1-NN 0.978 | MMD2 0.0960 (29.6 s) +02:23:33 zs_raw E_N[pc] sq 26.2359 (LB 178.059 UB 186.661 Dif 403.744) l2 12.8504 (9.3 s) +02:24:34 zs_raw E_N[all] sq 7.0991 (LB 134.473 UB 159.222 Dif 310.168) l2 5.3287 (60.1 s) +02:24:34 zs_raw done in 210 s +02:24:53 zs_cal: zs__cal.npz sha 773cd54a17d9 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:25:32 zs_cal [R1 raw] P/C k10 0.9095/0.5312 k5 0.8154/0.4219 k3 0.7216/0.3424 | AUC knn 0.964 rf 0.986 | 1-NN 0.896 | MMD2 0.0448 (36.7 s) +02:26:09 zs_cal [R1 dm] P/C k10 0.9439/0.7743 k5 0.8802/0.6550 k3 0.8075/0.5516 | AUC knn 0.931 rf 0.976 | 1-NN 0.825 | MMD2 0.0278 (36.3 s) +02:26:45 zs_cal [R2 raw] AUC knn 0.973 rf 0.986 | 1-NN 0.909 | MMD2 0.0448 (34.1 s) +02:27:18 zs_cal [R2 dm] AUC knn 0.937 rf 0.976 | 1-NN 0.835 | MMD2 0.0275 (33.1 s) +02:27:32 zs_cal E_N[pc] sq 2.6734 (LB 155.902 UB 201.617 Dif 278.116) l2 2.3233 (13.5 s) +02:28:38 zs_cal E_N[all] sq 2.8451 (LB 128.045 UB 163.730 Dif 229.574) l2 2.5102 (66.0 s) +02:28:38 zs_cal done in 244 s +02:28:59 lora5: lora__raw.npz sha 580cd26d5f70 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:29:42 lora5 [R1 raw] P/C k10 0.9599/0.7829 k5 0.9003/0.6618 k3 0.8226/0.5581 | AUC knn 0.930 rf 0.966 | 1-NN 0.821 | MMD2 0.0260 (40.7 s) +02:30:21 lora5 [R1 dm] P/C k10 0.9788/0.9678 k5 0.9456/0.9072 k3 0.8997/0.8224 | AUC knn 0.863 rf 0.946 | 1-NN 0.714 | MMD2 0.0132 (39.3 s) +02:30:59 lora5 [R2 raw] AUC knn 0.940 rf 0.961 | 1-NN 0.836 | MMD2 0.0258 (35.5 s) +02:31:35 lora5 [R2 dm] AUC knn 0.868 rf 0.940 | 1-NN 0.722 | MMD2 0.0129 (35.6 s) +02:31:44 lora5 E_N[pc] sq 1.3290 (LB 148.169 UB 206.104 Dif 225.162) l2 1.2923 (9.2 s) +02:32:45 lora5 E_N[all] sq 1.4782 (LB 124.814 UB 166.088 Dif 185.824) l2 1.4270 (59.7 s) +02:32:45 lora5 done in 246 s +02:32:47 zs_pseudo: zs__pseudo_all.npz sha 1cc907457cef (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:33:30 zs_pseudo [R1 raw] P/C k10 0.9399/0.5333 k5 0.8725/0.4314 k3 0.7967/0.3593 | AUC knn 0.958 rf 0.989 | 1-NN 0.889 | MMD2 0.0448 (40.3 s) +02:34:09 zs_pseudo [R1 dm] P/C k10 0.9665/0.7558 k5 0.9211/0.6367 k3 0.8637/0.5379 | AUC knn 0.926 rf 0.982 | 1-NN 0.831 | MMD2 0.0304 (39.2 s) +02:34:47 zs_pseudo [R2 raw] AUC knn 0.966 rf 0.989 | 1-NN 0.904 | MMD2 0.0444 (35.4 s) +02:35:21 zs_pseudo [R2 dm] AUC knn 0.934 rf 0.982 | 1-NN 0.843 | MMD2 0.0301 (34.0 s) +02:35:31 zs_pseudo E_N[pc] sq 1.9725 (LB 144.520 UB 204.067 Dif 261.978) l2 1.7679 (9.7 s) +02:36:28 zs_pseudo E_N[all] sq 2.2377 (LB 121.635 UB 164.590 Dif 217.755) l2 2.0218 (57.1 s) +02:36:28 zs_pseudo done in 224 s +02:36:29 fetching generated/immicro/fewshot_n5/draw3/scsemi5__raw.npz (0.11 GiB) from spark-0110 +02:36:42 scsemi5: scsemi5__raw.npz sha bce8a3429438 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:37:20 scsemi5 [R1 raw] P/C k10 0.4731/0.0342 k5 0.2907/0.0252 k3 0.1990/0.0195 | AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.1848 (36.2 s) +02:38:01 scsemi5 [R1 dm] P/C k10 0.8269/0.3030 k5 0.7314/0.2151 k3 0.6363/0.1641 | AUC knn 0.987 rf 0.999 | 1-NN 0.960 | MMD2 0.0947 (40.9 s) +02:38:37 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.996 | MMD2 0.1858 (34.1 s) +02:39:15 scsemi5 [R2 dm] AUC knn 0.989 rf 0.999 | 1-NN 0.963 | MMD2 0.0945 (37.1 s) +02:39:24 scsemi5 E_N[pc] sq 2.6725 (LB 109.831 UB 204.396 Dif 362.551) l2 2.1783 (9.3 s) +02:40:21 scsemi5 E_N[all] sq 3.5999 (LB 98.499 UB 162.669 Dif 329.505) l2 2.7386 (56.7 s) +02:40:21 scsemi5 done in 232 s +02:40:21 unit draw3 of immicro written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/immicro/fewshot_n5/draw3 in 1443.7 s (k=10 max |diff| vs scorer 0.00e+00) +02:40:21 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/immicro/fewshot_n5/draw3/scsemi5__raw.npz +02:40:21 immicro fewshot draw4 : 102 scored samples; fitting the scorer's view +02:40:26 bandwidth m (median pairwise distance of R1, PCA-50) = 21.5051 +02:40:27 observed cells: 375050 in 102 samples; R1/R2 rebuilt = reference.npz; R3 15300 cells (0 samples with fewer than n) +02:41:41 real_R2 [R1 raw] P/C k10 0.9650/0.9999 k5 0.9081/0.9875 k3 0.8360/0.9305 | AUC knn 0.508 rf 0.583 | 1-NN 0.500 | MMD2 0.0000 (48.8 s) +02:42:30 real_R2 [R1 dm] P/C k10 0.9629/0.9997 k5 0.9034/0.9876 k3 0.8325/0.9293 | AUC knn 0.507 rf 0.578 | 1-NN 0.503 | MMD2 0.0000 (48.2 s) +02:43:14 real_R3 [R2 raw] AUC knn 0.501 rf 0.494 | 1-NN 0.497 | MMD2 -0.0000 (41.9 s) +02:43:58 real_R3 [R2 dm] AUC knn 0.502 rf 0.494 | 1-NN 0.499 | MMD2 -0.0000 (43.8 s) +02:44:11 real_R2 E_N[pc] sq 0.4863 (LB 146.155 UB 212.084 Dif 178.216) l2 0.5014 (13.2 s) +02:45:12 real_R2 E_N[all] sq 0.3976 (LB 125.603 UB 172.990 Dif 144.441) l2 0.4108 (45.5 s) +02:45:14 zs_raw: zs__raw_all.npz sha aa0e35694182 (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:45:48 zs_raw [R1 raw] P/C k10 0.6826/0.1903 k5 0.5246/0.1233 k3 0.4016/0.0879 | AUC knn 0.995 rf 0.998 | 1-NN 0.978 | MMD2 0.1003 (32.1 s) +02:46:21 zs_raw [R1 dm] P/C k10 0.6816/0.2142 k5 0.5255/0.1376 k3 0.4071/0.0988 | AUC knn 0.995 rf 0.998 | 1-NN 0.975 | MMD2 0.0947 (32.7 s) +02:46:56 zs_raw [R2 raw] AUC knn 0.997 rf 0.998 | 1-NN 0.982 | MMD2 0.1026 (32.8 s) +02:47:27 zs_raw [R2 dm] AUC knn 0.997 rf 0.998 | 1-NN 0.978 | MMD2 0.0963 (30.5 s) +02:47:41 zs_raw E_N[pc] sq 33.3671 (LB 177.705 UB 184.464 Dif 403.254) l2 14.8989 (13.7 s) +02:48:45 zs_raw E_N[all] sq 6.8412 (LB 134.322 UB 159.895 Dif 309.277) l2 5.1212 (63.5 s) +02:48:45 zs_raw done in 214 s +02:49:04 zs_cal: zs__cal.npz sha 05fd782250fe (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:49:43 zs_cal [R1 raw] P/C k10 0.9088/0.5276 k5 0.8143/0.4213 k3 0.7176/0.3445 | AUC knn 0.965 rf 0.985 | 1-NN 0.896 | MMD2 0.0441 (37.3 s) +02:50:23 zs_cal [R1 dm] P/C k10 0.9418/0.7897 k5 0.8778/0.6684 k3 0.8031/0.5596 | AUC knn 0.929 rf 0.975 | 1-NN 0.825 | MMD2 0.0270 (39.7 s) +02:50:59 zs_cal [R2 raw] AUC knn 0.973 rf 0.986 | 1-NN 0.909 | MMD2 0.0442 (33.8 s) +02:51:32 zs_cal [R2 dm] AUC knn 0.937 rf 0.975 | 1-NN 0.838 | MMD2 0.0270 (32.9 s) +02:51:41 zs_cal E_N[pc] sq 2.8830 (LB 157.071 UB 199.279 Dif 278.757) l2 2.4920 (8.8 s) +02:52:31 zs_cal E_N[all] sq 2.7462 (LB 127.720 UB 164.490 Dif 228.698) l2 2.4257 (49.5 s) +02:52:31 zs_cal done in 226 s +02:52:51 lora5: lora__raw.npz sha 0247d8795d1a (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:53:30 lora5 [R1 raw] P/C k10 0.9508/0.7310 k5 0.8806/0.6156 k3 0.7997/0.5186 | AUC knn 0.934 rf 0.965 | 1-NN 0.834 | MMD2 0.0271 (37.1 s) +02:54:10 lora5 [R1 dm] P/C k10 0.9746/0.9570 k5 0.9339/0.8884 k3 0.8839/0.7945 | AUC knn 0.869 rf 0.943 | 1-NN 0.727 | MMD2 0.0126 (40.4 s) +02:54:45 lora5 [R2 raw] AUC knn 0.943 rf 0.962 | 1-NN 0.848 | MMD2 0.0269 (31.9 s) +02:55:19 lora5 [R2 dm] AUC knn 0.876 rf 0.938 | 1-NN 0.738 | MMD2 0.0123 (34.3 s) +02:55:33 lora5 E_N[pc] sq 1.5397 (LB 150.364 UB 203.503 Dif 232.183) l2 1.4723 (13.8 s) +02:56:35 lora5 E_N[all] sq 1.5993 (LB 125.574 UB 166.659 Dif 191.282) l2 1.5243 (61.0 s) +02:56:35 lora5 done in 244 s +02:56:37 zs_pseudo: zs__pseudo_all.npz sha 1cc907457cef (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +02:57:20 zs_pseudo [R1 raw] P/C k10 0.9384/0.5252 k5 0.8725/0.4244 k3 0.7964/0.3536 | AUC knn 0.959 rf 0.989 | 1-NN 0.891 | MMD2 0.0452 (40.9 s) +02:57:59 zs_pseudo [R1 dm] P/C k10 0.9654/0.7493 k5 0.9208/0.6278 k3 0.8688/0.5327 | AUC knn 0.928 rf 0.982 | 1-NN 0.832 | MMD2 0.0306 (38.9 s) +02:58:35 zs_pseudo [R2 raw] AUC knn 0.968 rf 0.989 | 1-NN 0.906 | MMD2 0.0449 (33.3 s) +02:59:09 zs_pseudo [R2 dm] AUC knn 0.937 rf 0.982 | 1-NN 0.843 | MMD2 0.0302 (34.7 s) +02:59:19 zs_pseudo E_N[pc] sq 2.0376 (LB 144.119 UB 201.720 Dif 261.486) l2 1.8236 (9.9 s) +03:00:15 zs_pseudo E_N[all] sq 2.2039 (LB 121.675 UB 165.242 Dif 217.692) l2 1.9871 (55.5 s) +03:00:15 zs_pseudo done in 221 s +03:00:27 scsemi5: scsemi5__raw.npz sha 6d91c94152da (receipt verified), 153000 scored cells, 15300 in the P/C subsample (same rows as the scorer) +03:01:05 scsemi5 [R1 raw] P/C k10 0.5295/0.0336 k5 0.3322/0.0237 k3 0.2356/0.0182 | AUC knn 0.998 rf 1.000 | 1-NN 0.995 | MMD2 0.1837 (35.4 s) +03:01:45 scsemi5 [R1 dm] P/C k10 0.8352/0.2554 k5 0.7254/0.1818 k3 0.6163/0.1388 | AUC knn 0.989 rf 1.000 | 1-NN 0.965 | MMD2 0.0944 (39.9 s) +03:02:19 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.996 | MMD2 0.1851 (32.3 s) +03:02:57 scsemi5 [R2 dm] AUC knn 0.988 rf 1.000 | 1-NN 0.968 | MMD2 0.0945 (38.0 s) +03:03:07 scsemi5 E_N[pc] sq 2.7490 (LB 109.016 UB 202.110 Dif 364.929) l2 2.2311 (10.0 s) +03:04:09 scsemi5 E_N[all] sq 3.6145 (LB 98.276 UB 163.104 Dif 332.600) l2 2.7399 (61.4 s) +03:04:09 scsemi5 done in 233 s +03:04:09 unit draw4 of immicro written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/immicro/fewshot_n5/draw4 in 1427.8 s (k=10 max |diff| vs scorer 0.00e+00) +JOB_EXIT 0 7231s --design fewshot --dataset immicro --draws 0,1,2,3,4 --threads 6 +JOB_START 2026-10-02T03:04:09+09:00 --design pooled --dataset immicro --threads 8 +03:04:10 immicro pooled : 107 scored samples; fitting the scorer's view +03:04:16 bandwidth m (median pairwise distance of R1, PCA-50) = 21.6919 +03:04:21 observed cells: 392251 in 107 samples; R1/R2 rebuilt = reference.npz; R3 16050 cells (0 samples with fewer than n) +03:05:51 real_R2 [R1 raw] P/C k10 0.9634/0.9999 k5 0.9054/0.9875 k3 0.8328/0.9305 | AUC knn 0.504 rf 0.581 | 1-NN 0.499 | MMD2 0.0000 (45.3 s) +03:06:33 real_R2 [R1 dm] P/C k10 0.9635/0.9997 k5 0.9051/0.9874 k3 0.8292/0.9285 | AUC knn 0.507 rf 0.577 | 1-NN 0.498 | MMD2 0.0000 (41.7 s) +03:07:13 real_R3 [R2 raw] AUC knn 0.505 rf 0.507 | 1-NN 0.497 | MMD2 -0.0000 (37.3 s) +03:07:52 real_R3 [R2 dm] AUC knn 0.503 rf 0.499 | 1-NN 0.497 | MMD2 -0.0000 (39.2 s) +03:08:02 real_R2 E_N[pc] sq 0.5153 (LB 145.646 UB 208.210 Dif 177.887) l2 0.5304 (9.4 s) +03:09:21 real_R2 E_N[all] sq 0.3833 (LB 125.548 UB 174.691 Dif 144.385) l2 0.3975 (56.7 s) +03:09:21 fetching generated/immicro/pooled/zs__raw.npz (3.59 GiB) from spark-0110 +03:09:57 zs__raw: zs__raw.npz sha b4cb4d906c11 (receipt verified), 160500 scored cells, 16050 in the P/C subsample (same rows as the scorer) +03:10:34 zs__raw [R1 raw] P/C k10 0.6804/0.1918 k5 0.5179/0.1279 k3 0.4005/0.0924 | AUC knn 0.995 rf 0.998 | 1-NN 0.978 | MMD2 0.0998 (35.1 s) +03:11:07 zs__raw [R1 dm] P/C k10 0.6598/0.2175 k5 0.5027/0.1402 k3 0.3953/0.1001 | AUC knn 0.995 rf 0.998 | 1-NN 0.975 | MMD2 0.0944 (33.2 s) +03:11:42 zs__raw [R2 raw] AUC knn 0.996 rf 0.998 | 1-NN 0.982 | MMD2 0.1019 (32.0 s) +03:12:09 zs__raw [R2 dm] AUC knn 0.996 rf 0.998 | 1-NN 0.979 | MMD2 0.0959 (27.4 s) +03:12:20 zs__raw E_N[pc] sq 24.9294 (LB 171.129 UB 180.324 