diff --git a/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_000/summary.json b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_000/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..0554d72bb9e54d9388dabb0b34f579e4d149b1ca --- /dev/null +++ b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_000/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8217653641048429, + "FN": 1760.6466666666668, + "FP": 1199.8333333333333, + "IoU": 0.7181484061367649, + "TN": 843034.6933333334, + "TP": 8433.466666666667, + "n_pred": 9633.3, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.752853616656826, + "FN": 2574.44, + "FP": 1307.32, + "IoU": 0.6279882268101872, + "TN": 843267.26, + "TP": 7279.62, + "n_pred": 8586.94, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8037501910019064, + "FN": 1961.42, + "FP": 1533.72, + "IoU": 0.6851689928380347, + "TN": 842839.42, + "TP": 8094.08, + "n_pred": 9627.8, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9086922846557967, + "FN": 746.08, + "FP": 758.46, + "IoU": 0.8412879987620728, + "TN": 842997.4, + "TP": 9926.7, + "n_pred": 10685.16, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8509681563733138, + "FN": 2173, + "FP": 1075, + "IoU": 0.7405957990575832, + "TN": 1093399, + "TP": 9273, + "n_pred": 10348, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8586997758234178, + "FN": 1007, + "FP": 3090, + "IoU": 0.7523872839356944, + "TN": 1089374, + "TP": 12449, + "n_pred": 15539, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9454545454545454, + "FN": 886, + "FP": 1805, + "IoU": 0.896551724137931, + "TN": 1079907, + "TP": 23322, + "n_pred": 25127, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8707283554741182, + "FN": 126, + "FP": 1285, + "IoU": 0.7710530585753691, + "TN": 1099757, + "TP": 4752, + "n_pred": 6037, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8695568892861704, + "FN": 2361, + "FP": 1725, + "IoU": 0.7692177351030782, + "TN": 1088215, + "TP": 13619, + "n_pred": 15344, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9515765146095857, + "FN": 1189, + "FP": 571, + "IoU": 0.9076260956279851, + "TN": 1086867, + "TP": 17293, + "n_pred": 17864, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5999859816359431, + "FN": 4590, + "FP": 1117, + "IoU": 0.42855712426154, + "TN": 899453, + "TP": 4280, + "n_pred": 5397, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8709351494966883, + "FN": 2149, + "FP": 1300, + "IoU": 0.7713774360334085, + "TN": 894354, + "TP": 11637, + "n_pred": 12937, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9640768588137009, + "FN": 1217, + "FP": 288, + "IoU": 0.9306451612903226, + "TN": 887740, + "TP": 20195, + "n_pred": 20483, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4664310954063604, + "FN": 4272, + "FP": 1919, + "IoU": 0.30414746543778803, + "TN": 900543, + "TP": 2706, + "n_pred": 4625, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8567596187786799, + "FN": 2188, + "FP": 1870, + "IoU": 0.749413362973941, + "TN": 893246, + "TP": 12136, + "n_pred": 14006, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9611838109436254, + "FN": 1226, + "FP": 180, + "IoU": 0.9252684171361751, + "TN": 890626, + "TP": 17408, + "n_pred": 17588, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8358455795492132, + "FN": 6489, + "FP": 459, + "IoU": 0.7179851442951658, + "TN": 1401123, + "TP": 17689, + "n_pred": 18148, + "n_ref": 24178 + }, + "2": { + "Dice": 0.85681009382077, + "FN": 1842, + "FP": 2584, + "IoU": 0.7494906044826806, + "TN": 1408092, + "TP": 13242, + "n_pred": 15826, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9679141189826526, + "FN": 977, + "FP": 634, + "IoU": 0.9378232342724817, + "TN": 1399850, + "TP": 24299, + "n_pred": 24933, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8739073091433304, + "FN": 3304, + "FP": 807, + "IoU": 0.7760527319278749, + "TN": 1407403, + "TP": 14246, + "n_pred": 15053, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8486542044067579, + "FN": 1857, + "FP": 2855, + "IoU": 0.7370975841098031, + "TN": 1407837, + "TP": 13211, + "n_pred": 16066, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9536331557773133, + "FN": 1485, + "FP": 578, + "IoU": 0.911375547727468, + "TN": 1402482, + "TP": 21215, + "n_pred": 21793, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7916534935188112, + "FN": 2998, + "FP": 297, + "IoU": 0.6551543694400838, + "TN": 752493, + "TP": 6260, + "n_pred": 6557, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8615926182729745, + "FN": 1333, + "FP": 1262, + "IoU": 0.7568403298350824, + "TN": 751376, + "TP": 8077, + "n_pred": 9339, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9677889335824914, + "FN": 738, + "FP": 279, + "IoU": 0.9375882172445535, + "TN": 745753, + "TP": 15278, + "n_pred": 15557, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8029181645168112, + "FN": 1121, + "FP": 743, + "IoU": 0.6707295530824943, + "TN": 756387, + "TP": 3797, + "n_pred": 4540, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8107877118845259, + "FN": 2700, + "FP": 1285, + "IoU": 0.6817855146530384, + "TN": 749525, + "TP": 8538, + "n_pred": 9823, + "n_ref": 11238 + }, + "3": { + "Dice": 0.943499580333083, + "FN": 1233, + "FP": 46, + "IoU": 0.8930423147683559, + "TN": 750090, + "TP": 10679, + "n_pred": 10725, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.39911111111111114, + "FN": 10252, + "FP": 564, + "IoU": 0.249305941143809, + "TN": 1063864, + "TP": 3592, + "n_pred": 4156, + "n_ref": 13844 + }, + "2": { + "Dice": 0.7158415841584158, + "FN": 1917, + "FP": 4397, + "IoU": 0.5574402467232074, + "TN": 1064005, + "TP": 7953, + "n_pred": 12350, + "n_ref": 9870 + }, + "3": { + "Dice": 0.8273336254930195, + "FN": 5189, + "FP": 327, + "IoU": 0.7055149217874113, + "TN": 1059541, + "TP": 13215, + "n_pred": 13542, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4716717834217137, + "FN": 9071, + "FP": 394, + "IoU": 0.3086194302410519, + "TN": 1064582, + "TP": 4225, + "n_pred": 4619, + "n_ref": 13296 + }, + "2": { + "Dice": 0.7208033936455718, + "FN": 2474, + "FP": 3976, + "IoU": 0.5634813210611803, + "TN": 1063496, + "TP": 8326, + "n_pred": 12302, + "n_ref": 10800 + }, + "3": { + "Dice": 0.8149146451033243, + "FN": 4342, + "FP": 602, + "IoU": 0.6876421531463229, + "TN": 1062444, + "TP": 10884, + "n_pred": 11486, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8630219647598358, + "FN": 1981, + "FP": 289, + "IoU": 0.7590489332342639, + "TN": 1096499, + "TP": 7151, + "n_pred": 7440, + "n_ref": 9132 + }, + "2": { + "Dice": 0.822390680543064, + "FN": 1881, + "FP": 2266, + "IoU": 0.698356124527204, + "TN": 1092172, + "TP": 9601, + "n_pred": 11867, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9025860226544133, + "FN": 938, + "FP": 1341, + "IoU": 0.8224663083274908, + "TN": 1093083, + "TP": 10558, + "n_pred": 11899, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6734517854062446, + "FN": 1100, + "FP": 793, + "IoU": 0.5076723016905071, + "TN": 1102075, + "TP": 1952, + "n_pred": 2745, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8292163368973003, + "FN": 2231, + "FP": 1938, + "IoU": 0.708257522743177, + "TN": 1091630, + "TP": 10121, + "n_pred": 12059, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7869598180439727, + "FN": 166, + "FP": 1520, + "IoU": 0.64875, + "TN": 1101120, + "TP": 3114, + "n_pred": 4634, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8756924440505207, + "FN": 1260, + "FP": 984, + "IoU": 0.7788726842727631, + "TN": 1136732, + "TP": 7904, + "n_pred": 8888, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8806267427964414, + "FN": 2836, + "FP": 1659, + "IoU": 0.7867141162514828, + "TN": 1125805, + "TP": 16580, + "n_pred": 18239, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9417195116690393, + "FN": 1015, + "FP": 336, + "IoU": 0.8898581444643731, + "TN": 1134614, + "TP": 10915, + "n_pred": 11251, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.26426121204421293, + "FN": 1426, + "FP": 4365, + "IoU": 0.1522471087688479, + "TN": 1140049, + "TP": 1040, + "n_pred": 5405, + "n_ref": 2466 + }, + "2": { + "Dice": 0.6410541429299245, + "FN": 10595, + "FP": 4905, + "IoU": 0.47172897992570123, + "TN": 1117539, + "TP": 13841, + "n_pred": 18746, + "n_ref": 24436 + }, + "3": { + "Dice": 0.5070334479524852, + "FN": 283, + "FP": 4448, + "IoU": 0.3396147403685092, + "TN": 1139716, + "TP": 2433, + "n_pred": 6881, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8986631382032212, + "FN": 1998, + "FP": 223, + "IoU": 0.8159748115005385, + "TN": 788731, + "TP": 9848, + "n_pred": 10071, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8596129623268064, + "FN": 1127, + "FP": 1325, + "IoU": 0.7537905412189979, + "TN": 790841, + "TP": 7507, + "n_pred": 8832, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9465045228538909, + "FN": 753, + "FP": 140, + "IoU": 0.8984419424542249, + "TN": 792007, + "TP": 7900, + "n_pred": 8040, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6479038405159777, + "FN": 624, + "FP": 2979, + "IoU": 0.47918473547268, + "TN": 793882, + "TP": 3315, + "n_pred": 6294, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8500915671056074, + "FN": 2904, + "FP": 534, + "IoU": 0.7392689215834977, + "TN": 787614, + "TP": 9748, + "n_pred": 10282, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8676470588235294, + "FN": 132, + "FP": 696, + "IoU": 0.7662337662337663, + "TN": 797258, + "TP": 2714, + "n_pred": 3410, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9316452144635781, + "FN": 910, + "FP": 1039, + "IoU": 0.8720372923642571, + "TN": 1332609, + "TP": 13282, + "n_pred": 14321, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8749052312357847, + "FN": 1374, + "FP": 1266, + "IoU": 0.7776280323450134, + "TN": 1335968, + "TP": 9232, + "n_pred": 10498, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9689610994642441, + "FN": 689, + "FP": 377, + "IoU": 0.939791019486021, + "TN": 1330135, + "TP": 16639, + "n_pred": 17016, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7692859191281904, + "FN": 503, + "FP": 2715, + "IoU": 0.6250728183618781, + "TN": 1339257, + "TP": 5365, + "n_pred": 8080, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8388433318946914, + "FN": 2396, + "FP": 1338, + "IoU": 0.7224204579244722, + "TN": 1334388, + "TP": 9718, + "n_pred": 11056, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9364703820539783, + "FN": 931, + "FP": 519, + "IoU": 0.8805306088819312, + "TN": 1335703, + "TP": 10687, + "n_pred": 11206, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8313951196436314, + "FN": 1917, + "FP": 2360, + "IoU": 0.7114424504115504, + "TN": 837146, + "TP": 10545, + "n_pred": 12905, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8336001600960576, + "FN": 1117, + "FP": 2209, + "IoU": 0.7146778759543622, + "TN": 840311, + "TP": 8331, + "n_pred": 10540, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9615785718206268, + "FN": 969, + "FP": 431, + "IoU": 0.926000317141498, + "TN": 833049, + "TP": 17519, + "n_pred": 17950, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8685335298452469, + "FN": 1045, + "FP": 739, + "IoU": 0.7676175589422952, + "TN": 844291, + "TP": 5893, + "n_pred": 6632, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8548308644704842, + "FN": 1626, + "FP": 1657, + "IoU": 0.7464669086415939, + "TN": 839019, + "TP": 9666, + "n_pred": 11323, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9462482102085833, + "FN": 770, + "FP": 619, + "IoU": 0.8979801689313257, + "TN": 838353, + "TP": 12226, + "n_pred": 12845, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6305525460455038, + "FN": 2655, + "FP": 1096, + "IoU": 0.46044303797468356, + "TN": 845016, + "TP": 3201, + "n_pred": 4297, + "n_ref": 5856 + }, + "2": { + "Dice": 0.7918960173921088, + "FN": 2160, + "FP": 2339, + "IoU": 0.6554866375679608, + "TN": 838909, + "TP": 8560, + "n_pred": 10899, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9035926378300972, + "FN": 2229, + "FP": 60, + "IoU": 0.824139520590043, + "TN": 838952, + "TP": 10727, + "n_pred": 10787, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5247585781795767, + "FN": 827, + "FP": 1486, + "IoU": 0.3557103064066852, + "TN": 848378, + "TP": 1277, + "n_pred": 2763, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8183283835383963, + "FN": 2942, + "FP": 1340, + "IoU": 0.6925175929915266, + "TN": 838042, + "TP": 9644, + "n_pred": 10984, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9373867290266004, + "FN": 729, + "FP": 342, + "IoU": 0.8821522887323944, + "TN": 842880, + "TP": 8017, + "n_pred": 8359, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6058743469289195, + "FN": 6188, + "FP": 2789, + "IoU": 0.4345909176796624, + "TN": 781163, + "TP": 6900, + "n_pred": 9689, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7885611348795316, + "FN": 1850, + "FP": 1906, + "IoU": 0.6509293680297398, + "TN": 786280, + "TP": 7004, + "n_pred": 8910, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9405175743530321, + "FN": 1283, + "FP": 257, + "IoU": 0.8877141815530442, + "TN": 783325, + "TP": 12175, + "n_pred": 12432, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6242171189979123, + "FN": 2585, + "FP": 3535, + "IoU": 0.4537177541729894, + "TN": 785837, + "TP": 5083, + "n_pred": 8618, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8250505480472491, + "FN": 1869, + "FP": 1419, + "IoU": 0.7022008876007608, + "TN": 785999, + "TP": 7753, + "n_pred": 9172, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9429134967596506, + "FN": 666, + "FP": 347, + "IoU": 0.8919927497601023, + "TN": 787661, + "TP": 8366, + "n_pred": 8713, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8882441874719078, + "FN": 1599, + "FP": 1136, + "IoU": 0.7989561893560717, + "TN": 883066, + "TP": 10869, + "n_pred": 12005, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8429854740061162, + "FN": 1517, + "FP": 1769, + "IoU": 0.728586767985463, + "TN": 884563, + "TP": 8821, + "n_pred": 10590, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9463968761093362, + "FN": 255, + "FP": 1104, + "IoU": 0.8982479784366577, + "TN": 883314, + "TP": 11997, + "n_pred": 13101, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7830130192188469, + "FN": 1304, + "FP": 1496, + "IoU": 0.6434029546612328, + "TN": 888818, + "TP": 5052, + "n_pred": 6548, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8440623226989046, + "FN": 1848, + "FP": 1725, + "IoU": 0.7301970852525863, + "TN": 883427, + "TP": 9670, + "n_pred": 11395, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9376210771018985, + "FN": 356, + "FP": 771, + "IoU": 0.8825674690007294, + "TN": 887073, + "TP": 8470, + "n_pred": 9241, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9472277889111557, + "FN": 585, + "FP": 600, + "IoU": 0.899746192893401, + "TN": 750228, + "TP": 10635, + "n_pred": 11235, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8980904522613066, + "FN": 1476, + "FP": 552, + "IoU": 0.8150310105800803, + "TN": 751084, + "TP": 8936, + "n_pred": 9488, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9696636809193848, + "FN": 277, + "FP": 441, + "IoU": 0.94111375379316, + "TN": 749855, + "TP": 11475, + "n_pred": 11916, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7645266594124048, + "FN": 279, + "FP": 1885, + "IoU": 0.6188127532147261, + "TN": 756371, + "TP": 3513, + "n_pred": 5398, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8140413871303033, + "FN": 3017, + "FP": 919, + "IoU": 0.6863994900804716, + "TN": 749497, + "TP": 8615, + "n_pred": 9534, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9369993505087681, + "FN": 342, + "FP": 531, + "IoU": 0.8814663951120163, + "TN": 754683, + "TP": 6492, + "n_pred": 7023, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8221181669911085, + "FN": 129, + "FP": 3252, + "IoU": 0.6979631945685189, + "TN": 984134, + "TP": 7813, + "n_pred": 11065, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8123159006280221, + "FN": 1440, + "FP": 1937, + "IoU": 0.683949461862424, + "TN": 984643, + "TP": 7308, + "n_pred": 9245, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9626140884624386, + "FN": 93, + "FP": 1185, + "IoU": 0.9279228469911455, + "TN": 977597, + "TP": 16453, + "n_pred": 17638, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7201724964063249, + "FN": 236, + "FP": 2100, + "IoU": 0.5627105952826656, + "TN": 989986, + "TP": 3006, + "n_pred": 5106, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8058058058058059, + "FN": 1089, + "FP": 2403, + "IoU": 0.6747694886839899, + "TN": 984591, + "TP": 7245, + "n_pred": 9648, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9217567329695476, + "FN": 141, + "FP": 1637, + "IoU": 0.8548689902865072, + "TN": 983077, + "TP": 10473, + "n_pred": 12110, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9472585232386507, + "FN": 1168, + "FP": 297, + "IoU": 0.8998016551535463, + "TN": 743395, + "TP": 13156, + "n_pred": 13453, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9001898406489098, + "FN": 988, + "FP": 747, + "IoU": 0.8184956585416885, + "TN": 748457, + "TP": 7824, + "n_pred": 8571, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9715138480445946, + "FN": 235, + "FP": 414, + "IoU": 0.9446056674632981, + "TN": 746300, + "TP": 11067, + "n_pred": 11481, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7715552635900804, + "FN": 538, + "FP": 2244, + "IoU": 0.6280748663101604, + "TN": 750536, + "TP": 4698, + "n_pred": 6942, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8872328767123288, + "FN": 1236, + "FP": 822, + "IoU": 0.7973212527082923, + "TN": 747862, + "TP": 8096, + "n_pred": 8918, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8742926883390658, + "FN": 252, + "FP": 881, + "IoU": 0.7766607530061108, + "TN": 752943, + "TP": 3940, + "n_pred": 4821, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8530181869648291, + "FN": 1919, + "FP": 158, + "IoU": 0.7437068114511353, + "TN": 630872, + "TP": 6027, + "n_pred": 6185, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8696526508226691, + "FN": 609, + "FP": 817, + "IoU": 0.7693676208960052, + "TN": 632793, + "TP": 4757, + "n_pred": 5574, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9597141455895747, + "FN": 485, + "FP": 90, + "IoU": 0.9225484913793104, + "TN": 631552, + "TP": 6849, + "n_pred": 6939, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6714229092350377, + "FN": 479, + "FP": 2008, + "IoU": 0.5053699284009546, + "TN": 633948, + "TP": 2541, + "n_pred": 4549, + "n_ref": 3020 + }, + "2": { + "Dice": 0.8983972322248112, + "FN": 990, + "FP": 449, + "IoU": 0.8155364696833739, + "TN": 631175, + "TP": 6362, + "n_pred": 6811, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9110221138777642, + "FN": 140, + "FP": 371, + "IoU": 0.8365845858650464, + "TN": 635849, + "TP": 2616, + "n_pred": 2987, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9133039526236055, + "FN": 2177, + "FP": 341, + "IoU": 0.8404410366896902, + "TN": 967259, + "TP": 13263, + "n_pred": 13604, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8367469277650115, + "FN": 1521, + "FP": 1747, + "IoU": 0.7193163274070257, + "TN": 971397, + "TP": 8375, + "n_pred": 10122, + "n_ref": 9896 + }, + "3": { + "Dice": 0.961717404843023, + "FN": 92, + "FP": 953, + "IoU": 0.9262578505398349, + "TN": 968869, + "TP": 13126, + "n_pred": 14079, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8974023852311713, + "FN": 695, + "FP": 561, + "IoU": 0.813898355311898, + "TN": 976291, + "TP": 5493, + "n_pred": 6054, + "n_ref": 6188 + }, + "2": { + "Dice": 0.880140075343556, + "FN": 1662, + "FP": 597, + "IoU": 0.7859376480621624, + "TN": 972487, + "TP": 8294, + "n_pred": 8891, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9171638899651298, + "FN": 72, + "FP": 997, + "IoU": 0.8470015743523687, + "TN": 976053, + "TP": 5918, + "n_pred": 6915, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8509555891654063, + "FN": 3802, + "FP": 534, + "IoU": 0.7405767619959316, + "TN": 1031862, + "TP": 12378, + "n_pred": 12912, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8745412078745413, + "FN": 845, + "FP": 1411, + "IoU": 0.7770530684850282, + "TN": 1038457, + "TP": 7863, + "n_pred": 9274, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9637590400387863, + "FN": 333, + "FP": 564, + "IoU": 0.9300530255770431, + "TN": 1035752, + "TP": 11927, + "n_pred": 12491, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8422319662969651, + "FN": 532, + "FP": 1303, + "IoU": 0.7274617555324521, + "TN": 1041843, + "TP": 4898, + "n_pred": 6201, + "n_ref": 5430 + }, + "2": { + "Dice": 0.843900935155688, + "FN": 2110, + "FP": 928, + "IoU": 0.7299555555555556, + "TN": 1037326, + "TP": 8212, + "n_pred": 9140, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9253333333333333, + "FN": 222, + "FP": 562, + "IoU": 0.8610421836228288, + "TN": 1042934, + "TP": 4858, + "n_pred": 5420, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7248129874263887, + "FN": 4331, + "FP": 856, + "IoU": 0.5683974038941587, + "TN": 477198, + "TP": 6831, + "n_pred": 7687, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7321850726106045, + "FN": 549, + "FP": 1037, + "IoU": 0.5775173148641449, + "TN": 485462, + "TP": 2168, + "n_pred": 3205, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9479349963771866, + "FN": 72, + "FP": 431, + "IoU": 0.9010232192050374, + "TN": 484134, + "TP": 4579, + "n_pred": 5010, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7804173354735152, + "FN": 1789, + "FP": 947, + "IoU": 0.6399052382205843, + "TN": 481618, + "TP": 4862, + "n_pred": 5809, + "n_ref": 6651 + }, + "2": { + "Dice": 0.820166000614817, + "FN": 692, + "FP": 478, + "IoU": 0.6951537258989057, + "TN": 485378, + "TP": 2668, + "n_pred": 3146, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8553921568627451, + "FN": 45, + "FP": 545, + "IoU": 0.7473233404710921, + "TN": 486881, + "TP": 1745, + "n_pred": 2290, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8842594173696253, + "FN": 2930, + "FP": 459, + "IoU": 0.7925313743495561, + "TN": 464145, + "TP": 12946, + "n_pred": 13405, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7890599047724505, + "FN": 956, + "FP": 949, + "IoU": 0.651609363569861, + "TN": 475012, + "TP": 3563, + "n_pred": 4512, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9428408116604744, + "FN": 362, + "FP": 438, + "IoU": 0.8918626655852934, + "TN": 