diff --git a/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_deg_limma.csv b/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_deg_limma.csv
new file mode 100644
index 0000000000000000000000000000000000000000..99b74054725d0a2a82f6789bd449c9283df29399
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_deg_limma.csv
@@ -0,0 +1,1501 @@
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diff --git a/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_headline.csv b/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_headline.csv
new file mode 100644
index 0000000000000000000000000000000000000000..d89b676810169533ff81cd8b2716eecf81cfbdb7
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_headline.csv
@@ -0,0 +1,101 @@
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+giroux2022,fewshot,fewshot_n5/draw0,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@6400d82f,0.3477095718172361,0.2819941969362539,0.1036482831361291,0.7063018404234562,0.6790100653817397,0.8779127648861704,0.0015242575785035,0.7640912590762394,0.9337152499913626,0.966095630119118,0.3392873663116775,0.6886472967727262,0,3,0.0,1,0.0041921874063268,3,1,7,5,0,91,0.0090429540316503,21,0.917638639110968,91,1,53,5,0,92,0.0,13,1.060437499395541,106,0,34,5,0.052,0.0092567161968429,0.048,0.0185134323936858,0.0458974635924961,0.0470239819785315,5,0.192,0.0050554382211183,0.226,0.0101108764422366,0.277423710951683,0.2257209708317081,5,True
+giroux2022,fewshot,fewshot_n5/draw0,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@a1c99db4,0.112011110785746,0.0192880674610613,0.0115501192486308,0.4941527115486404,0.3602224806014599,0.8779127648861704,0.0015242575785035,0.7640912590762394,0.9337152499913626,0.966095630119118,0.1102634660206965,0.4794554774683037,0,3,0.0,0,0.0,3,5,0,5,1,91,0.1667233752977203,2,0.0184244168943553,91,10,1,5,0,92,0.0,1,0.0303191533977791,106,0,1,5,0.02,0.0083559404104188,0.03,0.0167118808208377,0.0306343892539591,0.0204849587945313,5,0.112,0.0050756587779478,0.104,0.0101513175558957,0.1477066127966221,0.1133865451813214,5,True
+giroux2022,fewshot,fewshot_n5/draw0,lora5,"LoRA, 5 donors",lora,test_raw.npz@f04c5725,0.243392212681724,0.1602044193859629,0.1503596931938803,0.4709654147613206,0.3558010145456839,0.8779127648861704,0.0015242575785035,0.7640912590762394,0.9337152499913626,0.966095630119118,0.2363051968778328,0.4567802957459237,0,3,0.0002783964365256,0,0.0,3,4,0,5,0,91,0.0178117048346055,4,0.0736976675774214,91,1,4,5,0,92,0.0,4,0.0909353825123776,106,0,3,5,0.016,0.0084417450634695,0.0279999999999999,0.016883490126939,0.0182497890000876,0.0269677613348872,5,0.128,0.0050756587779478,0.132,0.0101513175558957,0.1529544670733114,0.1221131460927288,5,True
+giroux2022,fewshot,fewshot_n5/draw0,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@f04c5725,0.3713484591899215,0.2631585912428766,0.2369962982005961,0.4709654147613206,0.3558010145456839,0.8779127648861704,0.0015242575785035,0.7640912590762394,0.9337152499913626,0.966095630119118,0.3614585352611693,0.4567802957459237,0,3,0.0023255813953488,0,0.0,3,1,0,5,1,91,0.2426245616005642,4,0.0736976675774214,91,16,4,5,0,92,0.2266187050359712,4,0.0909353825123776,106,3,3,5,0.028,0.0303372015158285,0.068,0.060674403031657,0.0435085363352938,0.0639149047029988,5,0.128,0.0050756587779478,0.132,0.0101513175558957,0.1529544670733114,0.1221131460927288,5,True
+giroux2022,fewshot,fewshot_n5/draw1,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@ac755a41,0.3737738574895972,0.2735476412199826,0.2592572777435345,0.5012527613870964,0.4213823183344052,0.869641265276148,0.0030731574242546,0.742605126534491,0.9277129870450176,0.962775006266967,0.3690427811489125,0.4867620651471223,0,50,0.0,0,0.0288794763188294,84,0,3,5,3,55,0.6346408757388976,6,0.1169361359102938,330,173,11,5,9,55,1.1583195408525435,3,0.7379903544238056,402,204,47,5,0.0959999999999999,0.0071456460107042,0.102,0.0142912920214085,0.0751465954590871,0.0901854407938871,5,0.132,0.0051051186909601,0.122,0.0102102373819202,0.1254794763718704,0.1357845720346004,5,True
+giroux2022,fewshot,fewshot_n5/draw1,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@6400d82f,0.3422318017855569,0.2365232191412208,0.0943313140783945,0.6850615995058686,0.6119084777401583,0.869641265276148,0.0030731574242546,0.742605126534491,0.9277129870450176,0.962775006266967,0.3355464992087504,0.6672313002320601,1,50,0.169683257918552,0,0.0,84,13,0,5,5,55,0.7123226379901747,18,0.5284924069198402,330,148,68,5,11,55,1.6512549537648613,16,0.8496113316927332,402,182,93,5,0.08,0.0094478340108794,0.088,0.0188956680217589,0.0543586113705015,0.0863630813286861,5,0.24,0.005078840396337,0.256,0.0101576807926741,0.2640635344527097,0.2523038009816635,5,True
+giroux2022,fewshot,fewshot_n5/draw1,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@aee9467d,0.3291842953083055,0.2305653668256675,0.2045433906974841,0.5162038431521979,0.409261912915642,0.869641265276148,0.0030731574242546,0.742605126534491,0.9277129870450176,0.962775006266967,0.3190494302174962,0.5014759024227409,0,50,0.0144092219020172,0,0.0096264921062764,84,4,1,5,1,55,0.7204610951008645,5,0.0850444624802137,330,63,8,5,6,55,1.667778519012675,5,0.589181287942986,402,70,37,5,0.068,0.0089029077569827,0.068,0.0178058155139655,0.0435115290243142,0.0667077298744392,5,0.1159999999999999,0.0051051186909601,0.1359999999999999,0.0102102373819202,0.1256949628240726,0.1342620012711217,5,True
+giroux2022,fewshot,fewshot_n5/draw1,lora5,"LoRA, 5 donors",lora,test_raw.npz@935e890f,0.3563495970343535,0.2540917189479553,0.2523250741286013,0.5012527613870964,0.4213823183344052,0.869641265276148,0.0030731574242546,0.742605126534491,0.9277129870450176,0.962775006266967,0.3471490836187307,0.4867620651471223,1,50,0.0985637848493382,0,0.0288794763188294,84,7,3,5,1,55,0.7419907236933251,6,0.1169361359102938,330,306,11,5,7,55,1.6744809109176155,3,0.7379903544238056,402,103,47,5,0.068,0.0085430339466502,0.076,0.0170860678933005,0.0315167345585654,0.0790201365546158,5,0.132,0.0051051186909601,0.122,0.0102102373819202,0.1254794763718704,0.1357845720346004,5,True
+giroux2022,fewshot,fewshot_n5/draw1,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@935e890f,0.4237269637292827,0.2903174499946198,0.2726189772464026,0.5012527613870964,0.4213823183344052,0.869641265276148,0.0030731574242546,0.742605126534491,0.9277129870450176,0.962775006266967,0.4098068885280469,0.4867620651471223,0,50,0.0,0,0.0288794763188294,84,0,3,5,0,55,0.007137192704203,6,0.1169361359102938,330,3,11,5,1,55,0.0914076782449725,3,0.7379903544238056,402,1,47,5,0.04,0.0285500479045215,0.06,0.057100095809043,0.0527412475847668,0.064689138428877,5,0.132,0.0051051186909601,0.122,0.0102102373819202,0.1254794763718704,0.1357845720346004,5,True
+giroux2022,fewshot,fewshot_n5/draw2,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@ac755a41,0.1318772546008392,0.0479696906777865,-0.0150489708296107,0.3964390901836053,0.289578857389595,0.9104124563197754,0.0015633021491813,0.8127871688310353,0.9526629414859596,0.9759830070639476,0.1301514299953333,0.3866090394252903,0,63,0.0,0,0.0,63,0,0,5,0,161,0.0029411764705882,17,0.3202004014430841,407,1,10,5,0,142,0.0,12,0.3649442474081072,404,0,8,5,0.012,0.0070218609636721,0.016,0.0140437219273443,0.0143579756694039,0.0141944296467,5,0.18,0.0050327399150997,0.16,0.0100654798301994,0.1899170802383304,0.1786452018716356,5,True
+giroux2022,fewshot,fewshot_n5/draw2,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@6400d82f,0.3361744709902635,0.290805816985182,0.1591693269484684,0.6900599750313551,0.6768295934178677,0.9104124563197754,0.0015633021491813,0.8127871688310353,0.9526629414859596,0.9759830070639476,0.3289924805831215,0.6742906105457502,0,63,0.007415647015202,2,0.0373399034912725,63,3,3,5,1,161,0.4112206461644067,53,1.5941244231366665,407,33,154,5,0,142,0.1751378443570746,36,2.379232480182067,404,4,80,5,0.048,0.0091795505859806,0.068,0.0183591011719612,0.0388798162081003,0.0577876261906808,5,0.284,0.0050112541997134,0.2659999999999999,0.0100225083994269,0.3264401451404372,0.292445806854585,5,True
+giroux2022,fewshot,fewshot_n5/draw2,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@8ac9ec21,0.1229449595444243,0.0469073507299643,0.0288432765423122,0.4135379923236512,0.2809891270676642,0.9104124563197754,0.0015633021491813,0.8127871688310353,0.9526629414859596,0.9759830070639476,0.1212157953640547,0.4040239235047601,0,63,0.0,0,0.0,63,0,0,5,0,161,0.0,9,0.1280801605772336,407,0,4,5,0,142,0.0,8,0.1830826760685598,404,0,4,5,0.008,0.0082457081987571,0.028,0.0164914163975142,0.0286725391862939,0.0245549627962971,5,0.176,0.0050327399150997,0.15,0.0100654798301994,0.1925623941165099,0.1716577363776611,5,True
+giroux2022,fewshot,fewshot_n5/draw2,lora5,"LoRA, 5 donors",lora,test_raw.npz@fedb8e80,0.230513969445487,0.1559240583685004,0.1504091220896271,0.3964390901836053,0.289578857389595,0.9104124563197754,0.0015633021491813,0.8127871688310353,0.9526629414859596,0.9759830070639476,0.226823963146338,0.3866090394252903,0,63,0.0035599857600569,0,0.0,63,1,0,5,2,161,0.9314214607267502,17,0.3202004014430841,407,284,10,5,0,142,0.0,12,0.3649442474081072,404,0,8,5,0.032,0.0084460193165379,0.0199999999999999,0.0168920386330759,0.0128344244238923,0.0379495694622056,5,0.18,0.0050327399150997,0.16,0.0100654798301994,0.1899170802383304,0.1786452018716356,5,True
+giroux2022,fewshot,fewshot_n5/draw2,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@fedb8e80,0.369781887210886,0.2666273057795406,0.260430342889284,0.3964390901836053,0.289578857389595,0.9104124563197754,0.0015633021491813,0.8127871688310353,0.9526629414859596,0.9759830070639476,0.3606682995958165,0.3866090394252903,0,63,0.0394265921092251,0,0.0,63,2,0,5,4,161,1.9230578868007089,17,0.3202004014430841,407,53,10,5,4,142,6.149683867439874,12,0.3649442474081072,404,41,8,5,0.048,0.0277772594504481,0.0699999999999999,0.0555545189008962,0.0296437707596687,0.0651182316606198,5,0.18,0.0050327399150997,0.16,0.0100654798301994,0.1899170802383304,0.1786452018716356,5,True
+giroux2022,fewshot,fewshot_n5/draw3,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@ac755a41,0.2086898869287862,0.0899103999806768,0.0553904948019966,0.4657480400911531,0.3682998803763819,0.915782818090588,0.0016241434498649,0.8188912532619861,0.9556708168304804,0.9775340633995764,0.2073250504374558,0.4559937133768053,0,27,0.0,0,0.0,27,0,0,5,0,145,0.0,9,0.2021397198948722,332,0,7,5,0,153,0.0,8,0.2425757549768561,415,0,5,5,0.024,0.0070669053103726,0.028,0.0141338106207453,0.0356153838822774,0.0258572124525614,5,0.188,0.0050579979464831,0.18,0.0101159958929662,0.1823339587689489,0.1675536562496731,5,True
+giroux2022,fewshot,fewshot_n5/draw3,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@6400d82f,0.3903722846107435,0.3331490915932292,0.230276911970597,0.6834646008550196,0.6776416946600692,0.915782818090588,0.0016241434498649,0.8188912532619861,0.9556708168304804,0.9775340633995764,0.3826865585706537,0.6698843799481754,0,27,0.0123978585517047,3,0.0260737201509497,27,11,5,5,1,145,0.3393706039688595,45,1.437525565794222,332,21,108,5,0,153,0.3013134663524255,35,2.516090096114514,415,6,101,5,0.024,0.0094211311577319,0.044,0.0188422623154639,0.0432139167395405,0.047880866083658,5,0.224,0.0050357345357164,0.26,0.0100714690714329,0.2738976679645515,0.267304625290614,5,True
+giroux2022,fewshot,fewshot_n5/draw3,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@2d7f83dd,0.1351275881540741,0.0616049665096885,0.0531837157956086,0.4873794301776414,0.3674524969593699,0.915782818090588,0.0016241434498649,0.8188912532619861,0.9556708168304804,0.9775340633995764,0.1328166437694387,0.4777620072600095,0,27,0.0,0,0.0052392403884941,27,14,1,5,2,145,0.1838312211547619,0,0.0288771028421246,332,237,1,5,0,153,0.0,0,0.0,415,0,0,5,0.016,0.008441353816709,0.03,0.0168827076334181,0.0393849720866443,0.029532276689254,5,0.168,0.0050579979464831,0.182,0.0101159958929662,0.1727778039382558,0.1571731776303729,5,True
+giroux2022,fewshot,fewshot_n5/draw3,lora5,"LoRA, 5 donors",lora,test_raw.npz@4efbb07e,0.241862957661579,0.1753282029973927,0.1469755164262765,0.4657480400911531,0.3682998803763819,0.915782818090588,0.0016241434498649,0.8188912532619861,0.9556708168304804,0.9775340633995764,0.2376014185600521,0.4559937133768053,0,27,0.0,0,0.0,27,0,0,5,0,145,0.0139314572304263,9,0.2021397198948722,332,1,7,5,0,153,0.0554938956714761,8,0.2425757549768561,415,1,5,5,0.056,0.0085258864306506,0.046,0.0170517728613013,0.0257326394529408,0.0475528917934606,5,0.188,0.0050579979464831,0.18,0.0101159958929662,0.1823339587689489,0.1675536562496731,5,True
+giroux2022,fewshot,fewshot_n5/draw3,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@4efbb07e,0.3613647484944552,0.262736836200432,0.215280922639362,0.4657480400911531,0.3682998803763819,0.915782818090588,0.0016241434498649,0.8188912532619861,0.9556708168304804,0.9775340633995764,0.352323750631146,0.4559937133768053,0,27,0.0057273768613974,0,0.0,27,1,0,5,0,145,0.361933605612811,9,0.2021397198948722,332,24,7,5,0,153,0.0,8,0.2425757549768561,415,6,5,5,0.048,0.0338810083041049,0.0699999999999999,0.0677620166082099,0.0488840043719362,0.0617544127079613,5,0.188,0.0050579979464831,0.18,0.0101159958929662,0.1823339587689489,0.1675536562496731,5,True
+giroux2022,fewshot,fewshot_n5/draw4,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@ac755a41,0.4153928529791538,0.2349940031388386,0.2143660649853008,0.6280870820074911,0.4544555324247401,0.8853326307359973,0.0019446705473705,0.7235487166892616,0.9373339327546504,0.967879577033796,0.4073272904549719,0.6109767549267705,0,1,0.0008112493239588,0,0.0001968891514077,1,27,1,5,2,136,1.500453291251566,38,1.3565087519851406,163,393,63,5,2,128,2.4936030172320023,31,2.063265221187468,155,411,109,5,0.008,0.0071254315107079,0.03,0.0142508630214158,0.0366736084857047,0.0345193574542344,5,0.2,0.0051056055167158,0.206,0.0102112110334316,0.2144498512164462,0.1814095854828585,5,True