Dif 400.371) l2 12.4541 (11.0 s) +03:13:23 zs__raw E_N[all] sq 4.8323 (LB 120.412 UB 159.686 Dif 310.194) l2 3.7584 (61.8 s) +03:13:23 zs__raw done in 242 s +03:13:24 fetching generated/immicro/pooled/zs__cal.npz (3.59 GiB) from spark-0110 +03:13:57 zs__cal: zs__cal.npz sha 891855a7869f (receipt verified), 160500 scored cells, 16050 in the P/C subsample (same rows as the scorer) +03:14:32 zs__cal [R1 raw] P/C k10 0.9050/0.5272 k5 0.8069/0.4190 k3 0.7130/0.3435 | AUC knn 0.967 rf 0.986 | 1-NN 0.899 | MMD2 0.0423 (32.8 s) +03:15:10 zs__cal [R1 dm] P/C k10 0.9444/0.7690 k5 0.8801/0.6516 k3 0.8072/0.5501 | AUC knn 0.934 rf 0.976 | 1-NN 0.829 | MMD2 0.0264 (37.6 s) +03:15:43 zs__cal [R2 raw] AUC knn 0.973 rf 0.986 | 1-NN 0.914 | MMD2 0.0425 (30.6 s) +03:16:17 zs__cal [R2 dm] AUC knn 0.943 rf 0.976 | 1-NN 0.846 | MMD2 0.0265 (34.0 s) +03:16:29 zs__cal E_N[pc] sq 2.8467 (LB 150.277 UB 194.983 Dif 277.541) l2 2.4452 (11.5 s) +03:17:35 zs__cal E_N[all] sq 2.2626 (LB 113.647 UB 164.307 Dif 228.271) l2 1.9999 (65.5 s) +03:17:35 zs__cal done in 252 s +03:17:35 fetching generated/immicro/pooled/pseudo_full__cal.npz (3.59 GiB) from spark-0110 +03:18:09 pseudo_full__cal: pseudo_full__cal.npz sha e69d9efda3e1 (receipt verified), 160500 scored cells, 16050 in the P/C subsample (same rows as the scorer) +03:18:41 pseudo_full__cal [R1 raw] P/C k10 0.8047/0.6233 k5 0.6564/0.4801 k3 0.5305/0.3704 | AUC knn 0.950 rf 0.953 | 1-NN 0.861 | MMD2 0.0338 (30.1 s) +03:19:16 pseudo_full__cal [R1 dm] P/C k10 0.9136/0.9194 k5 0.8260/0.8095 k3 0.7391/0.6957 | AUC knn 0.870 rf 0.917 | 1-NN 0.752 | MMD2 0.0152 (34.3 s) +03:19:46 pseudo_full__cal [R2 raw] AUC knn 0.952 rf 0.954 | 1-NN 0.861 | MMD2 0.0342 (28.1 s) +03:20:15 pseudo_full__cal [R2 dm] AUC knn 0.876 rf 0.917 | 1-NN 0.760 | MMD2 0.0153 (29.2 s) +03:20:26 pseudo_full__cal E_N[pc] sq 1.9874 (LB 158.065 UB 202.748 Dif 246.867) l2 1.8721 (10.6 s) +03:21:32 pseudo_full__cal E_N[all] sq 1.7669 (LB 121.549 UB 167.006 Dif 201.867) l2 1.6592 (65.1 s) +03:21:32 pseudo_full__cal done in 237 s +03:21:32 fetching generated/immicro/pooled/real_lora__raw.npz (3.59 GiB) from spark-0110 +03:22:06 real_lora__raw: real_lora__raw.npz sha 4798e6f93bb7 (receipt verified), 160500 scored cells, 16050 in the P/C subsample (same rows as the scorer) +03:22:41 real_lora__raw [R1 raw] P/C k10 0.9241/0.7843 k5 0.8341/0.6480 k3 0.7346/0.5335 | AUC knn 0.936 rf 0.954 | 1-NN 0.829 | MMD2 0.0264 (32.6 s) +03:23:16 real_lora__raw [R1 dm] P/C k10 0.9606/0.9623 k5 0.9093/0.8996 k3 0.8479/0.8113 | AUC knn 0.861 rf 0.931 | 1-NN 0.720 | MMD2 0.0115 (35.0 s) +03:23:45 real_lora__raw [R2 raw] AUC knn 0.941 rf 0.951 | 1-NN 0.842 | MMD2 0.0264 (26.2 s) +03:24:14 real_lora__raw [R2 dm] AUC knn 0.868 rf 0.927 | 1-NN 0.732 | MMD2 0.0114 (29.6 s) +03:24:30 real_lora__raw E_N[pc] sq 1.7767 (LB 152.474 UB 199.385 Dif 235.822) l2 1.6865 (15.3 s) +03:25:38 real_lora__raw E_N[all] sq 1.5604 (LB 118.936 UB 166.415 Dif 193.023) l2 1.4883 (67.0 s) +03:25:38 real_lora__raw done in 246 s +03:25:38 fetching generated/immicro/pooled/zs__pseudo.npz (3.59 GiB) from spark-0110 +03:26:12 zs__pseudo: zs__pseudo.npz sha cb80013ee366 (receipt verified), 160500 scored cells, 16050 in the P/C subsample (same rows as the scorer) +03:26:49 zs__pseudo [R1 raw] P/C k10 0.9362/0.5244 k5 0.8701/0.4274 k3 0.7941/0.3553 | AUC knn 0.959 rf 0.989 | 1-NN 0.894 | MMD2 0.0435 (34.4 s) +03:27:28 zs__pseudo [R1 dm] P/C k10 0.9653/0.7406 k5 0.9188/0.6269 k3 0.8671/0.5264 | AUC knn 0.927 rf 0.983 | 1-NN 0.834 | MMD2 0.0296 (38.4 s) +03:28:02 zs__pseudo [R2 raw] AUC knn 0.967 rf 0.989 | 1-NN 0.908 | MMD2 0.0433 (32.1 s) +03:29:10 zs__pseudo [R2 dm] AUC knn 0.938 rf 0.982 | 1-NN 0.848 | MMD2 0.0293 (68.2 s) +03:29:34 zs__pseudo E_N[pc] sq 2.0860 (LB 138.886 UB 197.433 Dif 261.015) l2 1.8578 (23.8 s) +03:30:41 zs__pseudo E_N[all] sq 1.9504 (LB 110.001 UB 165.123 Dif 217.511) l2 1.7518 (65.9 s) +03:30:41 zs__pseudo done in 303 s +03:30:41 unit pooled of immicro written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/immicro/pooled in 1591.2 s (k=10 max |diff| vs scorer 0.00e+00) +03:30:41 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/immicro/pooled/zs__raw.npz +03:30:41 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/immicro/pooled/zs__cal.npz +03:30:41 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/immicro/pooled/pseudo_full__cal.npz +03:30:41 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/immicro/pooled/real_lora__raw.npz +03:30:41 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/immicro/pooled/zs__pseudo.npz +JOB_EXIT 0 1593s --design pooled --dataset immicro --threads 8 +JOB_START 2026-10-02T03:30:42+09:00 --design pooled --dataset ye2026_sepsis --threads 8 +03:30:42 ye2026_sepsis pooled : 82 scored samples; fitting the scorer's view +03:30:47 bandwidth m (median pairwise distance of R1, PCA-50) = 27.9359 +03:30:54 observed cells: 589478 in 82 samples; R1/R2 rebuilt = reference.npz; R3 12300 cells (0 samples with fewer than n) +03:32:16 real_R2 [R1 raw] P/C k10 0.9805/0.9997 k5 0.9363/0.9869 k3 0.8677/0.9219 | AUC knn 0.517 rf 0.587 | 1-NN 0.508 | MMD2 0.0000 (30.8 s) +03:32:44 real_R2 [R1 dm] P/C k10 0.9796/0.9998 k5 0.9327/0.9854 k3 0.8682/0.9211 | AUC knn 0.514 rf 0.581 | 1-NN 0.503 | MMD2 0.0000 (28.1 s) +03:33:14 real_R3 [R2 raw] AUC knn 0.506 rf 0.497 | 1-NN 0.503 | MMD2 -0.0000 (28.1 s) +03:33:39 real_R3 [R2 dm] AUC knn 0.503 rf 0.502 | 1-NN 0.502 | MMD2 -0.0000 (24.8 s) +03:33:52 real_R2 E_N[pc] sq 0.2239 (LB 154.922 UB 297.587 Dif 186.861) l2 0.2390 (12.2 s) +03:35:39 real_R2 E_N[all] sq 0.1100 (LB 124.464 UB 209.197 Dif 133.786) l2 0.1151 (81.8 s) +03:35:40 fetching generated/ye2026_sepsis/pooled/zs__raw.npz (2.75 GiB) from spark-0110 +03:36:07 zs__raw: zs__raw.npz sha 6aeaf164f3b9 (receipt verified), 123000 scored cells, 12300 in the P/C subsample (same rows as the scorer) +03:36:30 zs__raw [R1 raw] P/C k10 0.6141/0.0673 k5 0.4287/0.0436 k3 0.3086/0.0316 | AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1897 (21.2 s) +03:36:54 zs__raw [R1 dm] P/C k10 0.5924/0.0646 k5 0.4129/0.0418 k3 0.2785/0.0289 | AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1916 (23.6 s) +03:37:14 zs__raw [R2 raw] AUC knn 0.998 rf 0.999 | 1-NN 0.991 | MMD2 0.1920 (18.4 s) +03:37:34 zs__raw [R2 dm] AUC knn 0.998 rf 0.999 | 1-NN 0.990 | MMD2 0.1937 (19.7 s) +03:37:46 zs__raw E_N[pc] sq 19.5823 (LB 235.659 UB 256.125 Dif 636.432) l2 15.4636 (11.7 s) +03:39:11 zs__raw E_N[all] sq 5.2885 (LB 135.568 UB 194.406 Dif 446.729) l2 4.2274 (84.3 s) +03:39:11 zs__raw done in 211 s +03:39:11 fetching generated/ye2026_sepsis/pooled/zs__cal.npz (2.75 GiB) from spark-0110 +03:39:37 zs__cal: zs__cal.npz sha 9e86f3818e84 (receipt verified), 123000 scored cells, 12300 in the P/C subsample (same rows as the scorer) +03:40:00 zs__cal [R1 raw] P/C k10 0.9034/0.4308 k5 0.7541/0.3051 k3 0.6114/0.2263 | AUC knn 0.981 rf 0.987 | 1-NN 0.933 | MMD2 0.0343 (20.5 s) +03:40:24 zs__cal [R1 dm] P/C k10 0.9111/0.6828 k5 0.7900/0.5321 k3 0.6643/0.4125 | AUC knn 0.956 rf 0.973 | 1-NN 0.873 | MMD2 0.0250 (24.0 s) +03:40:48 zs__cal [R2 raw] AUC knn 0.984 rf 0.988 | 1-NN 0.938 | MMD2 0.0340 (22.0 s) +03:41:08 zs__cal [R2 dm] AUC knn 0.959 rf 0.974 | 1-NN 0.880 | MMD2 0.0251 (19.8 s) +03:41:18 zs__cal E_N[pc] sq 1.4925 (LB 169.386 UB 284.809 Dif 341.649) l2 1.5222 (9.9 s) +03:42:36 zs__cal E_N[all] sq 1.9945 (LB 124.082 UB 198.589 Dif 272.683) l2 1.8719 (78.4 s) +03:42:36 zs__cal done in 206 s +03:42:37 fetching generated/ye2026_sepsis/pooled/pseudo_full__cal.npz (2.75 GiB) from spark-0110 +03:43:03 pseudo_full__cal: pseudo_full__cal.npz sha e61358e6f191 (receipt verified), 123000 scored cells, 12300 in the P/C subsample (same rows as the scorer) +03:43:27 pseudo_full__cal [R1 raw] P/C k10 0.8628/0.7255 k5 0.7150/0.5482 k3 0.5819/0.4145 | AUC knn 0.907 rf 0.910 | 1-NN 0.810 | MMD2 0.0124 (21.7 s) +03:43:50 pseudo_full__cal [R1 dm] P/C k10 0.8634/0.8923 k5 0.7377/0.7505 k3 0.6244/0.6093 | AUC knn 0.822 rf 0.870 | 1-NN 0.728 | MMD2 0.0058 (23.6 s) +03:44:10 pseudo_full__cal [R2 raw] AUC knn 0.901 rf 0.910 | 1-NN 0.795 | MMD2 0.0123 (17.9 s) +03:44:31 pseudo_full__cal [R2 dm] AUC knn 0.823 rf 0.874 | 1-NN 0.726 | MMD2 0.0059 (21.0 s) +03:44:41 pseudo_full__cal E_N[pc] sq 1.1508 (LB 183.814 UB 290.634 Dif 306.745) l2 1.1865 (10.3 s) +03:46:00 pseudo_full__cal E_N[all] sq 1.4021 (LB 129.484 UB 199.557 Dif 227.737) l2 1.3711 (77.8 s) +03:46:00 pseudo_full__cal done in 203 s +03:46:01 fetching generated/ye2026_sepsis/pooled/real_lora__raw.npz (2.75 GiB) from spark-0110 +03:46:27 real_lora__raw: real_lora__raw.npz sha 4f9ad139d192 (receipt verified), 123000 scored cells, 12300 in the P/C subsample (same rows as the scorer) +03:46:54 real_lora__raw [R1 raw] P/C k10 0.9257/0.8293 k5 0.8122/0.6720 k3 0.6845/0.5379 | AUC knn 0.890 rf 0.908 | 1-NN 0.790 | MMD2 0.0094 (25.0 s) +03:47:16 real_lora__raw [R1 dm] P/C k10 0.9335/0.9490 k5 0.8428/0.8463 k3 0.7432/0.7233 | AUC knn 0.806 rf 0.861 | 1-NN 0.711 | MMD2 0.0050 (22.5 s) +03:47:39 real_lora__raw [R2 raw] AUC knn 0.886 rf 0.901 | 1-NN 0.785 | MMD2 0.0089 (20.4 s) +03:47:59 real_lora__raw [R2 dm] AUC knn 0.805 rf 0.858 | 1-NN 0.710 | MMD2 0.0048 (20.3 s) +03:48:11 real_lora__raw E_N[pc] sq 1.0107 (LB 177.322 UB 286.218 Dif 287.377) l2 1.0702 (11.9 s) +03:49:52 real_lora__raw E_N[all] sq 1.1958 (LB 126.712 UB 199.056 Dif 213.222) l2 1.1984 (100.3 s) +03:49:52 real_lora__raw done in 232 s +03:49:52 fetching generated/ye2026_sepsis/pooled/zs__pseudo.npz (2.75 GiB) from spark-0110 +03:50:19 zs__pseudo: zs__pseudo.npz sha f9309743ead8 (receipt verified), 123000 scored cells, 12300 in the P/C subsample (same rows as the scorer) +03:50:45 zs__pseudo [R1 raw] P/C k10 0.9152/0.4800 k5 0.7729/0.3346 k3 0.6306/0.2490 | AUC knn 0.978 rf 0.983 | 1-NN 0.925 | MMD2 0.0290 (24.3 s) +03:51:10 zs__pseudo [R1 dm] P/C k10 0.9319/0.7457 k5 0.8361/0.5891 k3 0.7262/0.4654 | AUC knn 0.943 rf 0.963 | 1-NN 0.853 | MMD2 0.0192 (25.6 s) +03:51:31 zs__pseudo [R2 raw] AUC knn 0.980 rf 0.984 | 1-NN 0.930 | MMD2 0.0285 (18.6 s) +03:51:53 zs__pseudo [R2 dm] AUC knn 0.946 rf 0.966 | 1-NN 0.864 | MMD2 0.0192 (22.2 s) +03:52:05 zs__pseudo E_N[pc] sq 1.2461 (LB 167.683 UB 285.006 Dif 313.879) l2 1.3075 (11.7 s) +03:53:35 zs__pseudo E_N[all] sq 1.7008 (LB 124.060 UB 198.692 Dif 250.995) l2 1.6495 (89.1 s) +03:53:35 zs__pseudo done in 223 s +03:53:35 unit pooled of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/pooled in 1372.7 s (k=10 max |diff| vs scorer 