473082, + "TP": 6598, + "n_pred": 7036, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.885616374918959, + "FN": 2049, + "FP": 421, + "IoU": 0.7947140957446809, + "TN": 468448, + "TP": 9562, + "n_pred": 9983, + "n_ref": 11611 + }, + "2": { + "Dice": 0.7855359104984517, + "FN": 1730, + "FP": 417, + "IoU": 0.646816910676098, + "TN": 474401, + "TP": 3932, + "n_pred": 4349, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8388794304287263, + "FN": 96, + "FP": 945, + "IoU": 0.7224740069314849, + "TN": 476729, + "TP": 2710, + "n_pred": 3655, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.69774929568744, + "FN": 9403, + "FP": 360, + "IoU": 0.5358025865348041, + "TN": 623608, + "TP": 11269, + "n_pred": 11629, + "n_ref": 20672 + }, + "2": { + "Dice": 0.758221579210951, + "FN": 2253, + "FP": 2092, + "IoU": 0.6105932962896576, + "TN": 633482, + "TP": 6813, + "n_pred": 8905, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9282289367531775, + "FN": 1802, + "FP": 84, + "IoU": 0.866070160488567, + "TN": 630558, + "TP": 12196, + "n_pred": 12280, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6909106022193592, + "FN": 7020, + "FP": 417, + "IoU": 0.5277795415581942, + "TN": 628891, + "TP": 8312, + "n_pred": 8729, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8303095947287661, + "FN": 2967, + "FP": 793, + "IoU": 0.7098541554132264, + "TN": 631681, + "TP": 9199, + "n_pred": 9992, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9202437731849497, + "FN": 616, + "FP": 588, + "IoU": 0.8522699386503068, + "TN": 636490, + "TP": 6946, + "n_pred": 7534, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8493983225963292, + "FN": 4582, + "FP": 1613, + "IoU": 0.7382210014789774, + "TN": 540815, + "TP": 17470, + "n_pred": 19083, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7337609329446064, + "FN": 1323, + "FP": 960, + "IoU": 0.5794805673236323, + "TN": 559051, + "TP": 3146, + "n_pred": 4106, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9538383710636145, + "FN": 355, + "FP": 375, + "IoU": 0.9117504835589942, + "TN": 556208, + "TP": 7542, + "n_pred": 7917, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6701914832809374, + "FN": 1397, + "FP": 5527, + "IoU": 0.5039759295078444, + "TN": 550521, + "TP": 7035, + "n_pred": 12562, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8358580618385557, + "FN": 835, + "FP": 747, + "IoU": 0.7180035650623886, + "TN": 558870, + "TP": 4028, + "n_pred": 4775, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8792918454935622, + "FN": 174, + "FP": 726, + "IoU": 0.784585926280517, + "TN": 560302, + "TP": 3278, + "n_pred": 4004, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.35260300223570745, + "FN": 5919, + "FP": 162, + "IoU": 0.2140364482357503, + "TN": 411143, + "TP": 1656, + "n_pred": 1818, + "n_ref": 7575 + }, + "2": { + "Dice": 0.1503964998632759, + "FN": 2581, + "FP": 526, + "IoU": 0.08131283264340627, + "TN": 415498, + "TP": 275, + "n_pred": 801, + "n_ref": 2856 + }, + "3": { + "Dice": 0.759531898829747, + "FN": 175, + "FP": 2373, + "IoU": 0.6122945830797322, + "TN": 412308, + "TP": 4024, + "n_pred": 6397, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6046899178669206, + "FN": 2197, + "FP": 1124, + "IoU": 0.43337314451458797, + "TN": 413019, + "TP": 2540, + "n_pred": 3664, + "n_ref": 4737 + }, + "2": { + "Dice": 0.38249516441005804, + "FN": 2202, + "FP": 352, + "IoU": 0.23647234678624812, + "TN": 415535, + "TP": 791, + "n_pred": 1143, + "n_ref": 2993 + }, + "3": { + "Dice": 0.7144464084846537, + "FN": 160, + "FP": 1617, + "IoU": 0.55575, + "TN": 414880, + "TP": 2223, + "n_pred": 3840, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9427309532572691, + "FN": 759, + "FP": 797, + "IoU": 0.8916660864721855, + "TN": 482147, + "TP": 12807, + "n_pred": 13604, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8226198997852541, + "FN": 1926, + "FP": 552, + "IoU": 0.6986867704280155, + "TN": 488286, + "TP": 5746, + "n_pred": 6298, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9288733244777201, + "FN": 80, + "FP": 1098, + "IoU": 0.8671927846674182, + "TN": 487640, + "TP": 7692, + "n_pred": 8790, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9143722573880626, + "FN": 1489, + "FP": 716, + "IoU": 0.8422521104592932, + "TN": 482532, + "TP": 11773, + "n_pred": 12489, + "n_ref": 13262 + }, + "2": { + "Dice": 0.7593486960121429, + "FN": 2973, + "FP": 515, + "IoU": 0.6120565009453899, + "TN": 487519, + "TP": 5503, + "n_pred": 6018, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8180491364631477, + "FN": 37, + "FP": 1459, + "IoU": 0.6921177196954106, + "TN": 491651, + "TP": 3363, + "n_pred": 4822, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_000/summary_cross_val.json b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_000/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..e718f0d2cd7d48f4758bc949e5e4db2c450bc6f6 --- /dev/null +++ b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_000/summary_cross_val.json @@ -0,0 +1,3372 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.7893777785008815, + "FN": 130.62962962962962, + "FP": 63.55555555555555, + "IoU": 0.6876183398113048, + "TN": 6317.833333333333, + "TP": 599.0925925925926, + "n_pred": 662.6481481481482, + "n_ref": 729.7222222222222 + }, + "mean": { + "1": { + "Dice": 0.6779026980444567, + "FN": 141.55555555555554, + "FP": 52.888888888888886, + "IoU": 0.5630040173726618, + "TN": 6524.5, + "TP": 392.1666666666667, + "n_pred": 445.05555555555554, + "n_ref": 533.7222222222222 + }, + "2": { + "Dice": 0.804550896201843, + "FN": 129.77777777777777, + "FP": 71.83333333333333, + "IoU": 0.6873807425758465, + "TN": 6494.833333333333, + "TP": 414.6666666666667, + "n_pred": 486.5, + "n_ref": 544.4444444444445 + }, + "3": { + "Dice": 0.8856797412563449, + "FN": 120.55555555555556, + "FP": 65.94444444444444, + "IoU": 0.8124702594854061, + "TN": 5934.166666666667, + "TP": 990.4444444444445, + "n_pred": 1056.388888888889, + "n_ref": 1111.0 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5771739130434783, + "FN": 747, + "FP": 31, + "IoU": 0.40565317035905274, + "TN": 5091, + "TP": 531, + "n_pred": 562, + "n_ref": 1278 + }, + "3": { + "Dice": 0.7410786155084519, + "FN": 961, + "FP": 4, + "IoU": 0.5886615515771526, + "TN": 4054, + "TP": 1381, + "n_pred": 1385, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7735602094240838, + "FN": 43, + "FP": 303, + "IoU": 0.6307363927427961, + "TN": 5463, + "TP": 591, + "n_pred": 894, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.657501494321578, + "FN": 330, + "FP": 243, + "IoU": 0.4897595725734639, + "TN": 5277, + "TP": 550, + "n_pred": 793, + "n_ref": 880 + }, + "3": { + "Dice": 0.9321799307958477, + "FN": 390, + "FP": 2, + "IoU": 0.8729747245625405, + "TN": 3314, + "TP": 2694, + "n_pred": 2696, + "n_ref": 3084 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2222222222222222, + "FN": 0, + "FP": 14, + "IoU": 0.125, + "TN": 12784, + "TP": 2, + "n_pred": 16, + "n_ref": 2 + }, + "2": { + "Dice": 0.8913917940466614, + "FN": 190, + "FP": 80, + "IoU": 0.8040638606676342, + "TN": 11422, + "TP": 1108, + "n_pred": 1188, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9724988850899361, + "FN": 35, + "FP": 150, + "IoU": 0.9464699074074074, + "TN": 9344, + "TP": 3271, + "n_pred": 3421, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9800613496932515, + "FN": 56, + "FP": 48, + "IoU": 0.9609022556390977, + "TN": 3740, + "TP": 2556, + "n_pred": 2604, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9537299338999056, + "FN": 54, + "FP": 44, + "IoU": 0.9115523465703971, + "TN": 5292, + "TP": 1010, + "n_pred": 1054, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9907848744836352, + "FN": 7, + "FP": 22, + "IoU": 0.9817380352644837, + "TN": 4812, + "TP": 1559, + "n_pred": 1581, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8032786885245902, + "FN": 15, + "FP": 9, + "IoU": 0.6712328767123288, + "TN": 6327, + "TP": 49, + "n_pred": 58, + "n_ref": 64 + }, + "2": { + "Dice": 0.7670822942643392, + "FN": 303, + "FP": 164, + "IoU": 0.622168284789644, + "TN": 5164, + "TP": 769, + "n_pred": 933, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9270288701977722, + "FN": 15, + "FP": 306, + "IoU": 0.8639830508474576, + "TN": 4040, + "TP": 2039, + "n_pred": 2345, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.788, + "FN": 490, + "FP": 40, + "IoU": 0.6501650165016502, + "TN": 4885, + "TP": 985, + "n_pred": 1025, + "n_ref": 1475 + }, + "2": { + "Dice": 0.8844444444444445, + "FN": 77, + "FP": 79, + "IoU": 0.7928286852589641, + "TN": 5647, + "TP": 597, + "n_pred": 676, + "n_ref": 674 + }, + "3": { + "Dice": 0.9763866007688083, + "FN": 12, + "FP": 31, + "IoU": 0.953862660944206, + "TN": 5468, + "TP": 889, + "n_pred": 920, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9196006305832896, + "FN": 94, + "FP": 59, + "IoU": 0.8511673151750972, + "TN": 5372, + "TP": 875, + "n_pred": 934, + "n_ref": 969 + }, + "3": { + "Dice": 0.9837278106508875, + "FN": 35, + "FP": 9, + "IoU": 0.9679767103347889, + "TN": 5026, + "TP": 1330, + "n_pred": 1339, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2986857825567503, + "FN": 1104, + "FP": 70, + "IoU": 0.175561797752809, + "TN": 11376, + "TP": 250, + "n_pred": 320, + "n_ref": 1354 + }, + "2": { + "Dice": 0.7552140504939627, + "FN": 414, + "FP": 255, + "IoU": 0.6067019400352733, + "TN": 11099, + "TP": 1032, + "n_pred": 1287, + "n_ref": 1446 + }, + "3": { + "Dice": 0.9190117584885718, + "FN": 522, + "FP": 91, + "IoU": 0.8501588853581031, + "TN": 8709, + "TP": 3478, + "n_pred": 3569, + "n_ref": 4000 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6956521739130435, + "FN": 306, + "FP": 429, + "IoU": 0.5333333333333333, + "TN": 4825, + "TP": 840, + "n_pred": 1269, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7995570321151716, + "FN": 69, + "FP": 293, + "IoU": 0.6660516605166051, + "TN": 5316, + "TP": 722, + "n_pred": 1015, + "n_ref": 791 + }, + "3": { + "Dice": 0.7598944591029023, + "FN": 157, + "FP": 571, + "IoU": 0.6127659574468085, + "TN": 4520, + "TP": 1152, + "n_pred": 1723, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8617611580217129, + "FN": 534, + "FP": 39, + "IoU": 0.7571004662992794, + "TN": 4041, + "TP": 1786, + "n_pred": 1825, + "n_ref": 2320 + }, + "2": { + "Dice": 0.8398133748055988, + "FN": 58, + "FP": 45, + "IoU": 0.7238605898123325, + "TN": 6027, + "TP": 270, + "n_pred": 315, + "n_ref": 328 + }, + "3": { + "Dice": 0.6542056074766355, + "FN": 36, + "FP": 1, + "IoU": 0.4861111111111111, + "TN": 6328, + "TP": 35, + "n_pred": 36, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.5332779456963525, + "FN": 19.686274509803923, + "FP": 50.607843137254896, + "IoU": 0.4843908610787923, + "TN": 6050.313725490196, + "TP": 279.3921568627451, + "n_pred": 330.0, + "n_ref": 299.078431372549 + }, + "mean": { + "1": { + "Dice": 0.5143004894013811, + "FN": 22.88235294117647, + "FP": 90.52941176470588, + "IoU": 0.4702591416719896, + "TN": 5874.705882352941, + "TP": 411.88235294117646, + "n_pred": 502.4117647058824, + "n_ref": 434.7647058823529 + }, + "2": { + "Dice": 0.494044060259344, + "FN": 21.41176470588235, + "FP": 33.76470588235294, + "IoU": 0.4460996837509076, + "TN": 6138.823529411765, + "TP": 206.0, + "n_pred": 239.76470588235293, + "n_ref": 227.41176470588235 + }, + "3": { + "Dice": 0.5914892874283324, + "FN": 14.764705882352942, + "FP": 27.529411764705884, + "IoU": 0.5368137578134796, + "TN": 6137.411764705882, + "TP": 220.2941176470588, + "n_pred": 247.8235294117647, + "n_ref": 235.05882352941177 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 136, + "IoU": 0.0, + "TN": 6264, + "TP": 0, + "n_pred": 136, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8106508875739645, + "FN": 3, + "FP": 61, + "IoU": 0.681592039800995, + "TN": 6199, + "TP": 137, + "n_pred": 198, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8582926128197758, + "FN": 25, + "FP": 468, + "IoU": 0.7517623363544814, + "TN": 4414, + "TP": 1493, + "n_pred": 1961, + "n_ref": 1518 + }, + "2": { + "Dice": 0.9280397022332506, + "FN": 85, + "FP": 31, + "IoU": 0.8657407407407407, + "TN": 5536, + "TP": 748, + "n_pred": 779, + "n_ref": 833 + }, + "3": { + "Dice": 0.8865435356200527, + "FN": 1, + "FP": 42, + "IoU": 0.7962085308056872, + "TN": 6189, + "TP": 168, + "n_pred": 210, + "n_ref": 169 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 175, + "IoU": 0.0, + "TN": 6225, + "TP": 0, + "n_pred": 175, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 21, + "IoU": 0.0, + "TN": 6379, + "TP": 0, + "n_pred": 21, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 9, + "IoU": 0.0, + "TN": 6391, + "TP": 0, + "n_pred": 9, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 21, + "IoU": 0.0, + "TN": 6379, + "TP": 0, + "n_pred": 21, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 49, + "IoU": 0.0, + "TN": 6351, + "TP": 0, + "n_pred": 49, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8327088384394975, + "FN": 108, + "FP": 651, + "IoU": 0.7133685800604229, + "TN": 3752, + "TP": 1889, + "n_pred": 2540, + "n_ref": 1997 + }, + "2": { + "Dice": 0.8920792079207921, + "FN": 131, + "FP": 87, + "IoU": 0.805183199285076, + "TN": 5281, + "TP": 901, + "n_pred": 988, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9222929936305733, + "FN": 82, + "FP": 40, + "IoU": 0.8557919621749409, + "TN": 5554, + "TP": 724, + "n_pred": 764, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9417260880255717, + "FN": 209, + "FP": 28, + "IoU": 0.8898698884758365, + "TN": 4248, + "TP": 1915, + "n_pred": 1943, + "n_ref": 2124 + }, + "2": { + "Dice": 0.9088699878493317, + "FN": 27, + "FP": 48, + "IoU": 0.8329621380846325, + "TN": 5951, + "TP": 374, + "n_pred": 422, + "n_ref": 401 + }, + "3": { + "Dice": 0.768361581920904, + "FN": 41, + "FP": 0, + "IoU": 0.6238532110091743, + "TN": 6291, + "TP": 68, + "n_pred": 68, + "n_ref": 109 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 13, + "IoU": 0.0, + "TN": 6387, + "TP": 0, + "n_pred": 13, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 138, + "IoU": 0.0, + "TN": 6262, + "TP": 0, + "n_pred": 138, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 302, + "IoU": 0.0, + "TN": 6098, + "TP": 0, + "n_pred": 302, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9673758865248226, + "FN": 47, + "FP": 68, + "IoU": 0.9368131868131868, + "TN": 4580, + "TP": 1705, + "n_pred": 1773, + "n_ref": 1752 + }, + "2": { + "Dice": 0.9067567567567567, + "FN": 118, + "FP": 158, + "IoU": 0.8294190358467244, + "TN": 4782, + "TP": 1342, + "n_pred": 1500, + "n_ref": 1460 + }, + "3": { + "Dice": 0.9717376133984648, + "FN": 127, + "FP": 35, + "IoU": 0.9450288428910757, + "TN": 3453, + "TP": 2785, + "n_pred": 2820, + "n_ref": 2912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.46750391324663815, + "FN": 43.333333333333336, + "FP": 42.470588235294116, + "IoU": 0.4232637665389092, + "TN": 6714.1176470588225, + "TP": 353.01960784313724, + "n_pred": 395.4901960784314, + "n_ref": 396.35294117647055 + }, + "mean": { + "1": { + "Dice": 0.33808533061976165, + "FN": 26.235294117647058, + "FP": 44.76470588235294, + "IoU": 0.30553362921763655, + "TN": 6836.0, + "TP": 245.94117647058823, + "n_pred": 290.70588235294116, + "n_ref": 272.1764705882353 + }, + "2": { + "Dice": 0.5378955569189744, + "FN": 94.3529411764706, + "FP": 42.705882352941174, + "IoU": 0.47264163197104003, + "TN": 6589.882352941177, + "TP": 426.0, + "n_pred": 468.70588235294116, + "n_ref": 520.3529411764706 + }, + "3": { + "Dice": 0.5265308522011785, + "FN": 9.411764705882353, + "FP": 39.94117647058823, + "IoU": 0.491616038428051, + "TN": 6716.470588235294, + "TP": 387.11764705882354, + "n_pred": 427.05882352941177, + "n_ref": 396.52941176470586 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9298108488353916, + "FN": 106, + "FP": 343, + "IoU": 0.8688285130002922, + "TN": 9377, + "TP": 2974, + "n_pred": 3317, + "n_ref": 3080 + }, + "2": { + "Dice": 0.8711502199874293, + "FN": 587, + "FP": 28, + "IoU": 0.7717149220489977, + "TN": 10106, + "TP": 2079, + "n_pred": 2107, + "n_ref": 2666 + }, + "3": { + "Dice": 0.9444895748713783, + "FN": 6, + "FP": 199, + "IoU": 0.8948178553104156, + "TN": 10851, + "TP": 1744, + "n_pred": 1943, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.839396628216504, + "FN": 167, + "FP": 195, + "IoU": 0.7232415902140673, + "TN": 5092, + "TP": 946, + "n_pred": 1141, + "n_ref": 1113 + }, + "3": { + "Dice": 0.9730800990916598, + "FN": 0, + "FP": 163, + "IoU": 0.9475715664200708, + "TN": 3291, + "TP": 2946, + "n_pred": 3109, + "n_ref": 2946 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 99, + "IoU": 0.0, + "TN": 6301, + "TP": 0, + "n_pred": 99, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 12, + "IoU": 0.0, + "TN": 6388, + "TP": 0, + "n_pred": 12, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 6390, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 27, + "IoU": 0.0, + "TN": 6373, + "TP": 0, + "n_pred": 27, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8039747064137308, + "FN": 208, + "FP": 9, + "IoU": 0.6722054380664653, + "TN": 5738, + "TP": 445, + "n_pred": 454, + "n_ref": 653 + }, + "2": { + "Dice": 0.8594653743942473, + "FN": 564, + "FP": 335, + "IoU": 0.7535635964912281, + "TN": 2752, + "TP": 2749, + "n_pred": 3084, + "n_ref": 3313 + }, + "3": { + "Dice": 0.8133418858242463, + "FN": 112, + "FP": 179, + "IoU": 0.6854054054054054, + "TN": 5475, + "TP": 634, + "n_pred": 813, + "n_ref": 746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 31, + "IoU": 0.0, + "TN": 6369, + "TP": 0, + "n_pred": 31, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 176, + "IoU": 0.0, + "TN": 6224, + "TP": 0, + "n_pred": 176, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 79, + "IoU": 0.0, + "TN": 6321, + "TP": 0, + "n_pred": 79, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9405940594059405, + "FN": 4, + "FP": 92, + "IoU": 0.8878504672897196, + "TN": 5544, + "TP": 760, + "n_pred": 852, + "n_ref": 764 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 6389, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.030303030303030304, + "FN": 128, + "FP": 0, + "IoU": 0.015384615384615385, + "TN": 6270, + "TP": 2, + "n_pred": 2, + "n_ref": 130 + }, + "2": { + "Dice": 0.8309859154929577, + "FN": 23, + "FP": 49, + "IoU": 0.7108433734939759, + "TN": 6151, + "TP": 177, + "n_pred": 226, + "n_ref": 200 + }, + "3": { + "Dice": 0.0, + "FN": 24, + "FP": 0, + "IoU": 0.0, + "TN": 6376, + "TP": 0, + "n_pred": 0, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 12789, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "2": { + "Dice": 0.9021663172606569, + "FN": 263, + "FP": 17, + "IoU": 0.821769573520051, + "TN": 11229, + "TP": 1291, + "n_pred": 1308, + "n_ref": 1554 + }, + "3": { + "Dice": 0.9548044056209647, + "FN": 18, + "FP": 101, + "IoU": 0.9135174418604651, + "TN": 11424, + "TP": 1257, + "n_pred": 1358, + "n_ref": 1275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.7211735773698537, + "FN": 35.666666666666664, + "FP": 25.705882352941174, + "IoU": 0.6495024596541937, + "TN": 6040.941176470588, + "TP": 297.6862745098039, + "n_pred": 323.3921568627451, + "n_ref": 333.35294117647055 + }, + "mean": { + "1": { + "Dice": 0.6228147083410591, + "FN": 48.94117647058823, + "FP": 12.764705882352942, + "IoU": 0.548078016093836, + "TN": 6009.35294117647, + "TP": 328.94117647058823, + "n_pred": 341.70588235294116, + "n_ref": 377.88235294117646 + }, + "2": { + "Dice": 0.5857988433733344, + "FN": 29.647058823529413, + "FP": 55.94117647058823, + "IoU": 0.48647886443224586, + "TN": 6130.529411764706, + "TP": 183.88235294117646, + "n_pred": 239.8235294117647, + "n_ref": 213.52941176470588 + }, + "3": { + "Dice": 0.9549071803951676, + "FN": 28.41176470588235, + "FP": 8.411764705882353, + "IoU": 0.9139504984364992, + "TN": 5982.941176470588, + "TP": 380.2352941176471, + "n_pred": 388.6470588235294, + "n_ref": 408.6470588235294 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.5, + "FN": 10, + "FP": 2, + "IoU": 0.3333333333333333, + "TN": 6382, + "TP": 6, + "n_pred": 8, + "n_ref": 16 + }, + "2": { + "Dice": 0.7728407388916625, + "FN": 98, + "FP": 357, + "IoU": 0.629780309194467, + "TN": 5171, + "TP": 774, + "n_pred": 1131, + "n_ref": 872 + }, + "3": { + "Dice": 0.941921858500528, + "FN": 275, + "FP": 0, + "IoU": 0.8902195608782435, + "TN": 3895, + "TP": 2230, + "n_pred": 2230, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 6372, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 70, + "IoU": 0.0, + "TN": 6330, + "TP": 0, + "n_pred": 70, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.527001862197393, + "FN": 486, + "FP": 22, + "IoU": 0.3577749683944374, + "TN": 5609, + "TP": 283, + "n_pred": 305, + "n_ref": 769 + }, + "2": { + "Dice": 0.8256595964821521, + "FN": 101, + "FP": 236, + "IoU": 0.7030837004405286, + "TN": 5265, + "TP": 798, + "n_pred": 1034, + "n_ref": 899 + }, + "3": { + "Dice": 0.9447357805566761, + "FN": 119, + "FP": 18, + "IoU": 0.8952599388379205, + "TN": 5092, + "TP": 1171, + "n_pred": 1189, + "n_ref": 1290 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9198717948717948, + "FN": 41, + "FP": 9, + "IoU": 0.8516320474777448, + "TN": 6063, + "TP": 287, + "n_pred": 296, + "n_ref": 328 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.952207223641007, + "FN": 101, + "FP": 30, + "IoU": 0.908774373259053, + "TN": 4964, + "TP": 1305, + "n_pred": 1335, + "n_ref": 1406 + }, + "2": { + "Dice": 0.8158682634730539, + "FN": 126, + "FP": 120, + "IoU": 0.6890012642225032, + "TN": 5609, + "TP": 545, + "n_pred": 665, + "n_ref": 671 + }, + "3": { + "Dice": 0.9634609763227127, + "FN": 0, + "FP": 125, + "IoU": 0.9294980259447264, + "TN": 4627, + "TP": 1648, + "n_pred": 1773, + "n_ref": 1648 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8256880733944955, + "FN": 32, + "FP": 25, + "IoU": 0.703125, + "TN": 6208, + "TP": 135, + "n_pred": 160, + "n_ref": 167 + }, + "2": { + "Dice": 0.5964912280701754, + "FN": 9, + "FP": 14, + "IoU": 0.425, + "TN": 6360, + "TP": 17, + "n_pred": 31, + "n_ref": 26 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9081455805892548, + "FN": 40, + "FP": 13, + "IoU": 0.8317460317460318, + "TN": 6085, + "TP": 262, + "n_pred": 275, + "n_ref": 302 + }, + "2": { + "Dice": 0.8738431563565514, + "FN": 153, + "FP": 106, + "IoU": 0.7759515570934256, + "TN": 5244, + "TP": 897, + "n_pred": 