diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_Adjusted.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_Adjusted.txt
new file mode 100644
index 0000000000000000000000000000000000000000..829a609138682f136529d7d64abd5fb428cac096
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_Adjusted.txt
@@ -0,0 +1,22 @@
+Mixture	B cell	DC	Monocyte	NK cell	Other	T cell	P-value	Correlation	RMSE
+HS9	0.00000000000000000	0.08577186607814884	0.17963784809851838	0.00000000000000000	0.26731005933149149	0.46728022649184137	9999.00000000000000000	0.90415346551035713	0.60717231224018464
+HS14	0.06496898657537244	0.08393390547769365	0.24708593794459296	0.01466222282533443	0.17568171389259976	0.41366723328440685	9999.00000000000000000	0.90877970820243370	0.53144008680809462
+HS19	0.17009937038231490	0.00000000000000000	0.27694581941002649	0.02812810184301807	0.10910697860076594	0.41571972976387461	9999.00000000000000000	0.92492933346343276	0.50652221061576663
+HS24	0.13026468019867057	0.00000000000000000	0.36225361337542739	0.02999780640876026	0.17646294215598768	0.30102095786115418	9999.00000000000000000	0.90539511416113072	0.48698786288487711
+HS25	0.05017641602726038	0.08753287342073564	0.43657134668170022	0.02745228371447436	0.21718943732325605	0.18107764283257344	9999.00000000000000000	0.93562386326294733	0.37760261304975418
+HS26	0.00402155207683399	0.08044932449958614	0.16415503935579509	0.04158909339817499	0.14127563584350361	0.56850935482610621	9999.00000000000000000	0.93805216270350722	0.60053775337802751
+HS32	0.11365322757264819	0.05577584940177933	0.26302729365526101	0.00009341323050006	0.16792367678066147	0.39952653935914995	9999.00000000000000000	0.92859743022121366	0.49747517887466058
+HS42	0.01067832818461571	0.08157070902930347	0.25039524816043207	0.00000000000000000	0.18076919951188919	0.47658651511375955	9999.00000000000000000	0.93161411014542306	0.53045312450980575
+HS43	0.10656074868896881	0.00000000000000000	0.23318785222672819	0.00000000000000000	0.20237089328852176	0.45788050579578121	9999.00000000000000000	0.88457674531298081	0.60236283553034320
+HS50	0.08450740512092288	0.00048786925711956	0.18014612676810560	0.01458312955619786	0.15294996583312803	0.56732550346452604	9999.00000000000000000	0.92036892868116338	0.62637999466660332
+HS55	0.05445516632516309	0.04535333604018627	0.23535119800852899	0.00000000000000000	0.27357894432885654	0.39126135529726513	9999.00000000000000000	0.91939266599580483	0.55569647745989492
+HS59	0.08371252047536520	0.00338607022562487	0.33728462517018482	0.04068959089418437	0.22925598965635643	0.30567120357828426	9999.00000000000000000	0.92791664276035934	0.48346994900234169
+HS67	0.12517788848164774	0.04421039503142061	0.21194448235264374	0.05346247890841199	0.14034242576994352	0.42486232945593239	9999.00000000000000000	0.95312441324906361	0.50908237148094093
+HS71	0.11951097233114770	0.00467344258380152	0.16719608606357714	0.14836332950868605	0.13537802468716917	0.42487814482561842	9999.00000000000000000	0.92357066447611214	0.59228116031308997
+HS73	0.11754193037047266	0.08019580597385528	0.14987964614356383	0.32975757684526524	0.01586023991124308	0.30676480075559986	9999.00000000000000000	0.91672536160389206	0.52810255991421196
+HS80	0.11060950676022502	0.01322684273605369	0.17662501674965253	0.00000000000000000	0.27453547503524772	0.42500315871882105	9999.00000000000000000	0.90578621829374473	0.60928282639347708
+HS91	0.05495535027211323	0.05401017208703889	0.30236488256186839	0.00323142729606810	0.16352697774733244	0.42191119003557886	9999.00000000000000000	0.93325115666571190	0.48887304438010903
+HS102	0.20172880951823643	0.04919746771571829	0.25014128890846110	0.00000000000000000	0.18521308883659371	0.31371934502099041	9999.00000000000000000	0.93806286048886611	0.45345701556302542
+HS105	0.13722954184171562	0.00000000000000000	0.28126422702437737	0.00335871973251215	0.18091153094897255	0.39723598045242225	9999.00000000000000000	0.92165919591603429	0.52004057332921938