0.00e+00) +03:53:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/ye2026_sepsis/pooled/zs__raw.npz +03:53:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/ye2026_sepsis/pooled/zs__cal.npz +03:53:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/ye2026_sepsis/pooled/pseudo_full__cal.npz +03:53:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/ye2026_sepsis/pooled/real_lora__raw.npz +03:53:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/ye2026_sepsis/pooled/zs__pseudo.npz +JOB_EXIT 0 1374s --design pooled --dataset ye2026_sepsis --threads 8 +JOB_START 2026-10-02T03:53:36+09:00 --design pooled --dataset imperial_eskd --threads 8 +03:53:37 imperial_eskd pooled : 157 scored samples; fitting the scorer's view +03:53:46 bandwidth m (median pairwise distance of R1, PCA-50) = 25.6056 +03:53:53 observed cells: 514260 in 157 samples; R1/R2 rebuilt = reference.npz; R3 22750 cells (7 samples with fewer than n) +03:56:10 real_R2 [R1 raw] P/C k10 0.9673/0.9997 k5 0.9105/0.9849 k3 0.8372/0.9158 | AUC knn 0.505 rf 0.557 | 1-NN 0.503 | MMD2 -0.0000 (74.4 s) +03:57:24 real_R2 [R1 dm] P/C k10 0.9667/0.9997 k5 0.9101/0.9837 k3 0.8357/0.9159 | AUC knn 0.503 rf 0.550 | 1-NN 0.506 | MMD2 -0.0000 (73.5 s) +03:58:28 real_R3 [R2 raw] AUC knn 0.496 rf 0.504 | 1-NN 0.499 | MMD2 -0.0000 (61.5 s) +03:59:31 real_R3 [R2 dm] AUC knn 0.495 rf 0.499 | 1-NN 0.499 | MMD2 -0.0000 (63.1 s) +03:59:48 real_R2 E_N[pc] sq 0.2346 (LB 187.090 UB 334.937 Dif 221.780) l2 0.2525 (16.2 s) +04:01:36 real_R2 E_N[all] sq 0.2788 (LB 153.636 UB 269.158 Dif 185.848) l2 0.2990 (76.1 s) +04:01:36 fetching generated/imperial_eskd/pooled/zs__raw.npz (5.27 GiB) from spark-0110 +04:02:28 zs__raw: zs__raw.npz sha 048a82bf2502 (receipt verified), 235500 scored cells, 23482 in the P/C subsample (same rows as the scorer) +04:03:33 zs__raw [R1 raw] P/C k10 0.4889/0.1120 k5 0.3106/0.0723 k3 0.2066/0.0496 | AUC knn 0.995 rf 0.998 | 1-NN 0.979 | MMD2 0.2486 (62.2 s) +04:04:34 zs__raw [R1 dm] P/C k10 0.5658/0.1470 k5 0.3647/0.0949 k3 0.2391/0.0677 | AUC knn 0.994 rf 0.996 | 1-NN 0.972 | MMD2 0.2294 (60.9 s) +04:05:31 zs__raw [R2 raw] AUC knn 0.995 rf 0.998 | 1-NN 0.981 | MMD2 0.2496 (53.7 s) +04:06:25 zs__raw [R2 dm] AUC knn 0.995 rf 0.997 | 1-NN 0.974 | MMD2 0.2299 (54.1 s) +04:06:43 zs__raw E_N[pc] sq 6.3848 (LB 233.111 UB 296.265 Dif 636.338) l2 4.9794 (17.8 s) +04:08:17 zs__raw E_N[all] sq 4.0516 (LB 167.087 UB 246.489 Dif 488.798) l2 3.2025 (92.4 s) +04:08:17 zs__raw done in 401 s +04:08:17 fetching generated/imperial_eskd/pooled/zs__cal.npz (5.27 GiB) from spark-0110 +04:09:09 zs__cal: zs__cal.npz sha 3017737d0590 (receipt verified), 235500 scored cells, 23482 in the P/C subsample (same rows as the scorer) +04:10:12 zs__cal [R1 raw] P/C k10 0.8417/0.6393 k5 0.7095/0.4896 k3 0.5890/0.3765 | AUC knn 0.959 rf 0.966 | 1-NN 0.874 | MMD2 0.0199 (60.4 s) +04:11:13 zs__cal [R1 dm] P/C k10 0.8640/0.6882 k5 0.7583/0.5382 k3 0.6452/0.4180 | AUC knn 0.948 rf 0.965 | 1-NN 0.859 | MMD2 0.0216 (61.3 s) +04:12:07 zs__cal [R2 raw] AUC knn 0.961 rf 0.967 | 1-NN 0.881 | MMD2 0.0197 (51.1 s) +04:12:59 zs__cal [R2 dm] AUC knn 0.950 rf 0.966 | 1-NN 0.864 | MMD2 0.0215 (52.4 s) +04:13:18 zs__cal E_N[pc] sq 1.1320 (LB 196.656 UB 321.807 Dif 338.324) l2 1.1370 (18.8 s) +04:14:51 zs__cal E_N[all] sq 1.1942 (LB 151.760 UB 255.996 Dif 276.235) l2 1.1750 (92.1 s) +04:14:51 zs__cal done in 395 s +04:14:52 fetching generated/imperial_eskd/pooled/pseudo_full__cal.npz (5.27 GiB) from spark-0110 +04:15:42 pseudo_full__cal: pseudo_full__cal.npz sha 73dc9ca72ade (receipt verified), 235500 scored cells, 23482 in the P/C subsample (same rows as the scorer) +04:16:44 pseudo_full__cal [R1 raw] P/C k10 0.6913/0.5552 k5 0.5343/0.4185 k3 0.4144/0.3230 | AUC knn 0.903 rf 0.916 | 1-NN 0.788 | MMD2 0.0255 (60.2 s) +04:17:44 pseudo_full__cal [R1 dm] P/C k10 0.7564/0.7710 k5 0.6054/0.5933 k3 0.4802/0.4510 | AUC knn 0.834 rf 0.878 | 1-NN 0.722 | MMD2 0.0113 (60.2 s) +04:18:40 pseudo_full__cal [R2 raw] AUC knn 0.902 rf 0.919 | 1-NN 0.783 | MMD2 0.0252 (52.7 s) +04:19:37 pseudo_full__cal [R2 dm] AUC knn 0.837 rf 0.882 | 1-NN 0.724 | MMD2 0.0113 (57.3 s) +04:19:54 pseudo_full__cal E_N[pc] sq 1.3930 (LB 230.267 UB 327.372 Dif 365.533) l2 1.4106 (16.9 s) +04:21:16 pseudo_full__cal E_N[all] sq 1.4080 (LB 170.508 UB 258.865 Dif 294.912) l2 1.3720 (81.3 s) +04:21:16 pseudo_full__cal done in 385 s +04:21:17 fetching generated/imperial_eskd/pooled/real_lora__raw.npz (5.27 GiB) from spark-0110 +04:22:06 real_lora__raw: real_lora__raw.npz sha a22e55bb1651 (receipt verified), 235500 scored cells, 23482 in the P/C subsample (same rows as the scorer) +04:23:06 real_lora__raw [R1 raw] P/C k10 0.8475/0.8500 k5 0.7190/0.6966 k3 0.6057/0.5602 | AUC knn 0.864 rf 0.871 | 1-NN 0.751 | MMD2 0.0113 (56.8 s) +04:24:03 real_lora__raw [R1 dm] P/C k10 0.8881/0.9371 k5 0.7786/0.8099 k3 0.6715/0.6747 | AUC knn 0.818 rf 0.853 | 1-NN 0.712 | MMD2 0.0067 (57.5 s) +04:24:58 real_lora__raw [R2 raw] AUC knn 0.866 rf 0.870 | 1-NN 0.751 | MMD2 0.0112 (52.5 s) +04:25:52 real_lora__raw [R2 dm] AUC knn 0.817 rf 0.853 | 1-NN 0.709 | MMD2 0.0068 (54.0 s) +04:26:10 real_lora__raw E_N[pc] sq 1.0800 (LB 217.961 UB 322.313 Dif 330.659) l2 1.1057 (17.3 s) +04:27:41 real_lora__raw E_N[all] sq 1.1335 (LB 160.827 UB 256.500 Dif 269.271) l2 1.1222 (90.6 s) +04:27:41 real_lora__raw done in 385 s +04:27:42 fetching generated/imperial_eskd/pooled/zs__pseudo.npz (5.27 GiB) from spark-0110 +04:28:32 zs__pseudo: zs__pseudo.npz sha 464542acee65 (receipt verified), 235500 scored cells, 23482 in the P/C subsample (same rows as the scorer) +04:29:38 zs__pseudo [R1 raw] P/C k10 0.8427/0.7037 k5 0.7108/0.5408 k3 0.5853/0.4164 | AUC knn 0.957 rf 0.965 | 1-NN 0.867 | MMD2 0.0175 (63.0 s) +04:30:37 zs__pseudo [R1 dm] P/C k10 0.8849/0.7316 k5 0.7720/0.5761 k3 0.6614/0.4562 | AUC knn 0.947 rf 0.967 | 1-NN 0.853 | MMD2 0.0191 (59.7 s) +04:31:30 zs__pseudo [R2 raw] AUC knn 0.961 rf 0.965 | 1-NN 0.874 | MMD2 0.0174 (49.7 s) +04:32:23 zs__pseudo [R2 dm] AUC knn 0.949 rf 0.967 | 1-NN 0.858 | MMD2 0.0192 (53.0 s) +04:32:43 zs__pseudo E_N[pc] sq 1.0221 (LB 193.629 UB 321.939 Dif 324.769) l2 1.0318 (20.3 s) +04:34:25 zs__pseudo E_N[all] sq 1.1020 (LB 149.752 UB 255.885 Dif 266.712) l2 1.0930 (100.1 s) +04:34:25 zs__pseudo done in 403 s +04:34:25 unit pooled of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/pooled in 2448.6 s (k=10 max |diff| vs scorer 0.00e+00) +04:34:25 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/pooled/zs__raw.npz +04:34:25 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/pooled/zs__cal.npz +04:34:25 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/pooled/pseudo_full__cal.npz +04:34:26 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/pooled/real_lora__raw.npz +04:34:26 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/pooled/zs__pseudo.npz +JOB_EXIT 0 2450s --design pooled --dataset imperial_eskd --threads 8 +UNIT_EXIT 0 diff --git a/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraB_20261002T000131.jobs b/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraB_20261002T000131.jobs new file mode 100644 index 0000000000000000000000000000000000000000..997ccb7bd0d31574de45a203158bb96d4dc36766 --- /dev/null +++ b/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraB_20261002T000131.jobs @@ -0,0 +1,3 @@ +--design fewshot --dataset ye2026_sepsis --draws 0,1,2,3,4 --threads 6 +--design fewshot --dataset imperial_eskd --draws 0,1,2,3,4 --threads 6 +--design pooled --dataset imperial_eskd --threads 8 diff --git a/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraB_20261002T000131.log b/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraB_20261002T000131.log new file mode 100644 index 0000000000000000000000000000000000000000..a8380067e4809a9949d5c2df8907abac27182192 --- /dev/null +++ b/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/logs/extraB_20261002T000131.log @@ -0,0 +1,542 @@ +JOB_START 2026-10-02T00:01:31+09:00 --design fewshot --dataset ye2026_sepsis --draws 0,1,2,3,4 --threads 6 +00:01:32 ye2026_sepsis fewshot draw0 : 77 scored samples; fitting the scorer's view +00:01:36 bandwidth m (median pairwise distance of R1, PCA-50) = 27.7080 +00:01:44 observed cells: 556369 in 77 samples; R1/R2 rebuilt = reference.npz; R3 11550 cells (0 samples with fewer than n) +00:03:05 real_R2 [R1 raw] P/C k10 0.9815/0.9997 k5 0.9389/0.9890 k3 0.8719/0.9258 | AUC knn 0.517 rf 0.598 | 1-NN 0.507 | MMD2 0.0000 (32.5 s) +00:03:38 real_R2 [R1 dm] P/C k10 0.9810/0.9997 k5 0.9351/0.9884 k3 0.8657/0.9220 | AUC knn 0.515 rf 0.590 | 1-NN 0.506 | MMD2 0.0000 (32.3 s) +00:04:08 real_R3 [R2 raw] AUC knn 0.498 rf 0.500 | 1-NN 0.503 | MMD2 -0.0000 (28.0 s) +00:04:35 real_R3 [R2 dm] AUC knn 0.498 rf 0.493 | 1-NN 0.506 | MMD2 -0.0000 (27.4 s) +00:04:44 real_R2 E_N[pc] sq 0.2106 (LB 155.320 UB 303.922 Dif 186.618) l2 0.2258 (8.6 s) +00:06:22 real_R2 E_N[all] sq 0.0951 (LB 124.845 UB 212.601 Dif 133.193) l2 0.0999 (73.8 s) +00:06:36 zs_raw: zs__raw_all.npz sha bcb34be0a83c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:07:01 zs_raw [R1 raw] P/C k10 0.6338/0.0753 k5 0.4709/0.0482 k3 0.3682/0.0339 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1881 (23.2 s) +00:07:24 zs_raw [R1 dm] P/C k10 0.6034/0.0731 k5 0.4371/0.0457 k3 0.3444/0.0314 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1900 (22.3 s) +00:07:47 zs_raw [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1906 (21.2 s) +00:08:07 zs_raw [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1926 (20.4 s) +00:08:17 zs_raw E_N[pc] sq 16.8781 (LB 240.335 UB 263.778 Dif 635.997) l2 13.4746 (9.7 s) +00:09:42 zs_raw E_N[all] sq 5.1221 (LB 139.571 UB 199.136 Dif 444.672) l2 4.0300 (84.6 s) +00:09:42 zs_raw done in 200 s +00:09:58 zs_cal: zs__cal.npz sha 79a2764df017 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:10:25 zs_cal [R1 raw] P/C k10 0.8962/0.4681 k5 0.7423/0.3280 k3 0.5964/0.2439 | AUC knn 0.981 rf 0.985 | 1-NN 0.930 | MMD2 0.0373 (25.5 s) +00:10:49 zs_cal [R1 dm] P/C k10 0.9131/0.6859 k5 0.7894/0.5279 k3 0.6582/0.4091 | AUC knn 0.957 rf 0.971 | 1-NN 0.872 | MMD2 0.0286 (24.3 s) +00:11:12 zs_cal [R2 raw] AUC knn 0.983 rf 0.986 | 1-NN 0.936 | MMD2 0.0365 (21.2 s) +00:11:35 zs_cal [R2 dm] AUC knn 0.958 rf 0.972 | 1-NN 0.881 | MMD2 0.0281 (22.3 s) +00:11:47 zs_cal E_N[pc] sq 1.3623 (LB 170.752 UB 291.526 Dif 335.282) l2 1.4013 (11.9 s) +00:13:12 zs_cal E_N[all] sq 1.8640 (LB 126.821 UB 203.226 Dif 269.236) l2 1.7439 (84.9 s) +00:13:12 zs_cal done in 210 s +00:13:28 lora5: lora__raw.npz sha 9250ea293b8c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:13:56 