diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_Adjusted.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_Adjusted.txt
new file mode 100644
index 0000000000000000000000000000000000000000..3066f06963d7527551dc9dd25319f966c296f5d0
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_Adjusted.txt
@@ -0,0 +1,27 @@
+Mixture	B cell	DC	Monocyte	NK cell	Other	T cell	P-value	Correlation	RMSE
+N064_TOL	0.12597303570205792	0.02345022122228894	0.29046930243725771	0.02927027987667358	0.04011042774960223	0.49072673301211978	9999.00000000000000000	0.39489071873002080	0.94492933041157245
+N064_FU1	0.09131183399185647	0.00000000000000000	0.28137499982329117	0.11834061075918198	0.12294742402506710	0.38602513140060335	9999.00000000000000000	0.47368541644009032	0.89137623448414338
+N038_BC	0.07898179340012859	0.01704422377794295	0.22455292629553408	0.12835711258319618	0.25199030589631083	0.29907363804688741	9999.00000000000000000	0.52594633356757359	0.85667984997049962
+N038_AC	0.09148881352734160	0.01691219158743321	0.25691285475961201	0.11831207147923425	0.30036634795751332	0.21600772068886553	9999.00000000000000000	0.55692970778537665	0.85153435134449329
+N055_AC	0.20649574401361251	0.01147492252666624	0.30703868656252725	0.10339235065991255	0.31322561159239859	0.05837268464488275	9999.00000000000000000	0.44237313755517343	0.95855774619411538
+N136_TOL	0.08319490874390059	0.00000000000000000	0.41132201468931973	0.01866192653816832	0.48682115002861143	0.00000000000000000	9999.00000000000000000	0.80167589345399071	0.71316869206129563
+N136_FU1	0.12951677718680196	0.00000000000000000	0.49534931319920045	0.00024927741360582	0.28270511681707988	0.09217951538331173	9999.00000000000000000	0.83909304425712417	0.55686053966218674
+N138_TOL	0.06513283179642387	0.02954546495398724	0.26601481123908632	0.04871187550925621	0.59059501650124646	0.00000000000000000	9999.00000000000000000	0.59672452356685701	1.15970876644715037
+N138_FU1	0.03591839165762101	0.12490605449120636	0.26402361515273781	0.03389816229873580	0.54125377639969896	0.00000000000000000	9999.00000000000000000	0.72476008240269718	0.91419678853015396
+N128_BC	0.10263939060329515	0.11434157636872136	0.33003860465472740	0.00000000000000000	0.21652510801612415	0.23645532035713193	9999.00000000000000000	0.58023764074003259	0.81441351661926198
+N128_AC	0.06990709923380131	0.14865520303201052	0.32160348464207145	0.00000000000000000	0.19952131523735903	0.26031289785475781	9999.00000000000000000	0.56387271138719619	0.82640899978056492
+N129_BC	0.07418909507431058	0.11625029856891604	0.29686290746016886	0.00427722651178837	0.25176774969584170	0.25665272268897432	9999.00000000000000000	0.69747268166196119	0.71838955983421759
+N129_AC	0.07406803211573089	0.10282294111367649	0.22102385883469933	0.07459832315195399	0.26732111117841811	0.26016573360552131	9999.00000000000000000	0.62496626224662988	0.78214362826345185
+N150_BC	0.05783036248713142	0.06939494716740736	0.18549698722977773	0.08292401532529860	0.25971725318024191	0.34463643461014298	9999.00000000000000000	0.49640584774325858	0.88180443856866464
+N158_AC	0.05196203512123541	0.11445967676450783	0.20724836029513022	0.00782474125997184	0.55214272825486654	0.06636245830428822	9999.00000000000000000	0.93356013695697859	0.55041270410807186
+N159_BC	0.06384009595326935	0.00000000000000000	0.19130261802020196	0.00000000000000000	0.34625081556807163	0.39860647045845710	9999.00000000000000000	0.94947463728012915	0.32858619183765464
+N001_TOL	0.06531718011043176	0.10855064241421446	0.13389375287797498	0.06006416325857154	0.40542357333141960	0.22675068800738774	9999.00000000000000000	0.71020046449767282	0.76153886394987480
+N001_FU1	0.08729439197232457	0.06447045567419678	0.20967289550697593	0.08137051001773400	0.51576223860492199	0.04142950822384675	9999.00000000000000000	0.73366360473979408	0.85902252344278329
+N002_TOL	0.12976599347149795	0.15954164649568162	0.19085828126250437	0.01627905276797448	0.21046919050316296	0.29308583549917855	9999.00000000000000000	0.54805639167124087	0.83627118526859479