+HS108	0.11496783518691588	0.03846339230150758	0.26742228125526574	0.08199295290071730	0.16140183870857377	0.33575169964701973	9999.00000000000000000	0.93430820437062301	0.49092309655677979
+HS111	0.10317991206193571	0.07725657178278175	0.23167365454186087	0.00583269786178887	0.01008833874698797	0.57196882500464485	9999.00000000000000000	0.94277777896927217	0.50507540194572120
diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.CIBERSORTx_refsample_inferred_refsample.bm.K999.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.CIBERSORTx_refsample_inferred_refsample.bm.K999.txt
new file mode 100644
index 0000000000000000000000000000000000000000..a4338c169b9e2dde49ff6402b1b0d88497172b42
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.CIBERSORTx_refsample_inferred_refsample.bm.K999.txt
@@ -0,0 +1,1763 @@
+NAME	B cell	DC	Monocyte	NK cell	Other	T cell
+ENSG00000000938	25.47499499812766643	149.04849213419311127	330.13168797572740232	70.80193469325564593	51.30541873125265084	10.29012375294272807
+ENSG00000000971	1.00000000000000000	1.36443148688047033	1.00000000000000000	1.00000000000000000	4.45613578657202947	7.54383617246181881
+ENSG00000002933	1.00000000000000000	33.92060595351973973	178.69101217000692827	2.16090085906662832	16.04007355274337243	1.85866391894212213
+ENSG00000003096	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	3.99970879836598403	1.00000000000000000
+ENSG00000003147	1.00000000000000000	4.21436522816597936	2.19100076431732216	3.41080038572805133	17.33457174441587156	2.30958617077003714
+ENSG00000003249	12.98381145354703925	1.64341783554240095	1.00000000000000000	1.00000000000000000	2.68264254833842752	2.28073770491802685
+ENSG00000003436	2.82149362477231502	7.02620269845334455	2.30821559392988185	1.00000000000000000	25.96854402528813921	1.00000000000000000
+ENSG00000004468	18.31806078640571300	16.71615288591022974	16.06151051642745387	109.99815234931428165	27.13127386755866866	8.72479099761809351
+ENSG00000004660	10.38110631823257535	17.20974672671119166	10.20815288962026202	1.00000000000000000	1.62735257214554707	1.90612540775643180
+ENSG00000005187	48.12602222503309690	1.34317089910775467	3.36322963898416116	1.00000000000000000	16.66989041515868308	1.99245732433505185
+ENSG00000005238	7.48850561601518550	22.33913022147941163	47.72119069631387589	3.86635150439950914	2.69721656483367322	3.27633236493187852
+ENSG00000005249	6.46448087431694685	14.46440147349383665	6.44686580517932128	1.00000000000000000	31.61300797800657847	1.00000000000000000
+ENSG00000005379	2.66666666666666918	6.41471991618333703	1.70821529745042500	30.74911874293858105	1.49358341559723606	2.76616036736136062
+ENSG00000005381	1.00000000000000000	3.46830115249967630	5.51821888556396800	1.00000000000000000	19.98811711380619727	1.00000000000000000
+ENSG00000005471	18.05765062472917037	2.45233422537214096	1.00000000000000000	1.00000000000000000	2.67728950016772860	1.00000000000000000
+ENSG00000005961	1.00000000000000000	2.63773337700622257	1.00000000000000000	1.00000000000000000	28.02457180751471100	1.00000000000000000
+ENSG00000006025	5.14080705326174936	3.01664348020507544	1.83738067325406251	21.11369146357915128	6.41311820880607986	10.12657494862463459
+ENSG00000006042	1.00000000000000000	2.08885017421602459	1.00000000000000000	1.00000000000000000	5.39302234046988094	1.00000000000000000
+ENSG00000006534	3.85089398029630603	24.39598822417171675	50.93073367917334338	1.00000000000000000	3.18446308749698792	1.00000000000000000
+ENSG00000006555	1.00000000000000000	1.30601628006609949	1.00000000000000000	6.41301506864299675	1.00000000000000000	1.98309083759338911
+ENSG00000006638	7.51794977477514959	1.00000000000000000	2.08993226639278973	4.17422026462078843	7.98064403528043176	1.00000000000000000
+ENSG00000007062	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	11.96987901491421979	1.00000000000000000
