{
  "id": "coverage-20261027",
  "checkedOn": "2026-11-02",
  "sharedPriors": [
    {
      "modelId": "ntv3_100m_native",
      "fromModelId": "ntv3_100m_post",
      "checkpoint": "InstaDeepAI/NTv3_100M_post",
      "revision": "b7292f0bd1b5b004d28561783a1890e1ec6f94fd"
    },
    {
      "modelId": "ntv3_650m_native",
      "fromModelId": "ntv3_650m_post",
      "checkpoint": "InstaDeepAI/NTv3_650M_post",
      "revision": "ad622051abbe9376bdea3f2727863fa559957e9f"
    }
  ],
  "missing": [
    {
      "modelId": "alphagenome_fitted",
      "taskId": "prior",
      "status": "unsupported",
      "reason": "AlphaGenome does not provide nucleotide probabilities for this hidden-base task. Fitting its functional readouts does not supply a sequence-prior head."
    },
    {
      "modelId": "alphagenome",
      "taskId": "prior",
      "status": "unsupported",
      "reason": "AlphaGenome predicts functional measurements, not nucleotide probabilities for a hidden base."
    },
    {
      "modelId": "enformer",
      "taskId": "prior",
      "status": "unsupported",
      "reason": "Enformer predicts functional measurements, not nucleotide probabilities for a hidden base."
    },
    {
      "modelId": "enformer",
      "taskId": "opensplice",
      "status": "unsupported",
      "reason": "Enformer has no native splice output. A splicing predictor fitted to its representations would be a separate model/readout entry."
    },
    {
      "modelId": "dnabert2",
      "taskId": "prior",
      "status": "unsupported",
      "reason": "DNABERT-2 predicts multi-base tokens. A forced single-base query was tested, but its tokenization mismatch prevents a directly comparable prior score.",
      "diagnosticSourceId": "dnabert2-prior-diagnostic"
    },
    {
      "modelId": "markov0",
      "taskId": "opensplice",
      "status": "unsupported",
      "reason": "Base composition is a sequence-prior baseline; it does not predict functional outcomes."
    },
    {
      "modelId": "markov0",
      "taskId": "context",
      "status": "unsupported",
      "reason": "Base composition is a sequence-prior baseline; it does not predict functional outcomes."
    },
    {
      "modelId": "markov0",
      "taskId": "tissue_identification",
      "status": "unsupported",
      "reason": "Base composition is a sequence-prior baseline; it does not predict functional outcomes."
    },
    {
      "modelId": "markov0",
      "taskId": "background",
      "status": "unsupported",
      "reason": "Base composition is a sequence-prior baseline; it does not predict functional outcomes."
    },
    {
      "modelId": "markov0",
      "taskId": "repair_percentile",
      "status": "unsupported",
      "reason": "Base composition is a sequence-prior baseline; it does not predict functional outcomes."
    },
    {
      "modelId": "markov0",
      "taskId": "cell_selective",
      "status": "unsupported",
      "reason": "Base composition is a sequence-prior baseline; it does not predict functional outcomes."
    },
    {
      "modelId": "markov0",
      "taskId": "atlas_profile",
      "status": "unsupported",
      "reason": "Base composition is a sequence-prior baseline; it does not predict functional outcomes."
    },
    {
      "modelId": "kmer_3_6",
      "taskId": "prior",
      "status": "unsupported",
      "reason": "This baseline was trained to predict functional measurements and has no hidden-base probability output."
    },
    {
      "modelId": "onehot_resnet",
      "taskId": "prior",
      "status": "unsupported",
      "reason": "This baseline was trained to predict functional measurements and has no hidden-base probability output."
    },
    {
      "modelId": "spliceai",
      "taskId": "prior",
      "status": "unsupported",
      "reason": "SpliceAI predicts splice sites, not nucleotide probabilities for a hidden base."
    },
    {
      "modelId": "spliceai",
      "taskId": "context",
      "status": "unsupported",
      "reason": "SpliceAI is a splicing specialist; this endpoint requires a different functional output."