1003, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9695101062007537, + "FN": 89, + "FP": 0, + "IoU": 0.9408244680851063, + "TN": 4896, + "TP": 1415, + "n_pred": 1415, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 22, + "IoU": 0.0, + "TN": 6378, + "TP": 0, + "n_pred": 22, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 18, + "IoU": 0.0, + "TN": 6382, + "TP": 0, + "n_pred": 18, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9724178403755869, + "FN": 122, + "FP": 66, + "IoU": 0.9463163906339235, + "TN": 2898, + "TP": 3314, + "n_pred": 3380, + "n_ref": 3436 + }, + "2": { + "Dice": 0.8016877637130801, + "FN": 17, + "FP": 30, + "IoU": 0.6690140845070423, + "TN": 6258, + "TP": 95, + "n_pred": 125, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8430758245464723, + "FN": 63.64705882352941, + "FP": 40.23529411764706, + "IoU": 0.7672004762563788, + "TN": 5675.313725490196, + "TP": 620.8039215686275, + "n_pred": 661.0392156862745, + "n_ref": 684.4509803921568 + }, + "mean": { + "1": { + "Dice": 0.6987758199425647, + "FN": 69.17647058823529, + "FP": 31.823529411764707, + "IoU": 0.6040400329525081, + "TN": 5865.470588235294, + "TP": 433.52941176470586, + "n_pred": 465.3529411764706, + "n_ref": 502.70588235294116 + }, + "2": { + "Dice": 0.8851041822883593, + "FN": 101.82352941176471, + "FP": 50.8235294117647, + "IoU": 0.7970140340247343, + "TN": 5685.588235294118, + "TP": 561.7647058823529, + "n_pred": 612.5882352941177, + "n_ref": 663.5882352941177 + }, + "3": { + "Dice": 0.9453474714084932, + "FN": 19.941176470588236, + "FP": 38.05882352941177, + "IoU": 0.9005473617918942, + "TN": 5474.882352941177, + "TP": 867.1176470588235, + "n_pred": 905.1764705882352, + "n_ref": 887.0588235294117 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9511520737327189, + "FN": 302, + "FP": 16, + "IoU": 0.9068541300527241, + "TN": 2986, + "TP": 3096, + "n_pred": 3112, + "n_ref": 3398 + }, + "2": { + "Dice": 0.9186602870813397, + "FN": 14, + "FP": 71, + "IoU": 0.8495575221238938, + "TN": 5835, + "TP": 480, + "n_pred": 551, + "n_ref": 494 + }, + "3": { + "Dice": 0.8081632653061225, + "FN": 47, + "FP": 0, + "IoU": 0.678082191780822, + "TN": 6254, + "TP": 99, + "n_pred": 99, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 48, + "FP": 0, + "IoU": 0.0, + "TN": 6352, + "TP": 0, + "n_pred": 0, + "n_ref": 48 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8808484092326887, + "FN": 327, + "FP": 55, + "IoU": 0.7870680044593088, + "TN": 4606, + "TP": 1412, + "n_pred": 1467, + "n_ref": 1739 + }, + "3": { + "Dice": 0.9231426131511529, + "FN": 36, + "FP": 144, + "IoU": 0.8572561459159397, + "TN": 5139, + "TP": 1081, + "n_pred": 1225, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4983957219251337, + "FN": 465, + "FP": 4, + "IoU": 0.3319088319088319, + "TN": 5698, + "TP": 233, + "n_pred": 237, + "n_ref": 698 + }, + "2": { + "Dice": 0.7541315345699832, + "FN": 705, + "FP": 24, + "IoU": 0.6053059014618299, + "TN": 4553, + "TP": 1118, + "n_pred": 1142, + "n_ref": 1823 + }, + "3": { + "Dice": 0.956414978514426, + "FN": 19, + "FP": 52, + "IoU": 0.9164705882352941, + "TN": 5550, + "TP": 779, + "n_pred": 831, + "n_ref": 798 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7605294825511432, + "FN": 69, + "FP": 130, + "IoU": 0.6135922330097088, + "TN": 5885, + "TP": 316, + "n_pred": 446, + "n_ref": 385 + }, + "2": { + "Dice": 0.8870902468636179, + "FN": 115, + "FP": 164, + "IoU": 0.7970909090909091, + "TN": 5025, + "TP": 1096, + "n_pred": 1260, + "n_ref": 1211 + }, + "3": { + "Dice": 0.9655328798185941, + "FN": 103, + "FP": 49, + "IoU": 0.9333625602805787, + "TN": 4119, + "TP": 2129, + "n_pred": 2178, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.696969696969697, + "FN": 1, + "FP": 19, + "IoU": 0.5348837209302325, + "TN": 6357, + "TP": 23, + "n_pred": 42, + "n_ref": 24 + }, + "2": { + "Dice": 0.9187192118226601, + "FN": 196, + "FP": 68, + "IoU": 0.8496583143507973, + "TN": 4644, + "TP": 1492, + "n_pred": 1560, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9775280898876404, + "FN": 58, + "FP": 142, + "IoU": 0.9560439560439561, + "TN": 1850, + "TP": 4350, + "n_pred": 4492, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9094540612516645, + "FN": 99, + "FP": 37, + "IoU": 0.833943833943834, + "TN": 5581, + "TP": 683, + "n_pred": 720, + "n_ref": 782 + }, + "3": { + "Dice": 0.9801285797779077, + "FN": 6, + "FP": 62, + "IoU": 0.9610315186246419, + "TN": 4655, + "TP": 1677, + "n_pred": 1739, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8167406467977172, + "FN": 174, + "FP": 115, + "IoU": 0.6902465166130761, + "TN": 5467, + "TP": 644, + "n_pred": 759, + "n_ref": 818 + }, + "2": { + "Dice": 0.87943971985993, + "FN": 128, + "FP": 113, + "IoU": 0.7848214285714286, + "TN": 5280, + "TP": 879, + "n_pred": 992, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9581519919651824, + "FN": 6, + "FP": 119, + "IoU": 0.9196658097686375, + "TN": 4844, + "TP": 1431, + "n_pred": 1550, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9731762346452745, + "FN": 24, + "FP": 83, + "IoU": 0.94775390625, + "TN": 4352, + "TP": 1941, + "n_pred": 2024, + "n_ref": 1965 + }, + "2": { + "Dice": 0.9082172032676598, + "FN": 72, + "FP": 119, + "IoU": 0.8318661971830986, + "TN": 5264, + "TP": 945, + "n_pred": 1064, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9882451721242653, + "FN": 17, + "FP": 39, + "IoU": 0.9767634854771784, + "TN": 3990, + "TP": 2354, + "n_pred": 2393, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8932427029188325, + "FN": 93, + "FP": 174, + "IoU": 0.8070809248554913, + "TN": 5016, + "TP": 1117, + "n_pred": 1291, + "n_ref": 1210 + }, + "2": { + "Dice": 0.9093769666456891, + "FN": 75, + "FP": 213, + "IoU": 0.8338141950375072, + "TN": 4667, + "TP": 1445, + "n_pred": 1658, + "n_ref": 1520 + }, + "3": { + "Dice": 0.9508196721311475, + "FN": 47, + "FP": 40, + "IoU": 0.90625, + "TN": 5472, + "TP": 841, + "n_pred": 881, + "n_ref": 888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676798/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.6708818078720395, + "FN": 58.59259259259259, + "FP": 44.51503267973855, + "IoU": 0.6023951806679158, + "TN": 6159.703921568626, + "TP": 429.9989106753813, + "n_pred": 474.51394335511986, + "n_ref": 488.5915032679738 + }, + "mean": { + "1": { + "Dice": 0.5703758092698447, + "FN": 61.75816993464052, + "FP": 46.55424836601306, + "IoU": 0.49818296746172647, + "TN": 6222.005882352942, + "TP": 362.4921568627451, + "n_pred": 409.04640522875815, + "n_ref": 424.2503267973856 + }, + "2": { + "Dice": 0.661478707808371, + "FN": 75.40261437908495, + "FP": 51.01372549019608, + "IoU": 0.5779229913509548, + "TN": 6207.931372549019, + "TP": 358.4627450980392, + "n_pred": 409.4764705882353, + "n_ref": 433.8653594771242 + }, + "3": { + "Dice": 0.7807909065379033, + "FN": 38.616993464052285, + "FP": 35.97712418300653, + "IoU": 0.7310795831910661, + "TN": 6049.174509803922, + "TP": 569.0418300653595, + "n_pred": 605.018954248366, + "n_ref": 607.6588235294117 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_001/summary.json b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_001/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..24800378a8be11ef38e3eb18430b6b0e6e150656 --- /dev/null +++ b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_001/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8592590321216357, + "FN": 1290.1466666666668, + "FP": 1017.2400000000001, + "IoU": 0.7687281142582428, + "TN": 843217.2866666666, + "TP": 8903.966666666667, + "n_pred": 9921.206666666667, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8276684417623179, + "FN": 1649.48, + "FP": 1039.28, + "IoU": 0.7203904889842676, + "TN": 843535.3, + "TP": 8204.58, + "n_pred": 9243.86, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8331662762354951, + "FN": 1564.64, + "FP": 1341.94, + "IoU": 0.727833716819211, + "TN": 843031.2, + "TP": 8490.86, + "n_pred": 9832.8, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9169423783670938, + "FN": 656.32, + "FP": 670.5, + "IoU": 0.8579601369712502, + "TN": 843085.36, + "TP": 10016.46, + "n_pred": 10686.96, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9326302945790483, + "FN": 745, + "FP": 801, + "IoU": 0.8737650036743693, + "TN": 1093673, + "TP": 10701, + "n_pred": 11502, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8505246902748044, + "FN": 1339, + "FP": 2920, + "IoU": 0.7399242794333171, + "TN": 1089544, + "TP": 12117, + "n_pred": 15037, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9401329480936698, + "FN": 943, + "FP": 2020, + "IoU": 0.8870291291749276, + "TN": 1079692, + "TP": 23265, + "n_pred": 25285, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8370816362670445, + "FN": 151, + "FP": 1689, + "IoU": 0.7198111770976092, + "TN": 1099353, + "TP": 4727, + "n_pred": 6416, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8552519618039142, + "FN": 2411, + "FP": 2182, + "IoU": 0.7471093491906178, + "TN": 1087758, + "TP": 13569, + "n_pred": 15751, + "n_ref": 15980 + }, + "3": { + "Dice": 0.925166472888701, + "FN": 976, + "FP": 1856, + "IoU": 0.8607532697413708, + "TN": 1085582, + "TP": 17506, + "n_pred": 19362, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.840352099297068, + "FN": 2235, + "FP": 286, + "IoU": 0.7246614242027086, + "TN": 900284, + "TP": 6635, + "n_pred": 6921, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8875887060244602, + "FN": 2029, + "FP": 949, + "IoU": 0.7978961655921276, + "TN": 894705, + "TP": 11757, + "n_pred": 12706, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9693665628245067, + "FN": 875, + "FP": 423, + "IoU": 0.9405541561712847, + "TN": 887605, + "TP": 20537, + "n_pred": 20960, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7079013228459063, + "FN": 3018, + "FP": 250, + "IoU": 0.5478693967902601, + "TN": 902212, + "TP": 3960, + "n_pred": 4210, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8767696838519675, + "FN": 1969, + "FP": 1504, + "IoU": 0.7805787212534748, + "TN": 893612, + "TP": 12355, + "n_pred": 13859, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9658701213869686, + "FN": 890, + "FP": 364, + "IoU": 0.9339930519002, + "TN": 890442, + "TP": 17744, + "n_pred": 18108, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9400089826122292, + "FN": 2202, + "FP": 603, + "IoU": 0.8868084419514951, + "TN": 1400979, + "TP": 21976, + "n_pred": 22579, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8647058823529412, + "FN": 2148, + "FP": 1900, + "IoU": 0.7616580310880829, + "TN": 1408776, + "TP": 12936, + "n_pred": 14836, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9591019734856867, + "FN": 1438, + "FP": 595, + "IoU": 0.9214178037184493, + "TN": 1399889, + "TP": 23838, + "n_pred": 24433, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8592259649306191, + "FN": 1110, + "FP": 4277, + "IoU": 0.7531955834516882, + "TN": 1403933, + "TP": 16440, + "n_pred": 20717, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8627815184583236, + "FN": 2062, + "FP": 2075, + "IoU": 0.7586770110249081, + "TN": 1408617, + "TP": 13006, + "n_pred": 15081, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9535811709538518, + "FN": 1551, + "FP": 508, + "IoU": 0.9112805928990003, + "TN": 1402552, + "TP": 21149, + "n_pred": 21657, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9290874736023119, + "FN": 899, + "FP": 377, + "IoU": 0.8675661650233524, + "TN": 752413, + "TP": 8359, + "n_pred": 8736, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8555483311660165, + "FN": 1515, + "FP": 1151, + "IoU": 0.7475617839219771, + "TN": 751487, + "TP": 7895, + "n_pred": 9046, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9681230846997125, + "FN": 694, + "FP": 315, + "IoU": 0.9382156634621273, + "TN": 745717, + "TP": 15322, + "n_pred": 15637, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8185840707964602, + "FN": 1033, + "FP": 689, + "IoU": 0.6928838951310862, + "TN": 756441, + "TP": 3885, + "n_pred": 4574, + "n_ref": 4918 + }, + "2": { + "Dice": 0.7788237577639752, + "FN": 3213, + "FP": 1345, + "IoU": 0.6377652388142733, + "TN": 749465, + "TP": 8025, + "n_pred": 9370, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9412598564720475, + "FN": 1288, + "FP": 38, + "IoU": 0.8890376569037657, + "TN": 750098, + "TP": 10624, + "n_pred": 10662, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.839617240533246, + "FN": 3578, + "FP": 344, + "IoU": 0.7235692134197914, + "TN": 1064084, + "TP": 10266, + "n_pred": 10610, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8602443703928102, + "FN": 1351, + "FP": 1417, + "IoU": 0.7547621157083371, + "TN": 1066985, + "TP": 8519, + "n_pred": 9936, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9596776434625538, + "FN": 1137, + "FP": 314, + "IoU": 0.9224810342985361, + "TN": 1059554, + "TP": 17267, + "n_pred": 17581, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8464754825357942, + "FN": 3275, + "FP": 360, + "IoU": 0.7338166373755126, + "TN": 1064616, + "TP": 10021, + "n_pred": 10381, + "n_ref": 13296 + }, + "2": { + "Dice": 0.849600688632777, + "FN": 1917, + "FP": 1228, + "IoU": 0.7385267708679747, + "TN": 1066244, + "TP": 8883, + "n_pred": 10111, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9389473684210526, + "FN": 1177, + "FP": 650, + "IoU": 0.8849206349206349, + "TN": 1062396, + "TP": 14049, + "n_pred": 14699, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9161163248754489, + "FN": 1225, + "FP": 223, + "IoU": 0.8452164617851416, + "TN": 1096565, + "TP": 7907, + "n_pred": 8130, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8456030997304582, + "FN": 1443, + "FP": 2223, + "IoU": 0.732506384531193, + "TN": 1092215, + "TP": 10039, + "n_pred": 12262, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9009787720859286, + "FN": 864, + "FP": 1473, + "IoU": 0.8198010640758733, + "TN": 1092951, + "TP": 10632, + "n_pred": 12105, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8612908868287563, + "FN": 590, + "FP": 203, + "IoU": 0.7563748079877112, + "TN": 1102665, + "TP": 2462, + "n_pred": 2665, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8684640833555158, + "FN": 933, + "FP": 2526, + "IoU": 0.7675090738002419, + "TN": 1091042, + "TP": 11419, + "n_pred": 13945, + "n_ref": 12352 + }, + "3": { + "Dice": 0.80158940397351, + "FN": 254, + "FP": 1244, + "IoU": 0.6688770999115826, + "TN": 1101396, + "TP": 3026, + "n_pred": 4270, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9001854857407837, + "FN": 1399, + "FP": 323, + "IoU": 0.8184884578897439, + "TN": 1137393, + "TP": 7765, + "n_pred": 8088, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9147530989636253, + "FN": 1410, + "FP": 1946, + "IoU": 0.8428986049995318, + "TN": 1125518, + "TP": 18006, + "n_pred": 19952, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9330068217596642, + "FN": 1262, + "FP": 270, + "IoU": 0.8744262295081967, + "TN": 1134680, + "TP": 10668, + "n_pred": 10938, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5414624583415016, + "FN": 1085, + "FP": 1254, + "IoU": 0.3712365591397849, + "TN": 1143160, + "TP": 1381, + "n_pred": 2635, + "n_ref": 2466 + }, + "2": { + "Dice": 0.7206106870229008, + "FN": 8388, + "FP": 4056, + "IoU": 0.5632458233890215, + "TN": 1118388, + "TP": 16048, + "n_pred": 20104, + "n_ref": 24436 + }, + "3": { + "Dice": 0.4149166151945645, + "FN": 29, + "FP": 7549, + "IoU": 0.2617632732586459, + "TN": 1136615, + "TP": 2687, + "n_pred": 10236, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9457631499590746, + "FN": 869, + "FP": 390, + "IoU": 0.8971068976789801, + "TN": 788564, + "TP": 10977, + "n_pred": 11367, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8685491723466408, + "FN": 1052, + "FP": 1243, + "IoU": 0.7676419965576592, + "TN": 790923, + "TP": 7582, + "n_pred": 8825, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9517837070342543, + "FN": 609, + "FP": 206, + "IoU": 0.9080031606276103, + "TN": 791941, + "TP": 8044, + "n_pred": 8250, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7043765483071841, + "FN": 527, + "FP": 2337, + "IoU": 0.5436583811344805, + "TN": 794524, + "TP": 3412, + "n_pred": 5749, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9035215839013307, + "FN": 1517, + "FP": 861, + "IoU": 0.8240213128098868, + "TN": 787287, + "TP": 11135, + "n_pred": 11996, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8965401410816258, + "FN": 177, + "FP": 439, + "IoU": 0.8124809741248098, + "TN": 797515, + "TP": 2669, + "n_pred": 3108, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9498669799260616, + "FN": 446, + "FP": 1005, + "IoU": 0.9045206290715273, + "TN": 1332643, + "TP": 13746, + "n_pred": 14751, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8914753945714419, + "FN": 1032, + "FP": 1299, + "IoU": 0.80419991600168, + "TN": 1335935, + "TP": 9574, + "n_pred": 10873, + "n_ref": 10606 + }, + "3": { + "Dice": 0.974722117421714, + "FN": 535, + "FP": 336, + "IoU": 0.9506906702898551, + "TN": 1330176, + "TP": 16793, + "n_pred": 17129, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7409388792296375, + "FN": 328, + "FP": 3546, + "IoU": 0.5884852347567453, + "TN": 1338426, + "TP": 5540, + "n_pred": 9086, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8709462830533843, + "FN": 1640, + "FP": 1464, + "IoU": 0.7713949035204006, + "TN": 1334262, + "TP": 10474, + "n_pred": 11938, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9546084546084546, + "FN": 598, + "FP": 450, + "IoU": 0.9131587669870732, + "TN": 1335772, + "TP": 11020, + "n_pred": 11470, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8197709463532248, + "FN": 1582, + "FP": 3202, + "IoU": 0.6945863125638406, + "TN": 836304, + "TP": 10880, + "n_pred": 14082, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8458063853813776, + "FN": 1209, + "FP": 1795, + "IoU": 0.7328115271724629, + "TN": 840725, + "TP": 8239, + "n_pred": 10034, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9666520403685828, + "FN": 864, + "FP": 352, + "IoU": 0.9354564755838641, + "TN": 833128, + "TP": 17624, + "n_pred": 17976, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.893124772644598, + "FN": 800, + "FP": 669, + "IoU": 0.8068883922702774, + "TN": 844361, + "TP": 6138, + "n_pred": 6807, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8694949494949495, + "FN": 1608, + "FP": 1299, + "IoU": 0.7691208005718371, + "TN": 839377, + "TP": 9684, + "n_pred": 10983, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9574784651527016, + "FN": 769, + "FP": 317, + "IoU": 0.9184255990385337, + "TN": 838655, + "TP": 12227, + "n_pred": 12544, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7295366401306389, + "FN": 2282, + "FP": 368, + "IoU": 0.574228791773779, + "TN": 845744, + "TP": 3574, + "n_pred": 3942, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8605802600527509, + "FN": 1421, + "FP": 1592, + "IoU": 0.7552794022092267, + "TN": 839656, + "TP": 9299, + "n_pred": 10891, + "n_ref": 10720 + }, + "3": { + "Dice": 0.938315780913268, + "FN": 1418, + "FP": 99, + "IoU": 0.8837993106089621, + "TN": 838913, + "TP": 11538, + "n_pred": 11637, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8462461021827776, + "FN": 340, + "FP": 301, + "IoU": 0.7334719334719335, + "TN": 849563, + "TP": 1764, + "n_pred": 2065, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8921500874019269, + "FN": 1613, + "FP": 1040, + "IoU": 0.8052986936738588, + "TN": 838342, + "TP": 10973, + "n_pred": 12013, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9505974264705882, + "FN": 472, + "FP": 388, + "IoU": 0.9058462885920736, + "TN": 842834, + "TP": 8274, + "n_pred": 8662, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8714738845421865, + "FN": 2785, + "FP": 254, + "IoU": 0.7722230550142407, + "TN": 783698, + "TP": 10303, + "n_pred": 10557, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8047562959223736, + "FN": 1680, + "FP": 1801, + "IoU": 0.6732989206945096, + "TN": 786385, + "TP": 7174, + "n_pred": 8975, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9382792295518586, + "FN": 1304, + "FP": 295, + "IoU": 0.8837344579364502, + "TN": 783287, + "TP": 12154, + "n_pred": 12449, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8412388392857143, + "FN": 1638, + "FP": 638, + "IoU": 0.72598121839634, + "TN": 788734, + "TP": 6030, + "n_pred": 6668, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8512315270935961, + "FN": 1414, + "FP": 1455, + "IoU": 0.7409948542024014, + "TN": 785963, + "TP": 8208, + "n_pred": 9663, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9348209711390676, + "FN": 821, + "FP": 324, + "IoU": 0.8776186404446344, + "TN": 787684, + "TP": 8211, + "n_pred": 8535, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9038261009063929, + "FN": 1200, + "FP": 1198, + "IoU": 0.8245280257573541, + "TN": 883004, + "TP": 11268, + "n_pred": 12466, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8553045329205167, + "FN": 1498, + "FP": 1493, + "IoU": 0.7471895866790634, + "TN": 884839, + "TP": 8840, + "n_pred": 10333, + "n_ref": 10338 + }, + "3": { + "Dice": 0.939968921239879, + "FN": 759, + "FP": 709, + "IoU": 0.8867371344803642, + "TN": 883709, + "TP": 11493, + "n_pred": 12202, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7821266032271411, + "FN": 1630, + "FP": 1003, + "IoU": 0.6422068215790189, + "TN": 889311, + "TP": 4726, + "n_pred": 5729, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8876931088352716, + "FN": 1290, + "FP": 1298, + "IoU": 0.7980649188514357, + "TN": 883854, + "TP": 10228, + "n_pred": 11526, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9212803793716656, + "FN": 1055, + "FP": 273, + "IoU": 0.8540498955929223, + "TN": 887571, + "TP": 7771, + "n_pred": 8044, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9517321221836317, + "FN": 533, + "FP": 551, + "IoU": 0.9079092685413304, + "TN": 750277, + "TP": 10687, + "n_pred": 11238, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8994856943126779, + "FN": 1405, + "FP": 608, + "IoU": 0.8173321234119783, + "TN": 751028, + "TP": 9007, + "n_pred": 9615, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9664617341530634, + "FN": 355, + "FP": 436, + "IoU": 0.9351000984574992, + "TN": 749860, + "TP": 11397, + "n_pred": 11833, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8746484040601687, + "FN": 216, + "FP": 809, + "IoU": 0.7772223429689198, + "TN": 757447, + "TP": 3576, + "n_pred": 