+ENSG00000007237	5.17497796842900115	39.38601520371219067	107.95470337094623403	30.32098637728710600	23.64323604125763723	6.25770346315457715
+ENSG00000007264	6.44212005900068441	8.10703884246290585	1.00000000000000000	372.39083379390058326	60.57109038086046127	43.03383876753865422
+ENSG00000007312	275.74354802330736902	6.79703508946422286	18.69003698184843287	24.43356509480708283	10.46358678755065696	6.70078565671091297
+ENSG00000007350	1.00000000000000000	1.77308992881153249	1.00000000000000000	19.49841971284646647	10.56022944550670850	5.44355161725131431
+ENSG00000008394	1.00000000000000000	42.16071932718114113	81.31021503211547952	1.00000000000000000	9.81529380094514359	1.00000000000000000
+ENSG00000008517	26.90388348862050449	37.19631225756344151	56.17408234039621107	622.50071107831024619	455.43051174880190501	860.09960054162252163
+ENSG00000010327	1.00000000000000000	10.82166997851214241	33.05501940427479468	2.23031496062991597	5.45235975066785450	1.99641291351135441
+ENSG00000010610	2.56006240249610117	107.78057052268347604	106.37876637857276307	3.30946882217090455	26.80582934104469217	47.06438503767019199
+ENSG00000010671	66.92650538631805546	39.89661035937692901	32.85744369648870844	2.02923013585837353	20.73819930839367842	4.88198757763974367
+ENSG00000011332	3.04164965291955225	2.11052014536007793	1.00000000000000000	1.00000000000000000	9.38234662452847878	1.00000000000000000
+ENSG00000011422	22.74770221087622346	620.54403848665856458	1444.66200879821826675	47.27378196950864719	128.24156486637411945	19.84334070045861154
+ENSG00000011600	71.27300669552936085	1849.80209665571237565	3946.33937537125757444	1523.78151024512794720	630.05391230240957157	88.36957635567394220
+ENSG00000012124	115.33519614471785530	4.67176820005146531	10.55404873774828900	1.00000000000000000	6.75995208639049050	1.00000000000000000
+ENSG00000012779	40.54310208470489840	55.52836509597482006	84.21036587305341925	1.00000000000000000	34.38166236159231204	3.04070721397928923
+ENSG00000013016	7.27889502952456624	1.00000000000000000	1.85499316005471937	3.42503595844259356	10.55104260267316896	1.00000000000000000
+ENSG00000013503	6.97192102217731691	1.46433878157503705	2.56103987117273446	4.42358652067011526	19.03735088026355982	4.77292396764212601
+ENSG00000013588	1.00000000000000000	6.24124614199215078	1.84602368866328259	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000013725	16.86649614441129685	9.67836382998532585	8.23418812717901716	42.11581275798889124	133.83541714575079595	253.60814009242409384
+ENSG00000014257	1.00000000000000000	15.19319979189611480	10.35444704338425304	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000014914	2.04755918709406703	26.15168043042055146	39.24520215569349801	1.00000000000000000	2.45818590051534791	5.97316434172111510
+ENSG00000015475	13.36731895496995826	383.32130509368352023	331.77808887073018695	92.05515284141134202	65.47538015830524216	22.69479518590503275
+ENSG00000018280	17.21182410022730025	71.23313463622703523	597.73775033987692495	16.84877135247692692	85.84516522143383099	13.49159134648694547
+ENSG00000019144	2.05042016806722582	10.37579197902304173	6.48424261259648649	1.00000000000000000	1.90612540775643380	1.91207588471360390
+ENSG00000019169	1.00000000000000000	11.01497500447915456	31.35995039589245081	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000019582	24756.75513389848129009	22885.91421652762073791	5520.37216781001188792	1480.54259044058790096	2243.46395774117308974	859.60022106866972535
+ENSG00000021300	1.83963056255247404	1.42859591976684364	1.40584415584415412	1.00000000000000000	3.90554138507856541	24.43125953249957050
+ENSG00000021762	1.00000000000000000	9.10447962969648650	9.29992176919369307	46.98830973251804011	20.46757965166163018	9.70945761548808584
+ENSG00000022267	3.95088058679970855	8.14447731487288706	1.00000000000000000	7.18749419792666622	58.81706398356590881	12.20736171806591841
+ENSG00000023171	1.00000000000000000	48.76210674224347486	17.65648593999079097	18.91408283958226022	17.58416201631859010	12.99190078202422782