lora5 [R1 raw] P/C k10 0.9268/0.7059 k5 0.8023/0.5426 k3 0.6721/0.4229 | AUC knn 0.938 rf 0.946 | 1-NN 0.842 | MMD2 0.0215 (25.6 s) +00:14:20 lora5 [R1 dm] P/C k10 0.9396/0.8258 k5 0.8441/0.6855 k3 0.7362/0.5594 | AUC knn 0.899 rf 0.924 | 1-NN 0.794 | MMD2 0.0199 (23.9 s) +00:14:44 lora5 [R2 raw] AUC knn 0.939 rf 0.944 | 1-NN 0.844 | MMD2 0.0209 (22.5 s) +00:15:07 lora5 [R2 dm] AUC knn 0.896 rf 0.920 | 1-NN 0.792 | MMD2 0.0196 (23.1 s) +00:15:20 lora5 E_N[pc] sq 1.1792 (LB 180.756 UB 291.881 Dif 311.800) l2 1.2241 (12.1 s) +00:16:58 lora5 E_N[all] sq 1.4218 (LB 129.801 UB 203.637 Dif 234.782) l2 1.3699 (98.2 s) +00:16:58 lora5 done in 226 s +00:17:11 zs_pseudo: zs__pseudo_all.npz sha ae3cc44a4534 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:17:37 zs_pseudo [R1 raw] P/C k10 0.9193/0.5025 k5 0.7855/0.3575 k3 0.6390/0.2670 | AUC knn 0.976 rf 0.983 | 1-NN 0.920 | MMD2 0.0285 (23.9 s) +00:18:02 zs_pseudo [R1 dm] P/C k10 0.9350/0.7568 k5 0.8341/0.5962 k3 0.7246/0.4667 | AUC knn 0.947 rf 0.964 | 1-NN 0.857 | MMD2 0.0192 (24.1 s) +00:18:25 zs_pseudo [R2 raw] AUC knn 0.979 rf 0.984 | 1-NN 0.928 | MMD2 0.0279 (21.6 s) +00:18:47 zs_pseudo [R2 dm] AUC knn 0.947 rf 0.966 | 1-NN 0.855 | MMD2 0.0189 (22.4 s) +00:18:59 zs_pseudo E_N[pc] sq 1.1455 (LB 170.141 UB 292.623 Dif 310.446) l2 1.2205 (11.4 s) +00:20:24 zs_pseudo E_N[all] sq 1.6131 (LB 126.808 UB 203.398 Dif 250.356) l2 1.5578 (84.3 s) +00:20:24 zs_pseudo done in 205 s +00:20:33 scsemi5: scsemi5__raw.npz sha 80d99f5363d0 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:20:58 scsemi5 [R1 raw] P/C k10 0.7842/0.0617 k5 0.5822/0.0404 k3 0.4285/0.0285 | AUC knn 0.998 rf 1.000 | 1-NN 0.993 | MMD2 0.2125 (23.1 s) +00:21:22 scsemi5 [R1 dm] P/C k10 0.5558/0.1102 k5 0.4189/0.0668 k3 0.3200/0.0442 | AUC knn 0.997 rf 1.000 | 1-NN 0.989 | MMD2 0.1475 (24.6 s) +00:21:47 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.2132 (23.0 s) +00:22:09 scsemi5 [R2 dm] AUC knn 0.997 rf 1.000 | 1-NN 0.990 | MMD2 0.1470 (22.4 s) +00:22:19 scsemi5 E_N[pc] sq 2.2144 (LB 107.210 UB 291.274 Dif 514.795) l2 1.8818 (9.9 s) +00:23:43 scsemi5 E_N[all] sq 4.4232 (LB 107.359 UB 200.718 Dif 520.303) l2 3.1330 (83.5 s) +00:23:43 scsemi5 done in 199 s +00:23:43 unit draw0 of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/fewshot_n5/draw0 in 1331.2 s (k=10 max |diff| vs scorer 0.00e+00) +00:23:43 ye2026_sepsis fewshot draw1 : 77 scored samples; fitting the scorer's view +00:23:48 bandwidth m (median pairwise distance of R1, PCA-50) = 27.5059 +00:23:49 observed cells: 556805 in 77 samples; R1/R2 rebuilt = reference.npz; R3 11550 cells (0 samples with fewer than n) +00:25:06 real_R2 [R1 raw] P/C k10 0.9817/0.9996 k5 0.9401/0.9859 k3 0.8729/0.9255 | AUC knn 0.518 rf 0.597 | 1-NN 0.507 | MMD2 0.0000 (33.0 s) +00:25:40 real_R2 [R1 dm] P/C k10 0.9815/0.9997 k5 0.9386/0.9854 k3 0.8707/0.9239 | AUC knn 0.512 rf 0.594 | 1-NN 0.507 | MMD2 0.0000 (33.9 s) +00:26:10 real_R3 [R2 raw] AUC knn 0.502 rf 0.495 | 1-NN 0.502 | MMD2 -0.0000 (27.4 s) +00:26:39 real_R3 [R2 dm] AUC knn 0.498 rf 0.497 | 1-NN 0.499 | MMD2 -0.0000 (29.2 s) +00:26:49 real_R2 E_N[pc] sq 0.2122 (LB 156.538 UB 304.780 Dif 187.988) l2 0.2227 (9.8 s) +00:28:22 real_R2 E_N[all] sq 0.1031 (LB 125.007 UB 215.767 Dif 134.366) l2 0.1073 (74.9 s) +00:28:24 zs_raw: zs__raw_all.npz sha bcb34be0a83c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:28:51 zs_raw [R1 raw] P/C k10 0.6130/0.0769 k5 0.4233/0.0481 k3 0.2990/0.0341 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1937 (24.6 s) +00:29:13 zs_raw [R1 dm] P/C k10 0.5745/0.0744 k5 0.4014/0.0454 k3 0.2861/0.0321 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1951 (22.2 s) +00:29:36 zs_raw [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1955 (21.6 s) +00:29:56 zs_raw [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1967 (19.6 s) +00:30:05 zs_raw E_N[pc] sq 17.9698 (LB 241.501 UB 263.486 Dif 636.561) l2 12.6370 (9.1 s) +00:31:35 zs_raw E_N[all] sq 5.4307 (LB 141.187 UB 197.242 Dif 445.608) l2 4.3015 (89.6 s) +00:31:35 zs_raw done in 193 s +00:31:50 zs_cal: zs__cal.npz sha af1cb58210f6 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:32:18 zs_cal [R1 raw] P/C k10 0.9042/0.3480 k5 0.7666/0.2390 k3 0.6165/0.1761 | AUC knn 0.984 rf 0.990 | 1-NN 0.946 | MMD2 0.0620 (26.0 s) +00:32:41 zs_cal [R1 dm] P/C k10 0.8990/0.5729 k5 0.7678/0.4291 k3 0.6456/0.3249 | AUC knn 0.968 rf 0.980 | 1-NN 0.900 | MMD2 0.0523 (23.6 s) +00:33:06 zs_cal [R2 raw] AUC knn 0.987 rf 0.991 | 1-NN 0.950 | MMD2 0.0622 (23.0 s) +00:33:29 zs_cal [R2 dm] AUC knn 0.968 rf 0.981 | 1-NN 0.904 | MMD2 0.0526 (22.7 s) +00:33:40 zs_cal E_N[pc] sq 1.5755 (LB 171.332 UB 292.251 Dif 361.840) l2 1.5609 (10.7 s) +00:35:16 zs_cal E_N[all] sq 2.2043 (LB 127.991 UB 201.538 Dif 290.115) l2 2.0302 (96.2 s) +00:35:16 zs_cal done in 221 s +00:35:32 lora5: lora__raw.npz sha 4a35cbcd1fa7 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:35:58 lora5 [R1 raw] P/C k10 0.9158/0.6619 k5 0.7970/0.5048 k3 0.6695/0.3942 | AUC knn 0.945 rf 0.953 | 1-NN 0.863 | MMD2 0.0321 (24.8 s) +00:36:20 lora5 [R1 dm] P/C k10 0.9192/0.8177 k5 0.8126/0.6797 k3 0.6990/0.5557 | AUC knn 0.904 rf 0.931 | 1-NN 0.795 | MMD2 0.0267 (22.3 s) +00:36:44 lora5 [R2 raw] AUC knn 0.948 rf 0.952 | 1-NN 0.865 | MMD2 0.0323 (22.1 s) +00:37:06 lora5 [R2 dm] AUC knn 0.903 rf 0.930 | 1-NN 0.803 | MMD2 0.0270 (21.1 s) +00:37:16 lora5 E_N[pc] sq 1.2977 (LB 180.411 UB 292.499 Dif 325.867) l2 1.2921 (10.6 s) +00:38:59 lora5 E_N[all] sq 1.6095 (LB 130.588 UB 201.614 Dif 244.904) l2 1.5251 (102.2 s) +00:38:59 lora5 done in 222 s +00:39:01 zs_pseudo: zs__pseudo_all.npz sha ae3cc44a4534 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:39:26 zs_pseudo [R1 raw] P/C k10 0.9208/0.5048 k5 0.7939/0.3636 k3 0.6571/0.2708 | AUC knn 0.977 rf 0.982 | 1-NN 0.920 | MMD2 0.0290 (23.6 s) +00:39:53 zs_pseudo [R1 dm] P/C k10 0.9358/0.7634 k5 0.8401/0.6026 k3 0.7332/0.4780 | AUC knn 0.945 rf 0.964 | 1-NN 0.853 | MMD2 0.0195 (26.6 s) +00:40:16 zs_pseudo [R2 raw] AUC knn 0.979 rf 0.983 | 1-NN 0.928 | MMD2 0.0286 (21.4 s) +00:40:39 zs_pseudo [R2 dm] AUC knn 0.948 rf 0.967 | 1-NN 0.862 | MMD2 0.0196 (23.3 s) +00:40:48 zs_pseudo E_N[pc] sq 1.1451 (LB 170.596 UB 293.539 Dif 311.379) l2 1.1891 (9.1 s) +00:42:33 zs_pseudo E_N[all] sq 1.6751 (LB 127.896 UB 201.668 Dif 251.473) l2 1.6236 (104.2 s) +00:42:33 zs_pseudo done in 214 s +00:42:42 scsemi5: scsemi5__raw.npz sha f2f4b09d2711 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:43:12 scsemi5 [R1 raw] P/C k10 0.7484/0.0826 k5 0.5590/0.0591 k3 0.4339/0.0419 | AUC knn 0.997 rf 1.000 | 1-NN 0.989 | MMD2 0.1611 (27.7 s) +00:43:36 scsemi5 [R1 dm] P/C k10 0.4490/0.1782 k5 0.3096/0.1087 k3 0.2175/0.0747 | AUC knn 0.996 rf 0.999 | 1-NN 0.982 | MMD2 0.1000 (24.0 s) +00:44:00 scsemi5 [R2 raw] AUC knn 0.998 rf 1.000 | 1-NN 0.992 | MMD2 0.1625 (23.2 s) +00:44:24 scsemi5 [R2 dm] AUC knn 0.996 rf 0.999 | 1-NN 0.984 | MMD2 0.1009 (23.3 s) +00:44:37 scsemi5 E_N[pc] sq 2.1931 (LB 121.169 UB 289.507 Dif 490.356) l2 1.9314 (13.2 s) +00:46:08 scsemi5 E_N[all] sq 3.7992 (LB 110.388 UB 198.193 Dif 443.977) l2 2.9602 (91.2 s) +00:46:08 scsemi5 done in 215 s +00:46:08 unit draw1 of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/fewshot_n5/draw1 in 1345.5 s (k=10 max |diff| vs scorer 0.00e+00) +00:46:09 ye2026_sepsis fewshot draw2 : 77 scored samples; fitting the scorer's view +00:46:13 bandwidth m (median pairwise distance of R1, PCA-50) = 27.9152 +00:46:14 observed cells: 560751 in 77 samples; R1/R2 rebuilt = reference.npz; R3 11550 cells (0 samples with fewer than n) +00:47:36 real_R2 [R1 raw] P/C k10 0.9816/0.9999 k5 0.9391/0.9859 k3 0.8769/0.9262 | AUC knn 0.517 rf 0.595 | 1-NN 0.508 | MMD2 0.0000 (32.0 s) +00:48:08 real_R2 [R1 dm] P/C k10 0.9798/0.9996 k5 0.9362/0.9868 k3 0.8698/0.9255 | AUC knn 0.514 rf 0.591 | 1-NN 0.508 | MMD2 0.0000 (31.7 s) +00:48:39 real_R3 [R2 raw] AUC knn 0.501 rf 0.499 | 1-NN 0.502 | MMD2 -0.0000 (29.6 s) +00:49:08 real_R3 [R2 dm] AUC knn 0.499 rf 0.505 | 1-NN 0.502 | MMD2 -0.0000 (28.8 s) +00:49:22 real_R2 E_N[pc] sq 0.2001 (LB 156.332 UB 313.913 Dif 187.867) l2 0.2130 (13.4 s) +00:51:20 real_R2 E_N[all] sq 0.0997 (LB 125.113 UB 214.000 Dif 133.971) l2 0.1054 (95.3 s) +00:51:23 zs_raw: zs__raw_all.npz sha bcb34be0a83c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:51:47 zs_raw [R1 raw] P/C k10 0.6405/0.0749 k5 0.4557/0.0471 k3 0.3365/0.0338 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1910 (22.8 s) +00:52:12 zs_raw [R1 dm] P/C k10 0.5964/0.0727 k5 0.4226/0.0448 k3 0.3010/0.0326 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1927 (25.3 s) +00:52:35 zs_raw [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1938 (20.4 s) +00:52:55 zs_raw [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1952 (19.8 s) +00:53:09 zs_raw E_N[pc] sq 13.2801 (LB 242.188 UB 272.080 Dif 639.152) l2 10.2735 (14.2 s) +00:54:34 zs_raw E_N[all] sq 4.8738 (LB 139.968 UB 202.964 Dif 447.001) l2 3.8834 (84.2 s) +00:54:34 zs_raw done in 194 s +00:54:50 zs_cal: zs__cal.npz sha 37f4d4a91f86 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:55:15 zs_cal [R1 raw] P/C k10 0.9041/0.4426 k5 0.7585/0.3088 k3 0.6072/0.2261 | AUC knn 0.982 rf 0.987 | 1-NN 0.936 | MMD2 0.0385 (23.8 s) +00:55:41 zs_cal [R1 dm] P/C k10 0.9118/0.6776 k5 0.7909/0.5220 k3 0.6719/0.4067 | AUC knn 0.958 rf 0.973 | 1-NN 0.874 | MMD2 0.0293 (26.2 s) +00:56:04 zs_cal [R2 raw] AUC knn 0.984 rf 0.987 | 1-NN 0.938 | MMD2 0.0383 (21.2 s) +00:56:27 zs_cal [R2 dm] AUC knn 0.959 rf 0.974 | 1-NN 0.883 | MMD2 0.0293 (22.5 s) +00:56:41 zs_cal E_N[pc] sq 1.3043 (LB 172.530 UB 301.581 Dif 340.850) l2 1.3363 (14.0 s) +00:58:24 zs_cal E_N[all] sq 1.8371 (LB 127.382 UB 207.220 Dif 274.054) l2 1.7293 (102.5 s) +00:58:24 zs_cal done in 230 s +00:58:40 lora5: lora__raw.npz sha 5cede88e4555 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +00:59:05 lora5 [R1 raw] P/C k10 0.9184/0.7606 k5 0.7972/0.6079 k3 0.6804/0.4895 | AUC knn 0.922 rf 0.939 | 1-NN 0.822 | MMD2 0.0191 (23.7 s) +00:59:32 lora5 [R1 dm] P/C k10 0.9366/0.8435 k5 0.8448/0.7133 k3 0.7515/0.5938 | AUC knn 0.881 rf 0.912 | 1-NN 0.777 | MMD2 0.0161 (27.0 s) +00:59:55 lora5 [R2 raw] AUC knn 0.921 rf 0.936 | 1-NN 0.818 | MMD2 0.0183 (20.6 s) +01:00:19 lora5 [R2 dm] AUC knn 0.883 rf 0.908 | 1-NN 0.777 | MMD2 0.0156 (24.3 s) +01:00:31 lora5 E_N[pc] sq 1.0234 (LB 179.952 UB 301.345 Dif 304.186) l2 1.0447 (12.2 s) +01:01:53 lora5 E_N[all] sq 1.2801 (LB 129.837 UB 207.575 Dif 229.352) l2 1.2466 (81.0 s) +01:01:53 lora5 done in 