4385, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8902590489709014, + "FN": 1597, + "FP": 877, + "IoU": 0.8022223998720921, + "TN": 749539, + "TP": 10035, + "n_pred": 10912, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9430220512061566, + "FN": 462, + "FP": 308, + "IoU": 0.8921870624474937, + "TN": 754906, + "TP": 6372, + "n_pred": 6680, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8300650083275131, + "FN": 217, + "FP": 2946, + "IoU": 0.7094966936076414, + "TN": 984440, + "TP": 7725, + "n_pred": 10671, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8091822094691535, + "FN": 1134, + "FP": 2457, + "IoU": 0.6795180722891566, + "TN": 984123, + "TP": 7614, + "n_pred": 10071, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9675251959686451, + "FN": 130, + "FP": 972, + "IoU": 0.9370932754880694, + "TN": 977810, + "TP": 16416, + "n_pred": 17388, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7057404727448143, + "FN": 316, + "FP": 2124, + "IoU": 0.5452851285874022, + "TN": 989962, + "TP": 2926, + "n_pred": 5050, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8000642020223637, + "FN": 857, + "FP": 2880, + "IoU": 0.6667558409131443, + "TN": 984114, + "TP": 7477, + "n_pred": 10357, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9121055446603673, + "FN": 382, + "FP": 1590, + "IoU": 0.8384136348738118, + "TN": 983124, + "TP": 10232, + "n_pred": 11822, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9475074046319095, + "FN": 1048, + "FP": 423, + "IoU": 0.900250898487828, + "TN": 743269, + "TP": 13276, + "n_pred": 13699, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9041888451747281, + "FN": 998, + "FP": 658, + "IoU": 0.8251319957761352, + "TN": 748546, + "TP": 7814, + "n_pred": 8472, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9757104581192076, + "FN": 195, + "FP": 358, + "IoU": 0.9525728987993138, + "TN": 746356, + "TP": 11107, + "n_pred": 11465, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7662580864828056, + "FN": 735, + "FP": 2011, + "IoU": 0.6210845867255416, + "TN": 750769, + "TP": 4501, + "n_pred": 6512, + "n_ref": 5236 + }, + "2": { + "Dice": 0.910536142971459, + "FN": 798, + "FP": 879, + "IoU": 0.8357653510919596, + "TN": 747805, + "TP": 8534, + "n_pred": 9413, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9201889306043357, + "FN": 393, + "FP": 266, + "IoU": 0.8521758636159713, + "TN": 753558, + "TP": 3799, + "n_pred": 4065, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9393305439330544, + "FN": 762, + "FP": 166, + "IoU": 0.8856015779092702, + "TN": 630864, + "TP": 7184, + "n_pred": 7350, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8794995013147158, + "FN": 516, + "FP": 813, + "IoU": 0.7849166531801263, + "TN": 632797, + "TP": 4850, + "n_pred": 5663, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9534246575342465, + "FN": 548, + "FP": 115, + "IoU": 0.9109947643979057, + "TN": 631527, + "TP": 6786, + "n_pred": 6901, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6996378169102035, + "FN": 219, + "FP": 2186, + "IoU": 0.538033038801383, + "TN": 633770, + "TP": 2801, + "n_pred": 4987, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9310484415058696, + "FN": 452, + "FP": 570, + "IoU": 0.8709921736935118, + "TN": 631054, + "TP": 6900, + "n_pred": 7470, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9270401729418123, + "FN": 183, + "FP": 222, + "IoU": 0.8640026863666891, + "TN": 635998, + "TP": 2573, + "n_pred": 2795, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9045833333333333, + "FN": 2414, + "FP": 334, + "IoU": 0.8257892734880182, + "TN": 967266, + "TP": 13026, + "n_pred": 13360, + "n_ref": 15440 + }, + "2": { + "Dice": 0.864494503869473, + "FN": 1127, + "FP": 1622, + "IoU": 0.7613300920298663, + "TN": 971522, + "TP": 8769, + "n_pred": 10391, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9680666049953747, + "FN": 137, + "FP": 726, + "IoU": 0.9381095811818704, + "TN": 969096, + "TP": 13081, + "n_pred": 13807, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8377851140456183, + "FN": 605, + "FP": 1557, + "IoU": 0.7208521626856036, + "TN": 975295, + "TP": 5583, + "n_pred": 7140, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9040448774726897, + "FN": 770, + "FP": 1180, + "IoU": 0.8248922413793104, + "TN": 971904, + "TP": 9186, + "n_pred": 10366, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9141958316948486, + "FN": 178, + "FP": 913, + "IoU": 0.841952774156164, + "TN": 976137, + "TP": 5812, + "n_pred": 6725, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9246250358246028, + "FN": 1662, + "FP": 705, + "IoU": 0.8598164050932781, + "TN": 1031691, + "TP": 14518, + "n_pred": 15223, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8903624613655521, + "FN": 786, + "FP": 1165, + "IoU": 0.8023903575407677, + "TN": 1038703, + "TP": 7922, + "n_pred": 9087, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9689850006097314, + "FN": 341, + "FP": 422, + "IoU": 0.9398359880145087, + "TN": 1035894, + "TP": 11919, + "n_pred": 12341, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8302693458743052, + "FN": 575, + "FP": 1410, + "IoU": 0.7097953216374269, + "TN": 1041736, + "TP": 4855, + "n_pred": 6265, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8660256090877385, + "FN": 1631, + "FP": 1058, + "IoU": 0.7637082601054481, + "TN": 1037196, + "TP": 8691, + "n_pred": 9749, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9378340922589586, + "FN": 343, + "FP": 285, + "IoU": 0.8829450139794968, + "TN": 1043211, + "TP": 4737, + "n_pred": 5022, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7815005575319918, + "FN": 3803, + "FP": 312, + "IoU": 0.6413630817500435, + "TN": 477742, + "TP": 7359, + "n_pred": 7671, + "n_ref": 11162 + }, + "2": { + "Dice": 0.76839422259983, + "FN": 456, + "FP": 907, + "IoU": 0.6238962472406181, + "TN": 485592, + "TP": 2261, + "n_pred": 3168, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9518839369585638, + "FN": 91, + "FP": 370, + "IoU": 0.9081856203943438, + "TN": 484195, + "TP": 4560, + "n_pred": 4930, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8027441348352672, + "FN": 1912, + "FP": 417, + "IoU": 0.670486700622524, + "TN": 482148, + "TP": 4739, + "n_pred": 5156, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8542713567839196, + "FN": 555, + "FP": 402, + "IoU": 0.7456140350877193, + "TN": 485454, + "TP": 2805, + "n_pred": 3207, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8789260385005065, + "FN": 55, + "FP": 423, + "IoU": 0.7840036150022593, + "TN": 487003, + "TP": 1735, + "n_pred": 2158, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.894062408295021, + "FN": 2166, + "FP": 1083, + "IoU": 0.8084203078011675, + "TN": 463521, + "TP": 13710, + "n_pred": 14793, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8096809680968097, + "FN": 839, + "FP": 891, + "IoU": 0.6802218114602587, + "TN": 475070, + "TP": 3680, + "n_pred": 4571, + "n_ref": 4519 + }, + "3": { + "Dice": 0.945866913914842, + "FN": 329, + "FP": 430, + "IoU": 0.8972936400541272, + "TN": 473090, + "TP": 6631, + "n_pred": 7061, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8752908329455561, + "FN": 2206, + "FP": 474, + "IoU": 0.7782374844848986, + "TN": 468395, + "TP": 9405, + "n_pred": 9879, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8159796835319398, + "FN": 1485, + "FP": 399, + "IoU": 0.6891602045867019, + "TN": 474419, + "TP": 4177, + "n_pred": 4576, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8761319534282018, + "FN": 97, + "FP": 669, + "IoU": 0.779568345323741, + "TN": 477005, + "TP": 2709, + "n_pred": 3378, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8695979967150435, + "FN": 4524, + "FP": 319, + "IoU": 0.7692820732694965, + "TN": 623649, + "TP": 16148, + "n_pred": 16467, + "n_ref": 20672 + }, + "2": { + "Dice": 0.78475410742933, + "FN": 1973, + "FP": 1918, + "IoU": 0.6457574654042243, + "TN": 633656, + "TP": 7093, + "n_pred": 9011, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9451751920554619, + "FN": 1387, + "FP": 76, + "IoU": 0.8960494528918573, + "TN": 630566, + "TP": 12611, + "n_pred": 12687, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7886005954912803, + "FN": 5135, + "FP": 332, + "IoU": 0.6509831460674157, + "TN": 628976, + "TP": 10197, + "n_pred": 10529, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8536606984577203, + "FN": 2535, + "FP": 767, + "IoU": 0.7446841413438491, + "TN": 631707, + "TP": 9631, + "n_pred": 10398, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9324459234608985, + "FN": 557, + "FP": 458, + "IoU": 0.8734413965087282, + "TN": 636620, + "TP": 7005, + "n_pred": 7463, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8682125882183495, + "FN": 3968, + "FP": 1522, + "IoU": 0.7671163145838635, + "TN": 540906, + "TP": 18084, + "n_pred": 19606, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7630153121319199, + "FN": 1230, + "FP": 782, + "IoU": 0.616834888592649, + "TN": 559229, + "TP": 3239, + "n_pred": 4021, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9481974771082794, + "FN": 493, + "FP": 316, + "IoU": 0.9014976257153293, + "TN": 556267, + "TP": 7404, + "n_pred": 7720, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7273769210731962, + "FN": 1451, + "FP": 3782, + "IoU": 0.5715572294088751, + "TN": 552266, + "TP": 6981, + "n_pred": 10763, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8471330878485008, + "FN": 837, + "FP": 616, + "IoU": 0.7348056214637707, + "TN": 559001, + "TP": 4026, + "n_pred": 4642, + "n_ref": 4863 + }, + "3": { + "Dice": 0.9023652365236524, + "FN": 171, + "FP": 539, + "IoU": 0.8220997243798547, + "TN": 560489, + "TP": 3281, + "n_pred": 3820, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.35254821678698417, + "FN": 5939, + "FP": 70, + "IoU": 0.21399607586657945, + "TN": 411235, + "TP": 1636, + "n_pred": 1706, + "n_ref": 7575 + }, + "2": { + "Dice": 0.11533420707732635, + "FN": 2680, + "FP": 20, + "IoU": 0.061196105702364396, + "TN": 416004, + "TP": 176, + "n_pred": 196, + "n_ref": 2856 + }, + "3": { + "Dice": 0.5233390119250426, + "FN": 2663, + "FP": 135, + "IoU": 0.3544070143054915, + "TN": 414546, + "TP": 1536, + "n_pred": 1671, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5509796081567373, + "FN": 2670, + "FP": 699, + "IoU": 0.380242825607064, + "TN": 413444, + "TP": 2067, + "n_pred": 2766, + "n_ref": 4737 + }, + "2": { + "Dice": 0.44714038128249567, + "FN": 2090, + "FP": 143, + "IoU": 0.28794642857142855, + "TN": 415744, + "TP": 903, + "n_pred": 1046, + "n_ref": 2993 + }, + "3": { + "Dice": 0.831581117295403, + "FN": 366, + "FP": 451, + "IoU": 0.7117148906139732, + "TN": 416046, + "TP": 2017, + "n_pred": 2468, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9538563438327936, + "FN": 605, + "FP": 649, + "IoU": 0.9117833274709813, + "TN": 482295, + "TP": 12961, + "n_pred": 13610, + "n_ref": 13566 + }, + "2": { + "Dice": 0.873883482202373, + "FN": 1117, + "FP": 775, + "IoU": 0.7760151533088671, + "TN": 488063, + "TP": 6555, + "n_pred": 7330, + "n_ref": 7672 + }, + "3": { + "Dice": 0.952772585669782, + "FN": 126, + "FP": 632, + "IoU": 0.9098048548310328, + "TN": 488106, + "TP": 7646, + "n_pred": 8278, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9081600254008573, + "FN": 1821, + "FP": 493, + "IoU": 0.8317702653580517, + "TN": 482755, + "TP": 11441, + "n_pred": 11934, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8830946260252173, + "FN": 1262, + "FP": 648, + "IoU": 0.7906619903551074, + "TN": 487386, + "TP": 7214, + "n_pred": 7862, + "n_ref": 8476 + }, + "3": { + "Dice": 0.9071068067112263, + "FN": 75, + "FP": 606, + "IoU": 0.8300049925112332, + "TN": 492504, + "TP": 3325, + "n_pred": 3931, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2676860/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_002/summary.json b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_002/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..a1e61b7a070c443217c1ea3a0d34a888e9075a61 --- /dev/null +++ b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_002/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8901582939432408, + "FN": 957.5999999999999, + "FP": 938.2600000000001, + "IoU": 0.8088796942428607, + "TN": 843296.2666666666, + "TP": 9236.513333333332, + "n_pred": 10174.773333333333, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8716701243092673, + "FN": 1049.32, + "FP": 1054.08, + "IoU": 0.780081059797224, + "TN": 843520.5, + "TP": 8804.74, + "n_pred": 9858.82, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8652513401480688, + "FN": 1295.54, + "FP": 1201.72, + "IoU": 0.7661326389615846, + "TN": 843171.42, + "TP": 8759.96, + "n_pred": 9961.68, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9335534173723861, + "FN": 527.94, + "FP": 558.98, + "IoU": 0.8804253839697737, + "TN": 843196.88, + "TP": 10144.84, + "n_pred": 10703.82, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.933083123640551, + "FN": 507, + "FP": 1062, + "IoU": 0.8745602814198913, + "TN": 1093412, + "TP": 10939, + "n_pred": 12001, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8545828539553045, + "FN": 1200, + "FP": 2971, + "IoU": 0.7460887563158215, + "TN": 1089493, + "TP": 12256, + "n_pred": 15227, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9436836528657964, + "FN": 606, + "FP": 2211, + "IoU": 0.8933721942541353, + "TN": 1079501, + "TP": 23602, + "n_pred": 25813, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8410301178524662, + "FN": 61, + "FP": 1760, + "IoU": 0.7256703826453751, + "TN": 1099282, + "TP": 4817, + "n_pred": 6577, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8736746059214046, + "FN": 2096, + "FP": 1919, + "IoU": 0.7756857925023745, + "TN": 1088021, + "TP": 13884, + "n_pred": 15803, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9289671754129207, + "FN": 709, + "FP": 2009, + "IoU": 0.8673564003708946, + "TN": 1085429, + "TP": 17773, + "n_pred": 19782, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9178840716305372, + "FN": 1079, + "FP": 315, + "IoU": 0.8482308111050626, + "TN": 900255, + "TP": 7791, + "n_pred": 8106, + "n_ref": 8870 + }, + "2": { + "Dice": 0.9015695067264574, + "FN": 1723, + "FP": 911, + "IoU": 0.8207797509695857, + "TN": 894743, + "TP": 12063, + "n_pred": 12974, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9732261447046487, + "FN": 529, + "FP": 620, + "IoU": 0.9478485838779956, + "TN": 887408, + "TP": 20883, + "n_pred": 21503, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7750415973377703, + "FN": 2320, + "FP": 384, + "IoU": 0.6327085031241511, + "TN": 902078, + "TP": 4658, + "n_pred": 5042, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8855092033259896, + "FN": 1864, + "FP": 1358, + "IoU": 0.7945415125621732, + "TN": 893758, + "TP": 12460, + "n_pred": 13818, + "n_ref": 14324 + }, + "3": { + "Dice": 0.96860865090328, + "FN": 753, + "FP": 406, + "IoU": 0.9391281512605042, + "TN": 890400, + "TP": 17881, + "n_pred": 18287, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9561500448299589, + "FN": 1250, + "FP": 853, + "IoU": 0.9159841796172746, + "TN": 1400729, + "TP": 22928, + "n_pred": 23781, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8989265666546302, + "FN": 1392, + "FP": 1687, + "IoU": 0.8164092779202194, + "TN": 1408989, + "TP": 13692, + "n_pred": 15379, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9752870054939645, + "FN": 512, + "FP": 743, + "IoU": 0.9517660171413198, + "TN": 1399741, + "TP": 24764, + "n_pred": 25507, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9200844064495185, + "FN": 545, + "FP": 2409, + "IoU": 0.8519965930156822, + "TN": 1405801, + "TP": 17005, + "n_pred": 19414, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8991201013019903, + "FN": 1222, + "FP": 1885, + "IoU": 0.8167286026072081, + "TN": 1408807, + "TP": 13846, + "n_pred": 15731, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9708114806700746, + "FN": 765, + "FP": 554, + "IoU": 0.9432785757289068, + "TN": 1402506, + "TP": 21935, + "n_pred": 22489, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9103914827547965, + "FN": 1049, + "FP": 567, + "IoU": 0.8355216284987277, + "TN": 752223, + "TP": 8209, + "n_pred": 8776, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8727059325650875, + "FN": 1231, + "FP": 1155, + "IoU": 0.7741599621391386, + "TN": 751483, + "TP": 8179, + "n_pred": 9334, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9697064237356877, + "FN": 475, + "FP": 496, + "IoU": 0.9411942829457365, + "TN": 745536, + "TP": 15541, + "n_pred": 16037, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8004030226700252, + "FN": 946, + "FP": 1035, + "IoU": 0.667226608432723, + "TN": 756095, + "TP": 3972, + "n_pred": 5007, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8132955473365675, + "FN": 2772, + "FP": 1115, + "IoU": 0.6853395936209827, + "TN": 749695, + "TP": 8466, + "n_pred": 9581, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9502888149833713, + "FN": 1054, + "FP": 82, + "IoU": 0.9052859763214941, + "TN": 750054, + "TP": 10858, + "n_pred": 10940, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9381688466111772, + "FN": 1220, + "FP": 444, + "IoU": 0.883538633818589, + "TN": 1063984, + "TP": 12624, + "n_pred": 13068, + "n_ref": 13844 + }, + "2": { + "Dice": 0.862779437519316, + "FN": 1495, + "FP": 1169, + "IoU": 0.758673792916025, + "TN": 1067233, + "TP": 8375, + "n_pred": 9544, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9664219982471516, + "FN": 761, + "FP": 465, + "IoU": 0.9350257035348986, + "TN": 1059403, + "TP": 17643, + "n_pred": 18108, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.925048243921266, + "FN": 1312, + "FP": 630, + "IoU": 0.8605486141031164, + "TN": 1064346, + "TP": 11984, + "n_pred": 12614, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8426400898920319, + "FN": 2176, + "FP": 1045, + "IoU": 0.7280709159983115, + "TN": 1066427, + "TP": 8624, + "n_pred": 9669, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9469817315329627, + "FN": 919, + "FP": 683, + "IoU": 0.8993022817273242, + "TN": 1062363, + "TP": 14307, + "n_pred": 14990, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9102929442608002, + "FN": 1146, + "FP": 428, + "IoU": 0.8353556485355649, + "TN": 1096360, + "TP": 7986, + "n_pred": 8414, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8549872868992539, + "FN": 1226, + "FP": 2253, + "IoU": 0.7467054969057153, + "TN": 1092185, + "TP": 10256, + "n_pred": 12509, + "n_ref": 11482 + }, + "3": { + "Dice": 0.901696352841391, + "FN": 865, + "FP": 1453, + "IoU": 0.8209900378407599, + "TN": 1092971, + "TP": 10631, + "n_pred": 12084, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8816750527511767, + "FN": 336, + "FP": 393, + "IoU": 0.788388969521045, + "TN": 1102475, + "TP": 2716, + "n_pred": 3109, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8729843989674136, + "FN": 685, + "FP": 2710, + "IoU": 0.7745983269154163, + "TN": 1090858, + "TP": 11667, + "n_pred": 14377, + "n_ref": 12352 + }, + "3": { + "Dice": 0.8016899920781622, + "FN": 244, + "FP": 1258, + "IoU": 0.6690171881886293, + "TN": 1101382, + "TP": 3036, + "n_pred": 4294, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8769569617239121, + "FN": 1798, + "FP": 269, + "IoU": 0.7808756493162302, + "TN": 1137447, + "TP": 7366, + "n_pred": 7635, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9094591857403281, + "FN": 1456, + "FP": 2120, + "IoU": 0.8339524517087668, + "TN": 1125344, + "TP": 17960, + "n_pred": 20080, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9192340463697923, + "FN": 1681, + "FP": 120, + "IoU": 0.8505394190871369, + "TN": 1134830, + "TP": 10249, + "n_pred": 10369, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6799831791421362, + "FN": 849, + "FP": 673, + "IoU": 0.5151322077094617, + "TN": 1143741, + "TP": 1617, + "n_pred": 2290, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8460155781905333, + "FN": 4668, + "FP": 2528, + "IoU": 0.7331256490134995, + "TN": 1119916, + "TP": 19768, + "n_pred": 22296, + "n_ref": 24436 + }, + "3": { + "Dice": 0.5807590467784642, + "FN": 84, + "FP": 3716, + "IoU": 0.4092039800995025, + "TN": 1140448, + "TP": 2632, + "n_pred": 6348, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9555725450220863, + "FN": 597, + "FP": 449, + "IoU": 0.9149247661651078, + "TN": 788505, + "TP": 11249, + "n_pred": 11698, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8791744627771163, + "FN": 881, + "FP": 1250, + "IoU": 0.7843990287333064, + "TN": 790916, + "TP": 7753, + "n_pred": 9003, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9547607768829939, + "FN": 591, + "FP": 173, + "IoU": 0.9134375708135055, + "TN": 791974, + "TP": 8062, + "n_pred": 8235, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8021636551962251, + "FN": 454, + "FP": 1265, + "IoU": 0.6696771714066103, + "TN": 795596, + "TP": 3485, + "n_pred": 4750, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9101168883514712, + "FN": 1362, + "FP": 868, + "IoU": 0.8350591715976331, + "TN": 787280, + "TP": 11290, + "n_pred": 12158, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8994403934203833, + "FN": 194, + "FP": 399, + "IoU": 0.8172573189522342, + "TN": 797555, + "TP": 2652, + "n_pred": 3051, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9478243077342791, + "FN": 295, + "FP": 1235, + "IoU": 0.9008232319958515, + "TN": 1332413, + "TP": 13897, + "n_pred": 15132, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8896445707364793, + "FN": 1057, + "FP": 1312, + "IoU": 0.8012250377580131, + "TN": 1335922, + "TP": 9549, + "n_pred": 10861, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9736315377251762, + "FN": 546, + "FP": 363, + "IoU": 0.948617941326098, + "TN": 1330149, + "TP": 16782, + "n_pred": 17145, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7534209820230748, + "FN": 252, + "FP": 3424, + "IoU": 0.6043908738699957, + "TN": 1338548, + "TP": 5616, + "n_pred": 9040, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8696944673823287, + "FN": 1582, + "FP": 1574, + "IoU": 0.7694330800701344, + "TN": 1334152, + "TP": 10532, + "n_pred": 12106, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9540138925525367, + "FN": 768, + "FP": 278, + "IoU": 0.9120712844653666, + "TN": 1335944, + "TP": 10850, + "n_pred": 11128, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8461369139335241, + "FN": 930, + "FP": 3264, + "IoU": 0.7333078977489508, + "TN": 836242, + "TP": 