+giroux2022,fewshot,fewshot_n5/draw4,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@6400d82f,0.428531626840907,0.2255111651242506,0.2145398965439769,0.7348645310219669,0.5762677755294683,0.8853326307359973,0.0019446705473705,0.7235487166892616,0.9373339327546504,0.967879577033796,0.420897146951334,0.7148897823761138,0,1,0.0,0,0.0,1,19,0,5,0,136,0.7248748220620166,35,1.3482525645318937,163,221,587,5,1,128,1.6926201760324984,30,2.1478646970816166,155,225,621,5,0.016,0.009469676322184,0.048,0.018939352644368,0.0428368692092253,0.0329153778615641,5,0.192,0.0050761487362235,0.246,0.010152297472447,0.2692777134482091,0.2172073431760499,5,True
+giroux2022,fewshot,fewshot_n5/draw4,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@8f98decb,0.4388308420922099,0.253553664527302,0.2591252621792077,0.6509173585406117,0.4570123458902262,0.8853326307359973,0.0019446705473705,0.7235487166892616,0.9373339327546504,0.967879577033796,0.4285161551291852,0.6330998220619809,0,1,0.0,0,0.0001968891514077,1,47,1,5,2,136,0.997960906190327,35,1.3565087519851406,163,461,57,5,1,128,1.59846547314578,33,2.072920206513196,155,251,82,5,0.032,0.0088172301426697,0.05,0.0176344602853395,0.0592467402822405,0.0460355924818733,5,0.176,0.0051056055167158,0.212,0.0102112110334316,0.2008480808387039,0.1655198610988305,5,True
+giroux2022,fewshot,fewshot_n5/draw4,lora5,"LoRA, 5 donors",lora,test_raw.npz@1339e763,0.4108526545856826,0.2049357081115794,0.24279747694617,0.6280870820074911,0.4544555324247401,0.8853326307359973,0.0019446705473705,0.7235487166892616,0.9373339327546504,0.967879577033796,0.4004936702082621,0.6109767549267705,0,1,0.0,0,0.0001968891514077,1,1,1,5,1,136,0.6983240223463687,38,1.3565087519851406,163,73,63,5,1,128,1.66333998669328,31,2.063265221187468,155,104,109,5,0.008,0.0083273479028558,0.04,0.0166546958057116,0.0396991514934391,0.0297639697068112,5,0.2,0.0051056055167158,0.206,0.0102112110334316,0.2144498512164462,0.1814095854828585,5,True
+giroux2022,fewshot,fewshot_n5/draw4,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@1339e763,0.4588092172343589,0.2896697993597995,0.2246045923497917,0.6280870820074911,0.4544555324247401,0.8853326307359973,0.0019446705473705,0.7235487166892616,0.9373339327546504,0.967879577033796,0.445658926069952,0.6109767549267705,0,1,0.0,0,0.0001968891514077,1,7,1,5,3,136,1.8938138071048936,38,1.3565087519851406,163,108,63,5,3,128,5.890234698705622,31,2.063265221187468,155,65,109,5,0.044,0.0287973805761698,0.062,0.0575947611523397,0.0386492511362739,0.0627536027981635,5,0.2,0.0051056055167158,0.206,0.0102112110334316,0.2144498512164462,0.1814095854828585,5,True
+imperial_eskd,fewshot,fewshot_n5/draw0,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@f0a2b659,0.6562152314847065,0.4826280345076109,0.4509332210720969,0.6675205927010471,0.368618627643667,0.9257836114144654,0.0010904000205106,0.7544730707051464,0.9606212325985124,0.9799918389725027,0.646476532147884,0.6558639559060271,112,250,2.7999952438911504,71,2.27575082667296,3013,4684,2247,5,95,250,2.7999952438911504,58,2.27575082667296,6222,9818,2098,5,113,250,9.649807532465534,62,5.749837134444332,3056,3624,1802,5,0.124,0.0055999904877823,0.1959999999999999,0.0111999809755646,0.215080902619711,0.1902290295236059,5,0.144,0.0045515016533459,0.224,0.0091030033066918,0.1454965715266321,0.150250203402029,5,True
+imperial_eskd,fewshot,fewshot_n5/draw0,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@df955ec1,0.694060243543139,0.3748892364222127,0.3959806975648627,0.792215570664516,0.675687881212453,0.9257836114144654,0.0010904000205106,0.7544730707051464,0.9606212325985124,0.9799918389725027,0.6828560609648923,0.778976284432108,103,250,3.030556712080481,112,2.236039806904968,3013,2356,1985,5,92,250,3.030556712080481,80,2.236039806904968,6222,5359,1087,5,94,250,13.087281351591296,89,5.557563885595712,3056,1920,901,5,0.224,0.0060611134241609,0.262,0.0121222268483219,0.2519171498381553,0.2342079352077513,5,0.344,0.0044720796138099,0.344,0.0089441592276198,0.4420774180355774,0.354643885849094,5,True
+imperial_eskd,fewshot,fewshot_n5/draw0,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@eacdb3b9,0.7024318575486699,0.4013265310917186,0.4401212307135924,0.7087110792793414,0.4678505243159248,0.9257836114144654,0.0010904000205106,0.7544730707051464,0.9606212325985124,0.9799918389725027,0.6911723120881537,0.6963474938554141,104,250,2.999133511499502,86,2.27575082667296,3013,3324,2201,5,103,250,2.999133511499502,63,2.27575082667296,6222,6344,2044,5,112,250,12.652105524445314,66,5.737430482358313,3056,2699,1741,5,0.148,0.005998267022999,0.2319999999999999,0.011996534045998,0.226941649908294,0.1820635229215555,5,0.1599999999999999,0.0045515016533459,0.2299999999999999,0.0091030033066918,0.1799245608565544,0.1608326282777339,5,True
+imperial_eskd,fewshot,fewshot_n5/draw0,lora5,"LoRA, 5 donors",lora,test_raw.npz@73567205,0.7798976158583719,0.6058538468404681,0.6572469324283057,0.6675205927010471,0.368618627643667,0.9257836114144654,0.0010904000205106,0.7544730707051464,0.9606212325985124,0.9799918389725027,0.7670832051044092,0.6558639559060271,116,250,3.059903711220137,71,2.27575082667296,3013,4585,2247,5,114,250,3.059903711220137,58,2.27575082667296,6222,7335,2098,5,126,250,9.842769284693338,62,5.749837134444332,3056,3035,1802,5,0.204,0.0061198074224402,0.28,0.0122396148448805,0.2360773945926905,0.2380040985733513,5,0.144,0.0045515016533459,0.224,0.0091030033066918,0.1454965715266321,0.150250203402029,5,True
+imperial_eskd,fewshot,fewshot_n5/draw0,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@73567205,0.5272168904193496,0.3832670032378059,0.437155768110488,0.6675205927010471,0.368618627643667,0.9257836114144654,0.0010904000205106,0.7544730707051464,0.9606212325985124,0.9799918389725027,0.5201407509582802,0.6558639559060271,41,250,5.714197666139306,71,2.27575082667296,3013,4326,2247,5,35,250,5.714197666139306,58,2.27575082667296,6222,8547,2098,5,40,250,37.55835571159216,62,5.749837134444332,3056,1404,1802,5,0.092,0.0114283953322786,0.1,0.0228567906645572,0.1398175399782457,0.1254887299045989,5,0.144,0.0045515016533459,0.224,0.0091030033066918,0.1454965715266321,0.150250203402029,5,True
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@f0a2b659,0.6356760155549507,0.4487142533387655,0.4157441530673024,0.6611787175621116,0.362695232587028,0.8862675180769447,0.0012876207452377,0.6933815333423627,0.9380609842223774,0.9682829390377056,0.6283069661702393,0.6478361601353952,106,250,2.800841258706046,86,2.272032322200808,1970,3986,1949,5,99,250,2.800841258706046,70,2.272032322200808,2423,8974,1811,5,108,250,9.16056655070958,73,5.763193809764751,2790,3300,1585,5,0.124,0.005601682517412,0.178,0.0112033650348241,0.2127688657430186,0.1808160943231726,5,0.188,0.0045440646444016,0.2179999999999999,0.0090881292888032,0.1928415162400228,0.1611415196045327,5,True
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@df955ec1,0.669001921013198,0.3465629882452757,0.3703732438889519,0.7756571349776418,0.6471214340747303,0.8862675180769447,0.0012876207452377,0.6933815333423627,0.9380609842223774,0.9682829390377056,0.6563842218459597,0.762093551341111,102,250,3.028334915991189,107,2.2330013395839585,1970,1945,1616,5,93,250,3.028334915991189,78,2.2330013395839585,2423,3646,759,5,92,250,13.928454137126526,80,5.570952806319716,2790,1716,697,5,0.192,0.0060566698319823,0.2399999999999999,0.0121133396639647,0.2496972116926516,0.214638405777187,5,0.3399999999999999,0.0044660026791679,0.3319999999999999,0.0089320053583358,0.4597233510112591,0.3512484971057745,5,True
+imperial_eskd,fewshot,fewshot_n5/draw1,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@5be18c1d,0.6607779089412783,0.3557890801683363,0.384560846852611,0.6936000845170623,0.4708124418350974,0.8862675180769447,0.0012876207452377,0.6933815333423627,0.9380609842223774,0.9682829390377056,0.6487048877974608,0.6800240660259294,104,250,2.9998452337955297,101,2.272032322200808,1970,3081,1951,5,98,250,2.9998452337955297,73,2.272032322200808,2423,5656,1769,5,97,250,12.500839083527332,79,5.757726941165287,2790,2613,1528,5,0.152,0.005999690467591,0.194,0.0119993809351821,0.2314169679342043,0.1801528061302901,5,0.208,0.0045440646444016,0.2239999999999999,0.0090881292888032,0.2542228749190729,0.1992445686819727,5,True
+imperial_eskd,fewshot,fewshot_n5/draw1,lora5,"LoRA, 5 donors",lora,test_raw.npz@c2293bb9,0.7570901930571807,0.5672926951521128,0.6045509566158934,0.6611787175621116,0.362695232587028,0.8862675180769447,0.0012876207452377,0.6933815333423627,0.9380609842223774,0.9682829390377056,0.7466939219715294,0.6478361601353952,119,250,3.103040097384046,86,2.272032322200808,1970,3004,1949,5,114,250,3.103040097384046,70,2.272032322200808,2423,3055,1811,5,115,250,9.79233618598184,73,5.763193809764751,2790,2210,1585,5,0.108,0.006206080194768,0.244,0.0124121603895361,0.3388352491175058,0.2522111542276202,5,0.188,0.0045440646444016,0.2179999999999999,0.0090881292888032,0.1928415162400228,0.1611415196045327,5,True
+imperial_eskd,fewshot,fewshot_n5/draw1,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@c2293bb9,0.5327834847462688,0.3943711570242271,0.4320356230622988,0.6611787175621116,0.362695232587028,0.8862675180769447,0.0012876207452377,0.6933815333423627,0.9380609842223774,0.9682829390377056,0.5313479321672887,0.6478361601353952,32,250,5.032070572492121,86,2.272032322200808,1970,5245,1949,5,37,250,5.032070572492121,70,2.272032322200808,2423,9257,1811,5,37,250,35.06288686945024,73,5.763193809764751,2790,1406,1585,5,0.044,0.0100641411449842,0.066,0.0201282822899684,0.1022076212648157,0.0937931000554644,5,0.188,0.0045440646444016,0.2179999999999999,0.0090881292888032,0.1928415162400228,0.1611415196045327,5,True
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@f0a2b659,0.6353606812973676,0.4476900715769193,0.4321835821562259,0.6433613217171205,0.3608915450886033,0.8814001291127382,0.0018555694483643,0.6903180029733533,0.935274626808016,0.9668378796067384,0.6262848962100946,0.6296794753209507,97,250,2.796460629001692,65,2.2711045124444174,1703,3890,2026,5,86,250,2.796460629001692,56,2.2711045124444174,2758,8830,1809,5,103,250,8.9979647172064,56,5.680651702354793,2732,3073,1630,5,0.088,0.0055929212580033,0.146,0.0111858425160067,0.1967965121222303,0.16138432024764,5,0.136,0.0045422090248888,0.172,0.0090844180497776,0.1248684861187676,0.1330738262083956,5,True
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@df955ec1,0.6661284530133308,0.3482155383969302,0.3784310586146379,0.7565909728327256,0.6275913165896061,0.8814001291127382,0.0018555694483643,0.6903180029733533,0.935274626808016,0.9668378796067384,0.6520589800245592,0.7423804986481907,93,250,3.033732520079085,103,2.232105335754297,1703,1887,1316,5,85,250,3.033732520079085,74,2.232105335754297,2758,5023,587,5,84,250,12.659123309416644,71,5.4909824961935625,2732,1639,674,5,0.188,0.0060674650401581,0.234,0.0121349300803163,0.2298872547520122,0.2150444199380929,5,0.3359999999999999,0.0044642106715085,0.344,0.0089284213430171,0.4005201182268688,0.330036525565205,5,True
+imperial_eskd,fewshot,fewshot_n5/draw2,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@96eda824,0.6695480865844681,0.3824212909728353,0.4172725807438323,0.6833474514827617,0.4528151307459033,0.8814001291127382,0.0018555694483643,0.6903180029733533,0.935274626808016,0.9668378796067384,0.6556711682003702,0.6690504706602854,96,250,3.009123655906176,80,2.2711045124444174,1703,3095,1940,5,85,250,3.009123655906176,57,2.2711045124444174,2758,5521,1786,5,92,250,12.79276902733484,57,5.662541252678123,2732,2474,1561,5,0.132,0.0060182473118123,0.198,0.0120364946236247,0.1998824210761382,0.174277292265568,5,0.1559999999999999,0.0045422090248888,0.1699999999999999,0.0090844180497776,0.1658294607839429,0.1527550674748699,5,True
+imperial_eskd,fewshot,fewshot_n5/draw2,lora5,"LoRA, 5 donors",lora,test_raw.npz@11ba7c4e,0.7139546009415169,0.5266587951057378,0.5764372157359006,0.6433613217171205,0.3608915450886033,0.8814001291127382,0.0018555694483643,0.6903180029733533,0.935274626808016,0.9668378796067384,0.701997794045564,0.6296794753209507,103,250,3.0798397007948206,65,2.2711045124444174,1703,2880,2026,5,89,250,3.0798397007948206,56,2.2711045124444174,2758,6828,1809,5,100,250,10.23118001515168,56,5.680651702354793,2732,1979,1630,5,0.128,0.0061596794015896,0.238,0.0123193588031792,0.284737561502061,0.2249991275637394,5,0.136,0.0045422090248888,0.172,0.0090844180497776,0.1248684861187676,0.1330738262083956,5,True
+imperial_eskd,fewshot,fewshot_n5/draw2,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@11ba7c4e,0.5623860563967511,0.3878956097042396,0.4309613438328892,0.6433613217171205,0.3608915450886033,0.8814001291127382,0.0018555694483643,0.6903180029733533,0.935274626808016,0.9668378796067384,0.5580163861328865,0.6296794753209507,40,250,5.229417453116198,65,2.2711045124444174,1703,3188,2026,5,26,250,4.511978159517963,56,2.2711045124444174,2758,2745,1809,5,27,250,32.348270058287945,56,5.680651702354793,2732,610,1630,5,0.124,0.0104588349062323,0.134,0.0209176698124647,0.1596295867087955,0.1214543293566054,5,0.136,0.0045422090248888,0.172,0.0090844180497776,0.1248684861187676,0.1330738262083956,5,True
