{ "_meta": { "note": "Copy of the tier fields now also stored in sources.json; kept as a standalone review table.", "tiers": { "T1": "guideline, society or government source", "T2": "peer-reviewed journal article or review (journal, year, article type recorded)", "T3": "Wikipedia, Libre Pathology or other community text", "T4": "anything else" } }, "sources": { "iccr-lung": { "tier": "T1", "tier_label": "Guideline / reporting standard", "journal": null, "year": null, "article_type": null, "legitimacy": "International Collaboration on Cancer Reporting (ICCR), a consortium of pathology colleges and societies; expert-panel reporting datasets used as national standards; synoptic checklist developed from the WHO 2021 taxonomy; not a journal article, no reuse licence found.", "license": "no explicit reuse terms found; paraphrase only" }, "pmc7698816": { "tier": "T2", "tier_label": "Peer-reviewed journal article (retrospective cohort study)", "journal": "Cancers", "year": 2020, "article_type": "retrospective cohort study", "legitimacy": "Cancers (2020). Europe PMC publication types: research-article, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (confirmed from the Europe PMC licence element and the MDPI statement; see snapshots/pmc7698816-licence-evidence.txt)" }, "pmc12308192": { "tier": "T2", "tier_label": "Peer-reviewed journal article (cross-sectional study (single centre, India))", "journal": "Iranian journal of pathology", "year": 2025, "article_type": "cross-sectional study (single centre, India)", "legitimacy": "Iranian journal of pathology (2025). Europe PMC publication types: research-article, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (confirmed; see snapshots/pmc12308192-licence-evidence.txt)" }, "bracs-paper": { "tier": "T2", "tier_label": "Dataset paper (journal + preprint)", "journal": null, "year": null, "article_type": null, "legitimacy": "BRACS dataset paper: published peer-reviewed in Database (Oxford) 2022 baac093; the cited text is the arXiv:2111.04740 preprint of it; the dataset itself is the source of the BRACS labels used in this thesis; the \"expert definition\" statements are the authors' annotation protocol, not a guideline.", "license": "Two versions, two licences. arXiv version (arXiv:2111.04740): arXiv non-exclusive distribution licence (abstract page links arxiv.org/licenses/nonexclusive-distrib/1.0/). Journal version (Database 2022, baac093, doi 10.1093/database/baac093, PMC9575967): CC BY-NC 4.0. Non-commercial research use; paraphrase with attribution." }, "pmc8833401": { "tier": "T2", "tier_label": "Peer-reviewed journal article (review)", "journal": "Cancers", "year": 2022, "article_type": "review", "legitimacy": "Cancers (2022). Europe PMC publication types: review-article, Review, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (licence statement read on the page 2026-10-01)" }, "pmc10216527": { "tier": "T2", "tier_label": "Peer-reviewed journal article (narrative review)", "journal": "Brain sciences", "year": 2023, "article_type": "narrative review", "legitimacy": "Brain sciences (2023). Europe PMC publication types: review-article, Review, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (MDPI open access licence statement read on the page 2026-10-01)" }, "pmc9427889": { "tier": "T2", "tier_label": "Peer-reviewed journal article (minireview)", "journal": "Acta neurochirurgica", "year": 2022, "article_type": "minireview", "legitimacy": "Acta neurochirurgica (2022). Europe PMC publication types: Research Support, Non-U.S. Gov't, review-article, Review, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded. Journal: established neurosurgery journal.", "license": "CC BY 4.0 (licence statement read on the page 2026-10-01)" }, "librepath-anaplastic-astrocytoma": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2018; widely used as a quick reference; NC-SA licence, paraphrase only. 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Revision predates the WHO 2021 classification, so terms and grades may be outdated.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-ependymoma": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2022; widely used as a quick reference; NC-SA licence, paraphrase only.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-ganglioglioma": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2022; widely used as a quick reference; NC-SA licence, paraphrase only.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-hemangioblastoma": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2025; widely used as a quick reference; NC-SA licence, paraphrase only.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-hemangioma": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2022; widely used as a quick reference; NC-SA licence, paraphrase only.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-lch": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2016; widely used as a quick reference; NC-SA licence, paraphrase only. Revision predates the WHO 2021 classification, so terms and grades may be outdated.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-lipoma": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2018; widely used as a quick reference; NC-SA licence, paraphrase only. Revision predates the WHO 2021 classification, so terms and grades may be outdated.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-medulloblastoma": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2019; widely used as a quick reference; NC-SA licence, paraphrase only. Revision predates the WHO 2021 classification, so terms and grades may be outdated.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-meningioma": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2022; widely used as a quick reference; NC-SA licence, paraphrase only.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-neuropath-tumours": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2022; widely used as a quick reference; NC-SA licence, paraphrase only.