# -*- coding: utf-8 -*- """讀取 stats_fdr_results.csv,重算多重比較校正(Benjamini-Hochberg FDR 與 Bonferroni)。 用法:python compute_fdr.py (與 stats_fdr_results.csv 同目錄執行)""" import csv, os, sys try: sys.stdout.reconfigure(encoding="utf-8", errors="replace") except Exception: pass here = os.path.dirname(os.path.abspath(__file__)) path = os.path.join(here, "..", "stats_fdr_results.csv") rows = list(csv.DictReader(open(path, encoding="utf-8-sig"))) ps = [(r["code"], r["indicator"], float(r["p_raw"])) for r in rows] m = len(ps) srt = sorted(range(m), key=lambda i: ps[i][2]) # BH adjusted q-values q = [0.0]*m; prev = 1.0 for rank in range(m-1, -1, -1): i = srt[rank]; prev = min(prev, ps[i][2]*m/(rank+1)); q[i] = prev kmax = 0 for rank in range(m): if ps[srt[rank]][2] <= (rank+1)/m*0.05: kmax = rank+1 bh = set(srt[r] for r in range(kmax)) bonf = set(i for i in range(m) if ps[i][2]*m < 0.05) raw = [i for i in range(m) if ps[i][2] < 0.05] print(f"m={m} indicators; raw p<.05: {len(raw)}; BH-FDR survivors: {len(bh)}; Bonferroni: {len(bonf)}") print("\nBH-FDR survivors (alpha=.05):") for i in sorted(bh, key=lambda i: ps[i][2]): print(f" {ps[i][0]:7s} {ps[i][1]:20s} p={ps[i][2]:.4f} q={q[i]:.4f}")