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@f0a2b659,0.6263448079907197,0.4466874034213724,0.4093453887392256,0.6538959233815048,0.3400012784717775,0.8854442940149607,0.0032600109847487,0.6928644358625842,0.9378069683558478,0.9681862440679374,0.6190086061208441,0.6407730734380533,107,250,2.797491549628208,76,2.27046972861356,1951,4301,2000,5,80,250,2.797491549628208,52,2.27046972861356,5751,9457,1860,5,97,250,9.19807174664736,64,5.696665846513357,2739,3497,1604,5,0.096,0.0055949830992564,0.166,0.0111899661985128,0.1701072922653443,0.1620610111597287,5,0.132,0.0045409394572271,0.194,0.0090818789144542,0.1577739311377763,0.1441301622947529,5,True
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@df955ec1,0.6600322052034482,0.3181769672543342,0.358127831861626,0.7682869988004754,0.6427879750531248,0.8854442940149607,0.0032600109847487,0.6928644358625842,0.9378069683558478,0.9681862440679374,0.6476867953332801,0.7552819687724203,99,250,3.020533064550284,109,2.231647652256495,1951,2019,1819,5,80,250,3.020533064550284,73,2.231647652256495,5751,5199,846,5,86,250,13.627855153346315,74,5.503392112491479,2739,1664,669,5,0.152,0.0060410661291005,0.236,0.0120821322582011,0.2092198206671423,0.2069000206296401,5,0.308,0.0044632953045129,0.316,0.0089265906090259,0.4138382230800733,0.3280531841306754,5,True
+imperial_eskd,fewshot,fewshot_n5/draw3,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@40362513,0.6559303794074177,0.322860275155296,0.3832229224125232,0.6871952944616568,0.4482320669506027,0.8854442940149607,0.0032600109847487,0.6928644358625842,0.9378069683558478,0.9681862440679374,0.6449498467317288,0.6736674213444316,104,250,3.04569938751306,91,2.27046972861356,1951,3124,1964,5,79,250,2.946773440650425,57,2.27046972861356,5751,5770,1765,5,92,250,13.655275476564071,71,5.700593366393079,2739,2462,1504,5,0.156,0.0060913987750261,0.212,0.0121827975500522,0.1956641061431358,0.1751389057053875,5,0.1679999999999999,0.0045409394572271,0.208,0.0090818789144542,0.1971927716675061,0.1713057693809767,5,True
+imperial_eskd,fewshot,fewshot_n5/draw3,lora5,"LoRA, 5 donors",lora,test_raw.npz@1bb5ea46,0.7455905986374256,0.5422123163745884,0.6007400715066787,0.6538959233815048,0.3400012784717775,0.8854442940149607,0.0032600109847487,0.6928644358625842,0.9378069683558478,0.9681862440679374,0.735590670993942,0.6407730734380533,117,250,3.063719428958561,76,2.27046972861356,1951,1889,2000,5,90,250,3.063719428958561,52,2.27046972861356,5751,4527,1860,5,108,250,10.680543271692551,64,5.696665846513357,2739,1492,1604,5,0.2759999999999999,0.0061274388579171,0.326,0.0122548777158342,0.3252616264632137,0.2660172893403464,5,0.132,0.0045409394572271,0.194,0.0090818789144542,0.1577739311377763,0.1441301622947529,5,True
+imperial_eskd,fewshot,fewshot_n5/draw3,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@1bb5ea46,0.5914775900543578,0.3721417136819536,0.4585372662967641,0.6538959233815048,0.3400012784717775,0.8854442940149607,0.0032600109847487,0.6928644358625842,0.9378069683558478,0.9681862440679374,0.5819482541816091,0.6407730734380533,60,250,7.115147668190335,76,2.27046972861356,1951,1912,2000,5,32,250,6.025138910093254,52,2.27046972861356,5751,3338,1860,5,54,250,45.31382346144785,64,5.696665846513357,2739,667,1604,5,0.124,0.0142302953363806,0.1619999999999999,0.0284605906727613,0.1675940880079894,0.1677563970618734,5,0.132,0.0045409394572271,0.194,0.0090818789144542,0.1577739311377763,0.1441301622947529,5,True
+imperial_eskd,fewshot,fewshot_n5/draw4,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@f0a2b659,0.6360357252245608,0.4640404358901273,0.4187812300545399,0.6565426449733607,0.3680874793505088,0.8855414946003435,0.0020284381489227,0.7066720786796614,0.9374963598168538,0.9679675503399362,0.6283203819053206,0.6430599838440776,106,250,2.799459681199035,76,2.2729702611677967,2535,4569,2055,5,89,250,2.799459681199035,62,2.2729702611677967,4419,9678,1898,5,103,250,9.08216379462736,65,5.6068956180673055,2946,3482,1644,5,0.104,0.005598919362398,0.154,0.0111978387247961,0.1875804532207817,0.1712933866373123,5,0.196,0.0045459405223355,0.236,0.0090918810446711,0.1856330245238844,0.1778304384400759,5,True
+imperial_eskd,fewshot,fewshot_n5/draw4,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@df955ec1,0.679204824918958,0.3721357136726244,0.3765233621635744,0.7700277778206431,0.6525490066991577,0.8855414946003435,0.0020284381489227,0.7066720786796614,0.9374963598168538,0.9679675503399362,0.6664392932228766,0.7564968317783797,96,250,3.019582650512043,111,2.234146523417404,2535,2152,1887,5,85,250,3.019582650512043,83,2.234146523417404,4419,5164,990,5,89,250,12.576935907424428,86,5.417430410388218,2946,1827,783,5,0.18,0.006039165301024,0.246,0.0120783306020481,0.2276934645926039,0.2185226149639902,5,0.3399999999999999,0.0044682930468348,0.362,0.0089365860936696,0.4295786410532396,0.3629436102958021,5,True
+imperial_eskd,fewshot,fewshot_n5/draw4,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@54c29b0c,0.6913143741089167,0.4106228006196274,0.4125465066651345,0.6995847348700629,0.4648917081416439,0.8855414946003435,0.0020284381489227,0.7066720786796614,0.9374963598168538,0.9679675503399362,0.6790482039875911,0.6856644717315514,111,250,2.9771931451016207,96,2.2729702611677967,2535,3767,2030,5,96,250,2.9771931451016207,69,2.2729702611677967,4419,8060,1902,5,105,250,12.28085784778758,68,5.606743541796142,2946,2854,1578,5,0.184,0.0059543862902032,0.224,0.0119087725804064,0.2371774170669912,0.2050384215531357,5,0.212,0.0045459405223355,0.2279999999999999,0.0090918810446711,0.2368101456752092,0.200609785493695,5,True
+imperial_eskd,fewshot,fewshot_n5/draw4,lora5,"LoRA, 5 donors",lora,test_raw.npz@55970c18,0.7492433446082651,0.506714487236052,0.575230848198632,0.6565426449733607,0.3680874793505088,0.8855414946003435,0.0020284381489227,0.7066720786796614,0.9374963598168538,0.9679675503399362,0.7366777929643822,0.6430599838440776,113,250,3.019659432144148,76,2.2729702611677967,2535,2455,2055,5,103,250,3.019659432144148,62,2.2729702611677967,4419,7248,1898,5,113,250,9.999199937887198,65,5.6068956180673055,2946,1851,1644,5,0.156,0.0060393188642882,0.194,0.0120786377285765,0.2367023576102217,0.1975029386699527,5,0.196,0.0045459405223355,0.236,0.0090918810446711,0.1856330245238844,0.1778304384400759,5,True
+imperial_eskd,fewshot,fewshot_n5/draw4,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@55970c18,0.5963964231394581,0.3265204797992475,0.3959069873917312,0.6565426449733607,0.3680874793505088,0.8855414946003435,0.0020284381489227,0.7066720786796614,0.9374963598168538,0.9679675503399362,0.5852820437966447,0.6430599838440776,61,250,7.020093319954814,76,2.2729702611677967,2535,1162,2055,5,46,250,6.1246571558878005,62,2.2729702611677967,4419,1248,1898,5,50,250,43.58176474216032,65,5.6068956180673055,2946,633,1644,5,0.204,0.0140401866399096,0.176,0.0280803732798192,0.242218560686477,0.1700186379236219,5,0.196,0.0045459405223355,0.236,0.0090918810446711,0.1856330245238844,0.1778304384400759,5,True
+ji2025_chili,fewshot,fewshot_n5/draw0,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@78d8ac58,0.1025191946937001,0.0905826340612578,0.0606960898763134,0.2131186141133866,0.1283985723111984,0.8637970625882474,0.002573154905189,0.7464905934101889,0.9229385610082796,0.960042843221488,0.1022129964629858,0.2091147779670266,0,125,0.0086621751684311,0,0.0939035567098322,2214,3,4,5,0,204,0.4082557036718402,1,0.2715198959152765,655,31,7,5,0,233,1.851765408351675,1,0.9332834681074508,778,51,7,5,0.004,0.0080746219954045,0.012,0.0161492439908091,0.0154805448828122,0.0172141970741139,5,0.004,0.0047774686662861,0.038,0.0095549373325722,0.0559586788530702,0.0352736255479941,5,True
+ji2025_chili,fewshot,fewshot_n5/draw0,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@49033eab,0.1840352599240339,0.1821970966808274,0.0399001937098861,0.6482949200986768,0.5641620959602385,0.8637970625882474,0.002573154905189,0.7464905934101889,0.9229385610082796,0.960042843221488,0.1810181846378376,0.6269338222690107,0,125,0.0591104505044153,18,1.1330037347526778,2214,12,858,5,0,204,0.4285156752120458,25,1.8766795674303016,655,35,171,5,0,233,2.6329756160284483,73,6.283597380491289,778,87,186,5,0.004,0.0068783258134659,0.01,0.0137566516269318,0.0154808726331706,0.0120395799837493,5,0.372,0.0046260588123411,0.384,0.0092521176246823,0.1313097229972201,0.2472161185203023,5,True
+ji2025_chili,fewshot,fewshot_n5/draw0,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@7141bb69,0.1135658033855868,0.1033091793219145,0.105821090503313,0.1164107089818776,0.0509733264613678,0.8637970625882474,0.002573154905189,0.7464905934101889,0.9229385610082796,0.960042843221488,0.1122756010078943,0.1154911964132876,0,125,0.0,0,0.023475889177458,2214,0,1,5,0,204,0.0,1,0.1551542262373008,655,0,4,5,0,233,0.0,1,0.391278737151423,778,0,3,5,0.0,0.0078844918205849,0.014,0.0157689836411699,0.0254097766230484,0.0181537444595108,5,0.0,0.0047774686662861,0.0279999999999999,0.0095549373325722,0.0530974196999099,0.033510156985162,5,True
+ji2025_chili,fewshot,fewshot_n5/draw0,lora5,"LoRA, 5 donors",lora,test_raw.npz@ca5da7eb,0.3869798572689973,0.358689213530799,0.3658890310653112,0.2131186141133866,0.1283985723111984,0.8637970625882474,0.002573154905189,0.7464905934101889,0.9229385610082796,0.960042843221488,0.3782852570907627,0.2091147779670266,0,125,0.0511715593859412,0,0.0939035567098322,2214,19,4,5,6,204,1.753710872195407,1,0.2715198959152765,655,1242,7,5,6,233,3.58991958458336,1,0.9332834681074508,778,113,7,5,0.044,0.0072057632184352,0.0699999999999999,0.0144115264368705,0.0258660601952255,0.058117507796358,5,0.004,0.0047774686662861,0.038,0.0095549373325722,0.0559586788530702,0.0352736255479941,5,True
+ji2025_chili,fewshot,fewshot_n5/draw0,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@ca5da7eb,0.0431529810490292,0.0334002472813699,-0.0220970547412255,0.2131186141133866,0.1283985723111984,0.8637970625882474,0.002573154905189,0.7464905934101889,0.9229385610082796,0.960042843221488,0.0437091979325644,0.2091147779670266,0,125,0.0,0,0.0939035567098322,2214,0,4,5,0,204,0.0,1,0.2715198959152765,655,0,7,5,0,233,2.366863905325444,1,0.9332834681074508,778,8,7,5,0.028,0.0228775899250943,0.04,0.0457551798501886,0.0112912081258211,0.050131151242024,5,0.004,0.0047774686662861,0.038,0.0095549373325722,0.0559586788530702,0.0352736255479941,5,True
+ji2025_chili,fewshot,fewshot_n5/draw1,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@78d8ac58,0.0369589741633173,0.0285326680970337,-0.0024598880710682,0.2079198475538274,0.100049126968919,0.8839875692912933,0.0028746676726594,0.7765443349108496,0.9362123886704332,0.9672438742086434,0.0370474557100814,0.2032396077621557,0,243,0.0275641025641025,0,0.0,2492,2,0,5,0,250,0.0678928609426534,3,0.2841949123676822,1912,4,6,5,1,250,0.7967079480708918,2,0.5826289859302354,928,12,4,5,0.004,0.0080456258634477,0.006,0.0160912517268955,0.0111446582367839,0.0111875712957486,5,0.032,0.0047365818727947,0.05,0.0094731637455894,0.0559413613850434,0.0391561673016973,5,True
+ji2025_chili,fewshot,fewshot_n5/draw1,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@49033eab,0.145988628818085,0.1342115944154656,0.0426287863051475,0.5715523189410769,0.4826633241959282,0.8839875692912933,0.0028746676726594,0.7765443349108496,0.9362123886704332,0.9672438742086434,0.1420948121291085,0.5547941658857469,0,243,0.7857320750087755,28,2.22413216201536,2492,103,983,5,0,250,0.8120257271026883,39,2.289224220784189,1912,65,267,5,2,250,4.568814677570536,63,6.868845610762955,928,166,236,5,0.016,0.0068328068833182,0.026,0.0136656137666364,0.0265701056815818,0.0224065644442119,5,0.264,0.0045784484415683,0.3379999999999999,0.0091568968831367,0.171787666975603,0.2213186890153493,5,True
+ji2025_chili,fewshot,fewshot_n5/draw1,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@79890ab3,0.0536441443373392,0.0177424472136981,0.0259581955119008,0.1862695227970336,0.1105137589422213,0.8839875692912933,0.0028746676726594,0.7765443349108496,0.9362123886704332,0.9672438742086434,0.0536153199277115,0.1822769608113426,0,243,0.0,0,0.0920434654128833,2492,0,2,5,0,250,0.0,0,0.0,1912,0,0,5,0,250,0.0,0,0.0,928,0,0,5,0.012,0.0076713827483743,0.022,0.0153427654967486,0.0242643917566878,0.0214371874008792,5,0.036,0.0047365818727947,0.046,0.0094731637455894,0.0542422259809727,0.0382025556242878,5,True
+ji2025_chili,fewshot,fewshot_n5/draw1,lora5,"LoRA, 5 donors",lora,test_raw.npz@0c873c5d,0.2756848006169793,0.2088340644701692,0.2420147625491504,0.2079198475538274,0.100049126968919,0.8839875692912933,0.0028746676726594,0.7765443349108496,0.9362123886704332,0.9672438742086434,0.2709210291634057,0.2032396077621557,1,243,0.0514668039114771,0,0.0,2492,4,0,5,3,250,0.9600184089399814,3,0.2841949123676822,1912,496,6,5,6,250,0.5105105105105106,2,0.5826289859302354,928,17,4,5,0.06,0.0068896272249369,0.078,0.0137792544498738,0.0625700044051989,0.0710683158079702,5,0.032,0.0047365818727947,0.05,0.0094731637455894,0.0559413613850434,0.0391561673016973,5,True
+ji2025_chili,fewshot,fewshot_n5/draw1,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@0c873c5d,0.1801656001049191,0.0651955397501148,0.1405787363257615,0.2079198475538274,0.100049126968919,0.8839875692912933,0.0028746676726594,0.7765443349108496,0.9362123886704332,0.9672438742086434,0.1757331301925576,0.2032396077621557,0,243,0.0,0,0.0,2492,0,0,5,0,250,0.0,3,0.2841949123676822,1912,0,6,5,1,250,4.891304347826087,2,0.5826289859302354,928,18,4,5,0.012,0.0221908477447768,0.014,0.0443816954895536,0.0203798148474487,0.0602235809819766,5,0.032,0.0047365818727947,0.05,0.0094731637455894,0.0559413613850434,0.0391561673016973,5,True