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-pilocytic": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2017; widely used as a quick reference; NC-SA licence, paraphrase only. Revision predates the WHO 2021 classification, so terms and grades may be outdated.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-pituitary-gland": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2022; widely used as a quick reference; NC-SA licence, paraphrase only.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-schwannoma": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2022; widely used as a quick reference; NC-SA licence, paraphrase only.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "librepath-sft": { "tier": "T3", "tier_label": "Libre Pathology (community wiki)", "journal": null, "year": null, "article_type": null, "legitimacy": "Libre Pathology: volunteer-edited community wiki for pathologists and trainees, not peer-reviewed, no named review board; revision 2016; widely used as a quick reference; NC-SA licence, paraphrase only. Revision predates the WHO 2021 classification, so terms and grades may be outdated.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "pmc10033642": { "tier": "T2", "tier_label": "Peer-reviewed journal article (narrative imaging review)", "journal": "Neuroradiology", "year": 2023, "article_type": "narrative imaging review", "legitimacy": "Neuroradiology (2023). Europe PMC publication types: review-article, Review, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded. Journal: established neuroradiology journal.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc10791336": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "Case reports in pathology", "year": 2024, "article_type": "case report", "legitimacy": "Case reports in pathology (2024). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY (version not stated on the page) (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc11089008": { "tier": "T2", "tier_label": "Peer-reviewed journal article (brief report / letter (small series of 7 spinal ependymomas))", "journal": "Acta neuropathologica", "year": 2024, "article_type": "brief report / letter (small series of 7 spinal ependymomas)", "legitimacy": "Acta neuropathologica (2024). Europe PMC publication types: Letter, brief-report, Research Support, Non-U.S. Gov't. Indexed in PubMed Central / Europe PMC; open-access licence as recorded. Journal: leading neuropathology journal.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc11226565": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "Cureus", "year": 2024, "article_type": "case report", "legitimacy": "Cureus (2024). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded. Journal: open-access journal with light peer review; case reports carry the lowest evidentiary weight.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc11227055": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "European thyroid journal", "year": 2024, "article_type": "case report", "legitimacy": "European thyroid journal (2024). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc11511714": { "tier": "T2", "tier_label": "Peer-reviewed journal article (review)", "journal": "Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery", "year": 2024, "article_type": "review", "legitimacy": "Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery (2024). Europe PMC publication types: Research Support, Non-U.S. Gov't, review-article, Review, Journal Article, Research Support, N.I.H., Extramural. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc11722003": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "Cureus", "year": 2024, "article_type": "case report", "legitimacy": "Cureus (2024). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded. Journal: open-access journal with light peer review; case reports carry the lowest evidentiary weight.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc12103695": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "Cureus", "year": 2025, "article_type": "case report", "legitimacy": "Cureus (2025). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded. Journal: open-access journal with light peer review; case reports carry the lowest evidentiary weight.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc12233036": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "Cureus", "year": 2025, "article_type": "case report", "legitimacy": "Cureus (2025). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded. Journal: open-access journal with light peer review; case reports carry the lowest evidentiary weight.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc12724472": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "Cureus", "year": 2025, "article_type": "case report", "legitimacy": "Cureus (2025). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded. Journal: open-access journal with light peer review; case reports carry the lowest evidentiary weight.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc12777031": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "BMC neurology", "year": 2025, "article_type": "case report", "legitimacy": "BMC neurology (2025). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc13056813": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "Frontiers in oncology", "year": 2026, "article_type": "case report", "legitimacy": "Frontiers in oncology (2026). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc13260794": { "tier": "T2", "tier_label": "Peer-reviewed journal article (retrospective observational cohort study)", "journal": "Frontiers in oncology", "year": 2026, "article_type": "retrospective observational cohort study", "legitimacy": "Frontiers in oncology (2026). Europe PMC publication types: research-article, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc13513445": { "tier": "T2", "tier_label": "Peer-reviewed journal article (narrative review)", "journal": "International journal of molecular sciences", "year": 2026, "article_type": "narrative review", "legitimacy": "International journal of molecular sciences (2026). Europe PMC publication types: review-article, Review, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc13605746": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "Current oncology (Toronto, Ont.)", "year": 2026, "article_type": "case report", "legitimacy": "Current oncology (Toronto, Ont.) (2026). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY (version not stated on the page) (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc7170742": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report with literature review)", "journal": "The Pan African medical journal", "year": 2020, "article_type": "case report with literature review", "legitimacy": "The Pan African medical journal (2020). Europe PMC publication types: Review, Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 2.0 (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc7536112": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "Cureus", "year": 2020, "article_type": "case report", "legitimacy": "Cureus (2020). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded. Journal: open-access journal with light peer review; case reports carry the lowest evidentiary weight.", "license": "CC BY (version not stated on the page) (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "pmc9422988": { "tier": "T2", "tier_label": "Peer-reviewed journal article (case report)", "journal": "Autopsy & case reports", "year": 2022, "article_type": "case report", "legitimacy": "Autopsy & case reports (2022). Europe PMC publication types: Journal Article, Case Reports, case-report. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY (version not stated on the page) (read from the Europe PMC full-text XML licence element and the PMC article page, 2026-10-01)" }, "librepath-copyrights-licence-page": { "tier": "T3", "tier_label": "Libre Pathology licence page (record only)", "journal": null, "year": null, "article_type": null, "legitimacy": "Licence evidence page for Libre Pathology; no passage cites it; kept so the NC-SA wording is traceable.", "license": "CC BY-NC-SA 3.0 (Copyrights page says NC SA 3.0)" }, "pmc13042621": { "tier": "T2", "tier_label": "Peer-reviewed journal article (review)", "journal": "MedComm", "year": 2026, "article_type": "review", "legitimacy": "MedComm (2026). Europe PMC publication types: review-article, Review, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element, 2026-10-01)" }, "pmc10358772": { "tier": "T2", "tier_label": "Peer-reviewed journal article (original research article)", "journal": "Frontiers in oncology", "year": 2023, "article_type": "original research article", "legitimacy": "Frontiers in oncology (2023). Europe PMC publication types: research-article, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element, 2026-10-01)" }, "pmc10978634": { "tier": "T2", "tier_label": "Peer-reviewed journal article (multicentre retrospective study)", "journal": "Journal of neuro-oncology", "year": 2024, "article_type": "multicentre retrospective study", "legitimacy": "Journal of neuro-oncology (2024). Europe PMC publication types: research-article, Multicenter Study, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded. Journal: established neuro-oncology journal.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element, 2026-10-01)" }, "pmc9367316": { "tier": "T2", "tier_label": "Peer-reviewed journal article (review)", "journal": "Cancers", "year": 2022, "article_type": "review", "legitimacy": "Cancers (2022). Europe PMC publication types: review-article, Review, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element, 2026-10-01)" }, "pmc11861498": { "tier": "T2", "tier_label": "Peer-reviewed journal article (review)", "journal": "Head and neck pathology", "year": 2025, "article_type": "review", "legitimacy": "Head and neck pathology (2025). Europe PMC publication types: review-article, Review, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element, 2026-10-01)" }, "pmc13301885": { "tier": "T2", "tier_label": "Peer-reviewed journal article (systematic review)", "journal": "Journal of clinical medicine", "year": 2026, "article_type": "systematic review", "legitimacy": "Journal of clinical medicine (2026). Europe PMC publication types: review-article, Review, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element, 2026-10-01)" }, "pmc13564585": { "tier": "T2", "tier_label": "Peer-reviewed journal article (retrospective reappraisal of 23 cases)", "journal": "Diagnostics (Basel, Switzerland)", "year": 2026, "article_type": "retrospective reappraisal of 23 cases", "legitimacy": "Diagnostics (Basel, Switzerland) (2026). Europe PMC publication types: research-article, Journal Article. Indexed in PubMed Central / Europe PMC; open-access licence as recorded.", "license": "CC BY 4.0 (read from the Europe PMC full-text XML licence element, 2026-10-01)" }, "bracs-paper-arxiv": { "tier": "T2", "tier_label": "Dataset paper (journal + preprint)", "journal": null, "year": null, "article_type": null, "legitimacy": "BRACS dataset paper: published peer-reviewed in Database (Oxford) 2022 baac093; the cited text is the arXiv:2111.04740 preprint of it; the dataset itself is the source of the BRACS labels used in this thesis; the \"expert definition\" statements are the authors' annotation protocol, not a guideline.", "license": "Two versions, two licences. arXiv version (arXiv:2111.04740): arXiv non-exclusive distribution licence (abstract page links arxiv.org/licenses/nonexclusive-distrib/1.0/). Journal version (Database 2022, baac093, doi 10.1093/database/baac093, PMC9575967): CC BY-NC 4.0. 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