+ENSG00000025708	24.45609229747632796	311.45703849774969285	671.18405769535820582	25.68827573127530428	80.23828272189999211	24.81557281093256506
+ENSG00000026559	6.13134660592193992	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000026751	7.10538190157621408	20.43268846553016616	9.90696795049049683	39.82776630105384186	2.06609808102345438	9.07009226506936272
+ENSG00000027075	19.62608314423459532	13.22044210598931002	11.62280682031002321	225.52135279618866548	112.34775049582417239	148.21138823833626930
+ENSG00000027869	5.54884884728585526	2.98122592745891790	3.04829122043068201	191.32080551692126846	37.57820056500200678	37.81657990013360404
+ENSG00000030419	4.42279615688000494	1.26678049301035101	1.00000000000000000	19.30327563130710899	4.16490694534675043	5.77450247862781652
+ENSG00000030582	40.20848471042020833	575.87536160106674288	465.85361289633061688	34.17217435526814029	53.32241365497024788	12.46279234943969527
+ENSG00000034053	2.82548375319460021	1.96781645011394546	2.41419042841045917	32.30672308615150712	22.77714663513599902	33.48156698178753032
+ENSG00000035720	63.59667263036401863	3.12791063652087242	1.64750064750064751	4.66070722828088702	7.17866794663570040	2.28865979381443019
+ENSG00000035862	2.05842506350550503	35.07252745698371399	96.40968144571434095	2.44634075788254801	30.38648662877469064	1.97106234220236964
+ENSG00000036448	6.97371565113501468	2.98920943912025505	1.00000000000000000	132.07545290826905671	5.00392151286203291	6.01863267025622850
+ENSG00000036530	1.00000000000000000	15.37743463507822383	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000038427	14.03373279645255245	255.38347287854602996	596.99437228582257831	11.55365577733182114	57.41389677515567058	9.35520252812471576
+ENSG00000038945	1.00000000000000000	4.16899033903939475	15.74057679894867157	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000039068	1.00000000000000000	7.42964500770957237	1.90025207057976142	1.00000000000000000	2.89681335356599767	1.00000000000000000
+ENSG00000041353	1.00000000000000000	1.38411308289160306	1.00000000000000000	23.01406867112827470	16.93927559536294680	6.30886157132061420
+ENSG00000042493	75.03624600953563117	325.04692677062752182	228.86867753025777006	13.01993105299740350	88.89756557160096406	9.98015671250304059
+ENSG00000042980	142.90382981705087673	30.01230505764790379	7.60435604987120506	6.89158229714800097	11.44330419953459632	2.04231811548884767
+ENSG00000046653	2.55860349127182207	17.67256928101438973	1.00000000000000000	1.00000000000000000	2.15233924867481008	1.00000000000000000
+ENSG00000047597	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	4.58166658798474735	1.00000000000000000
+ENSG00000047648	4.14864582453476061	4.04645798778847077	5.21190563372897486	1.00000000000000000	12.33487357703379672	1.00000000000000000
+ENSG00000048028	25.04452125906929183	3.58763145827096075	4.35090483863475974	22.64933802070092028	2.58782371406960232	3.89064149523194791
+ENSG00000048462	6.41125450209541992	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000048471	161.18379366749630321	54.57815574962718586	60.07806733641882602	28.67122441481824779	31.60418440964822651	27.42586428182359981
+ENSG00000049192	3.81909531404720815	1.82263902599540195	1.00000000000000000	1.00000000000000000	1.75301204819277245	8.53347070363565408
+ENSG00000049247	1.00000000000000000	12.59892159275975132	11.75672355330395824	25.69520803021212529	1.00000000000000000	8.64793125501264903
+ENSG00000049249	1.00000000000000000	2.46808089635347638	3.75951683530028014	7.64659556417944231	1.49701789264413687	2.55617802676625505
+ENSG00000049768	1.70126227208976299	1.00000000000000000	1.00000000000000000	1.79176563737133909	2.69037183169313598	14.86389392143908950
+ENSG00000050030	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	4.19145513624811006	1.00000000000000000
+ENSG00000051128	4.74396337196358253	4.31202119434051845	23.30011531522321633	1.00000000000000000	1.74906367041198507	1.00000000000000000