+ji2025_chili,fewshot,fewshot_n5/draw2,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@78d8ac58,0.1361440859270941,0.1201457095989003,0.0792074125381482,0.263723888008903,0.1417076604986424,0.8819545269091502,0.0025814526299489,0.7653708591901631,0.9346860101107088,0.9663963551990096,0.1334993315473908,0.2571894046028982,0,250,0.1397199664163237,5,1.1396182091058642,2865,12,24,5,0,250,1.0115901743679427,11,1.6144591295666406,1285,600,34,5,1,250,1.8077906314097985,10,4.97244811536458,1153,49,31,5,0.004,0.0080655839234947,0.03,0.0161311678469894,0.0111419219946047,0.0260235567541486,5,0.036,0.0047484092046077,0.052,0.0094968184092155,0.0482824926707939,0.0420485157947418,5,True
+ji2025_chili,fewshot,fewshot_n5/draw2,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@49033eab,0.1998711087863972,0.1839333943384142,0.067248347823336,0.6608659162121641,0.5697283738234933,0.8819545269091502,0.0025814526299489,0.7653708591901631,0.9346860101107088,0.9663963551990096,0.1942563401427537,0.6423096029404333,4,250,1.4954471606685578,43,2.303857200461055,2865,326,1311,5,2,250,1.2766563472480756,34,2.303857200461055,1285,793,248,5,5,250,6.014985024863225,80,7.602088076514363,1153,532,246,5,0.016,0.0068255995293699,0.034,0.0136511990587398,0.0303790141153466,0.0287282938617861,5,0.384,0.0046077144009221,0.376,0.0092154288018442,0.1698963845731213,0.2943683455007018,5,True
+ji2025_chili,fewshot,fewshot_n5/draw2,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@16df3337,0.2305548630473463,0.2158638710966689,0.2113030545009523,0.213125084151566,0.1286605496033646,0.8819545269091502,0.0025814526299489,0.7653708591901631,0.9346860101107088,0.9663963551990096,0.2275392498563457,0.2084396067206339,0,250,0.0,2,0.284904552276466,2865,0,6,5,0,250,0.0316055625790139,7,1.3770386693362524,1285,2,29,5,0,250,0.1237623762376237,3,2.985094635506455,1153,2,19,5,0.008,0.0078980122215518,0.024,0.0157960244431036,0.0095538763143587,0.0341876544941703,5,0.036,0.0047484092046077,0.052,0.0094968184092155,0.0501117632919109,0.0425832933059102,5,True
+ji2025_chili,fewshot,fewshot_n5/draw2,lora5,"LoRA, 5 donors",lora,test_raw.npz@70953ef3,0.2893810162069429,0.246724892097214,0.2480391724799274,0.263723888008903,0.1417076604986424,0.8819545269091502,0.0025814526299489,0.7653708591901631,0.9346860101107088,0.9663963551990096,0.2834767594619148,0.2571894046028982,0,250,0.1119281398898091,5,1.1396182091058642,2865,7,24,5,1,250,1.639248706806381,11,1.6144591295666406,1285,1266,34,5,0,250,0.925238908685726,10,4.97244811536458,1153,23,31,5,0.036,0.0077948594091465,0.062,0.015589718818293,0.0276179040956103,0.0683345837077594,5,0.036,0.0047484092046077,0.052,0.0094968184092155,0.0482824926707939,0.0420485157947418,5,True
+ji2025_chili,fewshot,fewshot_n5/draw2,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@70953ef3,0.1815766461319373,0.1467725518785577,0.0972712819270106,0.263723888008903,0.1417076604986424,0.8819545269091502,0.0025814526299489,0.7653708591901631,0.9346860101107088,0.9663963551990096,0.1763419855039814,0.2571894046028982,0,250,0.0,5,1.1396182091058642,2865,0,24,5,0,250,3.461165268190662,11,1.6144591295666406,1285,343,34,5,0,250,3.677280335180354,10,4.97244811536458,1153,13,31,5,0.032,0.0329014139354512,0.058,0.0658028278709024,0.016262190935306,0.062436604750652,5,0.036,0.0047484092046077,0.052,0.0094968184092155,0.0482824926707939,0.0420485157947418,5,True
+ji2025_chili,fewshot,fewshot_n5/draw3,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@78d8ac58,0.1070763901192039,0.0994473731227575,0.049675430807275,0.2577780039471977,0.1230990188750553,0.8602565911839599,0.0042713234446655,0.7413916252200589,0.9219397477902403,0.959720616855537,0.1077554858580287,0.2488228568871646,0,75,0.0,0,0.0139474890855378,838,0,1,5,0,96,0.0293822048445867,2,0.1309837313083805,157,32,7,5,0,155,0.1239587518414356,2,0.2942160619604379,249,5,3,5,0.004,0.0081169049017093,0.022,0.0162338098034186,0.0139075988888713,0.0221449126510563,5,0.044,0.0047559286091096,0.05,0.0095118572182192,0.0425197992752187,0.0399988528539277,5,True
+ji2025_chili,fewshot,fewshot_n5/draw3,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@49033eab,0.1391311050440007,0.1326041807271114,0.0085086201414578,0.5832199310509878,0.5105452748422739,0.8602565911839599,0.0042713234446655,0.7413916252200589,0.9219397477902403,0.959720616855537,0.1370942231658368,0.5645414466949156,0,75,0.0119246362985928,6,0.6739276595890916,838,4,662,5,0,96,0.1045169528579378,11,0.911133211272763,157,49,95,5,0,155,0.6801663675252786,25,4.65894855833079,249,42,82,5,0.004,0.0068322012921433,0.016,0.0136644025842866,0.0179443232111643,0.0168650185512862,5,0.196,0.0046136369377218,0.252,0.0092272738754437,0.1147240119480316,0.1618881573062978,5,True
+ji2025_chili,fewshot,fewshot_n5/draw3,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@82faaec7,0.2316093410399525,0.2190446264196071,0.2013239378625468,0.237353594707931,0.1604829301178515,0.8602565911839599,0.0042713234446655,0.7413916252200589,0.9219397477902403,0.959720616855537,0.2261290681088312,0.2300067373843194,0,75,0.0119789171058936,0,0.0139474890855378,838,2,1,5,0,96,0.0225977422826585,1,0.1122717696928976,157,2,6,5,0,155,0.3745318352059925,0,0.096228537603627,249,2,1,5,0.04,0.0080564871803962,0.0679999999999999,0.0161129743607925,0.0194274270759896,0.0457163227211561,5,0.032,0.0047559286091096,0.056,0.0095118572182192,0.0433804476717038,0.0382029293064717,5,True
+ji2025_chili,fewshot,fewshot_n5/draw3,lora5,"LoRA, 5 donors",lora,test_raw.npz@3d69ce8b,0.4410983924408845,0.3594735921704742,0.3998221511001248,0.2577780039471977,0.1230990188750553,0.8602565911839599,0.0042713234446655,0.7413916252200589,0.9219397477902403,0.959720616855537,0.4277272396935352,0.2488228568871646,0,75,0.0042029420594416,0,0.0139474890855378,838,4,1,5,2,96,1.2806368168115725,2,0.1309837313083805,157,1266,7,5,7,155,2.7337675912727364,2,0.2942160619604379,249,247,3,5,0.064,0.0075018722935783,0.104,0.0150037445871567,0.0382434304834109,0.0861412511220216,5,0.044,0.0047559286091096,0.05,0.0095118572182192,0.0425197992752187,0.0399988528539277,5,True
+ji2025_chili,fewshot,fewshot_n5/draw3,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@3d69ce8b,0.2531340811205537,0.1896313096560862,0.1894163365126269,0.2577780039471977,0.1230990188750553,0.8602565911839599,0.0042713234446655,0.7413916252200589,0.9219397477902403,0.959720616855537,0.2448094132261479,0.2488228568871646,0,75,0.0,0,0.0139474890855378,838,0,1,5,0,96,0.1094091903719912,2,0.1309837313083805,157,1,7,5,0,155,0.0,2,0.2942160619604379,249,0,3,5,0.024,0.0326129826842826,0.038,0.0652259653685653,0.0203000009281285,0.0561790095014324,5,0.044,0.0047559286091096,0.05,0.0095118572182192,0.0425197992752187,0.0399988528539277,5,True
+ji2025_chili,fewshot,fewshot_n5/draw4,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@78d8ac58,0.0501849614517294,0.0453975310630556,0.0061772991208933,0.2254541110690231,0.1095310112143923,0.8857487763591154,0.0031816074028598,0.7552598949026994,0.9377248423279908,0.9681125450185776,0.0501197175150156,0.2187011128831878,0,189,0.0237310143439046,0,0.0722099685968749,789,2,2,5,0,250,0.9743304140535765,14,1.386348692918018,2969,577,29,5,0,250,0.6791588692997144,20,7.037680792456886,846,19,42,5,0.004,0.0081857249643749,0.016,0.0163714499287498,0.0112657628405694,0.0158712847926856,5,0.044,0.0047805127342,0.044,0.0095610254684001,0.0595470798156189,0.0580475057724138,5,True
+ji2025_chili,fewshot,fewshot_n5/draw4,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@49033eab,0.2160946745051027,0.1772416536344872,0.1117576424197373,0.570851787297695,0.4766556766671164,0.8857487763591154,0.0031816074028598,0.7552598949026994,0.9377248423279908,0.9681125450185776,0.2129671703600243,0.5523724064537678,4,189,1.3461123159366484,35,1.7442245564682426,789,370,498,5,7,250,2.361213026342255,39,2.309839259872052,2969,1550,338,5,16,250,11.282302508079756,55,7.850936090554099,846,882,290,5,0.0279999999999999,0.0068904183345148,0.04,0.0137808366690296,0.056708106235805,0.0552863617555638,5,0.092,0.0046196785197441,0.122,0.0092393570394882,0.152661727563419,0.1325074127766091,5,True
+ji2025_chili,fewshot,fewshot_n5/draw4,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@cdfdac00,0.0700340642539577,0.0466703419465769,0.0439273936450371,0.1911889963169352,0.0848381879155562,0.8857487763591154,0.0031816074028598,0.7552598949026994,0.9377248423279908,0.9681125450185776,0.0709369764116573,0.1867594371340387,0,189,0.0,1,0.2527348900890623,789,0,7,5,0,250,0.0310653647159028,12,1.2429333108920164,2969,2,26,5,0,250,0.0,15,3.872834103265513,846,0,24,5,0.008,0.0082964056528133,0.0139999999999999,0.0165928113056266,0.015956294201325,0.0192708709482185,5,0.04,0.0047805127342,0.05,0.0095610254684001,0.0585899331142397,0.056135433919427,5,True
+ji2025_chili,fewshot,fewshot_n5/draw4,lora5,"LoRA, 5 donors",lora,test_raw.npz@cc4771e4,0.2725492074488929,0.2586071842237595,0.2467295164617603,0.2254541110690231,0.1095310112143923,0.8857487763591154,0.0031816074028598,0.7552598949026994,0.9377248423279908,0.9681125450185776,0.2686176010316517,0.2187011128831878,0,189,0.0147318797878609,0,0.0722099685968749,789,1,2,5,3,250,1.4361994443842774,14,1.386348692918018,2969,531,29,5,5,250,1.6292887556033144,20,7.037680792456886,846,47,42,5,0.06,0.0076982672036877,0.052,0.0153965344073755,0.0708567774300986,0.0649124810466585,5,0.044,0.0047805127342,0.044,0.0095610254684001,0.0595470798156189,0.0580475057724138,5,True
+ji2025_chili,fewshot,fewshot_n5/draw4,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@cc4771e4,0.1056088500897695,0.026873645294237,0.0201209483843994,0.2254541110690231,0.1095310112143923,0.8857487763591154,0.0031816074028598,0.7552598949026994,0.9377248423279908,0.9681125450185776,0.1040982625210457,0.2187011128831878,0,189,0.1474926253687315,0,0.0722099685968749,789,2,2,5,3,250,2.5833479516259734,14,1.386348692918018,2969,425,29,5,0,250,2.2162485065710875,20,7.037680792456886,846,12,42,5,0.032,0.0216855220485638,0.044,0.0433710440971276,0.0637553647297706,0.046502365868517,5,0.044,0.0047805127342,0.044,0.0095610254684001,0.0595470798156189,0.0580475057724138,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw0,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@ffcc1562,-0.0276920390407129,-0.0660369646657854,-0.1068614717335805,0.3359901153517466,0.3421737766612631,0.957246962508742,0.0020262343662065,0.841487071143276,0.9780193575375756,0.9889305606360465,-0.024570977673604,0.3351402815011843,11,250,2.76022323833399,23,2.2455066702129742,7163,1990,1101,5,7,250,1.7771973037118989,36,2.2455066702129742,5067,2859,565,5,9,250,6.129011747051699,33,5.823604331820518,3122,1885,313,5,0.012,0.0059144796880386,0.02,0.0118289593760773,0.032782255876217,0.0286564908936328,5,0.04,0.0044910133404259,0.066,0.0089820266808518,0.0673479884545293,0.0685810702291717,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw0,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@32e455af,0.4691101856595802,0.3589612302979819,0.2098609250129904,0.7322765252677148,0.6665919066867054,0.957246962508742,0.0020262343662065,0.841487071143276,0.9780193575375756,0.9889305606360465,0.4642241570957791,0.7256651601131224,17,250,2.7588527723677148,63,2.2164352218342747,7163,1068,1701,5,23,250,2.2726494528656405,53,2.2164352218342747,5067,1846,808,5,19,250,7.81441499611278,53,5.82755091868246,3122,533,298,5,0.088,0.0063772194747887,0.108,0.0127544389495775,0.1504403765013949,0.1012342307925385,5,0.1119999999999999,0.0044328704436685,0.136,0.0088657408873371,0.140607633513742,0.1379314830688313,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw0,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@db50ff50,0.0666327831462594,0.1298707415099763,-0.0314306313316248,0.3178506698607316,0.318399858736358,0.957246962508742,0.0020262343662065,0.841487071143276,0.9780193575375756,0.9889305606360465,0.0686145030686548,0.3179476856320924,13,250,2.4047082870036727,25,2.2455066702129742,7163,991,1167,5,5,250,1.3782275795437475,36,2.2455066702129742,5067,1161,519,5,7,250,8.116215030541136,32,5.859372715604279,3122,454,287,5,0.048,0.0063852673205587,0.05,0.0127705346411174,0.0760618287761299,0.0616990981280822,5,0.048,0.0044910133404259,0.064,0.0089820266808518,0.0692846045734748,0.0681046515497003,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw0,lora5,"LoRA, 5 