+N002_FU1	0.10810159740848600	0.17408802465271875	0.15362730186940199	0.04215002996961694	0.38278548429898168	0.13924756180079456	9999.00000000000000000	0.66829393549460436	0.79732556752293349
+N012_TOL	0.12282503369319525	0.00000000000000000	0.32145412316998673	0.03463283328961085	0.36801933591082309	0.15306867393638413	9999.00000000000000000	0.68240070145930243	0.76501789044464608
+N012_FU1	0.22772676998096694	0.00000000000000000	0.40805779437231826	0.03879107029706853	0.25939416791448017	0.06603019743516618	9999.00000000000000000	0.58555813646115173	0.81421108042742296
+N022_TOL	0.05624897516995018	0.00000000000000000	0.32776698892415834	0.09968662309767011	0.27046913401201084	0.24582827879621058	9999.00000000000000000	0.69609100607720298	0.71814547594686851
+N022_FU1	0.04603543854395944	0.04004778235463228	0.13507632846305276	0.18551608709482484	0.24910486823003419	0.34421949531349644	9999.00000000000000000	0.65943075460949785	0.75261299427237505
+N043_TOL	0.12740496062631321	0.06244786339742713	0.13930318322358984	0.10909619745577508	0.56174779529689478	0.00000000000000000	9999.00000000000000000	0.70218824027653226	0.97505705593848579
+N043_FU1	0.10423723340576643	0.00000000000000000	0.45480682266914640	0.08418502371533193	0.24846600834138002	0.10830491186837518	9999.00000000000000000	0.77871052720378031	0.64336393694505334
diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.CIBERSORTx_refsample_inferred_refsample.bm.K999.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.CIBERSORTx_refsample_inferred_refsample.bm.K999.txt
new file mode 100644
index 0000000000000000000000000000000000000000..42513fe2d6f96140111806c4378b3a0ac1cff663
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.CIBERSORTx_refsample_inferred_refsample.bm.K999.txt
@@ -0,0 +1,2379 @@
+NAME	B cell	DC	Monocyte	NK cell	Other	T cell
+ENSG00000002587	17.93668597191030400	21.33592440746602392	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000002745	10.37429638020744882	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000002933	1.00000000000000000	5.52629237442278942	90.35442646497862995	1.00000000000000000	8.88643533123029883	1.00000000000000000
+ENSG00000003096	1.00000000000000000	9.73725777356455957	1.00000000000000000	2.67224080267557484	6.62645074805039780	2.59489633173843570
+ENSG00000003147	1.00000000000000000	2.63305773154595935	9.48190917238041031	1.00000000000000000	3.31280005029775459	10.45495863355950306
+ENSG00000003393	5.17839208699617437	2.77935943060498314	4.26794717714480409	28.22710145661132231	5.52357028660583360	3.23513634331694089
+ENSG00000003436	1.00000000000000000	5.90529558594787751	1.00000000000000000	1.00000000000000000	79.83111749341892960	7.09013398294761998
+ENSG00000004468	125.74336428035485369	30.14669308793934732	20.60181691428626394	162.91341814330729676	13.20531838554094151	11.50652622528251534
+ENSG00000004660	1.00000000000000000	6.29651221497586988	15.81337790716639446	1.00000000000000000	3.82248287567436984	1.84445195068400780
+ENSG00000004809	1.00000000000000000	1.50720227226617998	9.30715975697385467	1.00000000000000000	3.96214321055522500	1.00000000000000000
+ENSG00000004939	1.00000000000000000	1.00000000000000000	1.00000000000000000	2.63371998039535438	58.33175185821374242	1.00000000000000000
+ENSG00000005187	50.12623513281998555	3.26346763241284465	4.41763499658238157	6.92417061611373441	19.73082633976279965	5.58852605563442761
+ENSG00000005189	3.05390434096905228	2.89287366922435751	1.77531400217087731	1.00000000000000000	11.09609117624338204	1.00000000000000000
+ENSG00000005243	1.00000000000000000	3.69152912344120887	4.30000476502930695	26.47185087595260455	1.00000000000000000	4.85505011565149935
+ENSG00000005249	1.00000000000000000	58.66951629600782070	40.33772709198682094	8.68063217869793036	1186.70350026225605689	5.73215975771343178
+ENSG00000005379	1.88589652728561341	21.40858663942819717	12.43324703342275939	48.63913995030468840	13.68269185582026637	6.40540137620948702
+ENSG00000005471	10.75129875543157709	3.90544857923551270	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000005961	4.67451894780987676	4.43185526535806318	14.74970662100841601	1.00000000000000000	668.94766591811116996	1.00000000000000000
