diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt
new file mode 100644
index 0000000000000000000000000000000000000000..e52e2032a16c79ccce64c632dfc133eccc9fefc3
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt
@@ -0,0 +1,6 @@
+B cell	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
+DC	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
+Monocyte	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
+NK cell	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2
+Other	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2
+T cell	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1
diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt
new file mode 100644
index 0000000000000000000000000000000000000000..41d4cf2d07ebd1c56b21f36da49e51bd5f27f6ea
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt
@@ -0,0 +1,2417 @@
+GeneSymbol	B cell	DC	Monocyte	NK cell	Other	T cell
+ENSG00000001561	11.35791675642209597	5.98197880447311725	4.21417495525250807	57.21376002817540751	8.38349991754205881	17.55559458696660968
+ENSG00000002549	23.41189434132346392	318.71336882980335758	184.65202939217959965	66.06153166330220472	3.21064232946698969	32.72224222414665462
+ENSG00000002587	19.91331715788757251	12.22727047249924937	0.16696525998624190	0.00000000000000000	0.27742566661526741	0.00000000000000000
+ENSG00000002933	3.86003903490990163	37.86955359124517884	163.15071757798898489	1.05441865554526659	3.51950770885771647	6.04410284207396575
+ENSG00000003249	29.44726983021933719	0.00000000000000000	0.10325404766724718	0.00000000000000000	0.68640479157713896	7.03229650131212036
+ENSG00000003436	1.24603961955779141	0.00000000000000000	0.41935105061235478	0.89508335716369369	50.65270385295824696	1.71391717881769656
+ENSG00000004468	43.59780599830328640	27.20971469336639359	9.80765953295907167	206.82493193785805374	12.69338409204838314	35.04594192039452594
+ENSG00000004799	9.05089926763690755	22.58614002019730194	107.30779060218524990	2.55147614492097574	1.01727425303259444	2.79680935206193659
+ENSG00000004838	0.81457180573737509	0.69793359938999844	0.48780224288388618	6.53783982146805798	0.69466889968649004	1.50771812684962470
+ENSG00000004866	2.07825271931283018	4.44501960925251272	3.33147274445281028	10.25171671059175793	35.44076193995553581	3.90435550417887711
+ENSG00000005100	19.11693569581996144	16.52504202040100978	16.09329762059694602	14.64504439509778244	4.95539127919719213	38.96755971991449741
+ENSG00000005102	1.39949097706349912	0.18140112588871446	0.49090872259288171	0.20053745214020938	0.92063401075315221	8.71853397123271456
+ENSG00000005187	11.35178053820532718	0.18775378318310251	1.00070615590689460	1.65191577186320515	10.50157693830300865	3.60455383025048581
+ENSG00000005243	0.44356436064029858	1.68692023643728239	0.99905113518137423	12.44705003084528272	2.01036330342976077	1.02587392497779883
+ENSG00000005249	41.38455064523530069	0.00000000000000000	35.02805264743259528	49.69956941536913320	1517.00936174040589322	38.21743356723170137
+ENSG00000005379	1.00212612489211295	24.93272463933053018	17.79353590779930272	147.66369122446513984	8.14678743738682520	45.72120039479766973
+ENSG00000005381	0.58479820965754159	2.28185354546149499	17.82555656844312963	0.28963504023004372	1.48862829331502655	0.93673544251593432
+ENSG00000005471	28.42680020918184525	0.79370996529217952	0.24250125000811637	0.79943309116088679	0.79867051527431732	0.54300982403437736
+ENSG00000005844	87.66341096898970875	145.40500966200809785	328.19557120124511584	818.70457916085649686	68.86398619175868419	251.08029509780567423
+ENSG00000005961	35.65906691736261536	0.00000000000000000	29.54992353145682316	50.88401667758299141	1699.73943386072210160	27.75977479303460171
+ENSG00000006025	25.74398736511486518	24.88202609639150253	8.44949503011209657	68.41657620679215768	5.10787722771933694	27.55428457035225165