donors",lora,test_raw.npz@ae163d5e,0.4359905652333528,0.2421335601415939,0.4060106147529024,0.3359901153517466,0.3421737766612631,0.957246962508742,0.0020262343662065,0.841487071143276,0.9780193575375756,0.9889305606360465,0.4341166237024262,0.3351402815011843,7,250,1.6973523811470077,23,2.2455066702129742,7163,367,1101,5,12,250,1.732859697407605,36,2.2455066702129742,5067,1505,565,5,17,250,6.34010513967481,33,5.823604331820518,3122,618,313,5,0.04,0.0062066532976189,0.076,0.0124133065952378,0.1041875248750787,0.0787554360599649,5,0.04,0.0044910133404259,0.066,0.0089820266808518,0.0673479884545293,0.0685810702291717,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw0,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@ae163d5e,0.4126126928197416,0.0658066877128528,0.3535577693743281,0.3359901153517466,0.3421737766612631,0.957246962508742,0.0020262343662065,0.841487071143276,0.9780193575375756,0.9889305606360465,0.4088566170451108,0.3351402815011843,0,250,3.395228277000556,23,2.2455066702129742,7163,52,1101,5,7,250,9.146893800020628,36,2.2455066702129742,5067,3187,565,5,4,250,54.27765417853685,33,5.823604331820518,3122,245,313,5,0.0279999999999999,0.0212259806360827,0.044,0.0424519612721655,0.0571648344737574,0.0428180637824731,5,0.04,0.0044910133404259,0.066,0.0089820266808518,0.0673479884545293,0.0685810702291717,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw1,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@ffcc1562,-0.0466189361131835,-0.075685591724976,-0.1192142244972621,0.2794143623808983,0.312919430221676,0.9572477318073214,0.0018091238364772,0.8397638890711828,0.978008238095296,0.9889233910825288,-0.0424851730385891,0.2791006338584249,12,250,2.96231326374579,20,2.245351202658152,7639,2590,1208,5,11,250,2.270222868265564,30,2.245351202658152,5588,3515,696,5,11,250,6.137449530560967,33,6.215060441990612,3300,2241,418,5,0.008,0.0059246265274915,0.022,0.0118492530549831,0.0267013753975915,0.0266247665326939,5,0.0399999999999999,0.0044907024053163,0.064,0.0089814048106326,0.0670162119672738,0.0688161105252299,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw1,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@32e455af,0.4792066975775281,0.3593619062918528,0.213278101921649,0.7303600884082795,0.6580981156094111,0.9572477318073214,0.0018091238364772,0.8397638890711828,0.978008238095296,0.9889233910825288,0.4742624677015734,0.7236260859635094,20,250,2.889552959772369,60,2.2165021062750294,7639,1177,1589,5,21,250,2.2876963634753134,50,2.2165021062750294,5588,1948,943,5,22,250,9.780473768394147,53,6.211110641184355,3300,567,369,5,0.084,0.0063743440147828,0.086,0.0127486880295656,0.1545071947718402,0.1043847811445391,5,0.1,0.00443300421255,0.126,0.0088660084251001,0.1568669729539413,0.1390421132753256,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw1,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@a1ed0d04,0.084851996040844,0.0985732006308305,-0.0036656192248166,0.2888488446306383,0.4157020196189361,0.9572477318073214,0.0018091238364772,0.8397638890711828,0.978008238095296,0.9889233910825288,0.0879533290991506,0.288811239213148,10,250,2.97941642300907,31,2.245351202658152,7639,1554,3284,5,19,250,2.9652841448858367,31,2.245351202658152,5588,2969,845,5,25,250,15.11339050297041,27,6.266374140097781,3300,1050,372,5,0.024,0.0061849492959898,0.05,0.0123698985919797,0.0772208171991644,0.0652557470654399,5,0.0399999999999999,0.0044907024053163,0.072,0.0089814048106326,0.0617933221863838,0.0681996049621048,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw1,lora5,"LoRA, 5 donors",lora,test_raw.npz@d5ec3390,0.0812370339175413,0.0747175730270279,-0.0189356796136925,0.2794143623808983,0.312919430221676,0.9572477318073214,0.0018091238364772,0.8397638890711828,0.978008238095296,0.9889233910825288,0.0832827506827324,0.2791006338584249,16,250,3.0590174682523767,20,2.245351202658152,7639,1927,1208,5,22,250,2.603127867463811,30,2.245351202658152,5588,6209,696,5,28,250,16.258916665092965,33,6.215060441990612,3300,1280,418,5,0.048,0.0061180349365047,0.058,0.0122360698730095,0.0882721552949271,0.0618993905358047,5,0.0399999999999999,0.0044907024053163,0.064,0.0089814048106326,0.0670162119672738,0.0688161105252299,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw1,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@d5ec3390,0.330440399769891,0.1609500764573236,0.2202324653355928,0.2794143623808983,0.312919430221676,0.9572477318073214,0.0018091238364772,0.8397638890711828,0.978008238095296,0.9889233910825288,0.327582557221977,0.2791006338584249,2,250,5.189321352774522,20,2.245351202658152,7639,289,1208,5,13,250,6.830529874524329,30,2.245351202658152,5588,4715,696,5,8,250,45.7598622506423,33,6.215060441990612,3300,401,418,5,0.004,0.0138730738833242,0.026,0.0277461477666485,0.027325370221133,0.0221499945626422,5,0.0399999999999999,0.0044907024053163,0.064,0.0089814048106326,0.0670162119672738,0.0688161105252299,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw2,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@ffcc1562,0.0051165619869394,-0.0328982188536457,-0.0827375958686483,0.3386821732452143,0.3501254222844883,0.9609285298153744,0.0018336035889258,0.8393755597740762,0.9799700095896768,0.9899206005587547,0.0082982613587554,0.3380276272464347,10,250,2.930906584952953,18,2.2438976662663683,7438,2601,1469,5,8,250,2.295672254066448,35,2.2438976662663683,5680,3567,890,5,9,250,6.106351564327953,31,5.820233101906957,3363,2283,560,5,0.008,0.0059182784437624,0.032,0.0118365568875249,0.0401510223317991,0.0338315715803772,5,0.056,0.0044877953325327,0.078,0.0089755906650654,0.0683757799174688,0.0758698505956715,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw2,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@32e455af,0.489737657274666,0.368419456051662,0.2306112495979637,0.7289758644085618,0.6526580481377906,0.9609285298153744,0.0018336035889258,0.8393755597740762,0.9799700095896768,0.9899206005587547,0.4850856718493317,0.7226956189067579,23,250,3.1845473304530936,67,2.2146947411965288,7438,1315,1764,5,33,250,3.1845473304530936,47,2.2146947411965288,5680,2986,787,5,24,250,8.902952078295488,50,5.823457985356518,3363,791,363,5,0.1,0.0063690946609061,0.1219999999999999,0.0127381893218123,0.1630404603807204,0.1106869725363239,5,0.096,0.004429389482393,0.148,0.0088587789647861,0.1649739760627631,0.146607255156005,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw2,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@dfe7e01b,0.1698097377043126,0.1551847852425827,0.0761847323005933,0.3326480144206523,0.37653959705274,0.9609285298153744,0.0018336035889258,0.8393755597740762,0.9799700095896768,0.9899206005587547,0.1714903226690187,0.3327904127864499,10,250,2.084073084998624,29,2.2438976662663683,7438,1065,2047,5,10,250,1.867487263817848,37,2.2438976662663683,5680,655,944,5,12,250,7.124322327347977,28,5.847526811553892,3363,691,474,5,0.092,0.0061997438042619,0.0819999999999999,0.0123994876085239,0.1496887974932745,0.0969087413651015,5,0.052,0.0044877953325327,0.0799999999999999,0.0089755906650654,0.0647054040258946,0.0737330024778844,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw2,lora5,"LoRA, 5 donors",lora,test_raw.npz@a7f4df1f,0.3272188119120809,0.1075151644639264,0.3144756173868615,0.3386821732452143,0.3501254222844883,0.9609285298153744,0.0018336035889258,0.8393755597740762,0.9799700095896768,0.9899206005587547,0.3244703685181688,0.3380276272464347,26,250,2.3849825308703227,18,2.2438976662663683,7438,1435,1469,5,18,250,1.9880616744835056,35,2.2438976662663683,5680,1948,890,5,21,250,6.222568775780765,31,5.820233101906957,3363,1116,560,5,0.052,0.0063093739287357,0.07,0.0126187478574714,0.1222150604186676,0.0781006919366164,5,0.056,0.0044877953325327,0.078,0.0089755906650654,0.0683757799174688,0.0758698505956715,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw2,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@a7f4df1f,0.3101976920433394,0.2144063882967919,0.2818060033172896,0.3386821732452143,0.3501254222844883,0.9609285298153744,0.0018336035889258,0.8393755597740762,0.9799700095896768,0.9899206005587547,0.3085000472940826,0.3380276272464347,6,250,4.901164661713413,18,2.2438976662663683,7438,647,1469,5,4,250,6.043134962400005,35,2.2438976662663683,5680,2402,890,5,4,250,50.22749701708349,31,5.820233101906957,3363,488,560,5,0.016,0.0136226227364443,0.018,0.0272452454728887,0.0363107040091395,0.0301080997376286,5,0.056,0.0044877953325327,0.078,0.0089755906650654,0.0683757799174688,0.0758698505956715,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw3,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@ffcc1562,-0.0239190771055059,-0.0427221325281671,-0.1080987731002049,0.3264466405549955,0.3383113176560135,0.9576200238786292,0.0015850845651131,0.8347393836254738,0.978197437299057,0.9890183716634496,-0.0206668611887605,0.3263627044282643,8,250,2.8591621990707816,19,2.246447283685753,7459,2253,1139,5,11,250,2.1705558593757988,37,2.246447283685753,5383,3020,633,5,10,242,6.108561864422867,30,5.677931797865433,3087,2003,381,5,0.008,0.0059160086681217,0.026,0.0118320173362435,0.0328719944942122,0.0314038877342943,5,0.044,0.0044928945673715,0.056,0.008985789134743,0.0654351328803159,0.070619441609037,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw3,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@32e455af,0.4822181114544578,0.3559901200911682,0.2245254271434283,0.7287533400919997,0.6500128979949741,0.9576200238786292,0.0015850845651131,0.8347393836254738,0.978197437299057,0.9890183716634496,0.4768912392138015,0.722488724591097,23,250,2.8332828950110813,66,2.2174409304337885,7459,1169,1679,5,28,250,2.4441778366453226,51,2.2174409304337885,5383,2283,769,5,24,242,7.909365288930587,54,5.681971188296817,3087,719,392,5,0.0839999999999999,0.006384913590082,0.1159999999999999,0.012769827180164,0.157191271790422,0.1027365151681033,5,0.088,0.0044348818608675,0.124,0.0088697637217351,0.1592918094341051,0.1398141311452831,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw3,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@95a4bd00,0.0971587070709652,0.1239852095861699,0.0058806272571663,0.3275506478456903,0.4039845192468114,0.9576200238786292,0.0015850845651131,0.8347393836254738,0.978197437299057,0.9890183716634496,0.0995750434612609,0.3280225508640207,6,250,2.57508445226547,33,2.246447283685753,7459,1250,2979,5,8,250,2.071777786919818,37,2.246447283685753,5383,598,684,5,13,242,8.55878377277594,29,5.710312716004443,3087,677,289,5,0.036,0.0062270024318883,0.046,0.0124540048637766,0.0695330127019944,0.0557594283703398,5,0.052,0.0044928945673715,0.064,0.008985789134743,0.068391555077888,0.0723290700921914,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw3,lora5,"LoRA, 5 donors",lora,test_raw.npz@3278dc67,0.4108841123350609,0.2979641097933286,0.3622128751991822,0.3264466405549955,0.3383113176560135,0.9576200238786292,0.0015850845651131,0.8347393836254738,0.978197437299057,0.9890183716634496,0.4091502255978135,0.3263627044282643,17,250,3.1458036559699827,19,2.246447283685753,7459,1595,1139,5,13,250,2.657283870918688,37,2.246447283685753,5383,2415,633,5,21,242,10.552067518496584,30,5.677931797865433,3087,753,381,5,0.0839999999999999,0.0062916073119399,0.086,0.0125832146238799,0.1471912817038062,0.10640893764835,5,0.044,0.0044928945673715,0.056,0.008985789134743,0.0654351328803159,0.070619441609037,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw3,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@3278dc67,0.5062400256266513,0.2384999032785154,0.4336480913529958,0.3264466405549955,0.3383113176560135,0.9576200238786292,0.0015850845651131,0.8347393836254738,0.978197437299057,0.9890183716634496,0.5034614893405126,0.3263627044282643,16,250,7.4446376132614365,19,2.246447283685753,7459,407,1139,5,23,250,7.4446376132614365,37,2.246447283685753,5383,3877,633,5,16,242,45.80500367297008,30,5.677931797865433,3087,530,381,5,0.016,0.0148892752265228,0.046,0.0297785504530457,0.0608082802201546,0.0479643426378919,5,0.044,0.0044928945673715,0.056,0.008985789134743,0.0654351328803159,0.070619441609037,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw4,zs_raw,"Zero-shot, real bulk",zs_raw,all_usable_raw.npz@ffcc1562,-0.02721553405723,-0.0546693798722003,-0.110151214367301,0.3195942137906433,0.3281554472895195,0.9574026218312436,0.0019098934241358,0.8362010756621817,0.9780919092752436,0.9889660731252368,-0.0238549668648079,0.3192060690844542,9,250,2.8886684094080337,20,2.2464807713988746,7344,2217,1128,5,9,250,2.2244638475107403,39,2.2464807713988746,5689,3125,727,5,9,249,6.112450935997427,32,6.131653968393001,3141,2081,447,5,0.012,0.0059183010139105,0.016,0.011836602027821,0.0342879547014294,0.0290659035266927,5,0.044,0.0044929615427977,0.0699999999999999,0.0089859230855955,0.0732572632573519,0.0767314599576936,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw4,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,all_usable_pseudo.npz@32e455af,0.4790596969979644,0.3609859446104006,0.212968896815106,0.7263060753306071,0.6581142256641244,0.9574026218312436,0.0019098934241358,0.8362010756621817,0.9780919092752436,0.9889660731252368,0.4738293075618644,0.7196972767096209,21,250,2.816441800613702,72,2.2176997875305258,7344,1277,1747,5,25,250,2.4591926193097438,48,2.2176997875305258,5689,2405,954,5,21,249,8.451226448111147,56,6.131833531246027,3141,697,358,5,0.064,0.0063771527289439,0.106,0.0127543054578879,0.1457430635827853,0.0973686065372401,5,0.08,0.004435399575061,0.1339999999999999,0.0088707991501221,0.1481702996089118,0.1370595395381833,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw4,zs_cal,Zero-shot + calibration,zs_cal,test_cal.npz@e2189b52,0.0597261589524896,0.1381139922344265,-0.0252971865636178,0.2773746411939304,0.2274822067567435,0.9574026218312436,0.0019098934241358,0.8362010756621817,0.9780919092752436,0.9889660731252368,0.0617508719560484,0.2784413118458455,8,250,2.445395064858912,15,2.2464807713988746,7344,817,807,5,6,250,1.6848829865498889,41,2.2464807713988746,5689,493,611,5,9,249,7.956278456018163,30,6.151779568893481,3141,507,392,5,0.044,0.0063473894162814,0.054,0.0126947788325628,0.072070774317082,0.0579363022235432,5,0.044,0.0044929615427977,0.072,0.0089859230855955,0.071492557047718,0.0738758161877446,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw4,lora5,"LoRA, 5 donors",lora,test_raw.npz@0c8c43a2,0.495261369635401,0.3819050410016353,0.4597246910197378,0.3195942137906433,0.3281554472895195,0.9574026218312436,0.0019098934241358,0.8362010756621817,0.9780919092752436,0.9889660731252368,0.4903166236798048,0.3192060690844542,16,250,2.610796789244035,20,2.2464807713988746,7344,839,1128,5,16,250,1.985511318942807,39,2.2464807713988746,5689,537,727,5,26,249,7.623228920981717,32,6.131653968393001,3141,795,447,5,0.048,0.0062547061612695,0.084,0.012509412322539,0.1253283990278476,0.0879497800356421,5,0.044,0.0044929615427977,0.0699999999999999,0.0089859230855955,0.0732572632573519,0.0767314599576936,5,True