+ENSG00000006025	10.06605178433045644	6.81631758398927978	5.67215421594962521	30.77738877813252927	11.20195942232691877	39.48683964031737048
+ENSG00000006530	20.20275121001658647	16.01935730413706693	13.33118791624271182	79.51840978611663502	7.11913103277331594	24.98823523853991446
+ENSG00000006534	4.42700479780671774	18.99506442201996137	26.15273326616566507	1.00000000000000000	6.70040817942909772	1.00000000000000000
+ENSG00000006555	4.49969260431970408	1.00000000000000000	1.00000000000000000	11.36448059391546650	1.00000000000000000	3.65251989389921095
+ENSG00000006638	6.98802395209582627	2.57728706624605008	1.00000000000000000	2.61917098445594831	72.82400891230427931	1.00000000000000000
+ENSG00000007062	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	10.82594831915385925	1.00000000000000000
+ENSG00000007237	21.30014742172040698	111.12135474845854333	269.54783014677207120	67.19499068544554632	7.49300744831040433	8.53428539045677859
+ENSG00000007264	7.63878766866392933	12.85108493273932595	8.32891641031387131	477.47876677157603353	33.53795013508233325	68.70409585658788387
+ENSG00000007312	461.67175375593194531	6.23910601116031316	50.23798653067540698	18.80502905196218322	5.14937759336100243	2.29533678756476922
+ENSG00000007350	1.00000000000000000	5.68743606213068809	3.07767870013798595	45.41875086084971258	8.22130670524336793	3.23813786929275427
+ENSG00000007402	1.00000000000000000	1.94858660595711974	7.32911392405064177	17.10194702921912580	1.47308165389346435	4.25732899022800915
+ENSG00000007516	17.09078523004658834	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	4.50140056022408608
+ENSG00000007545	6.34731763753314482	6.89728113030597356	8.27789145815646776	29.23933484683723094	2.32872707945788360	10.46548087028213381
+ENSG00000008083	91.88405732939565951	223.91628711425084930	875.98790598807613605	90.86527295573570484	127.17980040972585698	53.86331973621107494
+ENSG00000008394	1.00000000000000000	42.06009964665425827	97.05542823537031438	1.69657286152131381	19.45795471639809548	1.00000000000000000
+ENSG00000008517	161.56414968203279159	101.20492420739481076	195.12772705153150810	1107.87310780673601585	865.59772929952782761	2225.70545496687145715
+ENSG00000008853	13.10974126816693897	1.47433829807418748	4.09172742528137423	6.65924990966506769	1.00000000000000000	2.03691414350891975
+ENSG00000010278	13.23514561736753059	7.86336124172910278	7.77258590949116535	2.56739811912224702	376.65156367660898695	1.94643195154268578
+ENSG00000010310	4.72023809523809668	2.31308068079998685	4.19693094629156516	13.30127142075054714	1.00000000000000000	1.00000000000000000
+ENSG00000010327	1.00000000000000000	6.06821978851415089	95.31487817531665030	1.00000000000000000	2.98603718628749615	1.00000000000000000
+ENSG00000010539	2.19817876827222713	4.84789752870146007	1.00000000000000000	8.06845357577289946	1.00000000000000000	4.85327390953891502
+ENSG00000010671	51.45540140171271304	38.52916132968657337	41.05054003244364935	4.31785003317848659	27.64558756033019193	1.00000000000000000
+ENSG00000011105	1.00000000000000000	1.00000000000000000	2.42338286170005590	1.00000000000000000	28.94739847687887035	1.00000000000000000
+ENSG00000011422	21.29136212626919189	364.51589305696165866	871.47152838407384934	6.44675869650749789	27.12468213306576104	5.13907284768212769
+ENSG00000011590	14.77834199906244805	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000011600	57.49852414928495392	1741.47369713490661525	3543.52880346889014618	2058.35492962444777731	197.40486890884218951	50.23299363401160633
+ENSG00000012124	166.56765674286131684	16.76957131795929712	33.05662468125759546	1.00000000000000000	1.00000000000000000	8.84929356357929287
+ENSG00000012232	3.42248062015504795	8.55005436283130749	58.38975067845854738	25.82547083084596196	2.35723677025419365	2.80505415162455218
+ENSG00000012779	87.52980123890434072	69.12229818533077719	130.07522837921723635	1.00000000000000000	6.62498901369335869	4.31564986737401313