11532, + "n_pred": 14796, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8610938471100062, + "FN": 1135, + "FP": 1547, + "IoU": 0.7560709413369714, + "TN": 840973, + "TP": 8313, + "n_pred": 9860, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9714989059080963, + "FN": 729, + "FP": 313, + "IoU": 0.9445774160948885, + "TN": 833167, + "TP": 17759, + "n_pred": 18072, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9125154534215694, + "FN": 664, + "FP": 539, + "IoU": 0.8391065935535643, + "TN": 844491, + "TP": 6274, + "n_pred": 6813, + "n_ref": 6938 + }, + "2": { + "Dice": 0.876212512236362, + "FN": 1446, + "FP": 1336, + "IoU": 0.7796959138422553, + "TN": 839340, + "TP": 9846, + "n_pred": 11182, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9568166581220175, + "FN": 865, + "FP": 230, + "IoU": 0.9172085286556783, + "TN": 838742, + "TP": 12131, + "n_pred": 12361, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7333001493280239, + "FN": 2173, + "FP": 506, + "IoU": 0.5789060044011317, + "TN": 845606, + "TP": 3683, + "n_pred": 4189, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8544943042936863, + "FN": 1456, + "FP": 1699, + "IoU": 0.7459537804976246, + "TN": 839549, + "TP": 9264, + "n_pred": 10963, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9356363043832492, + "FN": 1472, + "FP": 108, + "IoU": 0.8790569503980404, + "TN": 838904, + "TP": 11484, + "n_pred": 11592, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8698850574712643, + "FN": 212, + "FP": 354, + "IoU": 0.7697314890154597, + "TN": 849510, + "TP": 1892, + "n_pred": 2246, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8989667510955655, + "FN": 1406, + "FP": 1107, + "IoU": 0.81647557145987, + "TN": 838275, + "TP": 11180, + "n_pred": 12287, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9483486609983226, + "FN": 548, + "FP": 345, + "IoU": 0.901770982290177, + "TN": 842877, + "TP": 8198, + "n_pred": 8543, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9128778669260069, + "FN": 1824, + "FP": 326, + "IoU": 0.839719695840167, + "TN": 783626, + "TP": 11264, + "n_pred": 11590, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8191202872531418, + "FN": 1554, + "FP": 1670, + "IoU": 0.693652603572786, + "TN": 786516, + "TP": 7300, + "n_pred": 8970, + "n_ref": 8854 + }, + "3": { + "Dice": 0.942595161041763, + "FN": 1225, + "FP": 265, + "IoU": 0.8914231582015594, + "TN": 783317, + "TP": 12233, + "n_pred": 12498, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9036748329621381, + "FN": 1176, + "FP": 208, + "IoU": 0.824276282376841, + "TN": 789164, + "TP": 6492, + "n_pred": 6700, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8586131614512943, + "FN": 1363, + "FP": 1357, + "IoU": 0.7522543036706439, + "TN": 786061, + "TP": 8259, + "n_pred": 9616, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9388476896748431, + "FN": 803, + "FP": 269, + "IoU": 0.8847435759595742, + "TN": 787739, + "TP": 8229, + "n_pred": 8498, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8060495118549512, + "FN": 3221, + "FP": 1229, + "IoU": 0.6751113382492516, + "TN": 882973, + "TP": 9247, + "n_pred": 10476, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8773334619651729, + "FN": 1244, + "FP": 1299, + "IoU": 0.7814728882014265, + "TN": 885033, + "TP": 9094, + "n_pred": 10393, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9539037389641564, + "FN": 529, + "FP": 604, + "IoU": 0.9118699439950217, + "TN": 883814, + "TP": 11723, + "n_pred": 12327, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7765755348145701, + "FN": 1655, + "FP": 1050, + "IoU": 0.6347556035646773, + "TN": 889264, + "TP": 4701, + "n_pred": 5751, + "n_ref": 6356 + }, + "2": { + "Dice": 0.9007760048827274, + "FN": 1187, + "FP": 1089, + "IoU": 0.8194653763782026, + "TN": 884063, + "TP": 10331, + "n_pred": 11420, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9224071092026004, + "FN": 1093, + "FP": 208, + "IoU": 0.8559884879344698, + "TN": 887636, + "TP": 7733, + "n_pred": 7941, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9573979140887396, + "FN": 388, + "FP": 576, + "IoU": 0.9182773821634452, + "TN": 750252, + "TP": 10832, + "n_pred": 11408, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9211741916256891, + "FN": 1139, + "FP": 448, + "IoU": 0.8538674033149172, + "TN": 751188, + "TP": 9273, + "n_pred": 9721, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9753238479507327, + "FN": 270, + "FP": 311, + "IoU": 0.9518361933184116, + "TN": 749985, + "TP": 11482, + "n_pred": 11793, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8817177609532084, + "FN": 240, + "FP": 713, + "IoU": 0.7884572697003329, + "TN": 757543, + "TP": 3552, + "n_pred": 4265, + "n_ref": 3792 + }, + "2": { + "Dice": 0.9030571555161719, + "FN": 1441, + "FP": 747, + "IoU": 0.8232490508118588, + "TN": 749669, + "TP": 10191, + "n_pred": 10938, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9443984651267775, + "FN": 558, + "FP": 181, + "IoU": 0.8946543121881683, + "TN": 755033, + "TP": 6276, + "n_pred": 6457, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8433393314793609, + "FN": 209, + "FP": 2664, + "IoU": 0.7291155949462569, + "TN": 984722, + "TP": 7733, + "n_pred": 10397, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8759929390997352, + "FN": 808, + "FP": 1440, + "IoU": 0.779348252846486, + "TN": 985140, + "TP": 7940, + "n_pred": 9380, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9765804469107073, + "FN": 179, + "FP": 606, + "IoU": 0.9542327425373134, + "TN": 978176, + "TP": 16367, + "n_pred": 16973, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.709181141439206, + "FN": 384, + "FP": 1960, + "IoU": 0.5494040753556324, + "TN": 990126, + "TP": 2858, + "n_pred": 4818, + "n_ref": 3242 + }, + "2": { + "Dice": 0.864076601364737, + "FN": 483, + "FP": 1987, + "IoU": 0.7606821044472435, + "TN": 985007, + "TP": 7851, + "n_pred": 9838, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9366476624857468, + "FN": 346, + "FP": 1043, + "IoU": 0.8808441279917646, + "TN": 983671, + "TP": 10268, + "n_pred": 11311, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9383622687248226, + "FN": 1163, + "FP": 566, + "IoU": 0.8838817998656817, + "TN": 743126, + "TP": 13161, + "n_pred": 13727, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8987443842875245, + "FN": 1010, + "FP": 748, + "IoU": 0.8161087866108787, + "TN": 748456, + "TP": 7802, + "n_pred": 8550, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9772001225329308, + "FN": 137, + "FP": 384, + "IoU": 0.9554167379770666, + "TN": 746330, + "TP": 11165, + "n_pred": 11549, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8280701754385965, + "FN": 752, + "FP": 1110, + "IoU": 0.7065868263473054, + "TN": 751670, + "TP": 4484, + "n_pred": 5594, + "n_ref": 5236 + }, + "2": { + "Dice": 0.9172457359444094, + "FN": 620, + "FP": 952, + "IoU": 0.8471411901983664, + "TN": 747732, + "TP": 8712, + "n_pred": 9664, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9221351616062684, + "FN": 426, + "FP": 210, + "IoU": 0.8555202180826896, + "TN": 753614, + "TP": 3766, + "n_pred": 3976, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9550942190993292, + "FN": 470, + "FP": 233, + "IoU": 0.9140481721481843, + "TN": 630797, + "TP": 7476, + "n_pred": 7709, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8841502815471245, + "FN": 577, + "FP": 678, + "IoU": 0.7923560555923229, + "TN": 632932, + "TP": 4789, + "n_pred": 5467, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9566312255176274, + "FN": 496, + "FP": 124, + "IoU": 0.9168677929739877, + "TN": 631518, + "TP": 6838, + "n_pred": 6962, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7348367029548989, + "FN": 185, + "FP": 1861, + "IoU": 0.5808236017209588, + "TN": 634095, + "TP": 2835, + "n_pred": 4696, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9352759500469988, + "FN": 387, + "FP": 577, + "IoU": 0.8784209862529954, + "TN": 631047, + "TP": 6965, + "n_pred": 7542, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9306495882891125, + "FN": 213, + "FP": 166, + "IoU": 0.8702943189596167, + "TN": 636054, + "TP": 2543, + "n_pred": 2709, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9534237512404896, + "FN": 1029, + "FP": 379, + "IoU": 0.9109931095518048, + "TN": 967221, + "TP": 14411, + "n_pred": 14790, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8959563834620627, + "FN": 1022, + "FP": 1039, + "IoU": 0.811522633744856, + "TN": 972105, + "TP": 8874, + "n_pred": 9913, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9730933382816849, + "FN": 108, + "FP": 617, + "IoU": 0.9475966750993856, + "TN": 969205, + "TP": 13110, + "n_pred": 13727, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9239822652156389, + "FN": 457, + "FP": 486, + "IoU": 0.8587054240335631, + "TN": 976366, + "TP": 5731, + "n_pred": 6217, + "n_ref": 6188 + }, + "2": { + "Dice": 0.923138510808647, + "FN": 732, + "FP": 804, + "IoU": 0.8572490706319703, + "TN": 972280, + "TP": 9224, + "n_pred": 10028, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9442568958419103, + "FN": 256, + "FP": 421, + "IoU": 0.8944002495710498, + "TN": 976629, + "TP": 5734, + "n_pred": 6155, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9526906977444515, + "FN": 362, + "FP": 1209, + "IoU": 0.9096555293576399, + "TN": 1031187, + "TP": 15818, + "n_pred": 17027, + "n_ref": 16180 + }, + "2": { + "Dice": 0.9009365365598279, + "FN": 964, + "FP": 739, + "IoU": 0.8197311315761617, + "TN": 1039129, + "TP": 7744, + "n_pred": 8483, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9723310479921645, + "FN": 347, + "FP": 331, + "IoU": 0.9461520133428639, + "TN": 1035985, + "TP": 11913, + "n_pred": 12244, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.872327428222358, + "FN": 432, + "FP": 1031, + "IoU": 0.7735644637053087, + "TN": 1042115, + "TP": 4998, + "n_pred": 6029, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8681915582797628, + "FN": 1611, + "FP": 1034, + "IoU": 0.7670834800986263, + "TN": 1037220, + "TP": 8711, + "n_pred": 9745, + "n_ref": 10322 + }, + "3": { + "Dice": 0.932723839809202, + "FN": 387, + "FP": 290, + "IoU": 0.873929236499069, + "TN": 1043206, + "TP": 4693, + "n_pred": 4983, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9139110335393179, + "FN": 1475, + "FP": 350, + "IoU": 0.8414697706740792, + "TN": 477704, + "TP": 9687, + "n_pred": 10037, + "n_ref": 11162 + }, + "2": { + "Dice": 0.8224525043177893, + "FN": 336, + "FP": 692, + "IoU": 0.69844529187445, + "TN": 485807, + "TP": 2381, + "n_pred": 3073, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9660288110083853, + "FN": 158, + "FP": 158, + "IoU": 0.934289873154502, + "TN": 484407, + "TP": 4493, + "n_pred": 4651, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.860298266827892, + "FN": 1315, + "FP": 418, + "IoU": 0.7548450983165936, + "TN": 482147, + "TP": 5336, + "n_pred": 5754, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8573214564775746, + "FN": 617, + "FP": 296, + "IoU": 0.75027352297593, + "TN": 485560, + "TP": 2743, + "n_pred": 3039, + "n_ref": 3360 + }, + "3": { + "Dice": 0.883768561187916, + "FN": 64, + "FP": 390, + "IoU": 0.791743119266055, + "TN": 487036, + "TP": 1726, + "n_pred": 2116, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9241006847333397, + "FN": 1503, + "FP": 858, + "IoU": 0.8589100035855145, + "TN": 463746, + "TP": 14373, + "n_pred": 15231, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8334954078876283, + "FN": 662, + "FP": 879, + "IoU": 0.7145238977399037, + "TN": 475082, + "TP": 3857, + "n_pred": 4736, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9568990454150998, + "FN": 344, + "FP": 252, + "IoU": 0.9173599556295063, + "TN": 473268, + "TP": 6616, + "n_pred": 6868, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9198012775017743, + "FN": 1243, + "FP": 565, + "IoU": 0.8515111695137977, + "TN": 468304, + "TP": 10368, + "n_pred": 10933, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8483066122758751, + "FN": 1191, + "FP": 408, + "IoU": 0.7365733113673806, + "TN": 474410, + "TP": 4471, + "n_pred": 4879, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8969396195202647, + "FN": 95, + "FP": 528, + "IoU": 0.8131373725254949, + "TN": 477146, + "TP": 2711, + "n_pred": 3239, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8947868298860279, + "FN": 3714, + "FP": 274, + "IoU": 0.8096056526305738, + "TN": 623694, + "TP": 16958, + "n_pred": 17232, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8294039145907474, + "FN": 1608, + "FP": 1460, + "IoU": 0.7085312559376782, + "TN": 634114, + "TP": 7458, + "n_pred": 8918, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9601359589167621, + "FN": 1004, + "FP": 75, + "IoU": 0.9233283592695232, + "TN": 630567, + "TP": 12994, + "n_pred": 13069, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8053895634301375, + "FN": 4752, + "FP": 361, + "IoU": 0.6741859427770344, + "TN": 628947, + "TP": 10580, + "n_pred": 10941, + "n_ref": 15332 + }, + "2": { + "Dice": 0.868690403289301, + "FN": 2236, + "FP": 766, + "IoU": 0.767862666254253, + "TN": 631708, + "TP": 9930, + "n_pred": 10696, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9375710940113751, + "FN": 556, + "FP": 377, + "IoU": 0.8824789016248897, + "TN": 636701, + "TP": 7006, + "n_pred": 7383, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.904125692325082, + "FN": 2055, + "FP": 2186, + "IoU": 0.8250268173941744, + "TN": 540242, + "TP": 19997, + "n_pred": 22183, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7886472025125043, + "FN": 1079, + "FP": 738, + "IoU": 0.6510466679469944, + "TN": 559273, + "TP": 3390, + "n_pred": 4128, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9627187420745625, + "FN": 305, + "FP": 283, + "IoU": 0.928117359413203, + "TN": 556300, + "TP": 7592, + "n_pred": 7875, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7347777362719462, + "FN": 564, + "FP": 5116, + "IoU": 0.5807499261883673, + "TN": 550932, + "TP": 7868, + "n_pred": 12984, + "n_ref": 8432 + }, + "2": { + "Dice": 0.853781512605042, + "FN": 799, + "FP": 593, + "IoU": 0.7448680351906158, + "TN": 559024, + "TP": 4064, + "n_pred": 4657, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8957352347638907, + "FN": 123, + "FP": 652, + "IoU": 0.8111598440545809, + "TN": 560376, + "TP": 3329, + "n_pred": 3981, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9261178276722318, + "FN": 336, + "FP": 819, + "IoU": 0.8624017155110794, + "TN": 410486, + "TP": 7239, + "n_pred": 8058, + "n_ref": 7575 + }, + "2": { + "Dice": 0.6637744034707158, + "FN": 1173, + "FP": 532, + "IoU": 0.4967532467532468, + "TN": 415492, + "TP": 1683, + "n_pred": 2215, + "n_ref": 2856 + }, + "3": { + "Dice": 0.901216971823265, + "FN": 89, + "FP": 812, + "IoU": 0.8201955697465576, + "TN": 413869, + "TP": 4110, + "n_pred": 4922, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7756434166355838, + "FN": 578, + "FP": 1828, + "IoU": 0.6335110434120335, + "TN": 412315, + "TP": 4159, + "n_pred": 5987, + "n_ref": 4737 + }, + "2": { + "Dice": 0.6257369384021142, + "FN": 1454, + "FP": 387, + "IoU": 0.45532544378698225, + "TN": 415500, + "TP": 1539, + "n_pred": 1926, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8483747223904704, + "FN": 282, + "FP": 469, + "IoU": 0.7366760168302945, + "TN": 416028, + "TP": 2101, + "n_pred": 2570, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9488589984739326, + "FN": 198, + "FP": 1243, + "IoU": 0.9026943075156999, + "TN": 481701, + "TP": 13368, + "n_pred": 14611, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8948826167238195, + "FN": 887, + "FP": 707, + "IoU": 0.8097625014918248, + "TN": 488131, + "TP": 6785, + "n_pred": 7492, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9587602783048703, + "FN": 193, + "FP": 459, + "IoU": 0.9207872676467015, + "TN": 488279, + "TP": 7579, + "n_pred": 8038, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9390813253012048, + "FN": 791, + "FP": 827, + "IoU": 0.8851586343956278, + "TN": 482421, + "TP": 12471, + "n_pred": 13298, + "n_ref": 13262 + }, + "2": { + "Dice": 0.9046427917759746, + "FN": 1062, + "FP": 501, + "IoU": 0.8258883814191823, + "TN": 487533, + "TP": 7414, + "n_pred": 7915, + "n_ref": 8476 + }, + "3": { + "Dice": 0.9182868413637645, + "FN": 141, + "FP": 439, + "IoU": 0.8489189893201354, + "TN": 492671, + "TP": 3259, + "n_pred": 3698, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_002/summary_cross_val.json b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_002/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..e46513dbaa556c0f45675f31c5455c5af07d66f6 --- /dev/null +++ b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_002/summary_cross_val.json @@ -0,0 +1,4956 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8561787557773911, + "FN": 256.2564102564102, + "FP": 194.5, + "IoU": 0.7764812889676836, + "TN": 13444.102564102563, + "TP": 1858.9871794871797, + "n_pred": 2053.487179487179, + "n_ref": 2115.24358974359 + }, + "mean": { + "1": { + "Dice": 0.8015255442731494, + "FN": 408.7307692307692, + "FP": 155.76923076923077, + "IoU": 0.7246371428254464, + "TN": 12686.73076923077, + "TP": 2502.6153846153848, + "n_pred": 2658.3846153846152, + "n_ref": 2911.346153846154 + }, + "2": { + "Dice": 0.8689641960792305, + "FN": 275.65384615384613, + "FP": 184.03846153846155, + "IoU": 0.7738270531484147, + "TN": 13846.307692307691, + "TP": 1447.8461538461538, + "n_pred": 1631.8846153846155, + "n_ref": 1723.5 + }, + "3": { + "Dice": 0.8980465269797933, + "FN": 84.38461538461539, + "FP": 243.69230769230768, + "IoU": 0.8309796709291899, + "TN": 13799.26923076923, + "TP": 1626.5, + "n_pred": 1870.1923076923076, + "n_ref": 1710.8846153846155 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6875, + "FN": 5, + "FP": 5, + "IoU": 0.5238095238095238, + "TN": 6379, + "TP": 11, + "n_pred": 16, + "n_ref": 16 + }, + "2": { + "Dice": 0.8369622942113648, + "FN": 84, + "FP": 223, + "IoU": 0.719634703196347, + "TN": 5305, + "TP": 788, + "n_pred": 1011, + "n_ref": 872 + }, + "3": { + "Dice": 0.9593023255813954, + "FN": 195, + "FP": 1, + "IoU": 0.9217877094972067, + "TN": 3894, + "TP": 2310, + "n_pred": 2311, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6157941437444543, + "FN": 3722, + "FP": 608, + "IoU": 0.44487179487179485, + "TN": 43400, + "TP": 3470, + "n_pred": 4078, + "n_ref": 7192 + }, + "2": { + "Dice": 0.770710696338837, + "FN": 547, + "FP": 1050, + "IoU": 0.6269563186171455, + "TN": 46919, + "TP": 2684, + "n_pred": 3734, + "n_ref": 3231 + }, + "3": { + "Dice": 0.856605640771895, + "FN": 189, + "FP": 2709, + "IoU": 0.7491777739311061, + "TN": 39646, + "TP": 8656, + "n_pred": 11365, + "n_ref": 8845 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.694199535962877, + "FN": 1974, + "FP": 3, + "IoU": 0.5316275764036958, + "TN": 8579, + "TP": 2244, + "n_pred": 2247, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8940609951845907, + "FN": 9, + "FP": 123, + "IoU": 0.8084179970972424, + "TN": 12111, + "TP": 557, + "n_pred": 680, + "n_ref": 566 + }, + "3": { + "Dice": 0.9326424870466321, + "FN": 62, + "FP": 3, + "IoU": 0.8737864077669902, + "TN": 12285, + "TP": 450, + "n_pred": 453, + "n_ref": 512 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9441913439635535, + "FN": 44, + "FP": 152, + "IoU": 0.8942826321467098, + "TN": 4546, + "TP": 1658, + "n_pred": 1810, + "n_ref": 1702 + }, + "2": { + "Dice": 0.8906497622820919, + "FN": 66, + "FP": 72, + "IoU": 0.8028571428571428, + "TN": 5700, + "TP": 562, + "n_pred": 634, + "n_ref": 628 + }, + "3": { + "Dice": 0.9732888146911519, + "FN": 4, + "FP": 60, + "IoU": 0.9479674796747968, + "TN": 5170, + "TP": 1166, + "n_pred": 1226, + "n_ref": 1170 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5928636779505947, + "FN": 678, + "FP": 212, + "IoU": 0.4213263979193758, + "TN": 30462, + "TP": 648, + "n_pred": 860, + "n_ref": 1326 + }, + "2": { + "Dice": 0.762962962962963, + "FN": 13, + "FP": 435, + "IoU": 0.6167664670658682, + "TN": 30831, + "TP": 721, + "n_pred": 1156, + "n_ref": 734 + }, + "3": { + "Dice": 0.9294403892944039, + "FN": 25, + "FP": 4, + "IoU": 0.8681818181818182, + "TN": 31780, + "TP": 191, + "n_pred": 195, + "n_ref": 216 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9469049469049469, + "FN": 108, + "FP": 97, + "IoU": 0.8991637973438269, + "TN": 10767, + "TP": 1828, + "n_pred": 1925, + "n_ref": 1936 + }, + "2": { + "Dice": 0.8905109489051095, + "FN": 133, + "FP": 92, + "IoU": 0.8026315789473685, + "TN": 11660, + "TP": 915, + "n_pred": 1007, + "n_ref": 1048 + }, + "3": { + "Dice": 0.971830985915493, + "FN": 29, + "FP": 87, + "IoU": 0.9452054794520548, + "TN": 10683, + "TP": 2001, + "n_pred": 2088, + "n_ref": 2030 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.936085079498789, + "FN": 438, + "FP": 169, + "IoU": 0.8798495645288994, + "TN": 7748, + "TP": 4445, + "n_pred": 4614, + "n_ref": 4883 + }, + "2": { + "Dice": 0.8796326664480157, + "FN": 198, + "FP": 169, + "IoU": 0.7851288056206089, + "TN": 11092, + "TP": 1341, + "n_pred": 1510, + "n_ref": 1539 + }, + "3": { + "Dice": 0.9756856642676522, + "FN": 68, + "FP": 57, + "IoU": 0.9525256361564755, + "TN": 10167, + "TP": 2508, + "n_pred": 2565, + "n_ref": 2576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9870706543032519, + "FN": 45, + "FP": 54, + "IoU": 0.9744713769984528, + "TN": 8922, + "TP": 3779, + "n_pred": 3833, + "n_ref": 3824 + }, + "2": { + "Dice": 0.9189636163175303, + "FN": 210, + "FP": 84, + "IoU": 0.8500764915859256, + "TN": 10839, + "TP": 1667, + "n_pred": 1751, + "n_ref": 1877 + }, + "3": { + "Dice": 0.9815858699736941, + "FN": 8, + "FP": 139, + "IoU": 0.9638376383763838, + "TN": 8735, + "TP": 3918, + "n_pred": 4057, + "n_ref": 3926 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8277270870216533, + "FN": 195, + "FP": 1070, + "IoU": 0.7060873605947955, + "TN": 8496, + "TP": 3039, + "n_pred": 4109, + "n_ref": 3234 + }, + "2": { + "Dice": 0.8820581356498497, + "FN": 456, + "FP": 250, + "IoU": 0.7890017931858936, + "TN": 9454, + "TP": 2640, + "n_pred": 2890, + "n_ref": 3096 + }, + "3": { + "Dice": 0.6525220176140912, + "FN": 809, + "FP": 59, + "IoU": 0.48425430778371953, + "TN": 11117, + "TP": 815, + "n_pred": 874, + "n_ref": 1624 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.707641196013289, + "FN": 417, + "FP": 111, + "IoU": 0.5475578406169666, + "TN": 30833, + "TP": 639, + "n_pred": 750, + "n_ref": 1056 + }, + "2": { + "Dice": 0.8199797892305472, + "FN": 3012, + "FP": 729, + "IoU": 0.6948862246146318, + "TN": 19739, + "TP": 8520, + "n_pred": 9249, + "n_ref": 11532 + }, + "3": { + "Dice": 0.702276707530648, + "FN": 148, + "FP": 1892, + "IoU": 0.5411605937921727, + "TN": 27554, + "TP": 2406, + "n_pred": 4298, + "n_ref": 2554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9173422228956739, + "FN": 918, + "FP": 173, + "IoU": 0.8473058082575228, + "TN": 5655, + "TP": 6054, + "n_pred": 6227, + "n_ref": 6972 + }, + "2": { + "Dice": 0.9329725228975854, + "FN": 85, + "FP": 237, + "IoU": 0.8743659773702692, + "TN": 10237, + "TP": 2241, + "n_pred": 2478, + "n_ref": 2326 + }, + "3": { + "Dice": 0.975422917331631, + "FN": 52, + "FP": 25, + "IoU": 0.9520249221183801, + "TN": 11195, + "TP": 1528, + "n_pred": 1553, + "n_ref": 1580 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2465753424657534, + "FN": 104, + "FP": 6, + "IoU": 0.140625, + "TN": 38272, + "TP": 18, + "n_pred": 24, + "n_ref": 122 + }, + "2": { + "Dice": 0.918925702811245, + "FN": 489, + "FP": 157, + "IoU": 0.8500116090085906, + "TN": 34093, + "TP": 3661, + "n_pred": 3818, + "n_ref": 4150 + }, + "3": { + "Dice": 0.8556375131717597, + "FN": 118, + "FP": 19, + "IoU": 0.7476979742173112, + "TN": 37857, + "TP": 406, + "n_pred": 425, + "n_ref": 524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9502262443438914, + "FN": 72, + "FP": 126, + "IoU": 0.9051724137931034, + "TN": 10712, + "TP": 1890, + "n_pred": 2016, + "n_ref": 1962 + }, + "2": { + "Dice": 0.9257694628847315, + "FN": 337, + "FP": 32, + "IoU": 0.8617977528089887, + "TN": 10130, + "TP": 2301, + "n_pred": 2333, + "n_ref": 2638 + }, + "3": { + "Dice": 0.966952264381885, + "FN": 9, + "FP": 72, + "IoU": 0.9360189573459715, + "TN": 11534, + "TP": 1185, + "n_pred": 1257, + "n_ref": 1194 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9319852941176471, + "FN": 16, + "FP": 132, + "IoU": 0.8726333907056799, + "TN": 24438, + "TP": 1014, + "n_pred": 1146, + "n_ref": 1030 + }, + "2": { + "Dice": 0.8526626300263934, + "FN": 658, + "FP": 291, + "IoU": 0.7431664411366712, + "TN": 21905, + "TP": 2746, + "n_pred": 3037, + "n_ref": 3404 + }, + "3": { + "Dice": 0.9646384679182689, + "FN": 163, + "FP": 306, + "IoU": 0.9316923973201282, + "TN": 18734, + "TP": 6397, + "n_pred": 6703, + "n_ref": 6560 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8403266685440721, + "FN": 36, + "FP": 531, + "IoU": 0.7246236036911122, + "TN": 10741, + "TP": 1492, + "n_pred": 2023, + "n_ref": 1528 + }, + "2": { + "Dice": 0.8062764031382016, + "FN": 44, + "FP": 277, + "IoU": 0.6754297269969667, + "TN": 11811, + "TP": 668, + "n_pred": 945, + "n_ref": 712 + }, + "3": { + "Dice": 0.6928104575163399, + "FN": 23, + "FP": 588, + "IoU": 0.53, + "TN": 11500, + "TP": 689, + "n_pred": 1277, + "n_ref": 712 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 77, + "IoU": 0.0, + "TN": 6323, + "TP": 0, + "n_pred": 77, + "n_ref": 0 + }, + "2": { + "Dice": 0.694468085106383, + "FN": 336, + "FP": 23, + "IoU": 0.5319426336375489, + "TN": 5633, + "TP": 408, + "n_pred": 431, + "n_ref": 744 + }, + "3": { + "Dice": 0.9528643944887599, + "FN": 96, + "FP": 34, + "IoU": 0.909972299168975, + "TN": 4956, + "TP": 1314, + "n_pred": 1348, + "n_ref": 1410 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9793396408573084, + "FN": 76, + "FP": 31, + "IoU": 0.9595157018539539, + "TN": 3757, + "TP": 2536, + "n_pred": 2567, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9380846325167038, + "FN": 11, + "FP": 128, + "IoU": 0.8833892617449665, + "TN": 5208, + "TP": 1053, + "n_pred": 1181, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9871216999356085, + "FN": 33, + "FP": 7, + "IoU": 0.9745708836617928, + "TN": 4827, + "TP": 1533, + "n_pred": 1540, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.976882039122703, + "FN": 176, + "FP": 97, + "IoU": 0.9548088064889919, + "TN": 6759, + "TP": 5768, + "n_pred": 5865, + "n_ref": 5944 + }, + "2": { + "Dice": 0.8750425604358189, + "FN": 186, + "FP": 181, + "IoU": 0.7778450363196125, + "TN": 11148, + "TP": 1285, + "n_pred": 1466, + "n_ref": 1471 + }, + "3": { + "Dice": 0.9580064605445316, + "FN": 16, + "FP": 166, + "IoU": 0.9193976970770593, + "TN": 10542, + "TP": 2076, + "n_pred": 2242, + "n_ref": 2092 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9428488540760082, + "FN": 562, + "FP": 29, + "IoU": 0.8918770581778266, + "TN": 7334, + "TP": 4875, + "n_pred": 4904, + "n_ref": 5437 + }, + "2": { + "Dice": 0.9353023909985936, + "FN": 118, + "FP": 66, + "IoU": 0.8784676354029062, + "TN": 11286, + "TP": 1330, + "n_pred": 1396, + "n_ref": 1448 + }, + "3": { + "Dice": 0.9792632349353501, + "FN": 6, + "FP": 79, + "IoU": 0.9593690248565966, + "TN": 10708, + "TP": 2007, + "n_pred": 2086, + "n_ref": 2013 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.952395546021044, + "FN": 827, + "FP": 105, + "IoU": 0.9091175036567528, + "TN": 8945, + "TP": 9323, + "n_pred": 9428, + "n_ref": 10150 + }, + "2": { + "Dice": 0.8516439454691259, + "FN": 92, + "FP": 93, + "IoU": 0.7416201117318436, + "TN": 18484, + "TP": 531, + "n_pred": 624, + "n_ref": 623 + }, + "3": { + "Dice": 0.7575757575757576, + "FN": 6, + "FP": 10, + "IoU": 0.6097560975609756, + "TN": 19159, + "TP": 25, + "n_pred": 35, + "n_ref": 31 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9744867279443347, + "FN": 201, + "FP": 96, + "IoU": 0.9502429217624393, + "TN": 6831, + "TP": 5672, + "n_pred": 5768, + "n_ref": 5873 + }, + "2": { + "Dice": 0.8734321550741163, + "FN": 61, + "FP": 50, + "IoU": 0.7753036437246964, + "TN": 12306, + "TP": 383, + "n_pred": 433, + "n_ref": 444 + }, + "3": { + "Dice": 0.7509293680297398, + "FN": 125, + "FP": 9, + "IoU": 0.6011904761904762, + "TN": 12464, + "TP": 202, + "n_pred": 211, + "n_ref": 327 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9811757282574404, + "FN": 13, + "FP": 166, + "IoU": 0.963047068538398, + "TN": 1556, + "TP": 4665, + "n_pred": 4831, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9661399548532731, + "FN": 22, + "FP": 23, + "IoU": 0.9344978165938864, + "TN": 5713, + "TP": 642, + "n_pred": 665, + "n_ref": 664 + }, + "3": { + "Dice": 0.9806201550387597, + "FN": 10, + "FP": 10, + "IoU": 0.9619771863117871, + "TN": 5874, + "TP": 506, + "n_pred": 516, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8918990156459444, + "FN": 120.15384615384615, + "FP": 110.65384615384613, + "IoU": 0.8246345348693209, + "TN": 12893.948717948719, + "TP": 1398.3205128205127, + "n_pred": 1508.9743589743591, + "n_ref": 1518.4743589743591 + }, + "mean": { + "1": { + "Dice": 0.8828913687885054, + "FN": 137.73076923076923, + "FP": 147.07692307692307, + "IoU": 0.8309222063570019, + "TN": 12261.576923076924, + "TP": 1976.6923076923076, + "n_pred": 2123.769230769231, + "n_ref": 2114.423076923077 + }, + "2": { + "Dice": 0.8750823221150457, + "FN": 138.07692307692307, + "FP": 142.69230769230768, + "IoU": 0.7844779127734697, + "TN": 13304.961538461539, + "TP": 937.3461538461538, + "n_pred": 1080.0384615384614, + "n_ref": 1075.423076923077 + }, + "3": { + "Dice": 0.917723356034282, + "FN": 84.65384615384616, + "FP": 42.19230769230769, + "IoU": 0.8585034854774916, + "TN": 13115.307692307691, + "TP": 1280.923076923077, + "n_pred": 1323.1153846153845, + "n_ref": 1365.576923076923 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9558317905316054, + "FN": 107, + "FP": 60, + "IoU": 0.9154002026342452, + "TN": 10826, + "TP": 1807, + "n_pred": 1867, + "n_ref": 1914 + }, + "2": { + "Dice": 0.9040590405904059, + "FN": 50, + "FP": 54, + "IoU": 0.8249158249158249, + "TN": 12206, + "TP": 490, + "n_pred": 544, + "n_ref": 540 + }, + "3": { + "Dice": 0.9780324737344794, + "FN": 36, + "FP": 10, + "IoU": 0.9570093457943926, + "TN": 11730, + "TP": 1024, + "n_pred": 1034, + "n_ref": 1060 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8764018961729679, + "FN": 448, + "FP": 621, + "IoU": 0.7799958839267339, + "TN": 27141, + "TP": 3790, + "n_pred": 4411, + "n_ref": 4238 + }, + "2": { + "Dice": 0.8047589993898718, + "FN": 469, + "FP": 171, + "IoU": 0.6733027054619704, + "TN": 30041, + "TP": 1319, + "n_pred": 1490, + "n_ref": 1788 + }, + "3": { + "Dice": 0.9677554438860971, + "FN": 143, + "FP": 11, + "IoU": 0.937525354969574, + "TN": 29535, + "TP": 2311, + "n_pred": 2322, + "n_ref": 2454 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9476951730560298, + "FN": 27, + "FP": 310, + "IoU": 0.9005899705014749, + "TN": 9410, + "TP": 3053, + "n_pred": 3363, + "n_ref": 3080 + }, + "2": { + "Dice": 0.8961328204089897, + "FN": 453, + "FP": 60, + "IoU": 0.8118121790168745, + "TN": 10074, + "TP": 2213, + "n_pred": 2273, + "n_ref": 2666 + }, + "3": { + "Dice": 0.9733106189664963, + "FN": 36, + "FP": 58, + "IoU": 0.9480088495575221, + "TN": 10992, + "TP": 1714, + "n_pred": 1772, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9519250780437045, + "FN": 521, + "FP": 172, + "IoU": 0.9082605242255759, + "TN": 30846, + "TP": 6861, + "n_pred": 7033, + "n_ref": 7382 + }, + "2": { + "Dice": 0.8634207240948814, + "FN": 555, + "FP": 1086, + "IoU": 0.7596660808435852, + "TN": 31572, + "TP": 5187, + "n_pred": 6273, + "n_ref": 5742 + }, + "3": { + "Dice": 0.973640372366487, + "FN": 736, + "FP": 71, + "IoU": 0.9486347145312202, + "TN": 22689, + "TP": 14904, + "n_pred": 14975, + "n_ref": 15640 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9445174861951091, + "FN": 38, + "FP": 173, + "IoU": 0.8948679621325362, + "TN": 23593, + "TP": 1796, + "n_pred": 1969, + "n_ref": 1834 + }, + "2": { + "Dice": 0.8961996596710153, + "FN": 255, + "FP": 294, + "IoU": 0.8119218910585817, + "TN": 22681, + "TP": 2370, + "n_pred": 2664, + "n_ref": 2625 + }, + "3": { + "Dice": 0.9723218127061523, + "FN": 101, + "FP": 92, + "IoU": 0.9461345241417807, + "TN": 22017, + "TP": 3390, + "n_pred": 3482, + "n_ref": 3491 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9810079575596817, + "FN": 43, + "FP": 136, + "IoU": 0.9627238650562265, + "TN": 1598, + "TP": 4623, + "n_pred": 4759, + "n_ref": 4666 + }, + "2": { + "Dice": 0.9216683621566633, + "FN": 31, + "FP": 46, + "IoU": 0.8547169811320755, + "TN": 5870, + "TP": 453, + "n_pred": 499, + "n_ref": 484 + }, + "3": { + "Dice": 0.9891808346213292, + "FN": 6, + "FP": 8, + "IoU": 0.9785932721712538, + "TN": 5746, + "TP": 640, + "n_pred": 648, + "n_ref": 646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8486956521739131, + "FN": 582, + "FP": 27, + "IoU": 0.7371601208459214, + "TN": 16883, + "TP": 1708, + "n_pred": 1735, + "n_ref": 2290 + }, + "2": { + "Dice": 0.9282485875706215, + "FN": 93, + "FP": 161, + "IoU": 0.8661043753294676, + "TN": 17303, + "TP": 1643, + "n_pred": 1804, + "n_ref": 1736 + }, + "3": { + "Dice": 0.9793014230271668, + "FN": 16, + "FP": 48, + "IoU": 0.9594423320659062, + "TN": 17622, + "TP": 1514, + "n_pred": 1562, + "n_ref": 1530 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9609214315096668, + "FN": 38, + "FP": 57, + "IoU": 0.9247822644497229, + "TN": 11537, + "TP": 1168, + "n_pred": 1225, + "n_ref": 1206 + }, + "2": { + "Dice": 0.8984198645598194, + "FN": 106, + "FP": 74, + "IoU": 0.8155737704918032, + "TN": 11824, + "TP": 796, + "n_pred": 870, + "n_ref": 902 + }, + "3": { + "Dice": 0.9247148288973384, + "FN": 76, + "FP": 23, + "IoU": 0.85997171145686, + "TN": 12093, + "TP": 608, + "n_pred": 631, + "n_ref": 684 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9157392686804452, + "FN": 77, + "FP": 29, + "IoU": 0.844574780058651, + "TN": 18518, + "TP": 576, + "n_pred": 605, + "n_ref": 653 + }, + "2": { + "Dice": 0.9131058849508668, + "FN": 310, + "FP": 477, + "IoU": 0.8401056481105241, + "TN": 14278, + "TP": 4135, + "n_pred": 4612, + "n_ref": 4445 + }, + "3": { + "Dice": 0.8074074074074075, + "FN": 150, + "FP": 162, + "IoU": 0.6770186335403726, + "TN": 18234, + "TP": 654, + "n_pred": 816, + "n_ref": 804 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9369292843491187, + "FN": 50, + "FP": 247, + "IoU": 0.8813423891330403, + "TN": 3897, + "TP": 2206, + "n_pred": 2453, + "n_ref": 2256 + }, + "2": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 6386, + "TP": 14, + "n_pred": 14, + "n_ref": 14 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 732, + "IoU": 0.0, + "TN": 24868, + "TP": 0, + "n_pred": 732, + "n_ref": 0 + }, + "2": { + "Dice": 0.8601583113456465, + "FN": 71, + "FP": 88, + "IoU": 0.7546296296296297, + "TN": 24952, + "TP": 489, + "n_pred": 577, + "n_ref": 560 + }, + "3": { + "Dice": 0.9714041826717883, + "FN": 46, + "FP": 21, + "IoU": 0.9443983402489626, + "TN": 24395, + "TP": 1138, + "n_pred": 1159, + "n_ref": 1184 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9756680425809254, + "FN": 81, + "FP": 143, + "IoU": 0.9524920466595971, + "TN": 8085, + "TP": 4491, + "n_pred": 4634, + "n_ref": 4572 + }, + "2": { + "Dice": 0.8186779866585809, + "FN": 75, + "FP": 224, + "IoU": 0.6930184804928131, + "TN": 11826, + "TP": 675, + "n_pred": 899, + "n_ref": 750 + }, + "3": { + "Dice": 0.9420505200594353, + "FN": 60, + "FP": 18, + "IoU": 0.8904494382022472, + "TN": 12088, + "TP": 634, + "n_pred": 652, + "n_ref": 694 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.93935790725327, + "FN": 44, + "FP": 160, + "IoU": 0.8856502242152466, + "TN": 11016, + "TP": 1580, + "n_pred": 1740, + "n_ref": 1624 + }, + "2": { + "Dice": 0.9258241758241759, + "FN": 88, + "FP": 20, + "IoU": 0.8618925831202046, + "TN": 12018, + "TP": 674, + "n_pred": 694, + "n_ref": 762 + }, + "3": { + "Dice": 0.9678407350689127, + "FN": 12, + "FP": 30, + "IoU": 0.9376854599406528, + "TN": 12126, + "TP": 632, + "n_pred": 662, + "n_ref": 644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.950320344501628, + "FN": 456, + "FP": 17, + "IoU": 0.9053432059235541, + "TN": 1403, + "TP": 4524, + "n_pred": 4541, + "n_ref": 4980 + }, + "2": { + "Dice": 0.9372093023255814, + "FN": 15, + "FP": 39, + "IoU": 0.8818380743982495, + "TN": 5943, + "TP": 403, + "n_pred": 442, + "n_ref": 418 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9483115093039284, + "FN": 170, + "FP": 205, + "IoU": 0.9017038007863696, + "TN": 15385, + "TP": 3440, + "n_pred": 3645, + "n_ref": 3610 + }, + "2": { + "Dice": 0.8123021257349615, + "FN": 556, + "FP": 274, + "IoU": 0.683929931454684, + "TN": 16574, + "TP": 1796, + "n_pred": 2070, + "n_ref": 2352 + }, + "3": { + "Dice": 0.9466720128307939, + "FN": 229, + "FP": 37, + "IoU": 0.898743814236772, + "TN": 16573, + "TP": 2361, + "n_pred": 2398, + "n_ref": 2590 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9143014985152959, + "FN": 584, + "FP": 657, + "IoU": 0.842132044269177, + "TN": 11339, + "TP": 6620, + "n_pred": 7277, + "n_ref": 7204 + }, + "2": { + "Dice": 0.6992263056092843, + "FN": 335, + "FP": 287, + "IoU": 0.537546468401487, + "TN": 17855, + "TP": 723, + "n_pred": 1010, + "n_ref": 1058 + }, + "3": { + "Dice": 0.7812895069532237, + "FN": 336, + "FP": 10, + "IoU": 0.6410788381742739, + "TN": 18236, + "TP": 618, + "n_pred": 628, + "n_ref": 954 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8713534194165471, + "FN": 235, + "FP": 34, + "IoU": 0.7720338983050847, + "TN": 5220, + "TP": 911, + "n_pred": 945, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7643097643097643, + "FN": 110, + "FP": 310, + "IoU": 0.6185286103542235, + "TN": 5299, + "TP": 681, + "n_pred": 991, + "n_ref": 791 + }, + "3": { + "Dice": 0.7652886914929963, + "FN": 189, + "FP": 498, + "IoU": 0.6198118428334256, + "TN": 4593, + "TP": 1120, + "n_pred": 1618, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9730668983492615, + "FN": 80, + "FP": 44, + "IoU": 0.9475465313028765, + "TN": 4036, + "TP": 2240, + "n_pred": 2284, + "n_ref": 2320 + }, + "2": { + "Dice": 0.9077598828696926, + "FN": 18, + "FP": 45, + "IoU": 0.8310991957104558, + "TN": 6027, + "TP": 310, + "n_pred": 355, + "n_ref": 328 + }, + "3": { + "Dice": 0.7433628318584071, + "FN": 29, + "FP": 0, + "IoU": 0.5915492957746479, + "TN": 6329, + "TP": 42, + "n_pred": 42, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8738864596986202, + "FN": 163.02564102564102, + "FP": 139.23076923076923, + "IoU": 0.7992809993993407, + "TN": 10950.17948717949, + "TP": 1547.5641025641028, + "n_pred": 1686.7948717948718, + "n_ref": 1710.5897435897434 + }, + "mean": { + "1": { + "Dice": 0.8082749383079915, + "FN": 248.07692307692307, + "FP": 204.53846153846155, + "IoU": 0.7248303538115254, + "TN": 10624.961538461539, + "TP": 1722.423076923077, + "n_pred": 1926.9615384615386, + "n_ref": 1970.5 + }, + "2": { + "Dice": 0.8852028071022384, + "FN": 163.6153846153846, + "FP": 143.73076923076923, + "IoU": 0.7974406646859689, + "TN": 11304.846153846154, + "TP": 1187.8076923076924, + "n_pred": 1331.5384615384614, + "n_ref": 1351.423076923077 + }, + "3": { + "Dice": 0.9281816336856307, + "FN": 77.38461538461539, + "FP": 69.42307692307692, + "IoU": 0.875571979700528, + "TN": 10920.73076923077, + "TP": 1732.4615384615386, + "n_pred": 1801.8846153846155, + "n_ref": 1809.8461538461538 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.5549930971007824, + "FN": 965, + "FP": 2, + "IoU": 0.38407643312101913, + "TN": 11230, + "TP": 603, + "n_pred": 605, + "n_ref": 1568 + }, + "2": { + "Dice": 0.875, + "FN": 132, + "FP": 68, + "IoU": 0.7777777777777778, + "TN": 11900, + "TP": 700, + "n_pred": 768, + "n_ref": 832 + }, + "3": { + "Dice": 0.9242685025817556, + "FN": 59, + "FP": 29, + "IoU": 0.8592, + "TN": 12175, + "TP": 537, + "n_pred": 566, + "n_ref": 596 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9634408602150538, + "FN": 80, + "FP": 294, + "IoU": 0.9294605809128631, + "TN": 7498, + "TP": 4928, + "n_pred": 5222, + "n_ref": 5008 + }, + "2": { + "Dice": 0.8798200514138818, + "FN": 169, + "FP": 205, + "IoU": 0.7854274239816409, + "TN": 11057, + "TP": 1369, + "n_pred": 1574, + "n_ref": 1538 + }, + "3": { + "Dice": 0.9680346463188286, + "FN": 133, + "FP": 22, + "IoU": 0.9380495603517186, + "TN": 10298, + "TP": 2347, + "n_pred": 2369, + "n_ref": 2480 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9046789447486312, + "FN": 217, + "FP": 549, + "IoU": 0.8259486480345376, + "TN": 21199, + "TP": 3635, + "n_pred": 4184, + "n_ref": 3852 + }, + "2": { + "Dice": 0.8887435981257491, + "FN": 662, + "FP": 359, + "IoU": 0.7997646597372033, + "TN": 20501, + "TP": 4078, + "n_pred": 4437, + "n_ref": 4740 + }, + "3": { + "Dice": 0.9715807142443711, + "FN": 143, + "FP": 348, + "IoU": 0.944732102656461, + "TN": 16716, + "TP": 8393, + "n_pred": 8741, + "n_ref": 8536 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8497854077253219, + "FN": 58, + "FP": 12, + "IoU": 0.7388059701492538, + "TN": 25332, + "TP": 198, + "n_pred": 210, + "n_ref": 256 + }, + "2": { + "Dice": 0.8721258572004841, + "FN": 273, + "FP": 678, + "IoU": 0.7732474964234621, + "TN": 21406, + "TP": 3243, + "n_pred": 3921, + "n_ref": 3516 + }, + "3": { + "Dice": 0.9710581456259821, + "FN": 313, + "FP": 129, + "IoU": 0.9437444317169403, + "TN": 17743, + "TP": 7415, + "n_pred": 7544, + "n_ref": 7728 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.978869297509096, + "FN": 77, + "FP": 225, + "IoU": 0.9586131286830204, + "TN": 5503, + "TP": 6995, + "n_pred": 7220, + "n_ref": 7072 + }, + "2": { + "Dice": 0.8550898203592814, + "FN": 143, + "FP": 220, + "IoU": 0.7468619246861925, + "TN": 11366, + "TP": 1071, + "n_pred": 1291, + "n_ref": 1214 + }, + "3": { + "Dice": 0.9676846590909091, + "FN": 149, + "FP": 33, + "IoU": 0.9373925008599931, + "TN": 9893, + "TP": 2725, + "n_pred": 2758, + "n_ref": 2874 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6311926605504588, + "FN": 1398, + "FP": 9, + "IoU": 0.46112600536193027, + "TN": 10189, + "TP": 1204, + "n_pred": 1213, + "n_ref": 2602 + }, + "2": { + "Dice": 0.9514223194748359, + "FN": 77, + "FP": 34, + "IoU": 0.9073455759599333, + "TN": 11602, + "TP": 1087, + "n_pred": 1121, + "n_ref": 1164 + }, + "3": { + "Dice": 0.9912245712006382, + "FN": 13, + "FP": 31, + "IoU": 0.9826018189007513, + "TN": 10271, + "TP": 2485, + "n_pred": 2516, + "n_ref": 2498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8153846153846154, + "FN": 313, + "FP": 47, + "IoU": 0.6883116883116883, + "TN": 18045, + "TP": 795, + "n_pred": 842, + "n_ref": 1108 + }, + "2": { + "Dice": 0.9502834714348015, + "FN": 143, + "FP": 85, + "IoU": 0.9052762775238886, + "TN": 16793, + "TP": 2179, + "n_pred": 2264, + "n_ref": 2322 + }, + "3": { + "Dice": 0.8901098901098901, + "FN": 71, + "FP": 29, + "IoU": 0.801980198019802, + "TN": 18695, + "TP": 405, + "n_pred": 434, + "n_ref": 476 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 12798, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + }, + "2": { + "Dice": 0.920622863653627, + "FN": 86, + "FP": 123, + "IoU": 0.8529204785362421, + "TN": 11379, + "TP": 1212, + "n_pred": 1335, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9831127339114559, + "FN": 75, + "FP": 36, + "IoU": 0.966786355475763, + "TN": 9458, + "TP": 3231, + "n_pred": 3267, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5310734463276836, + "FN": 0, + "FP": 166, + "IoU": 0.36153846153846153, + "TN": 12540, + "TP": 94, + "n_pred": 260, + "n_ref": 94 + }, + "2": { + "Dice": 0.8303571428571429, + "FN": 888, + "FP": 24, + "IoU": 0.7099236641221374, + "TN": 9656, + "TP": 2232, + "n_pred": 2256, + "n_ref": 3120 + }, + "3": { + "Dice": 0.8382066276803118, + "FN": 20, + "FP": 146, + "IoU": 0.7214765100671141, + "TN": 12204, + "TP": 430, + "n_pred": 576, + "n_ref": 450 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 18, + "FP": 0, + "IoU": 0.0, + "TN": 6382, + "TP": 0, + "n_pred": 0, + "n_ref": 18 + }, + "2": { + "Dice": 0.9209621993127147, + "FN": 54, + "FP": 15, + "IoU": 0.8535031847133758, + "TN": 5929, + "TP": 402, + "n_pred": 417, + "n_ref": 456 + }, + "3": { + "Dice": 0.9393139841688655, + "FN": 0, + "FP": 23, + "IoU": 0.8855721393034826, + "TN": 6199, + "TP": 178, + "n_pred": 201, + "n_ref": 178 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8220320386219003, + "FN": 171, + "FP": 640, + "IoU": 0.6978390461997019, + "TN": 16516, + "TP": 1873, + "n_pred": 2513, + "n_ref": 2044 + }, + "2": { + "Dice": 0.913253518168452, + "FN": 96, + "FP": 317, + "IoU": 0.8403556242752223, + "TN": 16613, + "TP": 2174, + "n_pred": 2491, + "n_ref": 2270 + }, + "3": { + "Dice": 0.9414694894146949, + "FN": 34, + "FP": 60, + "IoU": 0.8894117647058823, + "TN": 18350, + "TP": 756, + "n_pred": 816, + "n_ref": 790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9574736842105264, + "FN": 137, + "FP": 