+ENSG00000052795	1.00000000000000000	30.99895684369834825	27.55565668302073590	6.64632964467267229	5.19900187717148210	5.31026189432920415
+ENSG00000054654	53.44755246894310829	20.04282606699830183	7.97223894222921547	346.50077788793828404	140.36842643022029620	176.16813692777222400
+ENSG00000058091	26.94620887655031893	5.95472949366125537	7.98213638648307811	1.00000000000000000	3.23097512525132879	1.00000000000000000
+ENSG00000058668	8.65879602242426394	27.06286267567583437	14.66616256559944809	119.75150651921011047	58.32375422044831481	42.33996003922982965
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+ENSG00000256235	1.00000000000000000	79.09543019542856257	38.68391925353289906	12.67803134454668879	33.34999677437112808	3.14709664026120084
+ENSG00000258227	1.00000000000000000	2.34846415735090019	20.37679878709147019	1.00000000000000000	1.00000000000000000	1.00000000000000000
+ENSG00000259120	1.00000000000000000	7.79573480567444843	1.00000000000000000	1.00000000000000000	4.26647158052632403	1.00000000000000000
+ENSG00000259207	1.00000000000000000	4.27546675401244425	1.00000000000000000	1.00000000000000000	12.90364851750933184	1.00000000000000000
+ENSG00000259330	3.05424262972736527	6.34236269938580488	24.55016357386535830	1.00000000000000000	8.09232204845899084	1.00000000000000000
+ENSG00000260314	1.00000000000000000	17.96155225885235396	1.00000000000000000	1.00000000000000000	2.01461038961038996	1.00000000000000000
+ENSG00000261150	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.49701789264413532	4.70454115458724775
+ENSG00000261221	4.76720058491449450	1.84362782197299246	8.58253169831888840	1.00000000000000000	17.28804289185037035	3.64816948119728135
+ENSG00000261371	19.86352687516723492	45.67762123264999730	211.82807699519781863	30.68591255659962513	45.05179893418747383	23.07939177120896801
+ENSG00000262655	1.00000000000000000	1.33715441672285795	1.00000000000000000	1.00000000000000000	11.70650365050093811	1.00000000000000000
+ENSG00000263961	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	6.23555153171259047	1.00000000000000000
+ENSG00000264522	2.14233493260223495	1.62810124992148708	1.00000000000000000	5.84179978146502865	1.00000000000000000	2.55617802676625505
+ENSG00000265817	1.00000000000000000	1.41486890142714872	1.00000000000000000	2.33904659882163335	2.25031257814453634	6.43885495260607676
+ENSG00000266964	16.43908421817154419	3.31176457324183815	1.75426157791522019	1.00000000000000000	17.65970738441096088	7.51077408139791913
+ENSG00000269404	162.79186730252041571	156.15046867318682189	1.42767941151313016	1.00000000000000000	2.81422351233672607	3.73981775201098987
+ENSG00000271447	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	8.65898255008208473	4.48836153780979252
+ENSG00000271503	69.80243199414573496	64.17562021681374063	96.98344838777343568	3394.29096512718069789	525.22179599606613465	960.97459522136500709
+ENSG00000271605	8.62397671966124868	29.25738129725475289	21.89183360322109806	1.00000000000000000	14.07680310349653752	2.85873605947955634
+ENSG00000272398	80.36922810051086685	1.85645769099006497	1.00000000000000000	2.66777851901266860	2.58077774264938409	1.00000000000000000
+ENSG00000273749	2.89465706707085868	22.25477925367050958	28.69949311457831698	2.77053824362605505	7.22883132195823386	2.09721307877989949
+ENSG00000274997	2.56347717323327284	1.00000000000000000	2.55911467694672146	3.74843573351647308	5.33108638474095553	13.68244337899539431
+ENSG00000275302	32.34057328451268631	105.44745734244177982	1334.32193088754843302	2619.43937939033639850	181.01562350192821782	169.24025306334087304
+ENSG00000275714	5.58935623774206114	2.57219456511380162	5.09165302782324591	25.72410037701929397	12.89224323518700821	16.18753491688445223
+ENSG00000275896	1.00000000000000000	1.00000000000000000	1.00000000000000000	1.00000000000000000	24.03998542341443212	1.00000000000000000