209 s +01:01:55 zs_pseudo: zs__pseudo_all.npz sha ae3cc44a4534 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:02:24 zs_pseudo [R1 raw] P/C k10 0.9171/0.5039 k5 0.7873/0.3612 k3 0.6387/0.2666 | AUC knn 0.977 rf 0.982 | 1-NN 0.922 | MMD2 0.0284 (27.3 s) +01:02:48 zs_pseudo [R1 dm] P/C k10 0.9384/0.7511 k5 0.8371/0.5973 k3 0.7280/0.4662 | AUC knn 0.947 rf 0.965 | 1-NN 0.858 | MMD2 0.0194 (24.7 s) +01:03:12 zs_pseudo [R2 raw] AUC knn 0.980 rf 0.984 | 1-NN 0.929 | MMD2 0.0278 (21.7 s) +01:03:36 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.967 | 1-NN 0.860 | MMD2 0.0192 (24.1 s) +01:03:47 zs_pseudo E_N[pc] sq 1.0725 (LB 171.136 UB 302.367 Dif 311.878) l2 1.1324 (10.7 s) +01:05:22 zs_pseudo E_N[all] sq 1.5511 (LB 127.256 UB 207.291 Dif 251.399) l2 1.5108 (94.5 s) +01:05:22 zs_pseudo done in 209 s +01:05:31 scsemi5: scsemi5__raw.npz sha 6662fd4e121f (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:05:56 scsemi5 [R1 raw] P/C k10 0.7821/0.0849 k5 0.6118/0.0602 k3 0.4783/0.0439 | AUC knn 0.997 rf 0.999 | 1-NN 0.988 | MMD2 0.1721 (24.0 s) +01:06:22 scsemi5 [R1 dm] P/C k10 0.5984/0.1610 k5 0.4406/0.1043 k3 0.3253/0.0730 | AUC knn 0.994 rf 0.999 | 1-NN 0.980 | MMD2 0.1109 (25.7 s) +01:06:44 scsemi5 [R2 raw] AUC knn 0.997 rf 1.000 | 1-NN 0.991 | MMD2 0.1725 (20.7 s) +01:07:08 scsemi5 [R2 dm] AUC knn 0.994 rf 0.999 | 1-NN 0.983 | MMD2 0.1105 (23.8 s) +01:07:21 scsemi5 E_N[pc] sq 1.9060 (LB 117.210 UB 300.654 Dif 466.860) l2 1.7074 (12.5 s) +01:08:53 scsemi5 E_N[all] sq 3.5462 (LB 109.643 UB 204.639 Dif 446.514) l2 2.7237 (91.8 s) +01:08:53 scsemi5 done in 211 s +01:08:53 unit draw2 of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/fewshot_n5/draw2 in 1364.5 s (k=10 max |diff| vs scorer 0.00e+00) +01:08:53 ye2026_sepsis fewshot draw3 : 77 scored samples; fitting the scorer's view +01:08:58 bandwidth m (median pairwise distance of R1, PCA-50) = 27.6395 +01:08:59 observed cells: 549877 in 77 samples; R1/R2 rebuilt = reference.npz; R3 11550 cells (0 samples with fewer than n) +01:10:15 real_R2 [R1 raw] P/C k10 0.9804/0.9997 k5 0.9369/0.9854 k3 0.8743/0.9229 | AUC knn 0.516 rf 0.597 | 1-NN 0.509 | MMD2 0.0000 (32.1 s) +01:10:47 real_R2 [R1 dm] P/C k10 0.9815/0.9999 k5 0.9385/0.9861 k3 0.8741/0.9219 | AUC knn 0.515 rf 0.591 | 1-NN 0.509 | MMD2 0.0000 (32.1 s) +01:11:18 real_R3 [R2 raw] AUC knn 0.501 rf 0.489 | 1-NN 0.505 | MMD2 -0.0000 (29.1 s) +01:11:48 real_R3 [R2 dm] AUC knn 0.500 rf 0.486 | 1-NN 0.504 | MMD2 -0.0000 (30.2 s) +01:11:58 real_R2 E_N[pc] sq 0.2122 (LB 154.768 UB 301.972 Dif 186.005) l2 0.2267 (9.5 s) +01:13:28 real_R2 E_N[all] sq 0.1035 (LB 123.103 UB 215.880 Dif 132.704) l2 0.1094 (67.8 s) +01:13:30 zs_raw: zs__raw_all.npz sha bcb34be0a83c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:13:55 zs_raw [R1 raw] P/C k10 0.6137/0.0767 k5 0.3945/0.0487 k3 0.2732/0.0352 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1874 (23.3 s) +01:14:20 zs_raw [R1 dm] P/C k10 0.5963/0.0729 k5 0.4188/0.0448 k3 0.3006/0.0320 | AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1895 (24.2 s) +01:14:42 zs_raw [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1908 (20.7 s) +01:15:03 zs_raw [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.988 | MMD2 0.1927 (21.1 s) +01:15:16 zs_raw E_N[pc] sq 18.7625 (LB 240.160 UB 261.136 Dif 633.710) l2 14.7481 (12.8 s) +01:16:51 zs_raw E_N[all] sq 4.9960 (LB 139.639 UB 200.487 Dif 443.638) l2 3.9591 (94.5 s) +01:16:51 zs_raw done in 203 s +01:17:05 zs_cal: zs__cal.npz sha f48fdecef0e2 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:17:30 zs_cal [R1 raw] P/C k10 0.8971/0.4345 k5 0.7499/0.3042 k3 0.5981/0.2249 | AUC knn 0.982 rf 0.987 | 1-NN 0.933 | MMD2 0.0350 (23.5 s) +01:17:55 zs_cal [R1 dm] P/C k10 0.9046/0.6709 k5 0.7795/0.5139 k3 0.6550/0.4022 | AUC knn 0.960 rf 0.973 | 1-NN 0.875 | MMD2 0.0262 (24.8 s) +01:18:18 zs_cal [R2 raw] AUC knn 0.984 rf 0.988 | 1-NN 0.937 | MMD2 0.0349 (20.9 s) +01:18:39 zs_cal [R2 dm] AUC knn 0.959 rf 0.973 | 1-NN 0.886 | MMD2 0.0262 (21.4 s) +01:18:49 zs_cal E_N[pc] sq 1.4659 (LB 172.897 UB 289.512 Dif 343.840) l2 1.5026 (9.3 s) +01:20:20 zs_cal E_N[all] sq 1.8831 (LB 126.789 UB 204.767 Dif 273.629) l2 1.7656 (90.8 s) +01:20:20 zs_cal done in 209 s +01:20:35 lora5: lora__raw.npz sha 27d0673b7f09 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:20:59 lora5 [R1 raw] P/C k10 0.8843/0.6553 k5 0.7442/0.4945 k3 0.6113/0.3786 | AUC knn 0.940 rf 0.942 | 1-NN 0.849 | MMD2 0.0215 (23.0 s) +01:21:24 lora5 [R1 dm] P/C k10 0.8821/0.8139 k5 0.7603/0.6665 k3 0.6464/0.5392 | AUC knn 0.891 rf 0.911 | 1-NN 0.783 | MMD2 0.0119 (24.2 s) +01:21:48 lora5 [R2 raw] AUC knn 0.939 rf 0.940 | 1-NN 0.840 | MMD2 0.0211 (22.2 s) +01:22:08 lora5 [R2 dm] AUC knn 0.888 rf 0.910 | 1-NN 0.782 | MMD2 0.0117 (20.8 s) +01:22:21 lora5 E_N[pc] sq 1.4202 (LB 195.613 UB 288.174 Dif 327.067) l2 1.4751 (12.3 s) +01:24:00 lora5 E_N[all] sq 1.4909 (LB 133.810 UB 204.801 Dif 239.648) l2 1.4363 (98.5 s) +01:24:00 lora5 done in 220 s +01:24:02 zs_pseudo: zs__pseudo_all.npz sha ae3cc44a4534 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:24:27 zs_pseudo [R1 raw] P/C k10 0.9165/0.4853 k5 0.7862/0.3491 k3 0.6429/0.2621 | AUC knn 0.978 rf 0.984 | 1-NN 0.921 | MMD2 0.0295 (24.0 s) +01:24:52 zs_pseudo [R1 dm] P/C k10 0.9379/0.7481 k5 0.8400/0.5916 k3 0.7287/0.4665 | AUC knn 0.947 rf 0.965 | 1-NN 0.856 | MMD2 0.0197 (24.2 s) +01:25:16 zs_pseudo [R2 raw] AUC knn 0.980 rf 0.985 | 1-NN 0.929 | MMD2 0.0290 (22.5 s) +01:25:38 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.967 | 1-NN 0.860 | MMD2 0.0195 (21.9 s) +01:25:48 zs_pseudo E_N[pc] sq 1.1696 (LB 169.849 UB 290.574 Dif 311.050) l2 1.2400 (9.8 s) +01:27:11 zs_pseudo E_N[all] sq 1.5846 (LB 125.917 UB 204.901 Dif 251.077) l2 1.5363 (82.8 s) +01:27:11 zs_pseudo done in 191 s +01:27:21 scsemi5: scsemi5__raw.npz sha e0432092ee6c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:27:48 scsemi5 [R1 raw] P/C k10 0.6612/0.0875 k5 0.4710/0.0622 k3 0.3552/0.0453 | AUC knn 0.997 rf 1.000 | 1-NN 0.990 | MMD2 0.1340 (25.6 s) +01:28:12 scsemi5 [R1 dm] P/C k10 0.4913/0.1795 k5 0.3531/0.1169 k3 0.2574/0.0810 | AUC knn 0.995 rf 0.999 | 1-NN 0.980 | MMD2 0.0804 (24.0 s) +01:28:35 scsemi5 [R2 raw] AUC knn 0.998 rf 1.000 | 1-NN 0.991 | MMD2 0.1347 (21.9 s) +01:28:59 scsemi5 [R2 dm] AUC knn 0.996 rf 0.999 | 1-NN 0.981 | MMD2 0.0804 (23.4 s) +01:29:10 scsemi5 E_N[pc] sq 2.2501 (LB 128.087 UB 287.447 Dif 486.664) l2 2.0232 (10.8 s) +01:30:35 scsemi5 E_N[all] sq 3.6168 (LB 111.646 UB 202.168 Dif 439.048) l2 2.8447 (85.4 s) +01:30:35 scsemi5 done in 204 s +01:30:35 unit draw3 of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/fewshot_n5/draw3 in 1302.5 s (k=10 max |diff| vs scorer 0.00e+00) +01:30:36 ye2026_sepsis fewshot draw4 : 77 scored samples; fitting the scorer's view +01:30:40 bandwidth m (median pairwise distance of R1, PCA-50) = 27.8267 +01:30:42 observed cells: 544615 in 77 samples; R1/R2 rebuilt = reference.npz; R3 11550 cells (0 samples with fewer than n) +01:32:18 real_R2 [R1 raw] P/C k10 0.9807/0.9997 k5 0.9375/0.9863 k3 0.8731/0.9233 | AUC knn 0.515 rf 0.595 | 1-NN 0.506 | MMD2 0.0000 (33.8 s) +01:32:53 real_R2 [R1 dm] P/C k10 0.9795/0.9998 k5 0.9348/0.9862 k3 0.8677/0.9256 | AUC knn 0.509 rf 0.595 | 1-NN 0.504 | MMD2 0.0000 (35.1 s) +01:33:24 real_R3 [R2 raw] AUC knn 0.500 rf 0.493 | 1-NN 0.502 | MMD2 -0.0000 (28.3 s) +01:33:53 real_R3 [R2 dm] AUC knn 0.497 rf 0.493 | 1-NN 0.498 | MMD2 -0.0000 (28.8 s) +01:34:05 real_R2 E_N[pc] sq 0.2021 (LB 155.309 UB 309.342 Dif 186.434) l2 0.2176 (12.1 s) +01:35:49 real_R2 E_N[all] sq 0.0978 (LB 124.557 UB 213.754 Dif 133.280) l2 0.1044 (83.8 s) +01:35:51 zs_raw: zs__raw_all.npz sha bcb34be0a83c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:36:17 zs_raw [R1 raw] P/C k10 0.6255/0.0769 k5 0.4325/0.0478 k3 0.3143/0.0326 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1841 (24.1 s) +01:36:44 zs_raw [R1 dm] P/C k10 0.6037/0.0706 k5 0.4069/0.0452 k3 0.2922/0.0327 | AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1862 (27.3 s) +01:37:05 zs_raw [R2 raw] AUC knn 0.997 rf 0.999 | 1-NN 0.990 | MMD2 0.1865 (19.4 s) +01:37:27 zs_raw [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.989 | MMD2 0.1885 (21.5 s) +01:37:36 zs_raw E_N[pc] sq 13.4577 (LB 239.983 UB 269.109 Dif 631.958) l2 11.0922 (9.3 s) +01:38:58 zs_raw E_N[all] sq 5.3768 (LB 140.802 UB 197.184 Dif 443.957) l2 4.2363 (81.1 s) +01:38:58 zs_raw done in 189 s +01:39:13 zs_cal: zs__cal.npz sha 855d2a44b144 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:39:40 zs_cal [R1 raw] P/C k10 0.8944/0.4464 k5 0.7428/0.3086 k3 0.5958/0.2292 | AUC knn 0.982 rf 0.986 | 1-NN 0.935 | MMD2 0.0308 (26.1 s) +01:40:07 zs_cal [R1 dm] P/C k10 0.9178/0.6819 k5 0.7906/0.5244 k3 0.6570/0.4048 | AUC knn 0.957 rf 0.970 | 1-NN 0.874 | MMD2 0.0228 (27.0 s) +01:40:32 zs_cal [R2 raw] AUC knn 0.984 rf 0.987 | 1-NN 0.939 | MMD2 0.0302 (22.2 s) +01:40:53 zs_cal [R2 dm] AUC knn 0.960 rf 0.972 | 1-NN 0.883 | MMD2 0.0225 (21.7 s) +01:41:03 zs_cal E_N[pc] sq 1.3572 (LB 172.519 UB 296.787 Dif 341.181) l2 1.3986 (9.9 s) +01:42:23 zs_cal E_N[all] sq 1.9605 (LB 127.711 UB 201.412 Dif 272.205) l2 1.8310 (79.7 s) +01:42:23 zs_cal done in 205 s +01:42:40 lora5: lora__raw.npz sha 533fd5b2c48c (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:43:05 lora5 [R1 raw] P/C k10 0.8835/0.6870 k5 0.7468/0.5281 k3 0.6115/0.4098 | AUC knn 0.934 rf 0.939 | 1-NN 0.838 | MMD2 0.0127 (23.4 s) +01:43:29 lora5 [R1 dm] P/C k10 0.8947/0.8708 k5 0.7781/0.7250 k3 0.6668/0.5882 | AUC knn 0.873 rf 0.904 | 1-NN 0.767 | MMD2 0.0068 (24.2 s) +01:43:52 lora5 [R2 raw] AUC knn 0.933 rf 0.936 | 1-NN 0.832 | MMD2 0.0122 (21.0 s) +01:44:14 lora5 [R2 dm] AUC knn 0.868 rf 0.901 | 1-NN 0.764 | MMD2 0.0065 (22.0 s) +01:44:25 lora5 E_N[pc] sq 1.2051 (LB 192.090 UB 296.041 Dif 317.362) l2 1.2762 (10.7 s) +01:45:49 lora5 E_N[all] sq 1.5020 (LB 133.818 UB 201.525 Dif 235.512) l2 1.4565 (83.6 s) +01:45:49 lora5 done in 206 s +01:45:51 zs_pseudo: zs__pseudo_all.npz sha ae3cc44a4534 (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:46:18 zs_pseudo [R1 raw] P/C k10 0.9179/0.4945 k5 0.7839/0.3531 k3 0.6403/0.2646 | AUC knn 0.978 rf 0.983 | 1-NN 0.921 | MMD2 0.0295 (25.4 s) +01:46:42 zs_pseudo [R1 dm] P/C k10 0.9350/0.7447 k5 0.8261/0.5869 k3 0.7094/0.4636 | AUC knn 0.946 rf 0.965 | 1-NN 0.857 | MMD2 0.0198 (23.7 s) +01:47:06 zs_pseudo [R2 raw] AUC knn 0.981 rf 0.984 | 1-NN 0.930 | MMD2 0.0290 (22.2 s) +01:47:29 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.966 | 1-NN 0.864 | MMD2 0.0196 (23.3 