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,"scSemiProfiler, 5 donors",scsemi,test_raw.npz@0c8c43a2,0.453002162271836,0.1061246669608767,0.3554618489885017,0.3195942137906433,0.3281554472895195,0.9574026218312436,0.0019098934241358,0.8362010756621817,0.9780919092752436,0.9889660731252368,0.4495100154263888,0.3192060690844542,2,250,2.1399177939635967,20,2.2464807713988746,7344,62,1128,5,10,250,5.1977584805154295,39,2.2464807713988746,5689,3374,727,5,5,249,36.402793482382194,32,6.131653968393001,3141,200,447,5,0.012,0.0152685780885467,0.03,0.0305371561770934,0.0391634444977007,0.032277428053351,5,0.044,0.0044929615427977,0.0699999999999999,0.0089859230855955,0.0732572632573519,0.0767314599576936,5,True
diff --git a/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_rbo.csv b/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_rbo.csv
new file mode 100644
index 0000000000000000000000000000000000000000..2da04da2a9bd43f2cd240d7e1637807d641d4f4c
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_rbo.csv
@@ -0,0 +1,1001 @@
+dataset,design,unit,arm,predictor,celltype,p,rbo_ext_t_desc,rbo_ext_t_asc,rbo_ext_mean_up_down,pred_defined,len_obs,len_pred
+giroux2022,fewshot,fewshot_n5/draw0,zs_raw,generated:zs_raw,T cell,0.98,0.0317407944062044,0.0358243348259396,0.033782564616072,True,5216,3980
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+ye2026_sepsis,fewshot,fewshot_n5/draw4,lora5,generated:lora5,NK cell,0.98,0.2020890666459269,0.018665825981598,0.1103774463137624,True,5614,3777
+ye2026_sepsis,fewshot,fewshot_n5/draw4,lora5,broadcast:test_raw.npz@0c8c43a2,NK cell,0.98,0.0195155287064324,0.0466653804671673,0.0330904545867998,True,5614,5857
+ye2026_sepsis,fewshot,fewshot_n5/draw4,lora5,generated:lora5,DC,0.98,0.0002830327268905,0.1190265393106823,0.0596547860187864,True,5305,3359
+ye2026_sepsis,fewshot,fewshot_n5/draw4,lora5,broadcast:test_raw.npz@0c8c43a2,DC,0.98,0.0772633735825056,0.093248189010563,0.0852557812965343,True,5305,5857
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,generated:scsemi5,T cell,0.98,0.0062009265061952,0.02170401519129,0.0139524708487426,True,5801,3757
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,broadcast:test_raw.npz@0c8c43a2,T cell,0.98,0.0197024655096327,0.1323460163900602,0.0760242409498464,True,5801,5857
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,generated:scsemi5,B cell,0.98,0.0322872495929879,0.0065493182720518,0.0194182839325199,True,5743,1449
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,broadcast:test_raw.npz@0c8c43a2,B cell,0.98,0.02886049072771,0.0386271154403361,0.0337438030840231,True,5743,5857
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,generated:scsemi5,Monocyte,0.98,0.0470050117982064,0.0037397384766871,0.0253723751374467,True,5749,3100
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,broadcast:test_raw.npz@0c8c43a2,Monocyte,0.98,0.2209444577604786,0.0901415819820501,0.1555430198712643,True,5749,5857
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,generated:scsemi5,NK cell,0.98,0.1077846909859364,0.0355224291081691,0.0716535600470528,True,5614,1464
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,broadcast:test_raw.npz@0c8c43a2,NK cell,0.98,0.0195155287064324,0.0466653804671673,0.0330904545867998,True,5614,5857
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,generated:scsemi5,DC,0.98,0.0025393436051778,0.0594415569968084,0.0309904503009931,True,5305,920
+ye2026_sepsis,fewshot,fewshot_n5/draw4,scsemi5,broadcast:test_raw.npz@0c8c43a2,DC,0.98,0.0772633735825056,0.093248189010563,0.0852557812965343,True,5305,5857
diff --git a/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_summary.csv b/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_summary.csv
new file mode 100644
index 0000000000000000000000000000000000000000..dca033a98a52482acf1f27da7baea7522dc1b81c
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261002T085943Z-deck-restructure-contrast-metrics-zeroshot-len/diffusion/dataset/server_1/model8/plans/paired_finetune_intradataset_20260927/scores_contrast/fewshot_summary.csv
@@ -0,0 +1,21 @@
+dataset,arm,label,role,pearson_r_mean,spearman_r_mean,partial_r_mean,broadcast_pearson_r_mean,broadcast_spearman_r_mean,splithalf_r_AB_mean,splithalf_r_AB_sd_mean,splithalf_spearman_AB_mean,sb_reliability_mean,noise_free_ceiling_mean,r_generated_vs_halfB_mean,r_broadcast_vs_halfB_mean,welch_top50_mean,welch_top50_max_mean,welch_top50_chance_mean,welch_top50_broadcast_mean,welch_top50_broadcast_chance_mean,welch_n_sig_obs_mean,welch_n_sig_gen_mean,welch_n_sig_broadcast_per_type_mean,welch_types_scored_mean,limma_top50_mean,limma_top50_max_mean,limma_top50_chance_mean,limma_top50_broadcast_mean,limma_top50_broadcast_chance_mean,limma_n_sig_obs_mean,limma_n_sig_gen_mean,limma_n_sig_broadcast_per_type_mean,limma_types_scored_mean,limma_fbe_top50_mean,limma_fbe_top50_max_mean,limma_fbe_top50_chance_mean,limma_fbe_top50_broadcast_mean,limma_fbe_top50_broadcast_chance_mean,limma_fbe_n_sig_obs_mean,limma_fbe_n_sig_gen_mean,limma_fbe_n_sig_broadcast_per_type_mean,limma_fbe_types_scored_mean,cat50_mean,cat50_chance_mean,cat100_mean,cat100_chance_mean,rbo_mean,rbo_up_down_mean,cat_types_mean,broadcast_cat50_mean,broadcast_cat50_chance_mean,broadcast_cat100_mean,broadcast_cat100_chance_mean,broadcast_rbo_mean,broadcast_rbo_up_down_mean,broadcast_cat_types_mean,repro_pass_mean,pearson_r_sd,spearman_r_sd,partial_r_sd,broadcast_pearson_r_sd,broadcast_spearman_r_sd,splithalf_r_AB_sd,splithalf_r_AB_sd_sd,splithalf_spearman_AB_sd,sb_reliability_sd,noise_free_ceiling_sd,r_generated_vs_halfB_sd,r_broadcast_vs_halfB_sd,welch_top50_sd,welch_top50_max_sd,welch_top50_chance_sd,welch_top50_broadcast_sd,welch_top50_broadcast_chance_sd,welch_n_sig_obs_sd,welch_n_sig_gen_sd,welch_n_sig_broadcast_per_type_sd,welch_types_scored_sd,limma_top50_sd,limma_top50_max_sd,limma_top50_chance_sd,limma_top50_broadcast_sd,limma_top50_broadcast_chance_sd,limma_n_sig_obs_sd,limma_n_sig_gen_sd,limma_n_sig_broadcast_per_type_sd,limma_types_scored_sd,limma_fbe_top50_sd,limma_fbe_top50_max_sd,limma_fbe_top50_chance_sd,limma_fbe_top50_broadcast_sd,limma_fbe_top50_broadcast_chance_sd,limma_fbe_n_sig_obs_sd,limma_fbe_n_sig_gen_sd,limma_fbe_n_sig_broadcast_per_type_sd,limma_fbe_types_scored_sd,cat50_sd,cat50_chance_sd,cat100_sd,cat100_chance_sd,rbo_sd,rbo_up_down_sd,cat_types_sd,broadcast_cat50_sd,broadcast_cat50_chance_sd,broadcast_cat100_sd,broadcast_cat100_chance_sd,broadcast_rbo_sd,broadcast_rbo_up_down_sd,broadcast_cat_types_sd,repro_pass_sd,n_draws
+giroux2022,zs_raw,"Zero-shot, real bulk",zs_raw,0.2552305197162609,0.13687654505725783,0.10257816757665701,0.4924984776861333,0.3779035206141612,0.8918163870617359,0.0019459062298349602,0.7723847048786027,0.9414191856214942,0.9700534567766811,0.2515396639929075,0.4794243737243824,0.0,28.8,0.00016224986479176,0.0,0.00581527309404742,35.6,5.4,0.8,5.0,1.0,117.6,0.4276070686922104,14.8,0.4138965353621624,264.6,113.4,19.0,5.0,2.2,114.0,0.7303845116169091,11.6,0.6999421921017228,296.4,123.0,34.4,5.0,0.03359999999999998,0.0070762755913249,0.040799999999999996,0.014152551182649862,0.03788245520838608,0.03734023861642988,5.0,0.16560000000000002,0.005075424169441301,0.16,0.01015084833888262,0.17302696673378146,0.1571012323462993,5.0,1.0,0.13126933801727203,0.10977312811520226,0.12634424753296944,0.08495229800119944,0.06350711215584778,0.020293406811133338,0.0006516136770564655,0.04223676244701674,0.012180217902953615,0.006412585844765131,0.1288055564250674,0.082213604574158,0.0,27.66224864323217,0.00036280172701452513,0.0,0.012893563432930508,36.83476618630828,12.074767078498866,1.3038404810405297,0.0,1.4142135623730951,43.58669521769229,0.659526107316382,13.881642554107204,0.5352705983471695,131.86849510023234,173.2636718992184,24.748737341529164,0.0,3.8987177379235853,40.20572098594925,1.1059444484489307,11.414902540100814,0.7988107283917532,152.51327811046485,183.6382313136347,45.4730689529528,0.0,0.03584410690755173,5.7606287718055344e-05,0.034658332331489926,0.0001152125754361128,0.022660332204379376,0.03043510354830164,0.0,0.03329864862122786,3.129837131534609e-05,0.03443835071544511,6.259674263069246e-05,0.03446527410357779,0.026659229204478864,0.0,0.0,5
+giroux2022,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,0.3690039512089414,0.27359669795602726,0.16039314653551318,0.6999505093675333,0.6443315213458607,0.8918163870617359,0.0019459062298349602,0.7723847048786027,0.9414191856214942,0.9700534567766811,0.3614820103251074,0.6829886739749652,0.2,28.8,0.037899352697091736,1.2,0.0135211622097098,35.6,9.4,3.0,5.0,1.4,117.6,0.4393663328434215,34.4,1.1652067198987182,264.6,84.8,194.0,5.0,2.4,114.0,0.764065288101372,26.0,1.7906472208932942,296.4,83.4,185.8,5.0,0.044,0.00935498165472376,0.059199999999999996,0.01870996330944756,0.045037335423972744,0.0543941866886241,5.0,0.2264,0.00505148321782172,0.2508,0.0101029664356435,0.28222055439151805,0.2509965094269241,5.0,1.0,0.03952253530699149,0.04358847512230311,0.06205089478011919,0.021509392135036394,0.04757158028246519,0.020293406811133338,0.0006516136770564655,0.04223676244701674,0.012180217902953615,0.006412585844765131,0.039371988231532734,0.01965562505888566,0.447213595499958,27.66224864323217,0.07385679058299788,1.3038404810405297,0.01715788865938149,36.83476618630828,7.402702209328699,3.082207001484488,0.0,2.073644135332772,43.58669521769229,0.2966436320566394,15.059880477613362,0.43541038176510644,131.86849510023234,95.29008342949439,223.16025631818943,0.0,4.8270073544588685,40.20572098594925,0.8357766193441694,10.793516572461451,0.7776662330474644,152.51327811046485,110.70591673438236,244.66242048994772,0.0,0.02529822128134704,0.00012901971131245319,0.01863330351816338,0.00025803942262493803,0.0057816078190336215,0.019947481968676156,0.0,0.038324926614411135,2.845540349140793e-05,0.015658863304850692,5.691080698279074e-05,0.02522323758068364,0.030684965857430864,0.0,0.0,5
+giroux2022,zs_cal,Zero-shot + calibration,zs_cal,0.22761975917695193,0.12238388321073672,0.11144915289264867,0.5124382671485485,0.37498767268687244,0.8918163870617359,0.0019459062298349602,0.7723847048786027,0.9414191856214942,0.9700534567766811,0.22237229810017425,0.49916342654355905,0.0,28.8,0.0028818443804034402,0.0,0.00301252432923564,35.6,14.0,0.6,5.0,1.2,117.6,0.4137953195487348,10.2,0.3233869789558136,264.6,154.2,14.2,5.0,1.4,114.0,0.653248798431691,9.4,0.5751006647845042,296.4,64.2,24.8,5.0,0.028800000000000003,0.008552628065107459,0.0412,0.017105256130214998,0.0402900339666904,0.037463104127278976,5.0,0.14959999999999998,0.005075424169441301,0.15679999999999997,0.01015084833888262,0.16791797090283284,0.14839986431186153,5.0,1.0,0.14815739224494467,0.11059868424118816,0.1125535197774861,0.08650752789466172,0.06521749555615086,0.020293406811133338,0.0006516136770564655,0.04223676244701674,0.012180217902953615,0.006412585844765131,0.14375587045740143,0.08342999255623201,0.0,27.66224864323217,0.0064439999351578545,0.0,0.004323807387227965,36.83476618630828,19.144189719076646,0.5477225575051661,0.0,0.8366600265340756,43.58669521769229,0.4243960205921686,14.27235089254745,0.5792302516616201,131.86849510023234,196.13184341151745,24.09771773425857,0.0,2.6076809620810595,40.20572098594925,0.8948333775146401,13.575713609236164,0.8696072988415744,152.51327811046485,108.73453913085758,35.478162297390774,0.0,0.023562682360037026,0.0002906793414634747,0.017469974241537966,0.0005813586829269761,0.01223470005290342,0.019016514185658185,0.0,0.032692506786724106,3.129837131534609e-05,0.04167973128512229,6.259674263069246e-05,0.031251556444328144,0.02417025867411984,0.0,0.0,5
+giroux2022,lora5,"LoRA, 5 donors",lora,0.2965942782817652,0.19009682156227814,0.18857337655691103,0.4924984776861333,0.3779035206141612,0.8918163870617359,0.0019459062298349602,0.7723847048786027,0.9414191856214942,0.9700534567766811,0.2896746664822431,0.4794243737243824,0.2,28.8,0.020480433409184137,0.0,0.00581527309404742,35.6,2.6,0.8,5.0,0.8,117.6,0.4806958737662952,14.8,0.4138965353621624,264.6,133.0,19.0,5.0,1.6,114.0,0.6786629586564743,11.6,0.6999421921017228,296.4,41.6,34.4,5.0,0.036,0.0084568065320328,0.04199999999999996,0.016913613064065657,0.025606547785785038,0.04425086577039609,5.0,0.16560000000000002,0.005075424169441301,0.16,0.01015084833888262,0.17302696673378146,0.1571012323462993,5.0,1.0,0.08188140682058051,0.04060475646987077,0.053971543170818495,0.08495229800119944,0.06350711215584778,0.020293406811133338,0.0006516136770564655,0.04223676244701674,0.012180217902953615,0.006412585844765131,0.07920589396763095,0.082213604574158,0.447213595499958,27.66224864323217,0.043675879853399005,0.0,0.012893563432930508,36.83476618630828,2.8809720581775866,1.3038404810405297,0.0,0.8366600265340756,43.58669521769229,0.4332785878581117,13.881642554107204,0.5352705983471695,131.86849510023234,150.97847528704216,24.748737341529164,0.0,3.0495901363953815,40.20572098594925,0.9042605746624267,11.414902540100814,0.7988107283917532,152.51327811046485,56.50929127143606,45.4730689529528,0.0,0.025612496949731396,8.560074174102039e-05,0.021540659228538057,0.00017120148348208282,0.010615987013238591,0.021024317815168364,0.0,0.03329864862122786,3.129837131534609e-05,0.03443835071544511,6.259674263069246e-05,0.03446527410357779,0.026659229204478864,0.0,0.0,5