    },
    {
      "modelId": "spliceai",
      "taskId": "tissue_identification",
      "status": "unsupported",
      "reason": "SpliceAI is a splicing specialist; this endpoint requires a different functional output."
    },
    {
      "modelId": "spliceai",
      "taskId": "background",
      "status": "unsupported",
      "reason": "SpliceAI is a splicing specialist; this endpoint requires a different functional output."
    },
    {
      "modelId": "spliceai",
      "taskId": "repair_percentile",
      "status": "unsupported",
      "reason": "SpliceAI is a splicing specialist; this endpoint requires a different functional output."
    },
    {
      "modelId": "spliceai",
      "taskId": "cell_selective",
      "status": "unsupported",
      "reason": "SpliceAI is a splicing specialist; this endpoint requires a different functional output."
    },
    {
      "modelId": "spliceai",
      "taskId": "atlas_profile",
      "status": "unsupported",
      "reason": "SpliceAI is a splicing specialist; this endpoint requires a different functional output."
    }
  ],
  "additionalSources": [
    {
      "id": "dnabert2-prior-diagnostic",
      "title": "DNABERT-2 single-base query audit (excluded from scores)",
      "snapshotPath": "provenance/coverage-20261027/dnabert2-prior/README.md",
      "sha256": "7880ca30ea6bdbbf1cf71c78202e4e3109b546b6910ffa2a535f94439539d7b1"
    },
    {
      "id": "dnabert2-prior-diagnostic-files",
      "title": "DNABERT-2 diagnostic artifact checksums",
      "snapshotPath": "provenance/coverage-20261027/dnabert2-prior/SHA256SUMS.json",
      "sha256": "9e7c1cdec20b1c037ba0405d3b17a9f5daa083553ed75afa58066292856ed2d9"
    },
    {
      "id": "ceno-full-opensplice",
      "title": "CENO full OpenSplice evaluation",
      "snapshotPath": "provenance/coverage-20261027/ceno-opensplice/entry.json",
      "sha256": "489a42519dd6e9267ce1eff84cba8c25c9bb5feb863b15e44996cf2d5bdc7d11"
    },
    {
      "id": "ceno-full-opensplice-methods",
      "title": "CENO evaluation protocol and numerical checks",
      "snapshotPath": "provenance/coverage-20261027/ceno-opensplice/README.md",
      "sha256": "d0a373d57344d76116720fd8bbbc4d946ebddc33e26c5b440a5d7b1517d46e7a"
    },
    {
      "id": "ceno-full-opensplice-files",
      "title": "CENO evaluation artifact checksums",
      "snapshotPath": "provenance/coverage-20261027/ceno-opensplice/SHA256SUMS.json",
      "sha256": "4458b87b47a46dd8d0f678c2ea99b8151b497abf0b567c996e50c892498cac73"
    },
    {
      "id": "evo2-tissue-identification",
      "title": "Evo2 completed tissue-identification evaluation",
      "snapshotPath": "provenance/evo2-tissue-20261102/entry.json",
      "sha256": "6b1be888062990288244e8657a1462103e2aba687aca9152ee73496a0105766b"
    },
    {
      "id": "evo2-tissue-identification-methods",
      "title": "Evo2 extraction and independent evaluation checks",
      "snapshotPath": "provenance/evo2-tissue-20261102/README.md",
      "sha256": "7adc9a70eda713700bd91e5eaa23cc54cedb46ad6e5ffd5cb665a93e36b162cc"
    },
    {
      "id": "evo2-tissue-identification-files",
      "title": "Evo2 evaluation artifact checksums",
      "snapshotPath": "provenance/evo2-tissue-20261102/SHA256SUMS.json",
      "sha256": "a43ae2b3e1594858e8bd37f78165790cf5b63344394c6780f4faf9bc06180051"
    }
  ],
  "evaluations": [
    {
      "modelId": "ceno_1b_1m",
      "taskId": "opensplice",
      "sourceId": "ceno-full-opensplice"
    },
    {
      "modelId": "evo2_20b",
      "taskId": "tissue_identification",
      "sourceId": "evo2-tissue-identification"
    }
  ]
}