+ENSG00000013016	11.01466314293281812	1.00000000000000000	4.94518994002940460	1.00000000000000000	124.00597501825647839	3.55105326091367735
+ENSG00000013725	18.41951792902546714	12.84185372245021206	18.09459948045804367	64.63741457039522231	106.75772441610645558	154.58898131125999953
+ENSG00000014257	1.00000000000000000	16.94366673430631209	12.06413438210268652	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000014914	1.00000000000000000	21.38397716298255347	24.07393482911587057	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000017427	13.88474541499618731	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000018280	15.01121777298582494	32.65616384899688285	576.59760377222039551	11.49129688071092659	37.60368516794213178	2.96927924379677410
+ENSG00000019169	1.00000000000000000	6.43844951196130744	55.77241234405498460	1.00000000000000000	5.25531914893617991	1.00000000000000000
+ENSG00000019582	19092.14085628233806347	23680.10561023624177324	5241.85964051252540230	1174.96407080925564514	893.20710355619314669	914.37588132818598297
+ENSG00000020129	11.34914401226739677	5.46513159108686786	4.23267681812016061	17.55616901046750655	1.00000000000000000	4.20924261874197292
+ENSG00000020577	6.68163974715711095	8.23387042499660105	35.17713689006399846	1.00000000000000000	11.79507475325298493	7.09013398294761998
+ENSG00000020633	76.83506063574698430	66.97841484099163267	50.47945600870804128	589.10668449974355099	72.76733222876099205	159.55765395946465901
+ENSG00000021300	7.36362166662627526	1.80997894054754749	1.90252707581227543	8.48502994011973222	30.01138620513698640	26.61488478636717758
+ENSG00000021762	4.59712230215828832	16.90285441929993127	55.04452383428142070	94.13341724011733902	3.54683152991034012	26.56448164633818365
+ENSG00000022267	18.70587996750179371	11.78990379884795381	8.88736547250482367	3.77315585135884035	321.96016113635971578	20.67924431080516712
+ENSG00000022556	2.94474540569261700	2.16387337057728146	1.00000000000000000	18.32614648349374775	1.43641441913240753	3.63019463440294388
+ENSG00000023445	153.59140422751590904	14.75158637091013780	32.44978422214012426	13.36907220809468733	62.28434275439730072	115.26397962486346671
+ENSG00000023839	1.00000000000000000	1.00000000000000000	1.00000000000000000	7.00319530441099047	1.00000000000000000	1.00000000000000000
+ENSG00000024422	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	8.10082461731743564	1.00000000000000000
+ENSG00000025708	54.45079411118175017	403.40706434896100063	974.66628729268438747	45.00659967925874128	94.57232246637722994	26.15981924117677337
+ENSG00000026559	8.71010023130301114	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000026751	44.39209688895936523	45.02726356204338032	25.92419385336927462	111.84925846769043289	4.64415977798878110	19.11606796139291120
+ENSG00000027075	25.41988639563273367	61.57903098938662367	85.48819601075017260	533.49593483146998096	100.72421587436396351	307.21424362660843599
+ENSG00000027869	2.78380306814127554	4.41380516205094775	3.26906788169170337	209.40857264950798822	12.33171959004623552	72.65641864672581107
+ENSG00000029534	13.60610594176093713	1.00000000000000000	12.09703010053833161	1.00000000000000000	30.63487225289333438	1.00000000000000000
+ENSG00000030419	4.01834622367812511	3.86392619249726366	6.32481363152291998	34.89426639763534155	6.06723118488293434	11.32770097016202016
+ENSG00000030582	136.02643981529126904	912.00846990787147206	617.88642569218779954	34.35318496420899947	66.17997173410083178	16.49756195473665699
+ENSG00000033122	1.00000000000000000	2.01511210662300044	1.00000000000000000	2.64473684210525661	1.65539389172892815	10.41061996107866783
+ENSG00000033170	109.40785124506635384	22.16732180843595401	11.86363805941551419	28.28360087153482283	46.32451399441087148	33.21749584497017338
+ENSG00000033327	42.28170105783529209	146.40421858352698337	557.68944849691547461	12.30507131060860360	47.98477548122851744	23.32142599515537995
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+ENSG00000221869	30.23951837263738796	653.88702682373582320	1280.14778322016695711	297.43767015602554693	94.67874562128612581	11.74219352511877190