+ENSG00000276070	15.16959386061177284	63.93265448194564016	676.34086596308418393	215.45212676799260976	70.29665959117221519	25.38140833642240679
+ENSG00000276368	1.00000000000000000	1.81610621835810226	1.00000000000000000	2.66777851901266416	1.90106325464047599	12.31345074645384408
+ENSG00000276600	1.00000000000000000	5.40370610427897891	1.00000000000000000	1.00000000000000000	1.30625995344848711	1.00000000000000000
+ENSG00000276644	1.00000000000000000	9.08209119642530993	1.00000000000000000	1.00000000000000000	4.80161149825838685	1.00000000000000000
+ENSG00000277443	84.52545488233414517	44.99314558605141201	232.79800623337305865	3.03583061889251171	15.67836448422776918	3.35631925389471641
+ENSG00000277632	20.74497851790140501	122.66295375063337758	1214.59947520322702985	336.12430232689854392	128.60975115081384956	16.51144590128140521
+ENSG00000278828	2.82149362477231502	5.40191448507932748	2.58807695448697839	1.00000000000000000	34.87247955094309049	5.34290444505877105
+ENSG00000283361	1.00000000000000000	1.00000000000000000	1.00000000000000000	6.65870860718642632	1.00000000000000000	4.37638823916697195
+ENSG00000284194	7.01126294054999910	47.07155054423638063	93.03218716194864157	13.74760208487110802	26.99023920742775928	4.61923368476540919
diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt
new file mode 100644
index 0000000000000000000000000000000000000000..e52e2032a16c79ccce64c632dfc133eccc9fefc3
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_refsample_inferred_phenoclasses.txt
@@ -0,0 +1,6 @@
+B cell	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
+DC	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
+Monocyte	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2
+NK cell	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2	2	2	2	2	2
+Other	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1	2	2	2	2	2
+T cell	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1
diff --git a/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt
new file mode 100644
index 0000000000000000000000000000000000000000..309d802d1c56c49338bbd9a386687c6863397fdc
--- /dev/null
+++ b/paper-releases/pbisc-diffusion/updates/20261008T022410Z-deconv-scsemi-deck/diffusion/dataset/server_1/model8/plans/bayesprism_paired_20261006/cibersortx/immicro/cv2/out_fractions/CIBERSORTx_sigmatrix_Adjusted.txt
@@ -0,0 +1,1763 @@
+GeneSymbol	B cell	DC	Monocyte	NK cell	Other	T cell
+ENSG00000000938	83.56810765553996134	345.10784709310530616	687.39839595968044250	203.18139579133739403	140.11894862147227059	44.50909916667964694
+ENSG00000000971	0.00000000000000000	1.54090291079083164	0.59163079504522831	0.00000000000000000	6.38802148701124484	5.88270099378988665
+ENSG00000002933	3.43593763847591216	27.84083661109458063	177.36305224843144401	3.18103102692508477	10.14528608712192081	2.15097509851741675
+ENSG00000003096	0.00000000000000000	0.15671703087112909	0.00692390404112749	0.00000000000000000	2.47162635688909971	0.00000000000000000
+ENSG00000003147	0.00000000000000000	1.41412942140976572	2.47294669540859502	0.81577775245704209	8.87820116836937956	1.92415200752070792
+ENSG00000003249	10.56094350862881726	0.86005092411807305	0.00000000000000000	0.40590115597142024	1.36573981572765590	0.71496264868563741
+ENSG00000003436	0.53200540133681173	2.33789258895716356	1.15945919200435443	0.35942636274796369	9.94499663615401452	0.00000000000000000
+ENSG00000004468	21.85982607656594112	16.29505842774225144	15.52921637470604388	93.44470344166248310	25.67700678541353199	11.98484747495182923
+ENSG00000004660	19.78048458479049287	31.23542566086673844	21.33175073031517499	0.00000000000000000	3.75407049131432125	4.24781425518435096
+ENSG00000005187	32.63038809087863967	0.97513229179985128	1.19094727503488373	0.45683735160720962	11.13868384860784566	2.60201289441740435
+ENSG00000005238	16.87498144530281508	48.07044179347123958	102.67194657743594632	12.06014937804257414	11.10594542119096140	9.62989703743479808