166, + "IoU": 0.9184168012924071, + "TN": 9086, + "TP": 3411, + "n_pred": 3577, + "n_ref": 3548 + }, + "2": { + "Dice": 0.9175582127123977, + "FN": 65, + "FP": 66, + "IoU": 0.8476744186046512, + "TN": 11940, + "TP": 729, + "n_pred": 795, + "n_ref": 794 + }, + "3": { + "Dice": 0.9661610268378062, + "FN": 56, + "FP": 2, + "IoU": 0.9345372460496614, + "TN": 11914, + "TP": 828, + "n_pred": 830, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8274352426121854, + "FN": 50, + "FP": 423, + "IoU": 0.7056627255756067, + "TN": 11193, + "TP": 1134, + "n_pred": 1557, + "n_ref": 1184 + }, + "3": { + "Dice": 0.985370146298537, + "FN": 99, + "FP": 34, + "IoU": 0.9711621856027753, + "TN": 8188, + "TP": 4479, + "n_pred": 4513, + "n_ref": 4578 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9507278835386338, + "FN": 192, + "FP": 160, + "IoU": 0.9060832443970117, + "TN": 2652, + "TP": 3396, + "n_pred": 3556, + "n_ref": 3588 + }, + "2": { + "Dice": 0.9690512430238457, + "FN": 27, + "FP": 34, + "IoU": 0.9399606299212598, + "TN": 5384, + "TP": 955, + "n_pred": 989, + "n_ref": 982 + }, + "3": { + "Dice": 0.9910025706940874, + "FN": 9, + "FP": 5, + "IoU": 0.9821656050955414, + "TN": 5615, + "TP": 771, + "n_pred": 776, + "n_ref": 780 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9424692954104719, + "FN": 89, + "FP": 0, + "IoU": 0.89119804400978, + "TN": 5582, + "TP": 729, + "n_pred": 729, + "n_ref": 818 + }, + "2": { + "Dice": 0.8846960167714885, + "FN": 163, + "FP": 57, + "IoU": 0.793233082706767, + "TN": 5336, + "TP": 844, + "n_pred": 901, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9524442966411706, + "FN": 5, + "FP": 138, + "IoU": 0.9092063492063492, + "TN": 4825, + "TP": 1432, + "n_pred": 1570, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8818082788671024, + "FN": 13, + "FP": 421, + "IoU": 0.7886020457866537, + "TN": 10747, + "TP": 1619, + "n_pred": 2040, + "n_ref": 1632 + }, + "2": { + "Dice": 0.8277992277992278, + "FN": 24, + "FP": 199, + "IoU": 0.7061923583662714, + "TN": 12041, + "TP": 536, + "n_pred": 735, + "n_ref": 560 + }, + "3": { + "Dice": 0.6171761280931587, + "FN": 2, + "FP": 524, + "IoU": 0.4463157894736842, + "TN": 11850, + "TP": 424, + "n_pred": 948, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9443147715905301, + "FN": 134, + "FP": 33, + "IoU": 0.8945041061276058, + "TN": 11217, + "TP": 1416, + "n_pred": 1449, + "n_ref": 1550 + }, + "2": { + "Dice": 0.8872832369942196, + "FN": 152, + "FP": 82, + "IoU": 0.7974025974025974, + "TN": 11645, + "TP": 921, + "n_pred": 1003, + "n_ref": 1073 + }, + "3": { + "Dice": 0.9013490725126475, + "FN": 212, + "FP": 22, + "IoU": 0.8204144282425173, + "TN": 11497, + "TP": 1069, + "n_pred": 1091, + "n_ref": 1281 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8784542314335061, + "FN": 911, + "FP": 215, + "IoU": 0.7832531280076998, + "TN": 14005, + "TP": 4069, + "n_pred": 4284, + "n_ref": 4980 + }, + "2": { + "Dice": 0.7456059204440333, + "FN": 292, + "FP": 258, + "IoU": 0.5943952802359882, + "TN": 17844, + "TP": 806, + "n_pred": 1064, + "n_ref": 1098 + }, + "3": { + "Dice": 0.9349190617773373, + "FN": 159, + "FP": 38, + "IoU": 0.8777915632754343, + "TN": 17588, + "TP": 1415, + "n_pred": 1453, + "n_ref": 1574 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9804816223067173, + "FN": 31, + "FP": 46, + "IoU": 0.9617105917454003, + "TN": 4389, + "TP": 1934, + "n_pred": 1980, + "n_ref": 1965 + }, + "2": { + "Dice": 0.9025787965616046, + "FN": 72, + "FP": 132, + "IoU": 0.8224543080939948, + "TN": 5251, + "TP": 945, + "n_pred": 1077, + "n_ref": 1017 + }, + "3": { + "Dice": 0.978367958877704, + "FN": 87, + "FP": 14, + "IoU": 0.9576519916142557, + "TN": 4015, + "TP": 2284, + "n_pred": 2298, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6443470639789658, + "FN": 19, + "FP": 2010, + "IoU": 0.4753038531161107, + "TN": 15333, + "TP": 1838, + "n_pred": 3848, + "n_ref": 1857 + }, + "2": { + "Dice": 0.9226698029991179, + "FN": 190, + "FP": 73, + "IoU": 0.8564410480349345, + "TN": 17368, + "TP": 1569, + "n_pred": 1642, + "n_ref": 1759 + }, + "3": { + "Dice": 0.96640625, + "FN": 50, + "FP": 36, + "IoU": 0.9349962207105065, + "TN": 17877, + "TP": 1237, + "n_pred": 1273, + "n_ref": 1287 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9401566927821303, + "FN": 82, + "FP": 277, + "IoU": 0.887071406102548, + "TN": 9621, + "TP": 2820, + "n_pred": 3097, + "n_ref": 2902 + }, + "2": { + "Dice": 0.8777689873417721, + "FN": 365, + "FP": 253, + "IoU": 0.7821642580190342, + "TN": 9963, + "TP": 2219, + "n_pred": 2472, + "n_ref": 2584 + }, + "3": { + "Dice": 0.9471127900701565, + "FN": 97, + "FP": 99, + "IoU": 0.8995386981035366, + "TN": 10849, + "TP": 1755, + "n_pred": 1854, + "n_ref": 1852 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8020898121656922, + "FN": 1545, + "FP": 46, + "IoU": 0.6695742471443406, + "TN": 7985, + "TP": 3224, + "n_pred": 3270, + "n_ref": 4769 + }, + "2": { + "Dice": 0.8543342269883825, + "FN": 131, + "FP": 32, + "IoU": 0.7457098283931357, + "TN": 12159, + "TP": 478, + "n_pred": 510, + "n_ref": 609 + }, + "3": { + "Dice": 0.7936226749335695, + "FN": 226, + "FP": 7, + "IoU": 0.657856093979442, + "TN": 12119, + "TP": 448, + "n_pred": 455, + "n_ref": 674 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.783828887241843, + "FN": 207.94871794871798, + "FP": 381.2564102564102, + "IoU": 0.7027788826560607, + "TN": 11295.243589743588, + "TP": 1161.7051282051282, + "n_pred": 1542.9615384615383, + "n_ref": 1369.6538461538464 + }, + "mean": { + "1": { + "Dice": 0.7325577553927196, + "FN": 356.2307692307692, + "FP": 418.7307692307692, + "IoU": 0.6380442923662051, + "TN": 10871.384615384615, + "TP": 1399.8076923076924, + "n_pred": 1818.5384615384614, + "n_ref": 1756.0384615384614 + }, + "2": { + "Dice": 0.7760819434539474, + "FN": 146.92307692307693, + "FP": 263.53846153846155, + "IoU": 0.6895153360671356, + "TN": 11750.038461538461, + "TP": 885.6538461538462, + "n_pred": 1149.1923076923076, + "n_ref": 1032.576923076923 + }, + "3": { + "Dice": 0.842846962878862, + "FN": 120.6923076923077, + "FP": 461.5, + "IoU": 0.7807770195348416, + "TN": 11264.307692307691, + "TP": 1199.6538461538462, + "n_pred": 1661.1538461538462, + "n_ref": 1320.3461538461538 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.969189350882441, + "FN": 50, + "FP": 53, + "IoU": 0.9402205455600696, + "TN": 4677, + "TP": 1620, + "n_pred": 1673, + "n_ref": 1670 + }, + "2": { + "Dice": 0.9136490250696379, + "FN": 118, + "FP": 37, + "IoU": 0.841025641025641, + "TN": 5425, + "TP": 820, + "n_pred": 857, + "n_ref": 938 + }, + "3": { + "Dice": 0.979187314172448, + "FN": 22, + "FP": 20, + "IoU": 0.9592233009708738, + "TN": 5370, + "TP": 988, + "n_pred": 1008, + "n_ref": 1010 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 3691, + "IoU": 0.0, + "TN": 21909, + "TP": 0, + "n_pred": 3691, + "n_ref": 0 + }, + "2": { + "Dice": 0.8524847770575525, + "FN": 167, + "FP": 584, + "IoU": 0.7428962684012325, + "TN": 22679, + "TP": 2170, + "n_pred": 2754, + "n_ref": 2337 + }, + "3": { + "Dice": 0.9659080522804131, + "FN": 258, + "FP": 115, + "IoU": 0.9340639915149372, + "TN": 19943, + "TP": 5284, + "n_pred": 5399, + "n_ref": 5542 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8543689320388349, + "FN": 10, + "FP": 5, + "IoU": 0.7457627118644068, + "TN": 12741, + "TP": 44, + "n_pred": 49, + "n_ref": 54 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9704565801253358, + "FN": 218, + "FP": 46, + "IoU": 0.9426086956521739, + "TN": 8200, + "TP": 4336, + "n_pred": 4382, + "n_ref": 4554 + }, + "2": { + "Dice": 0.9507829977628636, + "FN": 62, + "FP": 26, + "IoU": 0.906183368869936, + "TN": 11862, + "TP": 850, + "n_pred": 876, + "n_ref": 912 + }, + "3": { + "Dice": 0.6666666666666666, + "FN": 8, + "FP": 0, + "IoU": 0.5, + "TN": 12784, + "TP": 8, + "n_pred": 8, + "n_ref": 16 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8589155651470192, + "FN": 446, + "FP": 77, + "IoU": 0.7527186761229314, + "TN": 10685, + "TP": 1592, + "n_pred": 1669, + "n_ref": 2038 + }, + "2": { + "Dice": 0.9391721352852095, + "FN": 206, + "FP": 276, + "IoU": 0.8853200095170116, + "TN": 8597, + "TP": 3721, + "n_pred": 3997, + "n_ref": 3927 + }, + "3": { + "Dice": 0.9750573007954698, + "FN": 138, + "FP": 47, + "IoU": 0.9513285977374375, + "TN": 8999, + "TP": 3616, + "n_pred": 3663, + "n_ref": 3754 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4747292418772563, + "FN": 239, + "FP": 343, + "IoU": 0.31124260355029587, + "TN": 11955, + "TP": 263, + "n_pred": 606, + "n_ref": 502 + }, + "2": { + "Dice": 0.7934945431200514, + "FN": 368, + "FP": 597, + "IoU": 0.6576800283788578, + "TN": 9981, + "TP": 1854, + "n_pred": 2451, + "n_ref": 2222 + }, + "3": { + "Dice": 0.7984886649874056, + "FN": 4, + "FP": 316, + "IoU": 0.6645702306079665, + "TN": 11846, + "TP": 634, + "n_pred": 950, + "n_ref": 638 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7801724137931034, + "FN": 23, + "FP": 181, + "IoU": 0.6395759717314488, + "TN": 5834, + "TP": 362, + "n_pred": 543, + "n_ref": 385 + }, + "2": { + "Dice": 0.8824677860210856, + "FN": 81, + "FP": 220, + "IoU": 0.7896575821104123, + "TN": 4969, + "TP": 1130, + "n_pred": 1350, + "n_ref": 1211 + }, + "3": { + "Dice": 0.9687429727906454, + "FN": 78, + "FP": 61, + "IoU": 0.9393807239424335, + "TN": 4107, + "TP": 2154, + "n_pred": 2215, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8225108225108225, + "FN": 38, + "FP": 208, + "IoU": 0.6985294117647058, + "TN": 11984, + "TP": 570, + "n_pred": 778, + "n_ref": 608 + }, + "3": { + "Dice": 0.9613788700925631, + "FN": 98, + "FP": 23, + "IoU": 0.9256299938537185, + "TN": 11173, + "TP": 1506, + "n_pred": 1529, + "n_ref": 1604 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8840970350404312, + "FN": 64, + "FP": 280, + "IoU": 0.7922705314009661, + "TN": 11144, + "TP": 1312, + "n_pred": 1592, + "n_ref": 1376 + }, + "2": { + "Dice": 0.9453488372093023, + "FN": 33, + "FP": 61, + "IoU": 0.896361631753032, + "TN": 11893, + "TP": 813, + "n_pred": 874, + "n_ref": 846 + }, + "3": { + "Dice": 0.9697648376259799, + "FN": 13, + "FP": 14, + "IoU": 0.941304347826087, + "TN": 12340, + "TP": 433, + "n_pred": 447, + "n_ref": 446 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9656203288490284, + "FN": 5, + "FP": 18, + "IoU": 0.9335260115606936, + "TN": 6054, + "TP": 323, + "n_pred": 341, + "n_ref": 328 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 6396, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8393098274568642, + "FN": 1061, + "FP": 10, + "IoU": 0.7231127197518097, + "TN": 8932, + "TP": 2797, + "n_pred": 2807, + "n_ref": 3858 + }, + "2": { + "Dice": 0.9462647444298821, + "FN": 36, + "FP": 46, + "IoU": 0.8980099502487562, + "TN": 11996, + "TP": 722, + "n_pred": 768, + "n_ref": 758 + }, + "3": { + "Dice": 0.9748803827751196, + "FN": 15, + "FP": 27, + "IoU": 0.9509918319719953, + "TN": 11943, + "TP": 815, + "n_pred": 842, + "n_ref": 830 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8838896952104499, + "FN": 170, + "FP": 310, + "IoU": 0.7919375812743823, + "TN": 10493, + "TP": 1827, + "n_pred": 2137, + "n_ref": 1997 + }, + "2": { + "Dice": 0.8972922502334267, + "FN": 71, + "FP": 149, + "IoU": 0.8137171888230313, + "TN": 11619, + "TP": 961, + "n_pred": 1110, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9257585539057457, + "FN": 89, + "FP": 26, + "IoU": 0.8617788461538461, + "TN": 11968, + "TP": 717, + "n_pred": 743, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7832254085723096, + "FN": 574, + "FP": 129, + "IoU": 0.6436898124683224, + "TN": 17227, + "TP": 1270, + "n_pred": 1399, + "n_ref": 1844 + }, + "2": { + "Dice": 0.8946657663740716, + "FN": 41, + "FP": 271, + "IoU": 0.8094074526573, + "TN": 17563, + "TP": 1325, + "n_pred": 1596, + "n_ref": 1366 + }, + "3": { + "Dice": 0.9539406345957011, + "FN": 4, + "FP": 41, + "IoU": 0.9119373776908023, + "TN": 18689, + "TP": 466, + "n_pred": 507, + "n_ref": 470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9389033942558747, + "FN": 70, + "FP": 47, + "IoU": 0.8848425196850394, + "TN": 5384, + "TP": 899, + "n_pred": 946, + "n_ref": 969 + }, + "3": { + "Dice": 0.9837037037037037, + "FN": 37, + "FP": 7, + "IoU": 0.967930029154519, + "TN": 5028, + "TP": 1328, + "n_pred": 1335, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6234864062143021, + "FN": 1689, + "FP": 1607, + "IoU": 0.4529460580912863, + "TN": 19575, + "TP": 2729, + "n_pred": 4336, + "n_ref": 4418 + }, + "2": { + "Dice": 0.6715953307392996, + "FN": 1474, + "FP": 214, + "IoU": 0.5055653192735794, + "TN": 22186, + "TP": 1726, + "n_pred": 1940, + "n_ref": 3200 + }, + "3": { + "Dice": 0.8340334404085331, + "FN": 1827, + "FP": 188, + "IoU": 0.7153150607516248, + "TN": 18522, + "TP": 5063, + "n_pred": 5251, + "n_ref": 6890 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7786660303066459, + "FN": 1343, + "FP": 512, + "IoU": 0.6375537319265338, + "TN": 7682, + "TP": 3263, + "n_pred": 3775, + "n_ref": 4606 + }, + "2": { + "Dice": 0.73112265281662, + "FN": 510, + "FP": 163, + "IoU": 0.5761964735516373, + "TN": 11212, + "TP": 915, + "n_pred": 1078, + "n_ref": 1425 + }, + "3": { + "Dice": 0.885099245177523, + "FN": 271, + "FP": 140, + "IoU": 0.7938816449348044, + "TN": 10806, + "TP": 1583, + "n_pred": 1723, + "n_ref": 1854 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9704285830025116, + "FN": 194, + "FP": 171, + "IoU": 0.94255587031791, + "TN": 6446, + "TP": 5989, + "n_pred": 6160, + "n_ref": 6183 + }, + "2": { + "Dice": 0.9344059405940595, + "FN": 141, + "FP": 71, + "IoU": 0.8768873403019745, + "TN": 11078, + "TP": 1510, + "n_pred": 1581, + "n_ref": 1651 + }, + "3": { + "Dice": 0.9838462846454684, + "FN": 34, + "FP": 61, + "IoU": 0.9682061579651942, + "TN": 9812, + "TP": 2893, + "n_pred": 2954, + "n_ref": 2927 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9378151260504202, + "FN": 23, + "FP": 14, + "IoU": 0.8829113924050633, + "TN": 6084, + "TP": 279, + "n_pred": 293, + "n_ref": 302 + }, + "2": { + "Dice": 0.8729703915950334, + "FN": 136, + "FP": 130, + "IoU": 0.7745762711864407, + "TN": 5220, + "TP": 914, + "n_pred": 1044, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9609671848013817, + "FN": 113, + "FP": 0, + "IoU": 0.9248670212765957, + "TN": 4896, + "TP": 1391, + "n_pred": 1391, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7393207282913166, + "FN": 2935, + "FP": 43, + "IoU": 0.5864463268990417, + "TN": 5599, + "TP": 4223, + "n_pred": 4266, + "n_ref": 7158 + }, + "2": { + "Dice": 0.8508880627839736, + "FN": 201, + "FP": 160, + "IoU": 0.7404744787922358, + "TN": 11409, + "TP": 1030, + "n_pred": 1190, + "n_ref": 1231 + }, + "3": { + "Dice": 0.9446522064323112, + "FN": 45, + "FP": 103, + "IoU": 0.8951098511693835, + "TN": 11389, + "TP": 1263, + "n_pred": 1366, + "n_ref": 1308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7501034340091022, + "FN": 67, + "FP": 1141, + "IoU": 0.6001324064879179, + "TN": 3379, + "TP": 1813, + "n_pred": 2954, + "n_ref": 1880 + }, + "2": { + "Dice": 0.8882410106899903, + "FN": 11, + "FP": 104, + "IoU": 0.798951048951049, + "TN": 5828, + "TP": 457, + "n_pred": 561, + "n_ref": 468 + }, + "3": { + "Dice": 0.7047619047619048, + "FN": 16, + "FP": 201, + "IoU": 0.5441176470588235, + "TN": 5924, + "TP": 259, + "n_pred": 460, + "n_ref": 275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7091715976331361, + "FN": 161, + "FP": 1805, + "IoU": 0.5493926197570479, + "TN": 27637, + "TP": 2397, + "n_pred": 4202, + "n_ref": 2558 + }, + "2": { + "Dice": 0.4931733553992553, + "FN": 46, + "FP": 1179, + "IoU": 0.3272926963207029, + "TN": 30179, + "TP": 596, + "n_pred": 1775, + "n_ref": 642 + }, + "3": { + "Dice": 0.4201010369582558, + "FN": 68, + "FP": 2113, + "IoU": 0.26590373611578594, + "TN": 29029, + "TP": 790, + "n_pred": 2903, + "n_ref": 858 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 456, + "IoU": 0.0, + "TN": 31544, + "TP": 0, + "n_pred": 456, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2300, + "IoU": 0.0, + "TN": 29700, + "TP": 0, + "n_pred": 2300, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 8496, + "IoU": 0.0, + "TN": 23504, + "TP": 0, + "n_pred": 8496, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8342780616261857, + "FN": 108.21794871794873, + "FP": 149.8717948717949, + "IoU": 0.7564899697081824, + "TN": 8910.448717948719, + "TP": 1169.923076923077, + "n_pred": 1319.7948717948718, + "n_ref": 1278.1410256410256 + }, + "mean": { + "1": { + "Dice": 0.7707539499718306, + "FN": 98.3076923076923, + "FP": 161.65384615384616, + "IoU": 0.6896468679430037, + "TN": 9037.884615384615, + "TP": 1040.6153846153845, + "n_pred": 1202.2692307692307, + "n_ref": 1138.923076923077 + }, + "2": { + "Dice": 0.816277928604832, + "FN": 172.26923076923077, + "FP": 147.92307692307693, + "IoU": 0.7225903243986326, + "TN": 8903.346153846154, + "TP": 1114.923076923077, + "n_pred": 1262.8461538461538, + "n_ref": 1287.1923076923076 + }, + "3": { + "Dice": 0.9158023063018943, + "FN": 54.07692307692308, + "FP": 140.03846153846155, + "IoU": 0.857232716782911, + "TN": 8790.115384615385, + "TP": 1354.2307692307693, + "n_pred": 1494.2692307692307, + "n_ref": 1408.3076923076924 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9549132947976878, + "FN": 244, + "FP": 68, + "IoU": 0.9137168141592921, + "TN": 9184, + "TP": 3304, + "n_pred": 3372, + "n_ref": 3548 + }, + "2": { + "Dice": 0.9275012083131948, + "FN": 141, + "FP": 159, + "IoU": 0.864803965750338, + "TN": 10581, + "TP": 1919, + "n_pred": 2078, + "n_ref": 2060 + }, + "3": { + "Dice": 0.9808051639205028, + "FN": 63, + "FP": 50, + "IoU": 0.9623333333333334, + "TN": 9800, + "TP": 2887, + "n_pred": 2937, + "n_ref": 2950 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7377777777777778, + "FN": 53, + "FP": 360, + "IoU": 0.5845070422535211, + "TN": 5406, + "TP": 581, + "n_pred": 941, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9090909090909091, + "FN": 2, + "FP": 10, + "IoU": 0.8333333333333334, + "TN": 12728, + "TP": 60, + "n_pred": 70, + "n_ref": 62 + }, + "2": { + "Dice": 0.797146678555506, + "FN": 264, + "FP": 191, + "IoU": 0.6627131208302446, + "TN": 11451, + "TP": 894, + "n_pred": 1085, + "n_ref": 1158 + }, + "3": { + "Dice": 0.9641450358549641, + "FN": 105, + "FP": 250, + "IoU": 0.9307722308892356, + "TN": 7672, + "TP": 4773, + "n_pred": 5023, + "n_ref": 4878 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7182288671650374, + "FN": 909, + "FP": 71, + "IoU": 0.560340960071781, + "TN": 10571, + "TP": 1249, + "n_pred": 1320, + "n_ref": 2158 + }, + "2": { + "Dice": 0.8729395604395604, + "FN": 289, + "FP": 81, + "IoU": 0.7745277269957344, + "TN": 11159, + "TP": 1271, + "n_pred": 1352, + "n_ref": 1560 + }, + "3": { + "Dice": 0.9582975064488392, + "FN": 43, + "FP": 151, + "IoU": 0.9199339661576558, + "TN": 10377, + "TP": 2229, + "n_pred": 2380, + "n_ref": 2272 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9652233208319128, + "FN": 137, + "FP": 67, + "IoU": 0.9327841845140032, + "TN": 3365, + "TP": 2831, + "n_pred": 2898, + "n_ref": 2968 + }, + "2": { + "Dice": 0.9381563593932322, + "FN": 90, + "FP": 16, + "IoU": 0.8835164835164835, + "TN": 5490, + "TP": 804, + "n_pred": 820, + "n_ref": 894 + }, + "3": { + "Dice": 0.9829424307036247, + "FN": 1, + "FP": 47, + "IoU": 0.9664570230607966, + "TN": 4969, + "TP": 1383, + "n_pred": 1430, + "n_ref": 1384 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9791758972086841, + "FN": 83, + "FP": 58, + "IoU": 0.9592013888888888, + "TN": 9344, + "TP": 3315, + "n_pred": 3373, + "n_ref": 3398 + }, + "2": { + "Dice": 0.8024526792855239, + "FN": 601, + "FP": 140, + "IoU": 0.6700801424755121, + "TN": 10554, + "TP": 1505, + "n_pred": 1645, + "n_ref": 2106 + }, + "3": { + "Dice": 0.9640544764456351, + "FN": 242, + "FP": 80, + "IoU": 0.930603448275862, + "TN": 8160, + "TP": 4318, + "n_pred": 4398, + "n_ref": 4560 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8524964336661911, + "FN": 24, + "FP": 493, + "IoU": 0.7429139731476877, + "TN": 10789, + "TP": 1494, + "n_pred": 1987, + "n_ref": 1518 + }, + "2": { + "Dice": 0.9494584837545126, + "FN": 44, + "FP": 40, + "IoU": 0.9037800687285223, + "TN": 11927, + "TP": 789, + "n_pred": 829, + "n_ref": 833 + }, + "3": { + "Dice": 0.9476744186046512, + "FN": 6, + "FP": 12, + "IoU": 0.9005524861878453, + "TN": 12619, + "TP": 163, + "n_pred": 175, + "n_ref": 169 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9623210248681235, + "FN": 93, + "FP": 7, + "IoU": 0.9273783587509078, + "TN": 11423, + "TP": 1277, + "n_pred": 1284, + "n_ref": 1370 + }, + "2": { + "Dice": 0.9065800162469537, + "FN": 122, + "FP": 108, + "IoU": 0.8291233283803864, + "TN": 11454, + "TP": 1116, + "n_pred": 1224, + "n_ref": 1238 + }, + "3": { + "Dice": 0.9822695035460993, + "FN": 22, + "FP": 38, + "IoU": 0.9651567944250871, + "TN": 11078, + "TP": 1662, + "n_pred": 1700, + "n_ref": 1684 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8636809414841451, + "FN": 319, + "FP": 98, + "IoU": 0.7600690448791715, + "TN": 23862, + "TP": 1321, + "n_pred": 1419, + "n_ref": 1640 + }, + "2": { + "Dice": 0.8682835615684981, + "FN": 1000, + "FP": 1395, + "IoU": 0.7672271357760715, + "TN": 15311, + "TP": 7894, + "n_pred": 9289, + "n_ref": 8894 + }, + "3": { + "Dice": 0.6530236836054265, + "FN": 254, + "FP": 1255, + "IoU": 0.48480710139979516, + "TN": 22671, + "TP": 1420, + "n_pred": 2675, + "n_ref": 1674 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 25, + "IoU": 0.0, + "TN": 25575, + "TP": 0, + "n_pred": 25, + "n_ref": 0 + }, + "2": { + "Dice": 0.8720173535791758, + "FN": 14, + "FP": 104, + "IoU": 0.7730769230769231, + "TN": 25080, + "TP": 402, + "n_pred": 506, + "n_ref": 416 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 25600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9412097230073487, + "FN": 74, + "FP": 134, + "IoU": 0.8889482114255206, + "TN": 4527, + "TP": 1665, + "n_pred": 1799, + "n_ref": 1739 + }, + "3": { + "Dice": 0.9528558476881233, + "FN": 66, + "FP": 38, + "IoU": 0.90995670995671, + "TN": 5245, + "TP": 1051, + "n_pred": 1089, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.780045351473923, + "FN": 130, + "FP": 64, + "IoU": 0.6394052044609665, + "TN": 12262, + "TP": 344, + "n_pred": 408, + "n_ref": 474 + }, + "3": { + "Dice": 0.7610062893081762, + "FN": 33, + "FP": 43, + "IoU": 0.6142131979695431, + "TN": 12603, + "TP": 121, + "n_pred": 164, + "n_ref": 154 