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+ENSG00000225556	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	5.85672656629432709
+ENSG00000225614	1.00000000000000000	10.87314832986506552	3.84738041002277242	3.80569998551994937	1.00000000000000000	1.00000000000000000
+ENSG00000226174	1.00000000000000000	1.57776750635544394	4.14424413931096058	1.00000000000000000	2.87896847021193025	12.46974965491754617
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+ENSG00000227124	18.12593205220041881	2.49031296572280469	1.77232004942848631	9.81446146107471051	3.35038443368916417	1.00000000000000000
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+ENSG00000231389	1959.24402052377172367	4311.69317702756416111	868.06641032840946082	240.92950929847685870	120.58914713130617713	146.33792100890681809
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+ENSG00000237541	138.04932103598500248	166.95607171780386579	59.77106668246079124	25.37770445912079964	4.14934656637419597	14.78082232736136170
+ENSG00000239264	947.21861401458966156	72.42900373100175671	16.13646090644752107	2.59744408945686356	52.34235781505132934	22.19772579578778959
+ENSG00000239282	5.57038391224864160	2.99129010094309233	2.73139793688052013	21.39231981889425427	3.33239602155234094	11.49902865974396882
+ENSG00000239713	37.79271011996002727	24.04904001008830861	19.07453701498968712	196.84104849023609063	18.53308024968782775	129.84343840284367388
+ENSG00000239732	3.10425735046366791	41.07806718824509318	1.90252707581227543	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000239961	8.08194430413846554	440.40112697022760813	1.64020486555697920	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000239998	3.93427230046948440	66.37067725770083371	167.54547334280812265	1.00000000000000000	11.43324101644324742	1.00000000000000000
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+ENSG00000240403	1.00000000000000000	1.00000000000000000	1.00000000000000000	27.23250256130231506	1.47308165389346346	8.38628300572889351
+ENSG00000240505	157.06718658024203705	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000241106	120.77971828222204920	14.17988531346520098	1.00000000000000000	1.00000000000000000	1.00000000000000000	8.65696784073508496
+ENSG00000241399	12.44880284392912095	161.09494967863105330	177.68846159683491237	4.90779198726220045	26.88786921050658307	21.45948726074332669
+ENSG00000241404	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	4.14861460957179684
+ENSG00000241657	1.00000000000000000	3.45821042281217972	1.00000000000000000	1.00000000000000000	37.63260326429796265	75.51912995834051401
+ENSG00000241839	17.31664747953288241	14.55753209888538358	57.15697965270153702	25.79061185357593899	1.63767376610126569	1.00000000000000000
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+ENSG00000242498	1.00000000000000000	18.17994716020638180	12.26576038746501673	1.00000000000000000	2.22669283611384117	1.00000000000000000
+ENSG00000242574	214.43975006597207766	296.41098782702522385	140.13688996721998592	8.86844395575242395	10.22265826217184781	10.90937928719040428
+ENSG00000243156	37.54244341248740113	14.40569173805045722	2.30378096479791905	9.91284184276901037	1.65539389172893125	4.95205943870025411
+ENSG00000243709	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	18.49958574111355958	1.00000000000000000
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+ENSG00000250510	1.00000000000000000	7.36023859127382352	18.92827565451702299	1.00000000000000000	1.00000000000000000	1.00000000000000000
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+ENSG00000253250	2.31717597471021985	5.09672024289861980	1.00000000000000000	1.92644061515656495	10.67981231873964809	4.35795836131632619
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+ENSG00000254470	2.70113058047329124	12.89325970223567985	54.56580181972480403	10.54600954600951290	3.35404896421845145	10.23209801506799543
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+ENSG00000255561	5.27020606678710735	7.51371876700904551	2.60143857343549367	16.07668352086749053	5.55859451624102263	3.23813786929274539