+ENSG00000006530	17.12355986602843672	18.82760843433743148	7.98571198337752719	74.08630430553053259	6.72692960847487953	32.08475044169141199
+ENSG00000006534	6.39251310522635041	70.93754494281714074	114.20276882996286361	6.22646762478967197	7.62472064898093738	5.54641695275629054
+ENSG00000006555	16.27362390872205822	4.36416835299868566	2.13619681793760341	31.19920988462351374	4.95471337731215566	10.89722509931623762
+ENSG00000006638	5.09379860379493010	0.00000000000000000	0.64598161355308104	3.37360775452782091	66.24103640561800432	8.44696217548725592
+ENSG00000007129	13.38237775575776922	10.10631902774141011	4.79227306130908204	14.58682375535668108	8.22895911757526655	34.80990259026097533
+ENSG00000007237	18.46282967189471691	91.70541067398555413	293.38019661695352625	72.91175676190859178	25.35015025310834957	13.80797990979283796
+ENSG00000007264	16.82162624790678507	5.35041245747532912	9.27145281161290491	318.74192178174615719	18.30262416741901532	50.36729620950023900
+ENSG00000007312	263.38109889312630685	0.00000000000000000	14.70350317519346639	21.00251265534665279	13.94772286212215562	22.21198262679534707
+ENSG00000007350	0.25891240954521594	0.91694177924213260	0.56883915771056970	46.88939718387489108	1.89005603226578711	5.26729099269494316
+ENSG00000007402	1.27937270893134070	4.15717738365134704	0.78624789948414842	24.86516044148062576	2.14182341536995269	3.95238464548722357
+ENSG00000008277	0.91609628910474605	0.00000000000000000	0.64687368770974496	10.00900653796742290	0.92288956568125624	3.03027883098968465
+ENSG00000008282	145.56016695695757335	28.58756323505245334	28.18577483313907805	26.59034652981755187	35.83109492708461374	48.03801790425355023
+ENSG00000008394	4.53250060417438316	72.28764396145433579	110.73730486266507000	1.13680976250422172	7.69871177778929816	4.66976903675144861
+ENSG00000008405	25.05996196161870060	6.28663536942257650	5.81303864416192795	52.29292887772752607	9.94724794058517681	20.04094916661615500
+ENSG00000008516	0.00000000000000000	0.46912389814637956	73.61568560045989784	3.48496725544367969	0.00000000000000000	8.11699712209931690
+ENSG00000008517	60.02803079939177877	27.55028094980890785	40.56395514480094278	578.18728676647936027	171.53171908456894812	926.93776068749400565
+ENSG00000009694	1.42757690040783003	0.00000000000000000	0.96714822477660978	7.01581818280796377	4.25786280076662926	22.95967965318679305
+ENSG00000010278	17.24271829136401735	0.00000000000000000	8.85236807471796361	12.16984956887437619	256.37546712453007558	8.25796935586255998
+ENSG00000010327	23.20040631763767891	246.74908620788067992	733.49830685542690389	22.34227594985790333	45.45646639078838547	36.43085394300765500
+ENSG00000010610	15.64601169663091440	235.30019202960590974	188.19061658772278633	14.85170000628964893	25.94366552240233403	203.86765502001088635
+ENSG00000010671	167.08517450446771591	103.23772485875026916	86.11881485253877599	13.00231116745084314	116.45025285559300698	10.75256764859549463
+ENSG00000011105	2.49676565986471921	0.00000000000000000	1.10834666160977502	3.43824113329576830	93.60764450839056394	2.89758177487083968
+ENSG00000011422	5.44433906902371145	198.89053279624695847	217.21069443274384980	5.51907217153638463	11.48582381260360386	9.80369386989112002
+ENSG00000011590	13.21787881996636926	0.00000000000000000	0.00000000000000000	4.92877542221119747	1.46978042076921800	12.50432565980029409
+ENSG00000011600	57.41836288023250745	844.86584222440444591	1726.25944080154090443	733.21088407450508839	111.72818898444448621	55.72943878025525066
+ENSG00000012124	333.93422099177007567	0.00000000000000000	7.24984620390452861	10.34581881531781988	19.42779194870801973	18.16362128545227606