+ENSG00000005249	4.31136396724061388	20.05653363996183458	15.70840121806871359	1.84251853166288959	43.88482410748714102	1.34664259476886783
+ENSG00000005379	13.32514192567299638	28.63950184190898440	5.71754631500741173	101.43873649493446010	10.70585689931048279	17.03920553602268484
+ENSG00000005381	0.00000000000000000	0.00000000000000000	5.60137422082195613	3.37643654692875517	15.74761947437718312	1.26154211228123758
+ENSG00000005471	14.83874699906060002	3.13856776608700061	1.21832040112655093	0.33647053962000839	2.01671108457661896	0.00000000000000000
+ENSG00000005961	5.21209989136546969	3.72164597066826941	5.13457115789848029	3.40977585202328237	54.30361458637688088	0.24236558696250549
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+ENSG00000006042	0.00000000000000000	0.20607731172380822	0.00000000000000000	0.01092202139487189	2.51739879277411394	0.00000000000000000
+ENSG00000006534	14.41928841483199797	49.67646390490576636	115.55790866372984738	12.89502801775472207	7.38532814866291876	3.27598725047778538
+ENSG00000006555	2.14442676109465991	1.16690846344631227	0.00000000000000000	7.98187439500593676	2.51300125742086911	0.67516788968867913
+ENSG00000006638	3.36940021419377711	0.45721724987557272	0.80794527741997324	1.10181547239361022	6.77985120466523927	0.00000000000000000
+ENSG00000007062	0.17770689485811750	0.00000000000000000	0.00000000000000000	0.13188371913122740	5.60792064997938589	0.00000000000000000
+ENSG00000007237	32.15121202772601805	107.53915899356761088	261.28992937457769585	83.99586613900224563	81.43431492664839766	24.45844237085329098
+ENSG00000007264	16.09614045168030216	17.72887853646674827	26.82743422482570850	368.49561349734540272	67.43807720088993563	56.27857826216391146
+ENSG00000007312	93.38018898303297988	6.00288339326009357	11.36928204578523527	13.66642901165780266	4.60525740762037206	2.55164603355699438
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+ENSG00000008394	2.73414174992331915	25.49137922491579289	52.05304561570378752	0.00455054566511028	9.81087010683310545	0.28830507265503208
+ENSG00000008517	37.51616280241931634	31.62245208864894508	69.50477814995468862	363.65133337824642012	267.34214530443745161	482.99842063109252877
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+ENSG00000010610	27.47727359746079046	252.74268919277400869	242.54770461795155256	37.68208420079869114	78.74932458153571702	119.20743081493817783
+ENSG00000010671	87.13839577524358049	63.50488419002473250	46.02425657060091879	9.86281860473554062	28.14417648199259858	8.71965716220237219
+ENSG00000011332	0.31656066595998422	0.53542107461221278	0.00000000000000000	0.00000000000000000	3.52487588774174387	0.00000000000000000
+ENSG00000011422	80.22800300360725601	806.62176387425677149	1605.09281767836250765	111.04520389371954536	224.75816378696760012	52.38415847406148629
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+ENSG00000012779	80.00593677864652875	98.63460073045827414	161.42847728097393656	22.01771016766948819	68.07383490175868701	14.26272075541258921
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+ENSG00000013503	5.55029858047782731	2.83725979688570762	3.61373663471320139	5.86233201281549121	13.09868582415308680	2.82828295384370465
+ENSG00000013588	2.04220127161661003	10.99525188896286387	1.57135881584275028	0.00000000000000000	0.00000000000000000	0.47359505135758478
+ENSG00000013725	71.13627403551902262	38.08841211045888286	60.34441523899158000	117.35007189665758176	246.33970579612881124	461.41632319649738747
+ENSG00000014257	2.04719971825601599	19.26681294139469003	16.57886351661075608	3.96281587112522260	5.97692035165150859	1.37199027536156848
+ENSG00000014914	3.79818636752761707	31.81181608387537807	46.44888940665163801	0.68514021294432415	8.15049222761171777	5.66802965766240963
+ENSG00000015475	21.77845579463851422	328.67123232028677648	291.61005684316717179	89.46173753422561958	74.40026590514702320	36.48831431494036082