s) +01:47:39 zs_pseudo E_N[pc] sq 1.1086 (LB 170.183 UB 297.828 Dif 311.685) l2 1.1854 (10.0 s) +01:49:05 zs_pseudo E_N[all] sq 1.6743 (LB 127.264 UB 201.592 Dif 251.714) l2 1.6174 (85.3 s) +01:49:05 zs_pseudo done in 196 s +01:49:14 scsemi5: scsemi5__raw.npz sha 15416b96afca (receipt verified), 115500 scored cells, 11550 in the P/C subsample (same rows as the scorer) +01:49:39 scsemi5 [R1 raw] P/C k10 0.6630/0.0819 k5 0.4801/0.0582 k3 0.3448/0.0410 | AUC knn 0.997 rf 1.000 | 1-NN 0.990 | MMD2 0.1492 (23.2 s) +01:50:04 scsemi5 [R1 dm] P/C k10 0.4236/0.1618 k5 0.2789/0.1003 k3 0.1826/0.0706 | AUC knn 0.996 rf 0.999 | 1-NN 0.983 | MMD2 0.0923 (25.6 s) +01:50:26 scsemi5 [R2 raw] AUC knn 0.998 rf 1.000 | 1-NN 0.991 | MMD2 0.1500 (20.4 s) +01:50:48 scsemi5 [R2 dm] AUC knn 0.996 rf 0.999 | 1-NN 0.982 | MMD2 0.0918 (22.0 s) +01:50:58 scsemi5 E_N[pc] sq 2.1687 (LB 123.016 UB 293.469 Dif 492.682) l2 1.9587 (9.3 s) +01:52:24 scsemi5 E_N[all] sq 3.7664 (LB 110.628 UB 198.720 Dif 442.413) l2 2.9448 (86.1 s) +01:52:24 scsemi5 done in 199 s +01:52:24 unit draw4 of ye2026_sepsis written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/ye2026_sepsis/fewshot_n5/draw4 in 1308.9 s (k=10 max |diff| vs scorer 0.00e+00) +JOB_EXIT 0 6653s --design fewshot --dataset ye2026_sepsis --draws 0,1,2,3,4 --threads 6 +JOB_START 2026-10-02T01:52:24+09:00 --design fewshot --dataset imperial_eskd --draws 0,1,2,3,4 --threads 6 +01:52:25 imperial_eskd fewshot draw0 : 142 scored samples; fitting the scorer's view +01:52:36 bandwidth m (median pairwise distance of R1, PCA-50) = 25.8753 +01:52:42 observed cells: 451540 in 142 samples; R1/R2 rebuilt = reference.npz; R3 20649 cells (6 samples with fewer than n) +01:54:49 real_R2 [R1 raw] P/C k10 0.9688/0.9998 k5 0.9142/0.9841 k3 0.8418/0.9170 | AUC knn 0.503 rf 0.560 | 1-NN 0.503 | MMD2 -0.0000 (78.4 s) +01:56:07 real_R2 [R1 dm] P/C k10 0.9698/0.9997 k5 0.9133/0.9840 k3 0.8391/0.9165 | AUC knn 0.502 rf 0.558 | 1-NN 0.504 | MMD2 -0.0000 (77.5 s) +01:57:19 real_R3 [R2 raw] AUC knn 0.496 rf 0.497 | 1-NN 0.498 | MMD2 -0.0000 (68.7 s) +01:58:21 real_R3 [R2 dm] AUC knn 0.499 rf 0.497 | 1-NN 0.498 | MMD2 -0.0000 (62.9 s) +01:58:38 real_R2 E_N[pc] sq 0.2234 (LB 188.218 UB 337.666 Dif 221.600) l2 0.2383 (16.5 s) +01:59:58 real_R2 E_N[all] sq 0.2483 (LB 154.038 UB 280.649 Dif 185.477) l2 0.2702 (59.6 s) +01:59:59 fetching generated/imperial_eskd/fewshot_n5/zs__raw_all.npz (6.49 GiB) from spark-0110 +02:01:07 zs_raw: zs__raw_all.npz sha 6d55581d453c (receipt verified), 213000 scored cells, 21250 in the P/C subsample (same rows as the scorer) +02:02:07 zs_raw [R1 raw] P/C k10 0.5056/0.1078 k5 0.3157/0.0686 k3 0.2213/0.0475 | AUC knn 0.995 rf 0.998 | 1-NN 0.981 | MMD2 0.2477 (57.3 s) +02:03:05 zs_raw [R1 dm] P/C k10 0.5768/0.1412 k5 0.3745/0.0907 k3 0.2475/0.0643 | AUC knn 0.995 rf 0.997 | 1-NN 0.974 | MMD2 0.2294 (57.5 s) +02:03:59 zs_raw [R2 raw] AUC knn 0.995 rf 0.998 | 1-NN 0.982 | MMD2 0.2497 (51.4 s) +02:04:55 zs_raw [R2 dm] AUC knn 0.994 rf 0.997 | 1-NN 0.976 | MMD2 0.2309 (56.6 s) +02:05:12 zs_raw E_N[pc] sq 6.6095 (LB 237.626 UB 298.773 Dif 641.785) l2 5.0357 (16.1 s) +02:06:38 zs_raw E_N[all] sq 4.4811 (LB 174.654 UB 245.642 Dif 492.759) l2 3.4887 (84.5 s) +02:06:38 zs_raw done in 399 s +02:06:38 fetching generated/imperial_eskd/fewshot_n5/draw0/zs__cal.npz (5.31 GiB) from spark-0110 +02:07:31 zs_cal: zs__cal.npz sha fd62239004a2 (receipt verified), 213000 scored cells, 21250 in the P/C subsample (same rows as the scorer) +02:08:33 zs_cal [R1 raw] P/C k10 0.8497/0.6424 k5 0.7299/0.4919 k3 0.6128/0.3779 | AUC knn 0.956 rf 0.966 | 1-NN 0.870 | MMD2 0.0209 (59.6 s) +02:09:32 zs_cal [R1 dm] P/C k10 0.8755/0.6953 k5 0.7694/0.5416 k3 0.6630/0.4248 | AUC knn 0.948 rf 0.965 | 1-NN 0.858 | MMD2 0.0233 (58.4 s) +02:10:25 zs_cal [R2 raw] AUC knn 0.958 rf 0.967 | 1-NN 0.875 | MMD2 0.0206 (50.7 s) +02:11:16 zs_cal [R2 dm] AUC knn 0.948 rf 0.965 | 1-NN 0.861 | MMD2 0.0232 (51.0 s) +02:11:34 zs_cal E_N[pc] sq 1.1316 (LB 202.278 UB 325.255 Dif 341.433) l2 1.1268 (17.8 s) +02:12:59 zs_cal E_N[all] sq 1.2279 (LB 160.798 UB 255.342 Dif 276.888) l2 1.2052 (83.5 s) +02:12:59 zs_cal done in 381 s +02:12:59 fetching generated/imperial_eskd/fewshot_n5/draw0/lora__raw.npz (5.24 GiB) from spark-0110 +02:13:52 lora5: lora__raw.npz sha aa39dce41968 (receipt verified), 213000 scored cells, 21250 in the P/C subsample (same rows as the scorer) +02:14:48 lora5 [R1 raw] P/C k10 0.8608/0.7570 k5 0.7354/0.6066 k3 0.6170/0.4821 | AUC knn 0.911 rf 0.920 | 1-NN 0.804 | MMD2 0.0140 (54.0 s) +02:15:48 lora5 [R1 dm] P/C k10 0.8882/0.8848 k5 0.7746/0.7409 k3 0.6631/0.6040 | AUC knn 0.882 rf 0.903 | 1-NN 0.760 | MMD2 0.0103 (60.2 s) +02:16:42 lora5 [R2 raw] AUC knn 0.917 rf 0.917 | 1-NN 0.803 | MMD2 0.0140 (50.3 s) +02:17:33 lora5 [R2 dm] AUC knn 0.883 rf 0.901 | 1-NN 0.762 | MMD2 0.0103 (51.3 s) +02:17:49 lora5 E_N[pc] sq 1.2614 (LB 223.836 UB 323.581 Dif 349.658) l2 1.2506 (16.4 s) +02:19:12 lora5 E_N[all] sq 1.2995 (LB 172.676 UB 255.090 Dif 279.770) l2 1.2706 (81.6 s) +02:19:12 lora5 done in 373 s +02:19:13 fetching generated/imperial_eskd/fewshot_n5/zs__pseudo_all.npz (5.87 GiB) from spark-0110 +02:20:12 zs_pseudo: zs__pseudo_all.npz sha 1a7f96c4e8e0 (receipt verified), 213000 scored cells, 21250 in the P/C subsample (same rows as the scorer) +02:21:14 zs_pseudo [R1 raw] P/C k10 0.8479/0.7113 k5 0.7129/0.5466 k3 0.5901/0.4248 | AUC knn 0.955 rf 0.965 | 1-NN 0.860 | MMD2 0.0173 (59.5 s) +02:22:13 zs_pseudo [R1 dm] P/C k10 0.8891/0.7415 k5 0.7760/0.5817 k3 0.6692/0.4613 | AUC knn 0.945 rf 0.966 | 1-NN 0.845 | MMD2 0.0186 (59.2 s) +02:23:06 zs_pseudo [R2 raw] AUC knn 0.958 rf 0.964 | 1-NN 0.869 | MMD2 0.0171 (49.4 s) +02:23:59 zs_pseudo [R2 dm] AUC knn 0.947 rf 0.966 | 1-NN 0.852 | MMD2 0.0186 (53.5 s) +02:24:15 zs_pseudo E_N[pc] sq 0.9940 (LB 197.027 UB 325.263 Dif 324.498) l2 0.9971 (15.7 s) +02:25:37 zs_pseudo E_N[all] sq 1.1175 (LB 158.543 UB 255.452 Dif 266.841) l2 1.1049 (80.5 s) +02:25:37 zs_pseudo done in 385 s +02:25:37 fetching generated/imperial_eskd/fewshot_n5/draw0/scsemi5__raw.npz (0.14 GiB) from spark-0110 +02:25:57 scsemi5: scsemi5__raw.npz sha fe0c72e4fc0f (receipt verified), 213000 scored cells, 21250 in the P/C subsample (same rows as the scorer) +02:26:55 scsemi5 [R1 raw] P/C k10 0.3751/0.0734 k5 0.2247/0.0468 k3 0.1507/0.0322 | AUC knn 0.999 rf 1.000 | 1-NN 0.992 | MMD2 0.1272 (56.4 s) +02:28:00 scsemi5 [R1 dm] P/C k10 0.4896/0.1795 k5 0.3278/0.1109 k3 0.2312/0.0753 | AUC knn 0.996 rf 0.999 | 1-NN 0.984 | MMD2 0.1005 (64.5 s) +02:28:54 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.994 | MMD2 0.1271 (51.5 s) +02:29:51 scsemi5 [R2 dm] AUC knn 0.997 rf 0.999 | 1-NN 0.984 | MMD2 0.1000 (56.8 s) +02:30:12 scsemi5 E_N[pc] sq 1.6917 (LB 141.451 UB 320.823 Dif 444.903) l2 1.5388 (20.9 s) +02:31:34 scsemi5 E_N[all] sq 2.0702 (LB 121.281 UB 251.776 Dif 391.431) l2 1.7835 (82.3 s) +02:31:34 scsemi5 done in 358 s +02:31:34 unit draw0 of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/fewshot_n5/draw0 in 2349.5 s (k=10 max |diff| vs scorer 0.00e+00) +02:31:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw0/zs__cal.npz +02:31:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw0/lora__raw.npz +02:31:35 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw0/scsemi5__raw.npz +02:31:35 imperial_eskd fewshot draw1 : 143 scored samples; fitting the scorer's view +02:31:45 bandwidth m (median pairwise distance of R1, PCA-50) = 26.0236 +02:31:48 observed cells: 477707 in 143 samples; R1/R2 rebuilt = reference.npz; R3 20906 cells (5 samples with fewer than n) +02:33:57 real_R2 [R1 raw] P/C k10 0.9685/0.9998 k5 0.9147/0.9850 k3 0.8428/0.9195 | AUC knn 0.501 rf 0.559 | 1-NN 0.502 | MMD2 -0.0000 (78.6 s) +02:35:15 real_R2 [R1 dm] P/C k10 0.9689/0.9996 k5 0.9140/0.9853 k3 0.8421/0.9197 | AUC knn 0.501 rf 0.563 | 1-NN 0.503 | MMD2 -0.0000 (77.6 s) +02:36:25 real_R3 [R2 raw] AUC knn 0.503 rf 0.508 | 1-NN 0.498 | MMD2 -0.0000 (68.0 s) +02:37:30 real_R3 [R2 dm] AUC knn 0.500 rf 0.503 | 1-NN 0.499 | MMD2 -0.0000 (65.1 s) +02:37:49 real_R2 E_N[pc] sq 0.2362 (LB 188.767 UB 333.360 Dif 222.914) l2 0.2537 (18.0 s) +02:39:13 real_R2 E_N[all] sq 0.2715 (LB 154.380 UB 270.598 Dif 185.937) l2 0.2929 (63.5 s) +02:39:22 zs_raw: zs__raw_all.npz sha 6d55581d453c (receipt verified), 214500 scored cells, 21395 in the P/C subsample (same rows as the scorer) +02:40:26 zs_raw [R1 raw] P/C k10 0.4785/0.1158 k5 0.3002/0.0725 k3 0.2032/0.0496 | AUC knn 0.995 rf 0.997 | 1-NN 0.980 | MMD2 0.2390 (61.2 s) +02:41:26 zs_raw [R1 dm] P/C k10 0.5362/0.1531 k5 0.3283/0.0989 k3 0.2250/0.0705 | AUC knn 0.994 rf 0.996 | 1-NN 0.972 | MMD2 0.2201 (60.0 s) +02:42:21 zs_raw [R2 raw] AUC knn 0.995 rf 0.998 | 1-NN 0.980 | MMD2 0.2406 (52.4 s) +02:43:12 zs_raw [R2 dm] AUC knn 0.994 rf 0.996 | 1-NN 0.973 | MMD2 0.2211 (51.4 s) +02:43:32 zs_raw E_N[pc] sq 6.7972 (LB 236.549 UB 295.417 Dif 636.682) l2 5.2870 (19.3 s) +02:45:06 zs_raw E_N[all] sq 4.1221 (LB 174.081 UB 249.663 Dif 485.637) l2 3.2708 (92.9 s) +02:45:06 zs_raw done in 353 s +02:45:07 fetching generated/imperial_eskd/fewshot_n5/draw1/zs__cal.npz (5.31 GiB) from spark-0110 +02:46:00 zs_cal: zs__cal.npz sha ef4e504f218a (receipt verified), 214500 scored cells, 21395 in the P/C subsample (same rows as the scorer) +02:47:00 zs_cal [R1 raw] P/C k10 0.8434/0.6338 k5 0.7133/0.4866 k3 0.5853/0.3736 | AUC knn 0.959 rf 0.969 | 1-NN 0.874 | MMD2 0.0218 (57.4 s) +02:48:01 zs_cal [R1 dm] P/C k10 0.8659/0.6824 k5 0.7503/0.5274 k3 0.6412/0.4127 | AUC knn 0.951 rf 0.967 | 1-NN 0.858 | MMD2 0.0225 (61.3 s) +02:48:54 zs_cal [R2 raw] AUC knn 0.962 rf 0.968 | 1-NN 0.876 | MMD2 0.0216 (49.6 s) +02:49:43 zs_cal [R2 dm] AUC knn 0.954 rf 0.968 | 1-NN 0.866 | MMD2 0.0226 (49.7 s) +02:50:03 zs_cal E_N[pc] sq 1.1674 (LB 201.683 UB 320.645 Dif 340.554) l2 1.1725 (19.3 s) +02:51:32 zs_cal E_N[all] sq 1.1771 (LB 160.477 UB 258.802 Dif 276.212) l2 1.1678 (88.4 s) +02:51:32 zs_cal done in 386 s +02:51:33 fetching generated/imperial_eskd/fewshot_n5/draw1/lora__raw.npz (5.25 GiB) from spark-0110 +02:52:26 lora5: lora__raw.npz sha 9664e2cfd990 (receipt verified), 214500 scored cells, 21395 in the P/C subsample (same rows as the scorer) +02:53:24 lora5 [R1 raw] P/C k10 0.8450/0.7829 k5 0.7144/0.6230 k3 0.5990/0.4926 | AUC knn 0.907 rf 0.910 | 1-NN 0.790 | MMD2 0.0155 (55.5 s) +02:54:21 lora5 [R1 dm] P/C k10 0.8829/0.8706 k5 0.7713/0.7289 k3 0.6595/0.5958 | AUC knn 0.875 rf 0.903 | 1-NN 0.757 | MMD2 0.0105 (56.6 s) +02:55:17 lora5 [R2 raw] AUC knn 0.910 rf 0.908 | 1-NN 0.791 | MMD2 