#!/bin/bash # Script to automatically extract all compressed files in the dataset directories # Handles: .zip, .zip.zip, split .z01/.z02, split .001/.002, .tar.gz, split .tar.gz.00/.01, etc. # Don't exit on error - we want to continue processing even if some extractions fail # Configuration SEVENZ="/ocean/projects/cis220031p/shan1/7z/7zz" BASE_DIR="/ocean/projects/cis220031p/shan1/data_ck/deepfake_dataset/compress/test" LOG_FILE="${BASE_DIR}/extraction.log" # Colors for output RED='\033[0;31m' GREEN='\033[0;32m' YELLOW='\033[1;33m' BLUE='\033[0;34m' NC='\033[0m' # No Color # Logging function log() { echo -e "$(date '+%Y-%m-%d %H:%M:%S') - $1" | tee -a "$LOG_FILE" } log_error() { echo -e "${RED}$(date '+%Y-%m-%d %H:%M:%S') - ERROR: $1${NC}" | tee -a "$LOG_FILE" } log_success() { echo -e "${GREEN}$(date '+%Y-%m-%d %H:%M:%S') - SUCCESS: $1${NC}" | tee -a "$LOG_FILE" } log_warning() { echo -e "${YELLOW}$(date '+%Y-%m-%d %H:%M:%S') - WARNING: $1${NC}" | tee -a "$LOG_FILE" } log_info() { echo -e "${BLUE}$(date '+%Y-%m-%d %H:%M:%S') - INFO: $1${NC}" | tee -a "$LOG_FILE" } # Check if 7zz exists if [ ! -f "$SEVENZ" ]; then log_error "7zz not found at $SEVENZ" exit 1 fi # Make 7zz executable chmod +x "$SEVENZ" 2>/dev/null || true log_info "Starting extraction process..." log_info "Using 7zz at: $SEVENZ" log_info "Base directory: $BASE_DIR" cd "$BASE_DIR" || exit 1 # Track processed files to avoid duplicate processing declare -A processed_files # Function to check if file is a split archive part is_split_part() { local file="$1" # Check for .z01, .z02, etc. if [[ "$file" =~ \.(z[0-9]{2})$ ]]; then return 0 fi # Check for .001, .002, etc. if [[ "$file" =~ \.([0-9]{3})$ ]]; then return 0 fi # Check for .00, .01, etc. (for tar.gz splits) if [[ "$file" =~ \.([0-9]{2})$ ]]; then return 0 fi return 1 } # Function to extract split zip files (.z01, .z02, etc.) extract_split_zip() { local dir="$1" local base_name="$2" local first_file="${dir}/${base_name}.z01" local zip_file="${dir}/${base_name}.zip" log_info "Extracting split zip: ${base_name}.zip (.z01-.zXX format)" if [ -f "$zip_file" ]; then # Use the .zip file to extract (it contains the archive info) if "$SEVENZ" x "$zip_file" -o"${dir}/" -y >/dev/null 2>&1; then log_success "Extracted split zip: ${base_name}.zip" return 0 else log_error "Failed to extract split zip: ${base_name}.zip" return 1 fi else log_warning "Main zip file not found for split archive: ${base_name}" return 1 fi } # Function to extract split zip files (.001, .002, etc. or .zip.001, .zip.002) extract_split_zip_001() { local dir="$1" local base_name="$2" local first_file="" # Check if it's .zip.001 format if [ -f "${dir}/${base_name}.zip.001" ]; then first_file="${dir}/${base_name}.zip.001" log_info "Extracting split zip: ${base_name}.zip.001 (.zip.001-.zip.XXX format)" # Check if it's just .001 format (without .zip prefix) elif [ -f "${dir}/${base_name}.001" ]; then first_file="${dir}/${base_name}.001" log_info "Extracting split zip: ${base_name}.001 (.001-.XXX format)" else log_warning "First split file not found for: ${base_name}" return 1 fi if "$SEVENZ" x "$first_file" -o"${dir}/" -y >/dev/null 2>&1; then log_success "Extracted split zip: $(basename "$first_file")" return 0 else log_error "Failed to extract split zip: $(basename "$first_file")" return 1 fi } # Function to combine and extract split tar.gz files extract_split_targz() { local dir="$1" local base_name="$2" local output_file="${dir}/${base_name}.tar.gz" log_info "Combining and extracting split tar.gz: ${base_name}.tar.gz.00-.XX" # Find all split parts (format: base_name.tar.gz.00, .01, etc.) local parts=() local part_num=0 while [ -f "${dir}/${base_name}.tar.gz.$(printf "%02d" $part_num)" ]; do parts+=("${dir}/${base_name}.tar.gz.$(printf "%02d" $part_num)") part_num=$((part_num + 1)) done if [ ${#parts[@]} -eq 0 ]; then log_warning "No split parts found for: ${base_name}" return 1 fi log_info "Found ${#parts[@]} split parts for ${base_name}.tar.gz" # Combine split parts log_info "Combining split parts into ${base_name}.tar.gz..." cat "${parts[@]}" > "$output_file" 2>/dev/null if [ $? -eq 0 ] && [ -f "$output_file" ]; then log_success "Combined split parts into ${base_name}.tar.gz" # Extract the combined tar.gz log_info "Extracting ${base_name}.tar.gz..." if tar -xzf "$output_file" -C "$dir" 2>/dev/null; then log_success "Extracted ${base_name}.tar.gz" # Optionally remove the combined file to save space # rm "$output_file" return 0 else log_error "Failed to extract ${base_name}.tar.gz" return 1 fi else log_error "Failed to combine split parts for ${base_name}.tar.gz" return 1 fi } # Function to extract double zip files (.zip.zip) extract_double_zip() { local file="$1" local dir=$(dirname "$file") local filename=$(basename "$file") local temp_zip="${dir}/${filename%.zip}" log_warning "Found double zip file: ${filename} - will