+ENSG00000012779	312.12751400682503800	180.50431522627158643	310.81254409713039877	27.36037013071718604	31.34914717927260241	29.43078698792548309
+ENSG00000013016	22.07535662061477666	0.00000000000000000	7.34325891076363568	8.84458450178605737	228.48199839847913495	8.56803125495487805
+ENSG00000013573	9.05534985855542729	0.00000000000000000	3.60213492248912370	45.90043769239953519	5.88183724989263101	26.86049515431585633
+ENSG00000013725	42.61378210927370702	21.85136228561870197	13.78891056048608732	69.37961645077540140	44.78784103015431128	419.55604018792575971
+ENSG00000014257	0.00000000000000000	28.70345287794916445	31.48882281776273118	1.88462067684856804	1.05413283902243937	2.18284873691617598
+ENSG00000014914	4.82870147412646222	83.42024334554302811	66.11766165824415964	2.05424335268904024	5.24131854830753507	4.89388448418773336
+ENSG00000018280	45.65327327221573483	128.22453755087786931	962.66595000631832590	29.46179658968449289	111.33732465557478974	46.07401520975120235
+ENSG00000019102	0.42117439095859149	0.00000000000000000	0.14971059528329594	0.00000000000000000	8.64686349357567074	0.28227373143497969
+ENSG00000019169	2.21318570416467875	16.73831354921252768	99.67257125413426877	1.73225628714975510	0.00000000000000000	1.30518825858981957
+ENSG00000019582	12530.46604974432557356	11558.48251182579588203	3303.98707202448485987	1408.91784639627258002	1003.70266756254727625	1044.58934383795894973
+ENSG00000019991	0.46384769101161633	8.07898368665927791	24.26160004509690893	1.08832532907650648	2.30338650135542578	0.92272166766722674
+ENSG00000020633	126.40369613423028738	72.98469079925166625	70.86597053392101486	653.38514915517453119	64.43821719772965650	175.66350496512995960
+ENSG00000021300	8.95638070349009219	0.00000000000000000	2.24491737248732015	7.93708181004793190	4.02786289302925660	48.02213111506616627
+ENSG00000021762	7.96427781272290769	47.36529993216198875	26.80982456047000895	163.56278623857045318	9.77489319831692960	16.02811289092447922
+ENSG00000022267	8.86739757846814491	0.00000000000000000	4.83638639334242981	9.79606407514076594	203.84944545569925367	11.34627716566510180
+ENSG00000022556	0.40561169702273386	6.11451141895412587	2.77090631749025018	18.53115400165371440	0.00000000000000000	11.68959268994788125
+ENSG00000023171	0.00000000000000000	51.36208796379045083	12.65400632690578853	18.55086242308600575	5.16773955543834340	11.55786799646981855
+ENSG00000023445	398.82473390898229582	20.26143575510123185	34.84392668658826864	35.21972041059162706	25.24002774747707889	111.91990515835713893
+ENSG00000024422	0.00000000000000000	0.15158845962078848	0.00000000000000000	0.18997178184027103	16.17492596135765126	0.00000000000000000
+ENSG00000025156	14.81707572193976041	7.09225181565473495	3.86621397405192369	20.38547240815018569	1.97726279854745202	27.81160566424669867
+ENSG00000025708	80.71865048740140480	889.43125788749614458	1248.06774915281471294	81.62065147025748502	119.78892912098328338	86.49828444791009474
+ENSG00000026559	23.28152829719184780	0.00000000000000000	0.37503627973952841	0.35117931261784008	0.21519305737667010	0.73245694083110080
+ENSG00000026652	9.42012609713717985	11.57054191319849501	26.90788070544005706	61.25589076991578708	4.73969681541908994	27.32863050466629673
+ENSG00000026751	5.76818594668236884	155.31746081130890502	48.35934551273837911	273.73425236516749237	4.89420110146695997	28.35356637759774756
+ENSG00000027075	23.77683372718906085	14.76017691835226309	18.57759562197793812	335.49173244988645592	45.61067295012368561	173.79703105658521167
+ENSG00000027869	9.48528141888973764	0.00000000000000000	6.30425853799096814	177.58175195751002207	14.46543082831904314	54.32268796357131180
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+ENSG00000028277	337.79179534349151481	222.53416000162184218	359.93590375674574489	57.68381853267989356	37.01446036293150144	82.23639255697867156