0.0153 (53.8 s) +02:56:13 lora5 [R2 dm] AUC knn 0.876 rf 0.902 | 1-NN 0.761 | MMD2 0.0106 (56.2 s) +02:56:36 lora5 E_N[pc] sq 1.1317 (LB 216.753 UB 321.146 Dif 334.896) l2 1.1602 (22.3 s) +02:58:04 lora5 E_N[all] sq 1.1331 (LB 169.375 UB 259.372 Dif 271.348) l2 1.1341 (87.0 s) +02:58:04 lora5 done in 392 s +02:58:11 zs_pseudo: zs__pseudo_all.npz sha 1a7f96c4e8e0 (receipt verified), 214500 scored cells, 21395 in the P/C subsample (same rows as the scorer) +02:59:10 zs_pseudo [R1 raw] P/C k10 0.8395/0.7062 k5 0.7071/0.5418 k3 0.5837/0.4230 | AUC knn 0.956 rf 0.966 | 1-NN 0.863 | MMD2 0.0174 (57.1 s) +03:00:13 zs_pseudo [R1 dm] P/C k10 0.8817/0.7344 k5 0.7698/0.5771 k3 0.6568/0.4544 | AUC knn 0.948 rf 0.968 | 1-NN 0.852 | MMD2 0.0189 (62.6 s) +03:01:05 zs_pseudo [R2 raw] AUC knn 0.960 rf 0.966 | 1-NN 0.870 | MMD2 0.0172 (48.8 s) +03:01:55 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.968 | 1-NN 0.854 | MMD2 0.0190 (50.7 s) +03:02:12 zs_pseudo E_N[pc] sq 1.0375 (LB 197.510 UB 320.957 Dif 325.588) l2 1.0481 (16.6 s) +03:03:47 zs_pseudo E_N[all] sq 1.0794 (LB 158.750 UB 258.758 Dif 266.699) l2 1.0775 (94.4 s) +03:03:47 zs_pseudo done in 344 s +03:03:48 fetching generated/imperial_eskd/fewshot_n5/draw1/scsemi5__raw.npz (0.14 GiB) from spark-0110 +03:04:08 scsemi5: scsemi5__raw.npz sha 184060f4ddf0 (receipt verified), 214500 scored cells, 21395 in the P/C subsample (same rows as the scorer) +03:05:08 scsemi5 [R1 raw] P/C k10 0.3175/0.0635 k5 0.1713/0.0400 k3 0.1018/0.0283 | AUC knn 0.999 rf 1.000 | 1-NN 0.994 | MMD2 0.1380 (58.2 s) +03:06:11 scsemi5 [R1 dm] P/C k10 0.4437/0.1411 k5 0.3002/0.0880 k3 0.2135/0.0600 | AUC knn 0.997 rf 1.000 | 1-NN 0.987 | MMD2 0.1186 (63.1 s) +03:07:06 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.1377 (52.8 s) +03:08:04 scsemi5 [R2 dm] AUC knn 0.997 rf 1.000 | 1-NN 0.988 | MMD2 0.1188 (57.8 s) +03:08:24 scsemi5 E_N[pc] sq 1.6150 (LB 141.573 UB 321.051 Dif 431.432) l2 1.4971 (19.5 s) +03:09:52 scsemi5 E_N[all] sq 1.9233 (LB 121.126 UB 257.210 Dif 382.852) l2 1.6842 (87.4 s) +03:09:52 scsemi5 done in 364 s +03:09:52 unit draw1 of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/fewshot_n5/draw1 in 2296.8 s (k=10 max |diff| vs scorer 0.00e+00) +03:09:52 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw1/zs__cal.npz +03:09:52 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw1/lora__raw.npz +03:09:52 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw1/scsemi5__raw.npz +03:09:52 imperial_eskd fewshot draw2 : 142 scored samples; fitting the scorer's view +03:10:00 bandwidth m (median pairwise distance of R1, PCA-50) = 25.7357 +03:10:02 observed cells: 480410 in 142 samples; R1/R2 rebuilt = reference.npz; R3 20606 cells (6 samples with fewer than n) +03:11:58 real_R2 [R1 raw] P/C k10 0.9694/0.9998 k5 0.9137/0.9851 k3 0.8395/0.9205 | AUC knn 0.503 rf 0.559 | 1-NN 0.504 | MMD2 -0.0000 (74.9 s) +03:13:18 real_R2 [R1 dm] P/C k10 0.9690/0.9997 k5 0.9139/0.9838 k3 0.8405/0.9190 | AUC knn 0.502 rf 0.560 | 1-NN 0.502 | MMD2 -0.0000 (79.9 s) +03:14:24 real_R3 [R2 raw] AUC knn 0.498 rf 0.502 | 1-NN 0.501 | MMD2 -0.0000 (63.0 s) +03:15:26 real_R3 [R2 dm] AUC knn 0.495 rf 0.498 | 1-NN 0.501 | MMD2 -0.0000 (62.0 s) +03:15:41 real_R2 E_N[pc] sq 0.2386 (LB 186.033 UB 326.849 Dif 219.625) l2 0.2557 (15.1 s) +03:17:14 real_R2 E_N[all] sq 0.2682 (LB 152.000 UB 267.622 Dif 183.004) l2 0.2880 (72.7 s) +03:17:25 zs_raw: zs__raw_all.npz sha 6d55581d453c (receipt verified), 213000 scored cells, 21232 in the P/C subsample (same rows as the scorer) +03:18:24 zs_raw [R1 raw] P/C k10 0.4893/0.1115 k5 0.3028/0.0700 k3 0.2142/0.0488 | AUC knn 0.996 rf 0.997 | 1-NN 0.980 | MMD2 0.2402 (56.1 s) +03:19:21 zs_raw [R1 dm] P/C k10 0.5244/0.1493 k5 0.3255/0.0967 k3 0.2224/0.0677 | AUC knn 0.994 rf 0.996 | 1-NN 0.973 | MMD2 0.2220 (57.8 s) +03:20:17 zs_raw [R2 raw] AUC knn 0.995 rf 0.998 | 1-NN 0.980 | MMD2 0.2424 (52.5 s) +03:21:14 zs_raw [R2 dm] AUC knn 0.995 rf 0.997 | 1-NN 0.974 | MMD2 0.2237 (57.2 s) +03:21:34 zs_raw E_N[pc] sq 7.5197 (LB 235.697 UB 289.142 Dif 637.587) l2 5.7755 (19.2 s) +03:22:58 zs_raw E_N[all] sq 4.3781 (LB 172.423 UB 244.059 Dif 486.058) l2 3.4398 (83.5 s) +03:22:58 zs_raw done in 345 s +03:22:59 fetching generated/imperial_eskd/fewshot_n5/draw2/zs__cal.npz (5.30 GiB) from spark-0110 +03:23:53 zs_cal: zs__cal.npz sha afec06917876 (receipt verified), 213000 scored cells, 21232 in the P/C subsample (same rows as the scorer) +03:24:55 zs_cal [R1 raw] P/C k10 0.8570/0.6349 k5 0.7357/0.4874 k3 0.6184/0.3798 | AUC knn 0.954 rf 0.965 | 1-NN 0.867 | MMD2 0.0230 (59.8 s) +03:25:53 zs_cal [R1 dm] P/C k10 0.8774/0.6786 k5 0.7691/0.5302 k3 0.6668/0.4158 | AUC knn 0.946 rf 0.964 | 1-NN 0.857 | MMD2 0.0255 (57.4 s) +03:26:43 zs_cal [R2 raw] AUC knn 0.958 rf 0.965 | 1-NN 0.873 | MMD2 0.0227 (48.1 s) +03:27:34 zs_cal [R2 dm] AUC knn 0.950 rf 0.965 | 1-NN 0.864 | MMD2 0.0254 (50.4 s) +03:27:50 zs_cal E_N[pc] sq 1.2089 (LB 202.175 UB 314.398 Dif 337.836) l2 1.2208 (15.9 s) +03:29:48 zs_cal E_N[all] sq 1.2300 (LB 160.383 UB 253.233 Dif 274.590) l2 1.2175 (117.7 s) +03:29:48 zs_cal done in 410 s +03:29:49 fetching generated/imperial_eskd/fewshot_n5/draw2/lora__raw.npz (5.16 GiB) from spark-0110 +03:30:44 lora5: lora__raw.npz sha 207a9e5ba0cb (receipt verified), 213000 scored cells, 21232 in the P/C subsample (same rows as the scorer) +03:31:44 lora5 [R1 raw] P/C k10 0.8454/0.6650 k5 0.7137/0.5251 k3 0.5998/0.4208 | AUC knn 0.921 rf 0.925 | 1-NN 0.819 | MMD2 0.0189 (58.3 s) +03:32:44 lora5 [R1 dm] P/C k10 0.8740/0.8675 k5 0.7603/0.7269 k3 0.6566/0.5879 | AUC knn 0.868 rf 0.895 | 1-NN 0.753 | MMD2 0.0081 (59.4 s) +03:33:37 lora5 [R2 raw] AUC knn 0.926 rf 0.922 | 1-NN 0.819 | MMD2 0.0188 (50.5 s) +03:34:29 lora5 [R2 dm] AUC knn 0.873 rf 0.895 | 1-NN 0.757 | MMD2 0.0083 (51.9 s) +03:34:50 lora5 E_N[pc] sq 1.4185 (LB 222.335 UB 314.035 Dif 352.412) l2 1.4322 (21.4 s) +03:36:10 lora5 E_N[all] sq 1.4039 (LB 171.752 UB 253.401 Dif 286.382) l2 1.3724 (79.2 s) +03:36:10 lora5 done in 382 s +03:36:16 zs_pseudo: zs__pseudo_all.npz sha 1a7f96c4e8e0 (receipt verified), 213000 scored cells, 21232 in the P/C subsample (same rows as the scorer) +03:37:14 zs_pseudo [R1 raw] P/C k10 0.8389/0.6944 k5 0.7039/0.5349 k3 0.5820/0.4116 | AUC knn 0.956 rf 0.967 | 1-NN 0.864 | MMD2 0.0177 (54.7 s) +03:38:14 zs_pseudo [R1 dm] P/C k10 0.8811/0.7309 k5 0.7717/0.5734 k3 0.6625/0.4535 | AUC knn 0.946 rf 0.967 | 1-NN 0.849 | MMD2 0.0190 (60.0 s) +03:39:07 zs_pseudo [R2 raw] AUC knn 0.960 rf 0.967 | 1-NN 0.873 | MMD2 0.0175 (50.7 s) +03:39:57 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.968 | 1-NN 0.853 | MMD2 0.0189 (49.9 s) +03:40:15 zs_pseudo E_N[pc] sq 1.0748 (LB 196.320 UB 314.807 Dif 323.674) l2 1.0814 (17.4 s) +03:41:47 zs_pseudo E_N[all] sq 1.1231 (LB 157.551 UB 252.992 Dif 264.738) l2 1.1154 (91.2 s) +03:41:47 zs_pseudo done in 337 s +03:41:47 fetching generated/imperial_eskd/fewshot_n5/draw2/scsemi5__raw.npz (0.16 GiB) from spark-0110 +03:42:07 scsemi5: scsemi5__raw.npz sha 56d727776441 (receipt verified), 213000 scored cells, 21232 in the P/C subsample (same rows as the scorer) +03:43:05 scsemi5 [R1 raw] P/C k10 0.3373/0.0597 k5 0.1971/0.0365 k3 0.1322/0.0246 | AUC knn 0.999 rf 1.000 | 1-NN 0.994 | MMD2 0.1317 (55.3 s) +03:44:05 scsemi5 [R1 dm] P/C k10 0.4142/0.1705 k5 0.2723/0.1045 k3 0.1862/0.0700 | AUC knn 0.998 rf 0.999 | 1-NN 0.985 | MMD2 0.1095 (60.3 s) +03:45:02 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.1315 (54.5 s) +03:45:58 scsemi5 [R2 dm] AUC knn 0.998 rf 0.999 | 1-NN 0.985 | MMD2 0.1093 (55.7 s) +03:46:14 scsemi5 E_N[pc] sq 1.7913 (LB 152.976 UB 312.531 Dif 438.782) l2 1.6652 (16.4 s) +03:47:37 scsemi5 E_N[all] sq 2.1236 (LB 128.422 UB 250.788 Dif 388.280) l2 1.8685 (82.5 s) +03:47:37 scsemi5 done in 350 s +03:47:37 unit draw2 of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/fewshot_n5/draw2 in 2265.1 s (k=10 max |diff| vs scorer 0.00e+00) +03:47:37 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw2/zs__cal.npz +03:47:38 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw2/lora__raw.npz +03:47:38 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw2/scsemi5__raw.npz +03:47:38 imperial_eskd fewshot draw3 : 145 scored samples; fitting the scorer's view +03:47:47 bandwidth m (median pairwise distance of R1, PCA-50) = 25.8298 +03:47:50 observed cells: 479793 in 145 samples; R1/R2 rebuilt = reference.npz; R3 20950 cells (7 samples with fewer than n) +03:50:08 real_R2 [R1 raw] P/C k10 0.9691/0.9998 k5 0.9162/0.9851 k3 0.8416/0.9188 | AUC knn 0.499 rf 0.562 | 1-NN 0.505 | MMD2 -0.0000 (78.8 s) +03:51:26 real_R2 [R1 dm] P/C k10 0.9693/0.9997 k5 0.9140/0.9851 k3 0.8424/0.9220 | AUC knn 0.500 rf 0.559 | 1-NN 0.505 | MMD2 -0.0000 (77.7 s) +03:52:39 real_R3 [R2 raw] AUC knn 0.495 rf 0.501 | 1-NN 0.499 | MMD2 -0.0000 (70.7 s) +03:53:46 real_R3 [R2 dm] AUC knn 0.499 rf 0.502 | 1-NN 0.497 | MMD2 -0.0000 (66.7 s) +03:54:03 real_R2 E_N[pc] sq 0.2345 (LB 189.001 UB 336.466 Dif 223.578) l2 0.2504 (16.9 s) +03:55:36 real_R2 E_N[all] sq 0.2598 (LB 154.331 UB 280.967 Dif 187.236) l2 0.2807 (69.1 s) +03:55:45 zs_raw: zs__raw_all.npz sha 6d55581d453c (receipt verified), 217500 scored cells, 21682 in the P/C subsample (same rows as the scorer) +03:56:49 zs_raw [R1 raw] P/C k10 0.5133/0.1170 k5 0.3349/0.0727 k3 0.2434/0.0508 | AUC knn 0.995 rf 0.997 | 1-NN 0.979 | MMD2 0.2381 (61.4 s) +03:57:51 zs_raw [R1 dm] P/C k10 0.5792/0.1565 k5 0.3884/0.0989 k3 0.2630/0.0707 | AUC knn 0.994 rf 0.996 | 1-NN 0.972 | MMD2 0.2191 (61.3 s) +03:58:49 zs_raw [R2 raw] AUC knn 0.995 rf 0.997 | 1-NN 0.981 | MMD2 0.2391 (55.2 s) +03:59:44 zs_raw [R2 dm] AUC knn 0.994 rf 0.996 | 1-NN 0.974 | MMD2 0.2197 (54.5 s) +04:00:02 zs_raw E_N[pc] sq 6.4142 (LB 236.342 UB 298.167 Dif 632.906) l2 4.9440 (18.7 s) +04:01:35 zs_raw E_N[all] sq 4.2238 (LB 173.698 UB 247.535 Dif 485.570) l2 3.3112 (91.0 s) +04:01:35 zs_raw done in 358 s +04:01:36 fetching generated/imperial_eskd/fewshot_n5/draw3/zs__cal.npz (5.36 GiB) from spark-0110 +04:02:28 zs_cal: zs__cal.npz sha 84eb43ca625f (receipt verified), 217500 scored cells, 21682 in the P/C subsample (same rows as the scorer) +04:03:29 zs_cal [R1 raw] P/C k10 0.8423/0.6254 k5 0.7114/0.4758 k3 0.5889/0.3652 | AUC knn 0.961 rf 0.970 | 1-NN 0.877 | MMD2 0.0250 (58.6 s) +04:04:29 zs_cal [R1 dm] P/C k10 0.8670/0.6775 k5 0.7559/0.5161 k3 0.6452/0.4045 | AUC knn 0.952 rf 0.970 | 1-NN 0.866 | MMD2 0.0260 (59.8 s) +04:05:25 zs_cal [R2 raw] AUC knn 0.965 rf 0.970 | 1-NN 0.885 | MMD2 0.0248 (53.0 s) +04:06:16 zs_cal [R2 dm] AUC