#!/usr/bin/env python3 """Build a portable Harbor task + rootless Apptainer runtime release. This packager is intentionally distinct from the Gate-1-clean SWEGym/R2EGym packagers. It supports datasets without reference solutions, but records that limitation explicitly and never labels such a release Gate-1-clean. """ from __future__ import annotations import argparse import hashlib import io import json import os import shutil import subprocess import tarfile import tempfile from pathlib import Path, PurePosixPath from stat import S_ISLNK, S_ISREG from typing import Any import pyarrow as pa import pyarrow.parquet as pq import zstandard as zstd CORE_FILES = ("task.toml", "instruction.md", "environment/Dockerfile", "tests/test.sh") def parse_args() -> argparse.Namespace: parser = argparse.ArgumentParser(description=__doc__) parser.add_argument("--release-id", required=True) parser.add_argument("--release-label", required=True) parser.add_argument("--hf-repo", required=True) parser.add_argument("--tasks", required=True, type=Path) parser.add_argument("--source-parquet", required=True, type=Path) parser.add_argument("--upstream-repo", required=True) parser.add_argument("--upstream-revision", required=True) parser.add_argument("--upstream-subdirectory") parser.add_argument("--sif-cache", required=True, type=Path) parser.add_argument("--output", required=True, type=Path) parser.add_argument("--license", default="other") parser.add_argument("--expected-source-tasks", required=True, type=int) parser.add_argument("--expected-compatible-tasks", required=True, type=int) parser.add_argument("--allow-offline-test-patch", action="store_true") parser.add_argument("--runtime-evidence", action="append", default=[]) parser.add_argument("--validation-note", required=True) parser.add_argument("--harbor-root", type=Path) parser.add_argument("--overfit-count", type=int, default=64) parser.add_argument("--diagnostic-count", type=int, default=64) parser.add_argument("--release-date", default="2026-09-24") return parser.parse_args() def sha256_bytes(value: bytes) -> str: return hashlib.sha256(value).hexdigest() def sha256_file(path: Path) -> str: digest = hashlib.sha256() with path.open("rb") as stream: for block in iter(lambda: stream.read(8 * 1024 * 1024), b""): digest.update(block) return digest.hexdigest() def sha256_text(value: str) -> str: return sha256_bytes(value.encode()) def docker_build_context_hash(context: Path, dockerfile: Path) -> str: """Mirror Harbor's stable 64-bit BLAKE2 build-context cache key.""" entries: list[Path] = [] for root, dirs, files in context.walk(top_down=True, follow_symlinks=False): dirs.sort() entries.extend(root / name for name in sorted(files)) digest = hashlib.blake2b(digest_size=8) digest.update(dockerfile.name.encode()) digest.update(dockerfile.read_bytes()) for path in entries: stat = path.lstat() digest.update(str(path.relative_to(context)).encode()) digest.update(stat.st_mode.to_bytes(4, "little")) digest.update(stat.st_size.to_bytes(8, "little")) if S_ISLNK(stat.st_mode): digest.update(os.readlink(path).encode()) elif S_ISREG(stat.st_mode): digest.update(path.read_bytes()) return digest.hexdigest() def write_jsonl(path: Path, rows: list[dict[str, Any]]) -> None: path.write_text("".join(json.dumps(row, sort_keys=True) + "\n" for row in rows)) def normalized_member_name(name: str) -> str: parts = [part for part in PurePosixPath(name).parts if part not in ("", ".")] if parts and parts[0] == "tasks": parts = parts[1:] return PurePosixPath(*parts).as_posix() def archive_inventory(payload: bytes) -> dict[str, str]: files: dict[str, str] = {} with tarfile.open(fileobj=io.BytesIO(payload), mode="r:*") as archive: for member in archive.getmembers(): if not member.isfile(): continue name = normalized_member_name(member.name) if not name: continue stream = archive.extractfile(member) if stream is None: raise RuntimeError(f"cannot extract {member.name}") files[name] = sha256_bytes(stream.read()) return files def local_inventory(task: Path) -> dict[str, str]: root = task.resolve() return { path.relative_to(root).as_posix(): sha256_file(path) for path in sorted(root.rglob("*")) if path.is_file() } def source_rows(path: Path) -> dict[str, tuple[bytes, dict[str, str]]]: parquet = pq.ParquetFile(path) rows: dict[str, tuple[bytes, dict[str, str]]] = {} for row_group in range(parquet.num_row_groups): table = parquet.read_row_group(row_group, columns=["path", "task_binary"]) for row in table.to_pylist(): task_id = str(row["path"]) if task_id in rows: raise RuntimeError(f"duplicate source task: {task_id}") payload = bytes(row["task_binary"]) rows[task_id] = (payload, archive_inventory(payload)) return rows def add_tar_entry(archive: tarfile.TarFile, path: Path, arcname: str) -> None: info = archive.gettarinfo(str(path), arcname=arcname) info.uid = info.gid = 0 info.uname = info.gname = "" info.mtime = 0 if path.is_file(): with path.open("rb") as stream: archive.addfile(info, stream) else: archive.addfile(info) def deterministic_task_tar(task: Path) -> bytes: root = task.resolve() payload = io.BytesIO() with tarfile.open(fileobj=payload, mode="w", format=tarfile.PAX_FORMAT) as archive: for path in sorted(root.rglob("*")): add_tar_entry(archive, path, path.relative_to(root).as_posix()) return payload.getvalue() def write_tasks_archive(tasks: Path, task_ids: list[str], output: Path) -> None: compressor = zstd.ZstdCompressor(level=19, threads=0) with output.open("wb") as raw: with compressor.stream_writer(raw, closefd=False) as compressed: with tarfile.open(fileobj=compressed, mode="w|", format=tarfile.PAX_FORMAT) as archive: for task_id in task_ids: root = (tasks / task_id).resolve() add_tar_entry(archive, root, f"tasks/{task_id}") for path in sorted(root.rglob("*")): add_tar_entry( archive, path, f"tasks/{task_id}/{path.relative_to(root).as_posix()}", ) def stable_order(task_ids: list[str], seed: str) -> list[str]: return sorted( task_ids, key=lambda task: (sha256_text(f"{seed}\0{task}"), task), ) def copy_large_file(source: Path, target: Path) -> None: try: os.link(source, target) except OSError: shutil.copy2(source, target) def runtime_provenance(harbor_root: Path | None, output: Path) -> dict[str, Any] | None: if harbor_root is None: return None root = harbor_root.resolve() revision = subprocess.run( ["git", "rev-parse", "HEAD"], cwd=root, check=True, capture_output=True, text=True ).stdout.strip() patch = subprocess.run( ["git", "diff", "--binary"], cwd=root, check=True, capture_output=True ).stdout patch_path = output / "harbor-runtime.patch" patch_path.write_bytes(patch) return { "repository": "harbor", "revision": revision, "dirty_patch": patch_path.name, "dirty_patch_sha256": sha256_bytes(patch), "dirty_patch_bytes": len(patch), } def write_materializer(path: Path) -> None: path.write_text( '''#!/usr/bin/env python3 """Materialize Harbor task and SIF-cache views from this release.""" import argparse import json import os import subprocess import tempfile from pathlib import Path parser = argparse.ArgumentParser() parser.add_argument("--release", type=Path, default=Path(__file__).resolve().parents[1]) parser.add_argument("--runtime-root", type=Path, required=True) args = parser.parse_args() release = args.release.resolve() runtime = args.runtime_root.resolve() if runtime.exists(): raise SystemExit(f"refusing to overwrite {runtime}") runtime.parent.mkdir(parents=True, exist_ok=True) with tempfile.TemporaryDirectory(prefix="harbor-runtime-", dir=runtime.parent) as temporary: stage = Path(temporary) / "runtime" stage.mkdir() subprocess.run( ["tar", "--use-compress-program=zstd", "-xf", str(release / "tasks.tar.zst"), "-C", str(stage)], check=True, ) sif_cache = stage / "sif-cache" sif_cache.mkdir() for line in (release / "manifests" / "task-sif-routing.jsonl").read_text().splitlines(): row = json.loads(line) (sif_cache / f"{row['task_id']}.sif").symlink_to(release / row["sif_image"]) os.replace(stage, runtime) print(f"materialized runtime at {runtime}") ''' ) def write_readme( path: Path, args: argparse.Namespace, task_count: int, excluded_count: int, image_count: int, image_bytes: int, patch_count: int, ) -> None: source_location = args.upstream_repo if args.upstream_subdirectory: source_location += f"/{args.upstream_subdirectory}" patch_text = ( f" The release records **{patch_count:,}** offline-only `tests/test.sh` patches that " "neutralize redundant runtime package-download commands; verifier test logic is unchanged." if patch_count else " Task contents are byte-identical to the selected upstream task archives." ) path.write_text( "---\n" f"license: {args.license}\n" "task_categories:\n- reinforcement-learning\n" "language:\n- en\n" "tags:\n- harbor\n- apptainer\n- offline\n- agentic-coding\n" "configs:\n- config_name: default\n data_files:\n - split: train\n path: tasks.parquet\n" "---\n\n" f"# {args.release_label}: rootless Apptainer runtime release\n\n" f"This release contains **{task_count:,}** runnable Harbor tasks from " f"`{source_location}@{args.upstream_revision}` and bundles the exact aarch64 SIF images " "used on Jupiter with rootless Apptainer 1.4.5." f"{patch_text}\n\n" f"{excluded_count:,} source tasks are excluded for missing required task/verifier files. " "The source does **not** provide reference solutions, so this is a production-runtime-tested " "release rather than an all-task oracle-certified Gate-1 release. The validation summary " "preserves that distinction.\n\n" "## Contents\n\n" "- `tasks.parquet`: deterministic Harbor task payloads.\n" "- `tasks.tar.zst`: materialized task directories.\n" f"- `sif-images/`: {image_count} content-addressed aarch64 image(s), " f"{image_bytes / (1024**3):.2f} GiB total.\n" "- `manifests/`: compatible tasks, routing, exclusions, splits, and patches.\n" "- `validation/summary.json`: exact validation scope and limitations.\n" "- `scripts/materialize_release.py`: fresh runtime materializer.\n" "- `SHA256SUMS`: checksums for every published file.\n\n" "## Use with Harbor\n\n" "```bash\n" f"hf download {args.hf_repo} --repo-type dataset --local-dir release\n" "cd release && sha256sum -c SHA256SUMS\n" "python scripts/materialize_release.py --runtime-root runtime\n" "harbor run -p runtime/tasks -e apptainer --environment-kwarg sif_cache=$PWD/runtime/sif-cache ...\n" "```\n\n" "The images are **aarch64**, not x86_64. See `dataset_manifest.json` and `provenance/` " "for immutable source and Harbor-runtime details.\n" ) def main() -> int: args = parse_args() tasks = args.tasks.resolve() source_parquet = args.source_parquet.resolve() sif_cache = args.sif_cache.resolve() output = args.output.resolve() if output.exists(): raise SystemExit(f"refusing to overwrite {output}") upstream = source_rows(source_parquet) if len(upstream) != args.expected_source_tasks: raise SystemExit( f"source task count mismatch: expected {args.expected_source_tasks}, found {len(upstream)}" ) local_ids = {path.name for path in tasks.iterdir() if path.is_dir()} extra_local = sorted(local_ids - upstream.keys()) if extra_local: raise SystemExit(f"local tasks absent upstream: {extra_local[:10]}") decisions: list[dict[str, Any]] = [] patches: list[dict[str, Any]] = [] compatible: list[dict[str, Any]] = [] sif_by_source: dict[Path, dict[str, Any]] = {} for task_id in sorted(upstream): task = (tasks / task_id).resolve() missing = [name for name in CORE_FILES if not (task / name).is_file()] if missing: decisions.append( {"task_id": task_id, "decision": "excluded", "reason": "missing_core_files", "missing": missing} ) continue current = local_inventory(task) original = upstream[task_id][1] all_paths = sorted(set(current) | set(original)) changes = [name for name in all_paths if current.get(name) != original.get(name)] if changes: allowed = args.allow_offline_test_patch and changes == ["tests/test.sh"] marker_present = "patched-offline:" in (task / "tests/test.sh").read_text(errors="replace") if not allowed or not marker_present: raise RuntimeError(f"unexpected local changes for {task_id}: {changes}") patches.append( { "task_id": task_id, "path": "tests/test.sh", "operation": "neutralize_redundant_network_install_commands", "source_sha256": original.get("tests/test.sh"), "release_sha256": current.get("tests/test.sh"), } ) dockerfile = task / "environment" / "Dockerfile" docker_sha = sha256_file(dockerfile) context_hash = docker_build_context_hash(dockerfile.parent, dockerfile) sif_source = sif_cache / f"build_{context_hash}.sif" if not sif_source.is_file(): raise FileNotFoundError(f"missing SIF for {task_id}: {sif_source}") if sif_source not in sif_by_source: sif_sha = sha256_file(sif_source) sif_by_source[sif_source] = { "source": str(sif_source), "sha256": sif_sha, "size": sif_source.stat().st_size, "path": f"sif-images/{sif_sha[:16]}--{sif_source.name}", } tree_text = "".join(f"{name}\0{digest}\n" for name, digest in sorted(current.items())) compatible.append( { "task_id": task_id, "task_tree_sha256": sha256_text(tree_text), "dockerfile_sha256": docker_sha, "docker_build_context_hash": context_hash, "sif_image": sif_by_source[sif_source]["path"], "sif_sha256": sif_by_source[sif_source]["sha256"], } ) decisions.append({"task_id": task_id, "decision": "accepted", "reason": "runtime_compatible"}) if len(compatible) != args.expected_compatible_tasks: raise SystemExit( f"compatible task count mismatch: expected {args.expected_compatible_tasks}, found {len(compatible)}" ) task_ids = [row["task_id"] for row in compatible] task_id_text = "".join(f"{task_id}\n" for task_id in task_ids) overfit_ids = stable_order(task_ids, f"{args.release_id}-overfit-v1")[: args.overfit_count] overfit = set(overfit_ids) diagnostic_ids = stable_order( [task_id for task_id in task_ids if task_id not in overfit], f"{args.release_id}-diagnostic-v1", )[: args.diagnostic_count] diagnostic = set(diagnostic_ids) try: for name in ("sif-images", "manifests", "provenance", "scripts", "validation"): (output / name).mkdir(parents=True, exist_ok=True) for source, row in sif_by_source.items(): copy_large_file(source, output / row["path"]) for row in compatible: row["in_overfit_train"] = row["task_id"] in overfit row["in_diagnostic_validation"] = row["task_id"] in diagnostic write_jsonl(output / "manifests" / "compatible.jsonl", compatible) write_jsonl( output / "manifests" / "task-sif-routing.jsonl", [{key: row[key] for key in ("task_id", "sif_image", "sif_sha256")} for row in compatible], ) write_jsonl(output / "manifests" / "source-task-decisions.jsonl", decisions) write_jsonl(output / "manifests" / "offline-patches.jsonl", patches) write_jsonl( output / "manifests" / "overfit-train.jsonl", [{"task_id": task_id, "rank": rank} for rank, task_id in enumerate(overfit_ids, 1)], ) write_jsonl( output / "manifests" / "diagnostic-validation.jsonl", [{"task_id": task_id, "rank": rank} for rank, task_id in enumerate(diagnostic_ids, 1)], ) (output / "manifests" / "task-ids.txt").write_text(task_id_text) write_jsonl(output / "manifests" / "sif-images.jsonl", list(sif_by_source.values())) schema = pa.schema( [ ("path", pa.string()), ("task_binary", pa.binary()), ("task_id", pa.string()), ("instruction", pa.string()), ("sif_image", pa.string()), ("in_overfit_train", pa.bool_()), ("in_diagnostic_validation", pa.bool_()), ] ) route_by_task = {row["task_id"]: row for row in compatible} with pq.ParquetWriter(output / "tasks.parquet", schema, compression="zstd", use_dictionary=False) as writer: for offset in range(0, len(task_ids), 32): rows = [] for task_id in task_ids[offset : offset + 32]: task = (tasks / task_id).resolve() rows.append( { "path": task_id, "task_binary": deterministic_task_tar(task), "task_id": task_id, "instruction": (task / "instruction.md").read_text(errors="replace"), "sif_image": route_by_task[task_id]["sif_image"], "in_overfit_train": task_id in overfit, "in_diagnostic_validation": task_id in diagnostic, } ) writer.write_table(pa.Table.from_pylist(rows, schema=schema)) write_tasks_archive(tasks, task_ids, output / "tasks.tar.zst") provenance = { "schema_version": 1, "upstream_repo": args.upstream_repo, "upstream_revision": args.upstream_revision, "upstream_subdirectory": args.upstream_subdirectory, "source_parquet_sha256": sha256_file(source_parquet), "source_task_count": len(upstream), "release_task_count": len(task_ids), "release_task_ids_sha256": sha256_text(task_id_text), "local_source": str(tasks), } (output / "provenance" / "source.json").write_text( json.dumps(provenance, indent=2, sort_keys=True) + "\n" ) harbor = runtime_provenance(args.harbor_root, output / "provenance") validation = { "schema_version": 1, "profile": "jupiter-apptainer-1.4.5-aarch64-rootless-offline-v1", "status": "production_runtime_tested_gate1_provisional", "task_count": len(task_ids), "static_source_comparison": "pass", "missing_core_exclusions": len(upstream) - len(task_ids), "oracle_available": False, "oracle_attempts": 0, "negative_control_scope": "not_complete_all_tasks", "runtime_evidence": args.runtime_evidence, "note": args.validation_note, } (output / "validation" / "summary.json").write_text( json.dumps(validation, indent=2, sort_keys=True) + "\n" ) manifest = { "schema_version": 1, "id": args.release_id, "release_label": args.release_label, "release_date": args.release_date, "status": validation["status"], "publication": {"hf_repo": args.hf_repo, "revision": None}, "license": args.license, "task_format": "harbor", "task_count": len(task_ids), "source_task_count": len(upstream), "excluded_task_count": len(upstream) - len(task_ids), "offline_patch_count": len(patches), "architectures": ["aarch64"], "sif_image_count": len(sif_by_source), "sif_image_bytes": sum(row["size"] for row in sif_by_source.values()), "task_ids_sha256": sha256_text(task_id_text), "upstream": provenance, "harbor_runtime": harbor, "validation": validation, "splits": { "compatible": len(task_ids), "overfit_train": len(overfit_ids), "diagnostic_validation": len(diagnostic_ids), }, } (output / "dataset_manifest.json").write_text( json.dumps(manifest, indent=2, sort_keys=True) + "\n" ) write_materializer(output / "scripts" / "materialize_release.py") shutil.copy2(Path(__file__), output / "scripts" / Path(__file__).name) if args.license == "apache-2.0" and args.harbor_root: shutil.copy2(args.harbor_root.resolve() / "LICENSE", output / "LICENSE") write_readme( output / "README.md", args, len(task_ids), len(upstream) - len(task_ids), len(sif_by_source), manifest["sif_image_bytes"], len(patches), ) checksums = [] for path in sorted(item for item in output.rglob("*") if item.is_file()): if path.name == "SHA256SUMS": continue checksums.append(f"{sha256_file(path)} {path.relative_to(output).as_posix()}\n") (output / "SHA256SUMS").write_text("".join(checksums)) except Exception: shutil.rmtree(output, ignore_errors=True) raise print(json.dumps(manifest, indent=2, sort_keys=True)) return 0 if __name__ == "__main__": raise SystemExit(main())