+giroux2022,scsemi5,"scSemiProfiler, 5 donors",scsemi,0.3970062551717809,0.2745019965154537,0.24198622666508726,0.4924984776861333,0.3779035206141612,0.8918163870617359,0.0019459062298349602,0.7723847048786027,0.9414191856214942,0.9700534567766811,0.38598328001722615,0.4794243737243824,0.0,28.8,0.00949591007319426,0.0,0.00581527309404742,35.6,2.2,0.8,5.0,1.6,117.6,0.8857134107646362,14.8,0.4138965353621624,264.6,40.8,19.0,5.0,1.6,114.0,2.471588989885288,11.6,0.6999421921017228,296.4,23.2,34.4,5.0,0.0416,0.029868579550214557,0.06599999999999996,0.05973715910042916,0.04268536203758788,0.06364605805972408,5.0,0.16560000000000002,0.005075424169441301,0.16,0.01015084833888262,0.17302696673378146,0.1571012323462993,5.0,1.0,0.042436446862544296,0.014224041325155954,0.024076672798201235,0.08495229800119944,0.06350711215584778,0.020293406811133338,0.0006516136770564655,0.04223676244701674,0.012180217902953615,0.006412585844765131,0.0403237594721324,0.082213604574158,0.0,27.66224864323217,0.01689530851519966,0.0,0.012893563432930508,36.83476618630828,2.7748873851023212,1.3038404810405297,0.0,1.816590212458495,43.58669521769229,0.9423580389386731,13.881642554107204,0.5352705983471695,131.86849510023234,41.80550203023521,24.748737341529164,0.0,1.816590212458495,40.20572098594925,3.2415053293874663,11.414902540100814,0.7988107283917532,152.51327811046485,28.551707479588675,45.4730689529528,0.0,0.008294576541331087,0.002427900520721433,0.004690415759823388,0.004855801041442895,0.009035968557929248,0.001387658893246048,0.0,0.03329864862122786,3.129837131534609e-05,0.03443835071544511,6.259674263069246e-05,0.03446527410357779,0.026659229204478864,0.0,0.0,5
+imperial_eskd,zs_raw,"Zero-shot, real bulk",zs_raw,0.6379264923104611,0.4579520397469591,0.4253975150178781,0.6564998400670289,0.36005883262831695,0.8928874094438906,0.0019044078695567997,0.7075418243126216,0.9418520343603214,0.970253290404964,0.6296794765108765,0.6434425297289008,105.6,250.0,2.7988496724852263,74.8,2.2724655302199084,2234.4,4286.0,2055.4,5.0,89.8,250.0,2.7988496724852263,59.6,2.2724655302199084,4314.6,9351.4,1895.2,5.0,104.8,250.0,9.217714868331246,64.0,5.6994488222289075,2852.6,3395.2,1653.0,5.0,0.1072,0.0055976993449704,0.16799999999999998,0.01119539868994086,0.19646680519421716,0.17315676837829191,5.0,0.1592,0.00454493106043978,0.20879999999999996,0.00908986212087958,0.16132270590941664,0.15328522998995722,5.0,1.0,0.01099814102724702,0.01552022877584205,0.01652843287054426,0.008982646631564764,0.011701268653664143,0.018488530954232904,0.0008512437433744797,0.026999527491349908,0.010550493039085871,0.005474576052939896,0.01013980585556331,0.009621458066499144,5.412947441089743,0.0,0.0018167888301154885,7.726577508832744,0.0020658647547156035,531.316101769935,348.4013490214985,113.9793841008101,0.0,7.463243262818114,0.0,0.0018167888301154885,6.841052550594828,0.0020658647547156035,1711.2475858273694,432.961661120243,119.26315441073996,0.0,6.016643582596529,0.0,0.2534857369443142,6.123724356957944,0.06230886316134786,142.70879440314818,213.96424935021275,86.3655023721856,0.0,0.016346253393362042,3.6335776602293245e-06,0.01979898987322329,7.2671553204627275e-06,0.01861546185972926,0.012402680449186422,0.0,0.03038420642373271,4.131729509429319e-06,0.025635912310662937,8.263459018864638e-06,0.0281797687544646,0.017071291969871467,0.0,0.0,5
+imperial_eskd,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,0.6736855295384148,0.35199608879827543,0.37588723881873054,0.7725556910192004,0.6491475227258144,0.8928874094438906,0.0019044078695567997,0.7075418243126216,0.9418520343603214,0.970253290404964,0.6610850702783135,0.7590458269944419,98.6,250.0,3.0265479726426165,108.4,2.2333881315834248,2234.4,2071.8,1724.6,5.0,87.0,250.0,3.0265479726426165,77.6,2.2333881315834248,4314.6,4878.2,853.8,5.0,89.0,250.0,13.175929971781041,80.0,5.508064342197738,2852.6,1753.2,744.8,5.0,0.18719999999999998,0.00605309594528516,0.24359999999999998,0.01210619189057042,0.23368298030851306,0.2178626793033323,5.0,0.33359999999999995,0.0044667762631668,0.3396,0.00893355252633364,0.4291475502814036,0.3453851405893102,5.0,1.0,0.013332764642894202,0.02300676434861532,0.01375157656416254,0.012996289157552323,0.017501283000327238,0.018488530954232904,0.0008512437433744797,0.026999527491349908,0.010550493039085871,0.005474576052939896,0.01401540038288931,0.013275060560909388,4.159326868617082,0.0,0.006236499659673439,3.577708763999662,0.001762879864190652,531.316101769935,187.22900416335068,265.44359099439566,0.0,5.431390245600108,0.0,0.006236499659673439,4.159326868617084,0.001762879864190652,1711.2475858273694,699.1149404783165,195.68009607520128,0.0,4.123105625617661,0.0,0.5925096164666763,7.648529270389178,0.06110092573934644,142.70879440314818,117.95210892561437,98.61642865161971,0.0,0.025830214865540713,1.2472999319351633e-05,0.011260550608207397,2.4945998638703265e-05,0.017590256933250354,0.010076225936259462,0.0,0.014587666023048364,3.5257597284072532e-06,0.01699411662899841,7.0515194567716085e-06,0.02321719338690735,0.015527233089806473,0.0,0.0,5
+imperial_eskd,zs_cal,Zero-shot + calibration,zs_cal,0.6760005213181501,0.3746039956015627,0.4075448174775387,0.694487728922177,0.4609203743978344,0.8928874094438906,0.0019044078695567997,0.7075418243126216,0.9418520343603214,0.970253290404964,0.663909283761061,0.6809507847235224,103.8,250.0,3.0061989867631778,90.8,2.2724655302199084,2234.4,3278.2,2017.2,5.0,92.2,250.0,2.9864137973906506,63.8,2.2724655302199084,4314.6,6270.2,1853.2,5.0,99.6,250.0,12.776369391931826,68.2,5.693007116878189,2852.6,2620.4,1582.4,5.0,0.1544,0.0060123979735263195,0.21199999999999997,0.01202479594705268,0.21821651242575268,0.18333418971518736,5.0,0.18079999999999993,0.00454493106043978,0.2119999999999999,0.00908986212087958,0.20679596278045712,0.17694956386184962,5.0,1.0,0.020058053620141684,0.03572104412406848,0.02398273575648565,0.010079142565137795,0.009853166855228992,0.018488530954232904,0.0008512437433744797,0.026999527491349908,0.010550493039085871,0.005474576052939896,0.020192573364157612,0.010663033829095747,5.310367218940701,0.0,0.025002326476590685,8.228000972289685,0.0020658647547156035,531.316101769935,290.36649255725087,108.53432636728347,0.0,9.884331034521253,0.0,0.02507145087461019,7.155417527999326,0.0020658647547156035,1711.2475858273694,1048.5195277151495,120.59311754822492,0.0,8.73498712076898,0.0,0.526696070717575,7.981227975693965,0.06039291246791445,142.70879440314818,163.8026251315894,93.18959169349333,0.0,0.018889150324988155,5.0004652953188355e-05,0.01630950643030006,0.00010000930590637301,0.01906991012882745,0.012569800582192071,0.0,0.027040710049848968,4.131729509429319e-06,0.025019992006393602,8.263459018864638e-06,0.037558990190704675,0.021987809189308736,0.0,0.0,5
+imperial_eskd,lora5,"LoRA, 5 donors",lora,0.749155270620552,0.5497464281417919,0.602841204897082,0.6564998400670289,0.36005883262831695,0.8928874094438906,0.0019044078695567997,0.7075418243126216,0.9418520343603214,0.970253290404964,0.7376086770159653,0.6434425297289008,113.6,250.0,3.0652324741003425,74.8,2.2724655302199084,2234.4,2962.6,2055.4,5.0,102.0,250.0,3.0652324741003425,59.6,2.2724655302199084,4314.6,5798.6,1895.2,5.0,112.4,250.0,10.109205739081322,64.0,5.6994488222289075,2852.6,2113.4,1653.0,5.0,0.17439999999999997,0.00613046494820062,0.2564,0.0122609298964013,0.2843228378571385,0.23574692167500202,5.0,0.1592,0.00454493106043978,0.20879999999999996,0.00908986212087958,0.16132270590941664,0.15328522998995722,5.0,1.0,0.023768974389021095,0.03839747223603832,0.03326718969685236,0.008982646631564764,0.011701268653664143,0.018488530954232904,0.0008512437433744797,0.026999527491349908,0.010550493039085871,0.005474576052939896,0.023581578410345572,0.009621458066499144,6.308724118235003,0.0,0.030620151137126666,7.726577508832744,0.0020658647547156035,531.316101769935,1006.3539635734536,113.9793841008101,0.0,12.267844146385299,0.0,0.030620151137126666,6.841052550594828,0.0020658647547156035,1711.2475858273694,1914.7622045570045,119.26315441073996,0.0,9.555103348473004,0.0,0.3622155002197732,6.123724356957944,0.06230886316134786,142.70879440314818,577.0037261578126,86.3655023721856,0.0,0.06726663363064926,6.124030227425897e-05,0.04946513923967061,0.00012248060454850762,0.04807050115295255,0.026318141433433587,0.0,0.03038420642373271,4.131729509429319e-06,0.025635912310662937,8.263459018864638e-06,0.0281797687544646,0.017071291969871467,0.0,0.0,5
+imperial_eskd,scsemi5,"scSemiProfiler, 5 donors",scsemi,0.562052088951237,0.3728391926894947,0.43091939773883425,0.6564998400670289,0.36005883262831695,0.8928874094438906,0.0019044078695567997,0.7075418243126216,0.9418520343603214,0.970253290404964,0.5553470734473418,0.6434425297289008,46.8,250.0,6.022185335978555,74.8,2.2724655302199084,2234.4,3166.6,2055.4,5.0,35.2,250.0,5.481608492826089,59.6,2.2724655302199084,4314.6,5027.0,1895.2,5.0,41.6,250.0,38.773020168587706,64.0,5.6994488222289075,2852.6,944.0,1653.0,5.0,0.1176,0.01204437067195706,0.1276,0.02408874134391416,0.16229347932926466,0.1357022388604328,5.0,0.1592,0.00454493106043978,0.20879999999999996,0.00908986212087958,0.16132270590941664,0.15328522998995722,5.0,1.0,0.03207665502012227,0.02713378915227594,0.02252085464551142,0.008982646631564764,0.011701268653664143,0.018488530954232904,0.0008512437433744797,0.026999527491349908,0.010550493039085871,0.005474576052939896,0.029267278750627613,0.009621458066499144,12.988456413292536,0.0,0.9866675693796577,7.726577508832744,0.0020658647547156035,531.316101769935,1677.5618617505584,113.9793841008101,0.0,7.3280283842245035,0.0,0.6901633767072863,6.841052550594828,0.0020658647547156035,1711.2475858273694,3627.1333722376407,119.26315441073996,0.0,10.737783756436894,0.0,5.532269988666675,6.123724356957944,0.06230886316134786,142.70879440314818,421.322323168379,86.3655023721856,0.0,0.0583506640921935,0.0019733351387593197,0.04506439836500647,0.003946670277518648,0.05132905998376349,0.03266794647839565,0.0,0.03038420642373271,4.131729509429319e-06,0.025635912310662937,8.263459018864638e-06,0.0281797687544646,0.017071291969871467,0.0,0.0,5
+ji2025_chili,zs_raw,"Zero-shot, real bulk",zs_raw,0.08657672127100896,0.07682118318860098,0.03865926885431234,0.23359889293846753,0.12055707797364149,0.8751489052663534,0.00309644121106452,0.757011461526792,0.9307003099815306,0.9643032469006512,0.08612699741870046,0.22741355202048658,0.0,176.4,0.03993545169855238,1.0,0.26393584469962184,1839.6,3.8,6.2,5.0,0.0,210.0,0.4982902715761199,6.2,0.7375012724151995,1395.6,248.8,16.6,5.0,0.4,227.6,1.0518763217947031,7.0,2.764051484763918,790.8,27.2,17.4,5.0,0.004,0.008097692329686221,0.0172,0.01619538465937248,0.012588097368728299,0.0184883045135506,5.0,0.032,0.00475978021739962,0.046799999999999994,0.00951956043479928,0.05244988239994902,0.042904933454154935,5.0,1.0,0.041586065970031234,0.03839779678702155,0.03534470499647518,0.025677506700839133,0.016259211548616134,0.01211859197463722,0.0007028205393251526,0.014222768803460288,0.007625697815775261,0.004083218127415403,0.040853440915709804,0.024187243747838847,0.0,75.7218594594718,0.05688901821561241,2.2360679774997894,0.49108189284437387,964.9105139856234,4.711687595755898,10.059821071967434,0.0,0.0,66.76825593049439,0.47521414567531,5.890670590009257,0.7036595208777047,1099.6712235936702,310.4121453809435,13.722244714331545,0.0,0.5477225575051661,41.24681805909397,0.7543688105371602,8.12403840463596,3.0557865518793,334.2045780655914,21.40560674215987,17.924843095547587,0.0,0.0,5.566186906799305e-05,0.00923038460737146,0.00011132373813595303,0.0020019268985218336,0.005742901202895012,0.0,0.01649242250247064,1.8874695279858344e-05,0.005761944116355177,3.774939055972932e-05,0.0069073507444696956,0.008814283296169298,0.0,0.0,5
+ji2025_chili,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,0.1770241554155239,0.16203758395926116,0.05400871807991294,0.6069569747201202,0.5207509490978101,0.8751489052663534,0.00309644121106452,0.757011461526792,0.9307003099815306,0.9643032469006512,0.17348614608711216,0.5881902888487749,1.6,176.4,0.739665327683398,26.0,1.6158290626572853,1839.6,163.0,862.4,5.0,1.8,210.0,0.9965855457526004,29.6,1.9381466919640722,1395.6,498.4,223.8,5.0,4.6,227.6,5.035848838813449,59.2,6.652883143330699,790.8,341.8,208.0,5.0,0.013599999999999978,0.00685187037056242,0.0252,0.01370374074112484,0.029416484375413658,0.02706516371931946,5.0,0.2616,0.00460910742245948,0.2944,0.00921821484491902,0.148075902811479,0.21145974462385206,5.0,1.0,0.033528836485659554,0.026256461680592508,0.03843513457000203,0.04397590576868324,0.04410932954910149,0.01211859197463722,0.0007028205393251526,0.014222768803460288,0.007625697815775261,0.004083218127415403,0.03300254439072789,0.04297514107911369,2.1908902300206647,75.7218594594718,0.6953178641079059,14.474114826130128,0.7035977779060537,964.9105139856234,173.99712641305317,311.75038091396135,0.0,3.0331501776206204,66.76825593049439,0.8793747627627114,11.865917579353061,0.6028453095997592,1099.6712235936702,670.2960539940542,93.36862428032235,0.0,6.6932802122726045,41.24681805909397,4.029292169114654,21.358838919754042,1.2742750645724956,334.2045780655914,358.3646187892996,79.54872720540537,0.0,0.010039920318408871,3.0109310324316255e-05,0.01237739875741264,6.021862064863251e-05,0.016429186797804387,0.016961100316026947,0.0,0.12272245108373613,1.844944337588909e-05,0.10966676798374247,3.6898886751764856e-05,0.024763200431648945,0.06507758087735215,0.0,0.0,5