knn 0.954 rf 0.970 | 1-NN 0.870 | MMD2 0.0263 (51.3 s) +04:06:36 zs_cal E_N[pc] sq 1.1520 (LB 203.580 UB 323.966 Dif 342.265) l2 1.1539 (19.6 s) +04:08:10 zs_cal E_N[all] sq 1.2339 (LB 161.996 UB 256.757 Dif 278.926) l2 1.2108 (92.4 s) +04:08:10 zs_cal done in 395 s +04:08:10 fetching generated/imperial_eskd/fewshot_n5/draw3/lora__raw.npz (5.39 GiB) from spark-0110 +04:09:06 lora5: lora__raw.npz sha b4a12bcba3b3 (receipt verified), 217500 scored cells, 21682 in the P/C subsample (same rows as the scorer) +04:10:07 lora5 [R1 raw] P/C k10 0.8802/0.8427 k5 0.7701/0.6941 k3 0.6570/0.5577 | AUC knn 0.901 rf 0.903 | 1-NN 0.783 | MMD2 0.0084 (58.6 s) +04:11:04 lora5 [R1 dm] P/C k10 0.9078/0.9036 k5 0.8067/0.7724 k3 0.7063/0.6317 | AUC knn 0.876 rf 0.900 | 1-NN 0.755 | MMD2 0.0079 (57.4 s) +04:11:59 lora5 [R2 raw] AUC knn 0.906 rf 0.901 | 1-NN 0.787 | MMD2 0.0082 (52.0 s) +04:12:50 lora5 [R2 dm] AUC knn 0.878 rf 0.900 | 1-NN 0.758 | MMD2 0.0079 (51.1 s) +04:13:09 lora5 E_N[pc] sq 1.0361 (LB 212.570 UB 323.919 Dif 327.934) l2 1.0505 (18.6 s) +04:14:43 lora5 E_N[all] sq 1.1083 (LB 167.685 UB 256.947 Dif 266.618) l2 1.0975 (93.2 s) +04:14:43 lora5 done in 394 s +04:14:50 zs_pseudo: zs__pseudo_all.npz sha 1a7f96c4e8e0 (receipt verified), 217500 scored cells, 21682 in the P/C subsample (same rows as the scorer) +04:15:44 zs_pseudo [R1 raw] P/C k10 0.8397/0.7055 k5 0.7041/0.5457 k3 0.5833/0.4218 | AUC knn 0.956 rf 0.967 | 1-NN 0.862 | MMD2 0.0178 (52.5 s) +04:16:45 zs_pseudo [R1 dm] P/C k10 0.8790/0.7334 k5 0.7660/0.5750 k3 0.6633/0.4517 | AUC knn 0.947 rf 0.968 | 1-NN 0.852 | MMD2 0.0194 (60.4 s) +04:17:38 zs_pseudo [R2 raw] AUC knn 0.960 rf 0.967 | 1-NN 0.870 | MMD2 0.0176 (50.8 s) +04:18:31 zs_pseudo [R2 dm] AUC knn 0.950 rf 0.968 | 1-NN 0.856 | MMD2 0.0193 (52.1 s) +04:18:48 zs_pseudo E_N[pc] sq 1.0136 (LB 197.363 UB 324.106 Dif 325.823) l2 1.0172 (17.2 s) +04:20:20 zs_pseudo E_N[all] sq 1.1118 (LB 158.690 UB 256.510 Dif 267.443) l2 1.0982 (91.2 s) +04:20:20 zs_pseudo done in 337 s +04:20:21 fetching generated/imperial_eskd/fewshot_n5/draw3/scsemi5__raw.npz (0.15 GiB) from spark-0110 +04:20:42 scsemi5: scsemi5__raw.npz sha dada388bc27a (receipt verified), 217500 scored cells, 21682 in the P/C subsample (same rows as the scorer) +04:21:43 scsemi5 [R1 raw] P/C k10 0.2963/0.0439 k5 0.1485/0.0268 k3 0.0852/0.0182 | AUC knn 0.999 rf 1.000 | 1-NN 0.997 | MMD2 0.1453 (58.9 s) +04:22:41 scsemi5 [R1 dm] P/C k10 0.4287/0.1403 k5 0.3032/0.0858 k3 0.2113/0.0575 | AUC knn 0.998 rf 1.000 | 1-NN 0.989 | MMD2 0.1275 (57.5 s) +04:23:36 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.997 | MMD2 0.1453 (53.1 s) +04:24:31 scsemi5 [R2 dm] AUC knn 0.997 rf 1.000 | 1-NN 0.988 | MMD2 0.1271 (54.6 s) +04:24:48 scsemi5 E_N[pc] sq 1.6110 (LB 138.518 UB 326.157 Dif 440.810) l2 1.4700 (17.2 s) +04:26:07 scsemi5 E_N[all] sq 2.0510 (LB 120.256 UB 254.958 Dif 396.529) l2 1.7454 (78.4 s) +04:26:07 scsemi5 done in 347 s +04:26:07 unit draw3 of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/fewshot_n5/draw3 in 2309.4 s (k=10 max |diff| vs scorer 0.00e+00) +04:26:07 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw3/zs__cal.npz +04:26:08 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw3/lora__raw.npz +04:26:08 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw3/scsemi5__raw.npz +04:26:08 imperial_eskd fewshot draw4 : 143 scored samples; fitting the scorer's view +04:26:17 bandwidth m (median pairwise distance of R1, PCA-50) = 26.3136 +04:26:21 observed cells: 477903 in 143 samples; R1/R2 rebuilt = reference.npz; R3 20705 cells (6 samples with fewer than n) +04:28:30 real_R2 [R1 raw] P/C k10 0.9696/0.9998 k5 0.9146/0.9861 k3 0.8436/0.9209 | AUC knn 0.502 rf 0.560 | 1-NN 0.503 | MMD2 -0.0000 (74.4 s) +04:29:44 real_R2 [R1 dm] P/C k10 0.9684/0.9997 k5 0.9149/0.9853 k3 0.8430/0.9181 | AUC knn 0.503 rf 0.559 | 1-NN 0.502 | MMD2 -0.0000 (74.1 s) +04:30:52 real_R3 [R2 raw] AUC knn 0.497 rf 0.498 | 1-NN 0.497 | MMD2 -0.0000 (65.7 s) +04:31:57 real_R3 [R2 dm] AUC knn 0.496 rf 0.493 | 1-NN 0.499 | MMD2 -0.0000 (64.7 s) +04:32:12 real_R2 E_N[pc] sq 0.2321 (LB 186.070 UB 331.148 Dif 219.748) l2 0.2512 (15.0 s) +04:33:49 real_R2 E_N[all] sq 0.2512 (LB 152.180 UB 276.267 Dif 183.348) l2 0.2733 (71.7 s) +04:33:57 zs_raw: zs__raw_all.npz sha 6d55581d453c (receipt verified), 214500 scored cells, 21382 in the P/C subsample (same rows as the scorer) +04:34:55 zs_raw [R1 raw] P/C k10 0.5149/0.1162 k5 0.3180/0.0715 k3 0.2234/0.0492 | AUC knn 0.995 rf 0.997 | 1-NN 0.980 | MMD2 0.2398 (55.9 s) +04:35:48 zs_raw [R1 dm] P/C k10 0.5870/0.1563 k5 0.3792/0.0984 k3 0.2700/0.0688 | AUC knn 0.994 rf 0.996 | 1-NN 0.974 | MMD2 0.2217 (52.6 s) +04:36:39 zs_raw [R2 raw] AUC knn 0.995 rf 0.998 | 1-NN 0.980 | MMD2 0.2409 (48.4 s) +04:37:27 zs_raw [R2 dm] AUC knn 0.994 rf 0.997 | 1-NN 0.972 | MMD2 0.2221 (47.3 s) +04:37:41 zs_raw E_N[pc] sq 6.8776 (LB 235.614 UB 293.664 Dif 634.857) l2 5.4497 (14.1 s) +04:38:48 zs_raw E_N[all] sq 4.1814 (LB 172.291 UB 247.043 Dif 484.856) l2 3.2915 (65.7 s) +04:38:48 zs_raw done in 298 s +04:38:49 fetching generated/imperial_eskd/fewshot_n5/draw4/zs__cal.npz (5.34 GiB) from spark-0110 +04:39:41 zs_cal: zs__cal.npz sha 480dfa29352e (receipt verified), 214500 scored cells, 21382 in the P/C subsample (same rows as the scorer) +04:40:34 zs_cal [R1 raw] P/C k10 0.8331/0.6330 k5 0.7029/0.4867 k3 0.5848/0.3763 | AUC knn 0.957 rf 0.966 | 1-NN 0.871 | MMD2 0.0195 (50.6 s) +04:41:26 zs_cal [R1 dm] P/C k10 0.8550/0.6724 k5 0.7417/0.5207 k3 0.6335/0.4085 | AUC knn 0.950 rf 0.965 | 1-NN 0.859 | MMD2 0.0215 (51.8 s) +04:42:13 zs_cal [R2 raw] AUC knn 0.960 rf 0.967 | 1-NN 0.876 | MMD2 0.0193 (44.6 s) +04:43:00 zs_cal [R2 dm] AUC knn 0.952 rf 0.965 | 1-NN 0.864 | MMD2 0.0215 (46.3 s) +04:43:15 zs_cal E_N[pc] sq 1.1774 (LB 201.624 UB 318.303 Dif 339.004) l2 1.1979 (14.8 s) +04:44:24 zs_cal E_N[all] sq 1.2121 (LB 159.876 UB 256.106 Dif 276.516) l2 1.1939 (68.9 s) +04:44:24 zs_cal done in 336 s +04:44:25 fetching generated/imperial_eskd/fewshot_n5/draw4/lora__raw.npz (5.23 GiB) from spark-0110 +04:45:16 lora5: lora__raw.npz sha 62c5ed4a0339 (receipt verified), 214500 scored cells, 21382 in the P/C subsample (same rows as the scorer) +04:46:09 lora5 [R1 raw] P/C k10 0.8319/0.6369 k5 0.6976/0.4958 k3 0.5748/0.3953 | AUC knn 0.930 rf 0.931 | 1-NN 0.826 | MMD2 0.0218 (50.5 s) +04:47:00 lora5 [R1 dm] P/C k10 0.8529/0.7896 k5 0.7234/0.6314 k3 0.6082/0.4998 | AUC knn 0.900 rf 0.915 | 1-NN 0.783 | MMD2 0.0132 (50.6 s) +04:47:47 lora5 [R2 raw] AUC knn 0.932 rf 0.930 | 1-NN 0.823 | MMD2 0.0218 (45.3 s) +04:48:33 lora5 [R2 dm] AUC knn 0.901 rf 0.915 | 1-NN 0.780 | MMD2 0.0134 (45.4 s) +04:48:48 lora5 E_N[pc] sq 1.5741 (LB 230.760 UB 316.249 Dif 365.332) l2 1.5934 (14.6 s) +04:49:56 lora5 E_N[all] sq 1.4650 (LB 175.857 UB 255.660 Dif 292.765) l2 1.4135 (68.0 s) +04:49:56 lora5 done in 332 s +04:50:02 zs_pseudo: zs__pseudo_all.npz sha 1a7f96c4e8e0 (receipt verified), 214500 scored cells, 21382 in the P/C subsample (same rows as the scorer) +04:50:56 zs_pseudo [R1 raw] P/C k10 0.8357/0.6990 k5 0.6959/0.5347 k3 0.5777/0.4144 | AUC knn 0.957 rf 0.966 | 1-NN 0.864 | MMD2 0.0175 (50.7 s) +04:51:47 zs_pseudo [R1 dm] P/C k10 0.8824/0.7304 k5 0.7728/0.5734 k3 0.6606/0.4530 | AUC knn 0.946 rf 0.967 | 1-NN 0.850 | MMD2 0.0189 (51.8 s) +04:52:35 zs_pseudo [R2 raw] AUC knn 0.960 rf 0.966 | 1-NN 0.869 | MMD2 0.0173 (45.0 s) +04:53:21 zs_pseudo [R2 dm] AUC knn 0.949 rf 0.967 | 1-NN 0.857 | MMD2 0.0189 (46.3 s) +04:53:36 zs_pseudo E_N[pc] sq 1.0414 (LB 195.874 UB 319.289 Dif 324.394) l2 1.0601 (14.6 s) +04:54:45 zs_pseudo E_N[all] sq 1.0927 (LB 157.359 UB 256.190 Dif 265.350) l2 1.0848 (68.2 s) +04:54:45 zs_pseudo done in 289 s +04:54:46 fetching generated/imperial_eskd/fewshot_n5/draw4/scsemi5__raw.npz (0.15 GiB) from spark-0110 +04:55:05 scsemi5: scsemi5__raw.npz sha 7c3743fa01a1 (receipt verified), 214500 scored cells, 21382 in the P/C subsample (same rows as the scorer) +04:56:00 scsemi5 [R1 raw] P/C k10 0.3237/0.0569 k5 0.1904/0.0358 k3 0.1147/0.0234 | AUC knn 0.999 rf 1.000 | 1-NN 0.995 | MMD2 0.1444 (53.0 s) +04:56:52 scsemi5 [R1 dm] P/C k10 0.3696/0.1280 k5 0.2475/0.0782 k3 0.1666/0.0539 | AUC knn 0.997 rf 0.999 | 1-NN 0.988 | MMD2 0.1306 (52.4 s) +04:57:42 scsemi5 [R2 raw] AUC knn 0.999 rf 1.000 | 1-NN 0.996 | MMD2 0.1443 (48.0 s) +04:58:30 scsemi5 [R2 dm] AUC knn 0.998 rf 0.999 | 1-NN 0.989 | MMD2 0.1306 (47.8 s) +04:58:44 scsemi5 E_N[pc] sq 1.7073 (LB 152.984 UB 318.809 Dif 436.098) l2 1.6027 (13.7 s) +04:59:52 scsemi5 E_N[all] sq 2.0287 (LB 126.742 UB 254.270 Dif 385.458) l2 1.7862 (68.0 s) +04:59:52 scsemi5 done in 307 s +04:59:52 unit draw4 of imperial_eskd written to /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/fewshot_n5/draw4 in 2024.8 s (k=10 max |diff| vs scorer 0.00e+00) +04:59:53 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw4/zs__cal.npz +04:59:53 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw4/lora__raw.npz +04:59:53 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/draw4/scsemi5__raw.npz +04:59:53 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/zs__raw_all.npz +04:59:53 removed fetched copy /tmp/claude-1000/-home-sj-server-1/c8102cb0-e04f-4e04-adda-0728604e4435/scratchpad/fetch/generated/imperial_eskd/fewshot_n5/zs__pseudo_all.npz +JOB_EXIT 0 11250s --design fewshot --dataset imperial_eskd --draws 0,1,2,3,4 --threads 6 +JOB_START 2026-10-02T04:59:54+09:00 --design pooled --dataset imperial_eskd --threads 8 +04:59:54 /home/sj_server_1/PBISC/immun-pbmc-fm/model_8_sparse_data_diffusion/plans/paired_finetune_intradataset_20260927/scores_extra/imperial_eskd/pooled done already +JOB_EXIT 0 0s --design pooled --dataset imperial_eskd --threads 8 +UNIT_EXIT 0 diff --git a/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/metadata/request.json b/paper-releases/pbisc-diffusion/updates/20261001T200638Z-extra-realism-metrics/diffusion/metadata/request.json new file mode 100644 index 0000000000000000000000000000000000000000..9ad63c0c314387a8774311089ab5b7b07423f466 --- /dev/null +++ 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Additional realism/diversity metrics for the paired benchmark (5-donor few-pair and 5-fold pooled, 5 cohorts, all arms + real-vs-real control): kNN/RF classifier two-sample AUC, 1-NN accuracy, RBF MMD2, scSemiProfiler E_N (reference-implementation check), precision/coverage at k = 3/5/10 (k = 10 reproduces score_ft exactly). tools/extra_metrics.py, collect_extra_metrics.py, run_extra_unit.sh, tests, scores_extra/. CPU only." +}