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+ENSG00000255833	1.00000000000000000	9.84599070570649104	2.00664384940607787	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000256235	1.00000000000000000	54.19208605698008796	40.90861030597545778	19.75441525950245136	176.91516730459744622	7.68363726924843338
+ENSG00000256771	8.12440147267851565	3.20496982346989245	1.00000000000000000	9.75720761127111302	8.07029859026685159	23.60575661237013279
+ENSG00000257017	1.00000000000000000	1.00000000000000000	18.27545910645632432	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000257335	1.00000000000000000	1.00000000000000000	16.56094103603852830	7.51711967660280944	1.00000000000000000	1.00000000000000000
+ENSG00000258227	1.00000000000000000	4.03887416095311380	9.09031648413009208	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000258472	1.00000000000000000	8.32877822268091883	3.64131008980455517	1.00000000000000000	1.43641441913240753	1.00000000000000000
+ENSG00000259207	3.78862242052425735	4.32759633846458147	4.47569702809018999	1.00000000000000000	422.88222550298610258	10.38911577714833001
+ENSG00000259330	2.31717597471021985	14.56650495327500572	11.24055238395810719	1.00000000000000000	67.82783064540984697	3.34425135327597811
+ENSG00000260314	1.00000000000000000	29.22031365349903353	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000263961	43.04543946113631137	99.51993619166201199	2.06269925611052241	1.00000000000000000	8.59528819429034563	1.00000000000000000
+ENSG00000266028	15.12770353033957704	47.11530787160751288	84.43808455609399743	5.69868188127820741	9.81834215167551427	1.00000000000000000
+ENSG00000266412	51.79469881642264539	130.15111962899300124	164.93246927654286083	81.59676004717134390	1190.38158717726923896	64.80053603692550723
+ENSG00000267041	9.71461912127873362	1.00000000000000000	1.00000000000000000	1.00000000000000000	2.23854347287590194	1.00000000000000000
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+ENSG00000269556	5.62740575194273696	5.47752706578734649	12.96739424629200244	14.83087723132726232	49.91757372156901340	3.16825672159584215
+ENSG00000271503	141.03632503105174578	119.25951151422518137	200.28888975250330873	4139.74394188307451259	1517.96761231192567720	2204.75532436115281598
+ENSG00000271605	14.40460970920098660	42.64386589534025518	17.03095801645065421	1.00000000000000000	1.00000000000000000	8.93650793650792963
+ENSG00000272398	88.90374813344442373	2.64149704530531881	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000272602	30.12732257351003184	7.53936586256530639	6.27431097730556164	28.78445080189257155	4.91254517403485202	3.42836328314715688
+ENSG00000273173	1.00000000000000000	1.45252964069146340	1.00000000000000000	1.00000000000000000	2.89465706707086623	11.76136367592826915
+ENSG00000273749	4.24675324675324806	35.60968391355958573	53.89320466305961332	2.24688279301745197	25.22459927657547496	1.00000000000000000
+ENSG00000273802	3.43546030199707486	2.07596298687325387	1.00000000000000000	1.00000000000000000	12.13400532230585682	3.36406619385342598
+ENSG00000274588	1.00000000000000000	1.00000000000000000	1.00000000000000000	5.82402146501878804	1.00000000000000000	1.00000000000000000
+ENSG00000274997	3.66446979012549656	2.55681486687892034	1.00000000000000000	8.15299548065471136	1.00000000000000000	1.00000000000000000
+ENSG00000275302	25.07588780986475285	33.61013227652455981	51.59898114556949622	853.16585700216296573	37.81129419727319174	132.36053176851407898
+ENSG00000275385	1.00000000000000000	1.00000000000000000	1.00000000000000000	5.26621160409553557	1.00000000000000000	1.00000000000000000
+ENSG00000275713	7.98150564302315679	1.58493214787084824	1.50433730078676509	4.51409470990833128	35.93388007576938037	3.42013552758954331
+ENSG00000276070	1.00000000000000000	31.86293131206868878	32.24053285227454069	78.92759450277451094	3.46791707798617566	15.18239786903007271
+ENSG00000276085	1.88589652728561341	31.88909710844648870	74.49785545814670229	6.32209065513594393	6.14933058702369628	1.00000000000000000