+ji2025_chili,zs_cal,Zero-shot + calibration,zs_cal,0.13988164321283653,0.1205260931996931,0.11766673440474999,0.18886958139106869,0.10709375060807229,0.8751489052663534,0.00309644121106452,0.757011461526792,0.9307003099815306,0.9643032469006512,0.138099243062488,0.18459478769272444,0.0,176.4,0.00239578342117872,0.6,0.1334212572082815,1839.6,0.4,3.4,5.0,0.0,210.0,0.01705373391551504,4.2,0.5774795952316935,1395.6,1.2,13.0,5.0,0.0,227.6,0.09965884228872324,3.8,1.4690872027054036,790.8,0.8,9.4,5.0,0.013600000000000001,0.0079613559247441,0.02839999999999996,0.01592271184948824,0.0189223531942819,0.027753156004786984,5.0,0.0288,0.00475978021739962,0.04639999999999998,0.00951956043479928,0.051884357951747395,0.04172687382825174,5.0,1.0,0.08608675459725455,0.09368933407937607,0.08624754183818169,0.04528094837394739,0.041749370779099605,0.01211859197463722,0.0007028205393251526,0.014222768803460288,0.007625697815775261,0.004083218127415403,0.08376146000974881,0.043058637129027334,0.0,75.7218594594718,0.005357134589122627,0.894427190999916,0.12772726661784875,964.9105139856234,0.8944271909999159,2.8809720581775866,0.0,0.0,66.76825593049439,0.015972454608133454,5.167204273105526,0.6727523842055141,1099.6712235936702,1.0954451150103321,13.45362404707371,0.0,0.0,41.24681805909397,0.16273582666634043,6.379655163094632,1.8221489312195378,334.2045780655914,1.0954451150103321,11.23832727766904,0.0,0.015388307249337076,0.00023200928555636152,0.022600884938426605,0.0004640185711127229,0.006470027112997276,0.011917082806752273,0.0,0.016346253393362042,1.8874695279858344e-05,0.01089954127475101,3.774939055972932e-05,0.005644784774175265,0.008670258036783146,0.0,0.0,5
+ji2025_chili,lora5,"LoRA, 5 donors",lora,0.33313865479653937,0.2864657892984832,0.30049892673125483,0.23359889293846753,0.12055707797364149,0.8751489052663534,0.00309644121106452,0.757011461526792,0.9307003099815306,0.9643032469006512,0.32580557728825404,0.22741355202048658,0.2,176.4,0.04670026500690598,1.0,0.26393584469962184,1839.6,7.0,6.2,5.0,3.0,210.0,1.4139628498275238,6.2,0.7375012724151995,1395.6,960.2,16.6,5.0,4.8,227.6,1.8777450701311296,7.0,2.764051484763918,790.8,89.4,17.4,5.0,0.0528,0.007418077869956919,0.07319999999999997,0.014836155739913901,0.04503083532190884,0.06971482789615355,5.0,0.032,0.00475978021739962,0.046799999999999994,0.00951956043479928,0.05244988239994902,0.042904933454154935,5.0,1.0,0.07655216760620362,0.06879042043578251,0.07616518463308203,0.025677506700839133,0.016259211548616134,0.01211859197463722,0.0007028205393251526,0.014222768803460288,0.007625697815775261,0.004083218127415403,0.07282967995501535,0.024187243747838847,0.447213595499958,75.7218594594718,0.042206007094686145,2.2360679774997894,0.49108189284437387,964.9105139856234,7.035623639735144,10.059821071967434,0.0,1.8708286933869707,66.76825593049439,0.31245731255946835,5.890670590009257,0.7036595208777047,1099.6712235936702,408.0847951100359,13.722244714331545,0.0,2.7748873851023217,41.24681805909397,1.2750142149680679,8.12403840463596,3.0557865518793,334.2045780655914,95.97291284523982,17.924843095547587,0.0,0.012132600710482482,0.00037142613394639814,0.01972815247305231,0.000742852267892806,0.020561914927224166,0.010381771914061009,0.0,0.01649242250247064,1.8874695279858344e-05,0.005761944116355177,3.774939055972932e-05,0.0069073507444696956,0.008814283296169298,0.0,0.0,5
+ji2025_chili,scsemi5,"scSemiProfiler, 5 donors",scsemi,0.15272763169924178,0.09237465877207313,0.08505804968171457,0.23359889293846753,0.12055707797364149,0.8751489052663534,0.00309644121106452,0.757011461526792,0.9307003099815306,0.9643032469006512,0.1489383978752594,0.22741355202048658,0.0,176.4,0.029498525073746302,1.0,0.26393584469962184,1839.6,0.4,6.2,5.0,0.6,210.0,1.2307844820377254,6.2,0.7375012724151995,1395.6,153.8,16.6,5.0,0.2,227.6,2.6303394189805944,7.0,2.764051484763918,790.8,10.2,17.4,5.0,0.0256,0.02645367126763374,0.0388,0.0529073425352675,0.026397715913294983,0.055094542468920406,5.0,0.032,0.00475978021739962,0.046799999999999994,0.00951956043479928,0.05244988239994902,0.042904933454154935,5.0,1.0,0.08045704828484662,0.07232747645899786,0.08634437625922131,0.025677506700839133,0.016259211548616134,0.01211859197463722,0.0007028205393251526,0.014222768803460288,0.007625697815775261,0.004083218127415403,0.07704542189263243,0.024187243747838847,0.0,75.7218594594718,0.06596070730087873,2.2360679774997894,0.49108189284437387,964.9105139856234,0.8944271909999159,10.059821071967434,0.0,1.3416407864998738,66.76825593049439,1.6651703980158417,5.890670590009257,0.7036595208777047,1099.6712235936702,212.13368426537073,13.722244714331545,0.0,0.447213595499958,41.24681805909397,1.8280880572719718,8.12403840463596,3.0557865518793,334.2045780655914,6.723094525588644,17.924843095547587,0.0,0.008294576541331087,0.005770740242127808,0.01591225942473287,0.011541480484255642,0.021212771097184637,0.0067054033168333135,0.0,0.01649242250247064,1.8874695279858344e-05,0.005761944116355177,3.774939055972932e-05,0.0069073507444696956,0.008814283296169298,0.0,0.0,5
+ye2026_sepsis,zs_raw,"Zero-shot, real bulk",zs_raw,-0.024065804865938577,-0.05440245752895491,-0.10541265591339936,0.3200255010646996,0.33433707882259206,0.958089173968262,0.00183278795617168,0.8383133958552381,0.9784573903593697,0.9891517994132032,-0.02065594348140122,0.3195674632237525,10.0,250.0,2.88025473910231,20.0,2.2455367188444244,7408.6,2330.2,1209.0,5.0,9.2,250.0,2.14762242658609,35.4,2.2455367188444244,5481.4,3217.2,702.2,5.0,9.6,248.2,6.118765128472182,31.8,5.933696728395304,3202.6,2098.6,423.8,5.0,0.009600000000000001,0.0059183388682649395,0.0232,0.01183667773652996,0.03335892056024984,0.02991652405353818,5.0,0.04479999999999998,0.00449107343768882,0.06679999999999998,0.008982146875377659,0.06828647529538794,0.07212358658336074,5.0,1.0,0.0185966808967075,0.017228371064822254,0.013568436465297273,0.023945886663720144,0.01434754714745265,0.0015945800640555397,0.0001622377826717237,0.0027631412201688226,0.00084893749204613,0.00043141319575519245,0.018305891152277917,0.023807354496458658,1.5811388300841898,0.0,0.07781782768818486,1.8708286933869704,0.0010538235247279037,173.91175923438877,262.36367888867545,150.60378481299864,0.0,1.7888543819998317,0.0,0.21248231554800337,3.361547262794323,0.0010538235247279037,262.35148179493865,310.94243840299447,121.99877048560776,0.0,0.8944271909999157,3.4928498393145966,0.013712879642517264,1.3038404810405306,0.22845275124413866,121.3148795490479,165.34448887096295,91.14658523499386,0.0,0.0021908902300206644,3.868554230876424e-06,0.006099180272790763,7.737108461753377e-06,0.004792919195411936,0.0027697813215589616,0.0,0.006572670690062011,2.107647049458657e-06,0.00807465169527453,4.2152940989395566e-06,0.00297242276264398,0.0039057093844271497,0.0,0.0,5
+ye2026_sepsis,zs_pseudo,"Zero-shot, sc pseudobulk input (reference)",other,0.4798664697928393,0.3607437314686131,0.21824892009822747,0.7293343787014326,0.6570950388186011,0.958089173968262,0.00183278795617168,0.8383133958552381,0.9784573903593697,0.9891517994132032,0.4748585686844701,0.7228345732568215,20.8,250.0,2.896535551643592,65.6,2.2165545574540295,7408.6,1201.2,1696.0,5.0,26.0,250.0,2.529652720549823,49.8,2.2165545574540295,5481.4,2293.6,852.2,5.0,22.0,248.2,8.57168651596883,53.2,5.935184852953236,3202.6,661.4,356.0,5.0,0.08399999999999999,0.0063765448939007,0.10759999999999996,0.012753089787801458,0.15418447340543256,0.10328222123574897,5.0,0.09519999999999998,0.004433109114908,0.1336,0.0088662182298161,0.15398213831469265,0.14009090443672564,5.0,1.0,0.007412057590171592,0.004654540456669154,0.00887648399020374,0.0021991513414158057,0.006365512727303765,0.0015945800640555397,0.0001622377826717237,0.0027631412201688226,0.00084893749204613,0.00043141319575519245,0.007470455362686037,0.002157560170190739,2.4899799195977463,0.0,0.16760966302431027,4.505552130427525,0.0011803725699270234,173.91175923438877,97.54588663803307,68.89847603539572,0.0,4.690415759823429,0.0,0.3760821353290802,2.387467277262664,0.0011803725699270234,262.35148179493865,450.4789673225599,89.0713197387352,0.0,2.121320343559642,3.4928498393145966,0.8058448493550662,2.1679483388678795,0.22527253494577384,121.3148795490479,108.14249858404418,34.93565513912685,0.0,0.01296148139681572,5.727334440089241e-06,0.013667479650615866,1.145466888015161e-05,0.006573605409809156,0.004886432209342629,0.0,0.01213260071048245,2.3607451398512665e-06,0.009528903399657276,4.721490279703253e-06,0.009617564961890075,0.0037911629760527554,0.0,0.0,5
+ye2026_sepsis,zs_cal,Zero-shot + calibration,zs_cal,0.09563587658297415,0.1291455858407972,0.004334384487540081,0.3088545635903286,0.3484216402823178,0.958089173968262,0.00183278795617168,0.8383133958552381,0.9784573903593697,0.9891517994132032,0.09787681405082668,0.30920264006831133,9.4,250.0,2.49773546242715,26.6,2.2455367188444244,7408.6,1135.4,2056.8,5.0,9.6,250.0,1.993531952343428,36.4,2.2455367188444244,5481.4,1175.2,720.6,5.0,13.2,248.2,9.373798017930724,29.2,5.967073190430776,3202.6,675.8,362.8,5.0,0.048799999999999996,0.00626887045379602,0.056399999999999985,0.01253774090759208,0.08891504609752904,0.06751186343050132,5.0,0.04719999999999998,0.00449107343768882,0.07039999999999998,0.008982146875377659,0.06713348858227183,0.0712484290539251,5.0,1.0,0.044020052291795474,0.020738239377944383,0.04297100698861383,0.02443264262264913,0.07735010731105305,0.0015945800640555397,0.0001622377826717237,0.0027631412201688226,0.00084893749204613,0.00043141319575519245,0.043822581861552405,0.024233842188764957,2.6076809620810595,0.0,0.32423353817149353,7.127411872482185,0.0010538235247279037,173.91175923438877,280.86705039929484,1085.162752770293,0.0,5.594640292279746,0.0,0.6000365932834585,3.5777087639996643,0.0010538235247279037,262.35148179493865,1035.2638311078003,172.75502887036313,0.0,7.014271166700073,3.4928498393145966,3.250314895330469,1.9235384061671346,0.23211752137895744,121.3148795490479,233.42386339018555,78.25407337640642,0.0,0.025830214865540702,9.12245083896928e-05,0.014587666023048335,0.00018244901677934354,0.03411305378483989,0.016829036188140748,0.0,0.005215361924162154,2.107647049458657e-06,0.006693280212272567,4.2152940989395566e-06,0.00386084449797378,0.0028906192521034346,0.0,0.0,5
+ye2026_sepsis,lora5,"LoRA, 5 donors",lora,0.3501183786066874,0.22084708968550243,0.3046976237489983,0.3200255010646996,0.33433707882259206,0.958089173968262,0.00183278795617168,0.8383133958552381,0.9784573903593697,0.9891517994132032,0.34826731843618913,0.3195674632237525,16.4,250.0,2.579590565096745,20.0,2.2455367188444244,7408.6,1232.6,1209.0,5.0,16.2,250.0,2.1933688858432836,35.4,2.2455367188444244,5481.4,2522.8,702.2,5.0,22.6,248.2,9.399377404005367,31.8,5.933696728395304,3202.6,912.4,423.8,5.0,0.05439999999999998,0.00623607512721374,0.0748,0.01247215025442752,0.11743888426406543,0.08262284724327562,5.0,0.04479999999999998,0.00449107343768882,0.06679999999999998,0.008982146875377659,0.06828647529538794,0.07212358658336074,5.0,1.0,0.1619834577611228,0.12897458394021577,0.18870601612503707,0.023945886663720144,0.01434754714745265,0.0015945800640555397,0.0001622377826717237,0.0027631412201688226,0.00084893749204613,0.00043141319575519245,0.1597169000859235,0.023807354496458658,6.730527468185536,0.0,0.5847302259109664,1.8708286933869704,0.0010538235247279037,173.91175923438877,624.2345712951181,150.60378481299864,0.0,4.024922359499621,0.0,0.4124754744781823,3.361547262794323,0.0010538235247279037,262.35148179493865,2174.2472720461215,121.99877048560776,0.0,4.393176527297759,3.4928498393145966,4.21271695749488,1.3038404810405306,0.22845275124413866,121.3148795490479,274.9750897808745,91.14658523499386,0.0,0.017111399708965906,7.681598784487738e-05,0.011366617790706253,0.0001536319756897335,0.02234143045831712,0.016271314678887545,0.0,0.006572670690062011,2.107647049458657e-06,0.00807465169527453,4.2152940989395566e-06,0.00297242276264398,0.0039057093844271497,0.0,0.0,5
+ye2026_sepsis,scsemi5,"scSemiProfiler, 5 donors",scsemi,0.4024985945062919,0.1571575445412721,0.3289412356737416,0.3200255010646996,0.33433707882259206,0.958089173968262,0.00183278795617168,0.8383133958552381,0.9784573903593697,0.9891517994132032,0.39958214526561436,0.3195674632237525,5.2,250.0,4.614053939742705,20.0,2.2455367188444244,7408.6,291.4,1209.0,5.0,11.4,250.0,6.932590946144366,35.4,2.2455367188444244,5481.4,3511.0,702.2,5.0,7.4,248.2,46.49456212032298,31.8,5.933696728395304,3202.6,372.8,423.8,5.0,0.015199999999999981,0.01577590611418414,0.032799999999999996,0.03155181222836836,0.04415452668437704,0.03506358575479736,5.0,0.04479999999999998,0.00449107343768882,0.06679999999999998,0.008982146875377659,0.06828647529538794,0.07212358658336074,5.0,1.0,0.08235142666764773,0.0722110212710611,0.08110513110461695,0.023945886663720144,0.01434754714745265,0.0015945800640555397,0.0001622377826717237,0.0027631412201688226,0.00084893749204613,0.00043141319575519245,0.0819292612873449,0.023807354496458658,6.418722614352484,0.0,2.0020273949154137,1.8708286933869704,0.0010538235247279037,173.91175923438877,249.8785705097578,150.60378481299864,0.0,7.3006848993775915,0.0,1.4980421398569959,3.361547262794323,0.0010538235247279037,262.35148179493865,856.9127726904296,121.99877048560776,0.0,5.079370039680118,3.4928498393145966,6.659023838420951,1.3038404810405306,0.22845275124413866,121.3148795490479,145.74875642694178,91.14658523499386,0.0,0.008671793355471483,0.0031226674556559105,0.011966620241321273,0.006245334911311827,0.014285242196265978,0.010315544235766335,0.0,0.006572670690062011,2.107647049458657e-06,0.00807465169527453,4.2152940989395566e-06,0.00297242276264398,0.0039057093844271497,0.0,0.0,5