+ENSG00000029534	12.16775733792447767	0.00000000000000000	2.60270402357295749	5.27609321007655474	90.48892597678096195	2.33155397677691667
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+ENSG00000030582	167.68348649435949937	1542.45007840916036912	1519.19137517308035967	81.04948605632787917	140.35788500830821590	88.78566647567488701
+ENSG00000031081	14.81569013878862329	80.39782900973082747	45.12282158396173770	18.00803903115375348	0.71426432813419738	9.72459298734135125
+ENSG00000033327	24.52590396120326943	100.20824940155729621	91.22446745835696902	5.92927239057291011	24.65672748274420911	7.68467644200344147
+ENSG00000034053	7.64749234897362751	4.09585949831124196	6.56229869338922089	72.50520244567668726	14.00830212454001611	98.53139518488492854
+ENSG00000035115	32.64122179806701496	12.69481539429773242	7.57079611462039370	24.36489538124447662	20.87295142434718542	82.76883626300315200
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+ENSG00000036448	1.09641794648579904	3.33483416179591963	1.08266268658495357	215.58356861125207615	3.29924069378060469	14.30938307617009109
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+ENSG00000038427	129.80470567383162006	2116.89639811121969615	3192.38125611294344708	69.09148713006030107	152.61326512822620316	121.31554411142582239
+ENSG00000038945	0.42597150782053139	23.92499486496584638	16.18184310561140293	0.14340110347812579	5.36345135444173238	0.31101284963432146
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+ENSG00000040199	23.98127110500405834	8.79230814316333564	5.51770236549901938	5.16972430129381433	2.32477679747618327	9.98520183003344108
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+ENSG00000047365	65.23610405425718284	29.51376555326801210	47.93657774862393950	193.63296410524270641	14.21962042130136794	92.30689103653365635
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diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_hires/fractions_results.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_hires/fractions_results.txt
new file mode 100644
index 0000000000000000000000000000000000000000..e2af2392c2fd5a776c7661903cf454f98d0b5f39
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot2/out_hires/fractions_results.txt
@@ -0,0 +1,78 @@
+Mixture	B cell	DC	Monocyte	NK cell	Other	T cell
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+Skin-S142	0.0296771095312621	0.1471384223159231	0.5907375674070225	0.0700123550722771	0.0099600537132397	0.1524744919602752
+Skin-S152	0.0151567614183942	0.2263800397392883	0.2927910296164512	0.1485905363162457	0.0	0.3170816329096206
+Skin-S38	0.0947341158375671	0.0	0.1346190800905263	0.1032475400567342	0.008160689857306	0.6592385741578664
+Skin-S43	0.0	0.0767485445801588	0.1824450247325599	0.0683586363212044	0.1251394115438924	0.547308382822184
+Skin-S46	0.0	0.0387716364235693	0.4101163448720629	0.1315201353080304	0.1883390327260852	0.2312528506702521
+Skin-S52	0.1111324496226963	0.0044774471620687	0.0816681777231102	0.0	0.2460216040413916	0.5567003214507331
+Uri-S134	0.0347788048976236	0.185329703039419	0.3788961952988145	0.1018830893929257	0.0575180170252754	0.2415941903459415
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diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot3/out_fractions/CIBERSORTx_Adjusted.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot3/out_fractions/CIBERSORTx_Adjusted.txt
new file mode 100644
index 0000000000000000000000000000000000000000..24409fde50d75e93292543290bb5c293214dbd36
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/ye2026_sepsis/fewshot3/out_fractions/CIBERSORTx_Adjusted.txt
@@ -0,0 +1,78 @@
+Mixture	B cell	DC	Monocyte	NK cell	Other	T cell	P-value	Correlation	RMSE
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