+ENSG00000018280	79.19475339726351137	152.32366489731910519	1054.36378783682857829	78.85488435248261396	174.63804442328748223	49.69994548641469123
+ENSG00000019144	0.60122874472060006	14.41294923565677699	8.94723063268332020	1.56005364590204598	1.61052824262349437	1.09243768018295540
+ENSG00000019169	2.63681351120714913	17.05570793658159445	45.62114786371427044	1.08447007217912272	1.12642124047277914	1.61984482815490849
+ENSG00000019582	15025.59136546250556421	13457.34994723320050980	4966.43515003294214694	2769.69828568907223598	2031.01474693733916865	1160.46992189336401680
+ENSG00000021300	1.24589516703883607	4.66522549628146521	1.22485178501081071	1.28725289415837429	9.77814285589587939	36.32645893041781449
+ENSG00000021762	0.53073577936520644	18.02535064690995981	22.29959528587438200	90.89957541403157393	36.71089440696640338	17.18068254167586772
+ENSG00000022267	3.38865713309535366	6.28285044289580785	2.57390246996819760	7.78185108270301829	52.69177010350021106	9.09506985888164898
+ENSG00000023171	3.09128889638887960	53.96135276222102561	22.11092303949186189	28.97669015684465066	16.37686457759296133	13.08060488236564467
+ENSG00000025708	53.67542559313805839	338.62327840828555736	703.99554130870558311	76.03100434825461207	85.21870047603025000	41.71054927327521256
+ENSG00000026559	4.15861139749067110	0.04366812427721148	0.00000000000000000	0.00000000000000000	0.23649994597109064	0.00000000000000000
+ENSG00000026751	10.06104862722520465	37.54827439400533962	12.39985114091764018	65.99016685843908192	4.87471586186017003	15.42341418806755726
+ENSG00000027075	39.41310272556626870	36.19586453616971511	47.81195753056526598	300.08625223874975063	173.89186960511767666	205.10357090186346340
+ENSG00000027869	8.78915771102134613	10.45552596367226350	10.08821419930905705	193.38370929340862858	40.02172591243299138	40.52331685361642144
+ENSG00000030419	7.87887336391132109	0.50447932306203724	1.20432065356484719	24.78716841650398806	11.26899777526370805	9.67460225477896074
+ENSG00000030582	114.08936872587572964	881.83293967356860321	820.95702393782664785	120.41937314745379695	126.99363928208565255	36.79138112699578755
+ENSG00000034053	7.21916664952871212	5.62757651218253496	18.12395469988998897	71.21907255404651949	37.10484480091844262	70.72207983727365388
+ENSG00000035720	40.84382025132909888	0.75124562861119026	4.46519742176234047	5.75346167211771142	4.55882921996023516	1.50983930478086603
+ENSG00000035862	16.88211800212961933	70.51992114989320726	169.17136169368771448	20.44863613448042017	48.53931557916516937	7.76498324107307436
+ENSG00000036448	0.00000000000000000	0.00000000000000000	0.00000000000000000	150.90267630176225566	4.09608070205314156	7.86988326787111436
+ENSG00000036530	0.03054229404612979	10.06117646805093990	0.00000000000000000	0.01855247718282899	0.74550712181301382	0.00000000000000000
+ENSG00000038427	90.67518902367862665	599.31406467708109176	1417.60418796060844215	59.88355577188984569	192.22511313421355794	37.34595445743917708
+ENSG00000038945	1.97111829401380922	6.12956144013205328	21.31053336069293280	0.65512186354514546	0.24797647076336990	0.51618522324521288
+ENSG00000039068	0.30622416101002536	6.03241163214747633	0.49391268294101714	0.00000000000000000	1.23576674106345585	0.00000000000000000
+ENSG00000041353	1.21340283809720439	0.00000000000000000	1.57295635964093883	20.71199331303800051	13.78976700349153361	4.01344083617274894
+ENSG00000042493	80.51216516571261650	272.55417344150492909	207.85935093286732922	29.53247729534800925	74.69683367568644883	20.88811755060665121
+ENSG00000042980	122.44215867848517121	29.60931527256552442	17.34856650480154272	16.12083454831261875	15.50948446074184872	3.52879804493433369
+ENSG00000046653	0.55765879416135966	6.96120587183021566	0.00000000000000000	0.73662935743425961	0.32375048549561697	0.43652369157233939
+ENSG00000047597	0.07249534741519283	0.00000000000000000	0.03392350247780974	0.73222304862335075	4.45812319785545341	0.00000000000000000
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