extract twice" # First extraction: .zip.zip -> .zip log_info "First extraction: ${filename} -> ${filename%.zip}" if "$SEVENZ" x "$file" -o"${dir}/" -y >/dev/null 2>&1; then log_success "First extraction completed: ${filename}" # Second extraction: .zip -> contents if [ -f "$temp_zip" ]; then log_info "Second extraction: $(basename "$temp_zip") -> contents" if "$SEVENZ" x "$temp_zip" -o"${dir}/" -y >/dev/null 2>&1; then log_success "Second extraction completed: $(basename "$temp_zip")" # Remove intermediate .zip file rm -f "$temp_zip" return 0 else log_error "Second extraction failed: $(basename "$temp_zip")" return 1 fi else log_warning "Intermediate zip file not found after first extraction" return 1 fi else log_error "First extraction failed: ${filename}" return 1 fi } # Function to extract regular zip file extract_zip() { local file="$1" local dir=$(dirname "$file") log_info "Extracting zip: $(basename "$file")" if "$SEVENZ" x "$file" -o"${dir}/" -y >/dev/null 2>&1; then log_success "Extracted: $(basename "$file")" return 0 else log_error "Failed to extract: $(basename "$file")" return 1 fi } # Function to extract regular tar.gz file extract_targz() { local file="$1" local dir=$(dirname "$file") log_info "Extracting tar.gz: $(basename "$file")" if tar -xzf "$file" -C "$dir" 2>/dev/null; then log_success "Extracted: $(basename "$file")" return 0 else log_error "Failed to extract: $(basename "$file")" return 1 fi } # Process each directory process_directory() { local dir="$1" log_info "Processing directory: $(basename "$dir")" cd "$dir" || return 1 # Track which archives we've already processed declare -A processed_archives # Find all archive files while IFS= read -r file; do local filename=$(basename "$file") local filepath="$file" # Skip if already processed if [ -n "${processed_files[$filepath]}" ]; then continue fi # Skip label files and other non-archive files if [[ "$filename" =~ \.(txt|pdf|LICENSE)$ ]]; then continue fi # Handle double zip files (.zip.zip) if [[ "$filename" =~ \.zip\.zip$ ]]; then processed_files["$filepath"]=1 extract_double_zip "$filepath" continue fi # Handle split tar.gz files with .00, .01 format (process first) if [[ "$filename" =~ \.tar\.gz\.([0-9]{2})$ ]]; then local base_name="${filename%.tar.gz.*}" if [ -z "${processed_archives["${base_name}_targz"]}" ]; then processed_archives["${base_name}_targz"]=1 extract_split_targz "$dir" "$base_name" fi continue fi # Handle split zip files with .z01, .z02 format # Process the main .zip file when we encounter it if [[ "$filename" =~ \.zip$ ]]; then local base_name="${filename%.zip}" # Check if this is part of a split archive with .z01, .z02 format if [ -f "${dir}/${base_name}.z01" ]; then if [ -z "${processed_archives["${base_name}_z01"]}" ]; then processed_archives["${base_name}_z01"]=1 extract_split_zip "$dir" "$base_name" fi continue fi fi # Handle split zip files with .zip.001, .zip.002 format if [[ "$filename" =~ \.zip\.([0-9]{3})$ ]]; then local base_name="${filename%.zip.*}" if [ -z "${processed_archives["${base_name}_zip001"]}" ]; then processed_archives["${base_name}_zip001"]=1 extract_split_zip_001 "$dir" "$base_name" fi continue fi # Handle split zip files with .001, .002 format (not .zip.001) if [[ "$filename" =~ \.([0-9]{3})$ ]] && [[ ! "$filename" =~ \.zip\.([0-9]{3})$ ]]; then local base_name="${filename%.*}" if [ -z "${processed_archives["${base_name}_001"]}" ]; then processed_archives["${base_name}_001"]=1 extract_split_zip_001 "$dir" "$base_name" fi continue fi # Handle split zip parts with .z01, .z02 (skip, already processed via main .zip) if [[ "$filename" =~ \.(z[0-9]{2})$ ]]; then continue fi # Handle regular zip files if [[ "$filename" =~ \.zip$ ]]; then # Already checked for split archives above, so this is a regular zip processed_files["$filepath"]=1 extract_zip "$filepath" continue fi # Handle regular tar.gz files (but skip if it's part of a split archive) if [[ "$filename" =~ \.tar\.gz$ ]]; then # Check if this is part of a split tar.gz local base_name="${filename%.tar.gz}" if [ -f "${dir}/${base_name}.tar.gz.00" ]; then continue fi processed_files["$filepath"]=1 extract_targz "$filepath" continue fi done < <(find . -maxdepth 1 -type f | sort) cd "$BASE_DIR" || exit 1 } # Main execution main() { log_info "=== Starting Extraction Process ===" # Create log file touch "$LOG_FILE" # Process each dataset directory for dir in "$BASE_DIR"/*/; do if [ -d "$dir" ]; then process_directory "$dir" fi done log_info "=== Extraction Process Complete ===" log_info "Log file saved at: $LOG_FILE" # Summary echo "" echo -e "${GREEN}=== Extraction Summary ===${NC}" echo -e "Success logs: $(grep -c "SUCCESS" "$LOG_FILE" 2>/dev/null || echo 0)" echo -e "Error logs: $(grep -c "ERROR" "$LOG_FILE" 2>/dev/null || echo 0)" echo -e "Warning logs: $(grep -c "WARNING" "$LOG_FILE" 2>/dev/null || echo 0)" } # Run main function main