+ENSG00000276644	1.00000000000000000	47.04044830353645068	20.43969322097670016	3.15796288303839789	11.00238518318717595	1.00000000000000000
+ENSG00000277157	1.00000000000000000	1.50720227226617709	1.00000000000000000	6.49825603264940366	1.00000000000000000	1.00000000000000000
+ENSG00000277161	13.12867059558690030	2.12249205561750287	2.88608072425499396	4.01023479831425789	1.65036420395421590	1.00000000000000000
+ENSG00000277443	57.52052668157095638	30.54093455925302436	180.76028263390676898	1.00000000000000000	8.19076730183992119	1.00000000000000000
+ENSG00000277632	47.86005152138741181	66.80279384147723931	210.95433881705349677	229.50076050329897726	3.57679148389914126	7.48577156921189424
+ENSG00000278463	1.00000000000000000	1.00000000000000000	1.00000000000000000	5.03551251008880563	1.00000000000000000	1.00000000000000000
+ENSG00000278828	7.60897970895497444	8.20217113931273012	8.63501563350347467	15.86619129337972645	221.49473889676352201	8.21783292579257107
+ENSG00000280670	2.51194436044753378	3.17007439239562760	1.00000000000000000	1.00000000000000000	1.00000000000000000	8.11756477670530074
+ENSG00000283154	1.81659317328107028	27.79283477104910105	11.38461669692713230	1.00000000000000000	5.26353026308283223	6.78034682080924345
+ENSG00000284691	34.42477197182490301	5.69167252500358689	3.06301359589264699	9.48674531554320311	10.46615155408338715	17.11767123862021123
+ENSG00000284976	1.00000000000000000	2.08790252393385600	15.58637219785577166	1.00000000000000000	47.50324771423458969	1.94643195154268578
+ENSG00000285043	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	5.81231953801731649	1.00000000000000000
+ENSG00000285053	1.45306270387821601	1.71377587437544321	1.00000000000000000	6.19210799584630500	1.88778409090909260	8.49625187406298821
diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt
new file mode 100644
index 0000000000000000000000000000000000000000..e52e2032a16c79ccce64c632dfc133eccc9fefc3
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt
@@ -0,0 +1,6 @@
+B cell	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
+DC	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
+Monocyte	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
+NK cell	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2
+Other	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2
+T cell	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1
diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt
new file mode 100644
index 0000000000000000000000000000000000000000..2d93c43f9c4044ac544cc566e88727bc5e083fed
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ji2025_chili/fewshot2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt
@@ -0,0 +1,2379 @@
+GeneSymbol	B cell	DC	Monocyte	NK cell	Other	T cell
+ENSG00000002587	11.24143502901961611	21.13294185228420830	3.86633767489330715	0.00000000000000000	0.86606692083877579	2.98998610788154817
+ENSG00000002745	2.67243155597380033	0.00000000000000000	0.00000000000000000	0.00000000000000000	0.00000000000000000	0.00000000000000000
+ENSG00000002933	0.00000000000000000	7.87796484687379905	112.42021313430228702	0.00000000000000000	4.63029466120017918	0.95743901617802840
+ENSG00000003096	0.00000000000000000	2.83267259359679446	0.43239161528338638	0.00000000000000000	2.52949273884423098	0.09563415601352532
+ENSG00000003147	1.47044915306856860	1.29836402833079445	10.72780811220339992	0.00000000000000000	7.69359221571534313	8.24302368531871466
+ENSG00000003393	14.36945705724181543	3.52505935934300441	13.45033105393165407	35.50375542641468485	9.93026498011979264	8.86951752586558761
+ENSG00000003436	8.00189920254730325	1.46737496370759968	1.19951746461882203	8.88922318403889200	95.17784219694240733	8.16914949087986564
+ENSG00000004468	92.25623807630054785	16.84453520306093921	2.50479082308836132	123.66398012371881521	4.81180022748824943	5.39664916756299107
+ENSG00000004660	3.99878402630934238	9.20227755064246544	34.21100723896434914	0.73419261482601772	6.64233392238919329	4.76403124838225711
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