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6666666666666666, + "FN": 6, + "FP": 12, + "IoU": 0.5, + "TN": 6364, + "TP": 18, + "n_pred": 30, + "n_ref": 24 + }, + "2": { + "Dice": 0.909912624284423, + "FN": 178, + "FP": 121, + "IoU": 0.8347153123272526, + "TN": 4591, + "TP": 1510, + "n_pred": 1631, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9732596186392869, + "FN": 95, + "FP": 142, + "IoU": 0.9479120879120879, + "TN": 1850, + "TP": 4313, + "n_pred": 4455, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9059602649006623, + "FN": 98, + "FP": 44, + "IoU": 0.8280871670702179, + "TN": 5574, + "TP": 684, + "n_pred": 728, + "n_ref": 782 + }, + "3": { + "Dice": 0.9844346549192364, + "FN": 7, + "FP": 46, + "IoU": 0.9693464430306535, + "TN": 4671, + "TP": 1676, + "n_pred": 1722, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.75, + "FN": 10, + "FP": 26, + "IoU": 0.6, + "TN": 6310, + "TP": 54, + "n_pred": 80, + "n_ref": 64 + }, + "2": { + "Dice": 0.8972222222222223, + "FN": 103, + "FP": 119, + "IoU": 0.8136020151133502, + "TN": 5209, + "TP": 969, + "n_pred": 1088, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9766321368344977, + "FN": 27, + "FP": 70, + "IoU": 0.954331450094162, + "TN": 4276, + "TP": 2027, + "n_pred": 2097, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7776923076923077, + "FN": 174, + "FP": 2138, + "IoU": 0.6362492133417244, + "TN": 6444, + "TP": 4044, + "n_pred": 6182, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8608655188459748, + "FN": 154, + "FP": 145, + "IoU": 0.755718954248366, + "TN": 11576, + "TP": 925, + "n_pred": 1070, + "n_ref": 1079 + }, + "3": { + "Dice": 0.9151061173533084, + "FN": 118, + "FP": 18, + "IoU": 0.8434982738780207, + "TN": 11931, + "TP": 733, + "n_pred": 751, + "n_ref": 851 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 90, + "IoU": 0.0, + "TN": 6310, + "TP": 0, + "n_pred": 90, + "n_ref": 0 + }, + "2": { + "Dice": 0.7468785471055619, + "FN": 81, + "FP": 142, + "IoU": 0.5960144927536232, + "TN": 5848, + "TP": 329, + "n_pred": 471, + "n_ref": 410 + }, + "3": { + "Dice": 0.7246061922868007, + "FN": 13, + "FP": 494, + "IoU": 0.5681431005110733, + "TN": 5226, + "TP": 667, + "n_pred": 1161, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9501278772378516, + "FN": 150, + "FP": 6, + "IoU": 0.904993909866017, + "TN": 4758, + "TP": 1486, + "n_pred": 1492, + "n_ref": 1636 + }, + "2": { + "Dice": 0.906, + "FN": 68, + "FP": 120, + "IoU": 0.8281535648994516, + "TN": 5306, + "TP": 906, + "n_pred": 1026, + "n_ref": 974 + }, + "3": { + "Dice": 0.9706227967097533, + "FN": 11, + "FP": 64, + "IoU": 0.9429223744292238, + "TN": 5086, + "TP": 1239, + "n_pred": 1303, + "n_ref": 1250 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8919667590027701, + "FN": 6, + "FP": 33, + "IoU": 0.805, + "TN": 6200, + "TP": 161, + "n_pred": 194, + "n_ref": 167 + }, + "2": { + "Dice": 0.5142857142857142, + "FN": 17, + "FP": 0, + "IoU": 0.34615384615384615, + "TN": 6374, + "TP": 9, + "n_pred": 9, + "n_ref": 26 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9267139479905437, + "FN": 20, + "FP": 73, + "IoU": 0.8634361233480177, + "TN": 5719, + "TP": 588, + "n_pred": 661, + "n_ref": 608 + }, + "2": { + "Dice": 0.89035350509287, + "FN": 361, + "FP": 188, + "IoU": 0.8023758099352052, + "TN": 3622, + "TP": 2229, + "n_pred": 2417, + "n_ref": 2590 + }, + "3": { + "Dice": 0.9511918274687855, + "FN": 162, + "FP": 10, + "IoU": 0.9069264069264069, + "TN": 4552, + "TP": 1676, + "n_pred": 1686, + "n_ref": 1838 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9755748838317646, + "FN": 126, + "FP": 79, + "IoU": 0.9523144917422657, + "TN": 8501, + "TP": 4094, + "n_pred": 4173, + "n_ref": 4220 + }, + "2": { + "Dice": 0.8451882845188284, + "FN": 118, + "FP": 30, + "IoU": 0.7318840579710145, + "TN": 12248, + "TP": 404, + "n_pred": 434, + "n_ref": 522 + }, + "3": { + "Dice": 0.9077380952380952, + "FN": 25, + "FP": 37, + "IoU": 0.8310626702997275, + "TN": 12433, + "TP": 305, + "n_pred": 342, + "n_ref": 330 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5833333333333334, + "FN": 188, + "FP": 422, + "IoU": 0.4117647058823529, + "TN": 11763, + "TP": 427, + "n_pred": 849, + "n_ref": 615 + }, + "2": { + "Dice": 0.8256567724326168, + "FN": 532, + "FP": 490, + "IoU": 0.7030796048808832, + "TN": 9358, + "TP": 2420, + "n_pred": 2910, + "n_ref": 2952 + }, + "3": { + "Dice": 0.8495780241601854, + "FN": 113, + "FP": 796, + "IoU": 0.7384925201380897, + "TN": 9324, + "TP": 2567, + "n_pred": 3363, + "n_ref": 2680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9500947567909034, + "FN": 12, + "FP": 67, + "IoU": 0.9049338146811071, + "TN": 5569, + "TP": 752, + "n_pred": 819, + "n_ref": 764 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 15, + "IoU": 0.0, + "TN": 6385, + "TP": 0, + "n_pred": 15, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2677647/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8480142359979969, + "FN": 171.12051282051283, + "FP": 195.10256410256412, + "IoU": 0.7719331351201176, + "TN": 11498.784615384615, + "TP": 1427.3, + "n_pred": 1622.4025641025642, + "n_ref": 1598.4205128205128 + }, + "mean": { + "1": { + "Dice": 0.7992007113468393, + "FN": 249.81538461538463, + "FP": 217.55384615384614, + "IoU": 0.7216161726606364, + "TN": 11096.507692307694, + "TP": 1728.430769230769, + "n_pred": 1945.9846153846152, + "n_ref": 1978.2461538461534 + }, + "2": { + "Dice": 0.8443218394710588, + "FN": 179.3076923076923, + "FP": 176.3846153846154, + "IoU": 0.7535702582147243, + "TN": 11821.9, + "TP": 1114.7153846153847, + "n_pred": 1291.1, + "n_ref": 1294.023076923077 + }, + "3": { + "Dice": 0.9005201571760925, + "FN": 84.23846153846155, + "FP": 191.36923076923077, + "IoU": 0.8406129744849924, + "TN": 11577.946153846151, + "TP": 1438.753846153846, + "n_pred": 1630.123076923077, + "n_ref": 1522.9923076923076 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_003/summary_cross_val.json b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_003/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..6b9d6c997f913dd0ab331a6aca83ac0bc1c7f3d3 --- /dev/null +++ b/nnActive_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/loop_003/summary_cross_val.json @@ -0,0 +1,5316 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8665110422426273, + "FN": 263.4761904761905, + "FP": 276.9404761904762, + "IoU": 0.7880176228255739, + "TN": 15011.416666666666, + "TP": 2048.1666666666665, + "n_pred": 2325.1071428571427, + "n_ref": 2311.6428571428573 + }, + "mean": { + "1": { + "Dice": 0.7898286789078051, + "FN": 358.39285714285717, + "FP": 305.82142857142856, + "IoU": 0.6947516388822291, + "TN": 14922.82142857143, + "TP": 2012.9642857142858, + "n_pred": 2318.785714285714, + "n_ref": 2371.3571428571427 + }, + "2": { + "Dice": 0.8856948446443867, + "FN": 337.39285714285717, + "FP": 269.14285714285717, + "IoU": 0.7983098564453747, + "TN": 14965.357142857143, + "TP": 2028.107142857143, + "n_pred": 2297.25, + "n_ref": 2365.5 + }, + "3": { + "Dice": 0.9240096031756903, + "FN": 94.64285714285714, + "FP": 255.85714285714286, + "IoU": 0.8709913731491178, + "TN": 15146.07142857143, + "TP": 2103.4285714285716, + "n_pred": 2359.285714285714, + "n_ref": 2198.0714285714284 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9185185185185185, + "FN": 0, + "FP": 11, + "IoU": 0.8493150684931506, + "TN": 12727, + "TP": 62, + "n_pred": 73, + "n_ref": 62 + }, + "2": { + "Dice": 0.8217734855136084, + "FN": 222, + "FP": 184, + "IoU": 0.6974664679582713, + "TN": 11458, + "TP": 936, + "n_pred": 1120, + "n_ref": 1158 + }, + "3": { + "Dice": 0.9693226688265668, + "FN": 91, + "FP": 212, + "IoU": 0.9404715127701375, + "TN": 7710, + "TP": 4787, + "n_pred": 4999, + "n_ref": 4878 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9263489562820008, + "FN": 90, + "FP": 97, + "IoU": 0.8628026412325752, + "TN": 11437, + "TP": 1176, + "n_pred": 1273, + "n_ref": 1266 + }, + "3": { + "Dice": 0.9847647748200234, + "FN": 69, + "FP": 22, + "IoU": 0.9699868073878628, + "TN": 9768, + "TP": 2941, + "n_pred": 2963, + "n_ref": 3010 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.791254722289205, + "FN": 2514, + "FP": 83, + "IoU": 0.6546083255752094, + "TN": 5281, + "TP": 4922, + "n_pred": 5005, + "n_ref": 7436 + }, + "2": { + "Dice": 0.9286328460877042, + "FN": 98, + "FP": 68, + "IoU": 0.8667736757624398, + "TN": 11554, + "TP": 1080, + "n_pred": 1148, + "n_ref": 1178 + }, + "3": { + "Dice": 0.9794127573405332, + "FN": 9, + "FP": 52, + "IoU": 0.9596560846560847, + "TN": 11288, + "TP": 1451, + "n_pred": 1503, + "n_ref": 1460 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5937196503722888, + "FN": 1237, + "FP": 18, + "IoU": 0.4221915285451197, + "TN": 55428, + "TP": 917, + "n_pred": 935, + "n_ref": 2154 + }, + "2": { + "Dice": 0.8310626702997275, + "FN": 167, + "FP": 1445, + "IoU": 0.710955710955711, + "TN": 52023, + "TP": 3965, + "n_pred": 5410, + "n_ref": 4132 + }, + "3": { + "Dice": 0.9176696542893726, + "FN": 169, + "FP": 1117, + "IoU": 0.8478646634331006, + "TN": 49147, + "TP": 7167, + "n_pred": 8284, + "n_ref": 7336 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.944263313150132, + "FN": 39, + "FP": 320, + "IoU": 0.8944117647058824, + "TN": 9400, + "TP": 3041, + "n_pred": 3361, + "n_ref": 3080 + }, + "2": { + "Dice": 0.9157873780609198, + "FN": 366, + "FP": 57, + "IoU": 0.8446566287183254, + "TN": 10077, + "TP": 2300, + "n_pred": 2357, + "n_ref": 2666 + }, + "3": { + "Dice": 0.9712189616252822, + "FN": 29, + "FP": 73, + "IoU": 0.9440482720789907, + "TN": 10977, + "TP": 1721, + "n_pred": 1794, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6336414790996785, + "FN": 57, + "FP": 3589, + "IoU": 0.46374466833357847, + "TN": 25201, + "TP": 3153, + "n_pred": 6742, + "n_ref": 3210 + }, + "2": { + "Dice": 0.9019496228831649, + "FN": 366, + "FP": 323, + "IoU": 0.821410057024365, + "TN": 28142, + "TP": 3169, + "n_pred": 3492, + "n_ref": 3535 + }, + "3": { + "Dice": 0.9701678060907396, + "FN": 128, + "FP": 160, + "IoU": 0.9420639710319855, + "TN": 27029, + "TP": 4683, + "n_pred": 4843, + "n_ref": 4811 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9274851632047477, + "FN": 653, + "FP": 129, + "IoU": 0.8647760677848867, + "TN": 19817, + "TP": 5001, + "n_pred": 5130, + "n_ref": 5654 + }, + "2": { + "Dice": 0.8769230769230769, + "FN": 497, + "FP": 447, + "IoU": 0.7808219178082192, + "TN": 21293, + "TP": 3363, + "n_pred": 3810, + "n_ref": 3860 + }, + "3": { + "Dice": 0.912509400852344, + "FN": 324, + "FP": 25, + "IoU": 0.839096357768557, + "TN": 23431, + "TP": 1820, + "n_pred": 1845, + "n_ref": 2144 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8248048568950563, + "FN": 127, + "FP": 277, + "IoU": 0.7018450184501845, + "TN": 37045, + "TP": 951, + "n_pred": 1228, + "n_ref": 1078 + }, + "2": { + "Dice": 0.8181596289968269, + "FN": 3860, + "FP": 610, + "IoU": 0.6922759190417183, + "TN": 23874, + "TP": 10056, + "n_pred": 10666, + "n_ref": 13916 + }, + "3": { + "Dice": 0.6052178193453114, + "FN": 95, + "FP": 3113, + "IoU": 0.4339156520204694, + "TN": 32733, + "TP": 2459, + "n_pred": 5572, + "n_ref": 2554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8513082322910019, + "FN": 306, + "FP": 160, + "IoU": 0.7411111111111112, + "TN": 23800, + "TP": 1334, + "n_pred": 1494, + "n_ref": 1640 + }, + "2": { + "Dice": 0.8639544807965861, + "FN": 1302, + "FP": 1089, + "IoU": 0.7604928378243013, + "TN": 15617, + "TP": 7592, + "n_pred": 8681, + "n_ref": 8894 + }, + "3": { + "Dice": 0.6436181778647532, + "FN": 194, + "FP": 1445, + "IoU": 0.47451106123757614, + "TN": 22481, + "TP": 1480, + "n_pred": 2925, + "n_ref": 1674 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9403899721448468, + "FN": 51, + "FP": 163, + "IoU": 0.8874868559411146, + "TN": 4498, + "TP": 1688, + "n_pred": 1851, + "n_ref": 1739 + }, + "3": { + "Dice": 0.9452873563218391, + "FN": 89, + "FP": 30, + "IoU": 0.8962510897994769, + "TN": 5253, + "TP": 1028, + "n_pred": 1058, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.933486959254216, + "FN": 488, + "FP": 147, + "IoU": 0.8752700844627774, + "TN": 7709, + "TP": 4456, + "n_pred": 4603, + "n_ref": 4944 + }, + "2": { + "Dice": 0.9473097295790354, + "FN": 43, + "FP": 146, + "IoU": 0.8998940677966102, + "TN": 10912, + "TP": 1699, + "n_pred": 1845, + "n_ref": 1742 + }, + "3": { + "Dice": 0.8817204301075269, + "FN": 80, + "FP": 8, + "IoU": 0.7884615384615384, + "TN": 12384, + "TP": 328, + "n_pred": 336, + "n_ref": 408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6996904024767802, + "FN": 13, + "FP": 860, + "IoU": 0.5380952380952381, + "TN": 23710, + "TP": 1017, + "n_pred": 1877, + "n_ref": 1030 + }, + "2": { + "Dice": 0.9004937902139758, + "FN": 395, + "FP": 270, + "IoU": 0.8189983669025586, + "TN": 21926, + "TP": 3009, + "n_pred": 3279, + "n_ref": 3404 + }, + "3": { + "Dice": 0.9717834687931299, + "FN": 223, + "FP": 145, + "IoU": 0.9451155853840417, + "TN": 18895, + "TP": 6337, + "n_pred": 6482, + "n_ref": 6560 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 943, + "IoU": 0.0, + "TN": 11857, + "TP": 0, + "n_pred": 943, + "n_ref": 0 + }, + "2": { + "Dice": 0.89728453364817, + "FN": 12, + "FP": 75, + "IoU": 0.8137044967880086, + "TN": 12333, + "TP": 380, + "n_pred": 455, + "n_ref": 392 + }, + "3": { + "Dice": 0.9722759509993553, + "FN": 36, + "FP": 7, + "IoU": 0.946047678795483, + "TN": 12003, + "TP": 754, + "n_pred": 761, + "n_ref": 790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8193743693239153, + "FN": 72, + "FP": 107, + "IoU": 0.694017094017094, + "TN": 12215, + "TP": 406, + "n_pred": 513, + "n_ref": 478 + }, + "2": { + "Dice": 0.8974056603773585, + "FN": 304, + "FP": 392, + "IoU": 0.813903743315508, + "TN": 9060, + "TP": 3044, + "n_pred": 3436, + "n_ref": 3348 + }, + "3": { + "Dice": 0.9742652657225521, + "FN": 152, + "FP": 186, + "IoU": 0.9498218527315915, + "TN": 6064, + "TP": 6398, + "n_pred": 6584, + "n_ref": 6550 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7967237527922562, + "FN": 466, + "FP": 80, + "IoU": 0.6621287128712872, + "TN": 23984, + "TP": 1070, + "n_pred": 1150, + "n_ref": 1536 + }, + "2": { + "Dice": 0.8259124087591241, + "FN": 127, + "FP": 827, + "IoU": 0.7034504196456326, + "TN": 22383, + "TP": 2263, + "n_pred": 3090, + "n_ref": 2390 + }, + "3": { + "Dice": 0.958147439983004, + "FN": 356, + "FP": 38, + "IoU": 0.9196574225122349, + "TN": 20696, + "TP": 4510, + "n_pred": 4548, + "n_ref": 4866 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.98, + "FN": 64, + "FP": 40, + "IoU": 0.9607843137254902, + "TN": 3748, + "TP": 2548, + "n_pred": 2588, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9455875628715135, + "FN": 30, + "FP": 89, + "IoU": 0.8967909800520382, + "TN": 5247, + "TP": 1034, + "n_pred": 1123, + "n_ref": 1064 + }, + "3": { + "Dice": 0.98688, + "FN": 24, + "FP": 17, + "IoU": 0.9740998104864181, + "TN": 4817, + "TP": 1542, + "n_pred": 1559, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7786259541984732, + "FN": 13, + "FP": 16, + "IoU": 0.6375, + "TN": 6320, + "TP": 51, + "n_pred": 67, + "n_ref": 64 + }, + "2": { + "Dice": 0.9052242256125751, + "FN": 93, + "FP": 112, + "IoU": 0.8268581081081081, + "TN": 5216, + "TP": 979, + "n_pred": 1091, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9763969171483622, + "FN": 27, + "FP": 71, + "IoU": 0.9538823529411765, + "TN": 4275, + "TP": 2027, + "n_pred": 2098, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9270044900577293, + "FN": 501, + "FP": 68, + "IoU": 0.8639406982305117, + "TN": 8618, + "TP": 3613, + "n_pred": 3681, + "n_ref": 4114 + }, + "2": { + "Dice": 0.9379968203497615, + "FN": 85, + "FP": 32, + "IoU": 0.8832335329341318, + "TN": 11798, + "TP": 885, + "n_pred": 917, + "n_ref": 970 + }, + "3": { + "Dice": 0.9653846153846154, + "FN": 11, + "FP": 43, + "IoU": 0.9330855018587361, + "TN": 11993, + "TP": 753, + "n_pred": 796, + "n_ref": 764 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9050729370781624, + "FN": 823, + "FP": 49, + "IoU": 0.8266056870153112, + "TN": 1371, + "TP": 4157, + "n_pred": 4206, + "n_ref": 4980 + }, + "2": { + "Dice": 0.9138576779026217, + "FN": 52, + "FP": 17, + "IoU": 0.8413793103448276, + "TN": 5965, + "TP": 366, + "n_pred": 383, + "n_ref": 418 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9187339606501284, + "FN": 106, + "FP": 274, + "IoU": 0.8496835443037974, + "TN": 16672, + "TP": 2148, + "n_pred": 2422, + "n_ref": 2254 + }, + "2": { + "Dice": 0.896969696969697, + "FN": 432, + "FP": 384, + "IoU": 0.8131868131868132, + "TN": 14832, + "TP": 3552, + "n_pred": 3936, + "n_ref": 3984 + }, + "3": { + "Dice": 0.9456375838926174, + "FN": 97, + "FP": 65, + "IoU": 0.8968809675366008, + "TN": 17629, + "TP": 1409, + "n_pred": 1474, + "n_ref": 1506 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8413793103448276, + "FN": 580, + "FP": 938, + "IoU": 0.7261904761904762, + "TN": 7256, + "TP": 4026, + "n_pred": 4964, + "n_ref": 4606 + }, + "2": { + "Dice": 0.8318085855031668, + "FN": 243, + "FP": 235, + "IoU": 0.7120481927710843, + "TN": 11140, + "TP": 1182, + "n_pred": 1417, + "n_ref": 1425 + }, + "3": { + "Dice": 0.9382398353062275, + "FN": 31, + "FP": 209, + "IoU": 0.883664566165778, + "TN": 10737, + "TP": 1823, + "n_pred": 2032, + "n_ref": 1854 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3859286083807553, + "FN": 1177, + "FP": 10, + "IoU": 0.2391025641025641, + "TN": 11240, + "TP": 373, + "n_pred": 383, + "n_ref": 1550 + }, + "2": { + "Dice": 0.8896257697773567, + "FN": 134, + "FP": 99, + "IoU": 0.8011945392491467, + "TN": 11628, + "TP": 939, + "n_pred": 1038, + "n_ref": 1073 + }, + "3": { + "Dice": 0.9193881769326168, + "FN": 169, + "FP": 26, + "IoU": 0.8508033664881408, + "TN": 11493, + "TP": 1112, + "n_pred": 1138, + "n_ref": 1281 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9448818897637795, + "FN": 300, + "FP": 246, + "IoU": 0.8955223880597015, + "TN": 13974, + "TP": 4680, + "n_pred": 4926, + "n_ref": 4980 + }, + "2": { + "Dice": 0.7387717690192483, + "FN": 292, + "FP": 278, + "IoU": 0.5857558139534884, + "TN": 17824, + "TP": 806, + "n_pred": 1084, + "n_ref": 1098 + }, + "3": { + "Dice": 0.9325879644853666, + "FN": 156, + "FP": 49, + "IoU": 0.8736906962415281, + "TN": 17577, + "TP": 1418, + "n_pred": 1467, + "n_ref": 1574 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9603323658300609, + "FN": 499, + "FP": 198, + "IoU": 0.9236917013356689, + "TN": 10066, + "TP": 8437, + "n_pred": 8635, + "n_ref": 8936 + }, + "2": { + "Dice": 0.9034459228932105, + "FN": 186, + "FP": 97, + "IoU": 0.8238954573739888, + "TN": 17593, + "TP": 1324, + "n_pred": 1421, + "n_ref": 1510 + }, + "3": { + "Dice": 0.930323846908734, + "FN": 91, + "FP": 51, + "IoU": 0.8697247706422019, + "TN": 18110, + "TP": 948, + "n_pred": 999, + "n_ref": 1039 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8519982630568191, + "FN": 237.33333333333334, + "FP": 305.8452380952381, + "IoU": 0.7750093458347687, + "TN": 13918.92857142857, + "TP": 1766.4642857142856, + "n_pred": 2072.3095238095234, + "n_ref": 2003.797619047619 + }, + "mean": { + "1": { + "Dice": 0.8354722660533156, + "FN": 479.17857142857144, + "FP": 239.42857142857142, + "IoU": 0.7494634565330719, + "TN": 13271.107142857143, + "TP": 2238.8571428571427, + "n_pred": 2478.285714285714, + "n_ref": 2718.035714285714 + }, + "2": { + "Dice": 0.8302689682587332, + "FN": 174.75, + "FP": 252.07142857142858, + "IoU": 0.7405708226515867, + "TN": 14510.142857142857, + "TP": 1291.607142857143, + "n_pred": 1543.6785714285713, + "n_ref": 1466.357142857143 + }, + "3": { + "Dice": 0.8902535548584088, + "FN": 58.07142857142857, + "FP": 426.0357142857143, + "IoU": 0.8349937583196475, + "TN": 13975.535714285714, + "TP": 1768.9285714285713, + "n_pred": 2194.964285714286, + "n_ref": 1827.0 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7068106312292359, + "FN": 51, + "FP": 655, + "IoU": 0.5465639049454079, + "TN": 11243, + "TP": 851, + "n_pred": 1506, + "n_ref": 902 + }, + "2": { + "Dice": 0.8936170212765957, + "FN": 55, + "FP": 140, + "IoU": 0.8076923076923077, + "TN": 11786, + "TP": 819, + "n_pred": 959, + "n_ref": 874 + }, + "3": { + "Dice": 0.9440504334121356, + "FN": 67, + "FP": 4, + "IoU": 0.8940298507462686, + "TN": 12130, + "TP": 599, + "n_pred": 603, + "n_ref": 666 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.932475884244373, + "FN": 54, + "FP": 30, + "IoU": 0.8734939759036144, + "TN": 5736, + "TP": 580, + "n_pred": 610, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7665219488663773, + "FN": 4127, + "FP": 713, + "IoU": 0.6214313648807196, + "TN": 51215, + "TP": 7945, + "n_pred": 8658, + "n_ref": 12072 + }, + "2": { + "Dice": 0.7858266259598483, + "FN": 882, + "FP": 1433, + "IoU": 0.6472112160926546, + "TN": 57438, + "TP": 4247, + "n_pred": 5680, + "n_ref": 5129 + }, + "3": { + "Dice": 0.8701837064188157, + "FN": 238, + "FP": 2737, + "IoU": 0.7701992893557855, + "TN": 51054, + "TP": 9971, + "n_pred": 12708, + "n_ref": 10209 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9483889364128885, + "FN": 39, + "FP": 142, + "IoU": 0.9018438177874186, + "TN": 4556, + "TP": 1663, + "n_pred": 1805, + "n_ref": 1702 + }, + "2": { + "Dice": 0.905448717948718, + "FN": 63, + "FP": 55, + "IoU": 0.8272327964860908, + "TN": 5717, + "TP": 565, + "n_pred": 620, + "n_ref": 628 + }, + "3": { + "Dice": 0.9732664995822891, + "FN": 5, + "FP": 59, + "IoU": 0.9479251423921887, + "TN": 5171, + "TP": 1165, + "n_pred": 1224, + "n_ref": 1170 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.679563749675409, + "FN": 2429, + "FP": 39, + "IoU": 0.5146509341199607, + "TN": 26915, + "TP": 2617, + "n_pred": 2656, + "n_ref": 5046 + }, + "2": { + "Dice": 0.8756873057614153, + "FN": 333, + "FP": 707, + "IoU": 0.7788645545396555, + "TN": 27297, + "TP": 3663, + "n_pred": 4370, + "n_ref": 3996 + }, + "3": { + "Dice": 0.9743862762496303, + "FN": 254, + "FP": 179, + "IoU": 0.9500519091013958, + "TN": 23331, + "TP": 8236, + "n_pred": 8415, + "n_ref": 8490 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9185508511567001, + "FN": 759, + "FP": 174, + "IoU": 0.8493703584113659, + "TN": 13006, + "TP": 5261, + "n_pred": 5435, + "n_ref": 6020 + }, + "2": { + "Dice": 0.9, + "FN": 149, + "FP": 153, + "IoU": 0.8181818181818182, + "TN": 17539, + "TP": 1359, + "n_pred": 1512, + "n_ref": 1508 + }, + "3": { + "Dice": 0.9723157500935279, + "FN": 45, + "FP": 103, + "IoU": 0.9461230433199854, + "TN": 16453, + "TP": 2599, + "n_pred": 2702, + "n_ref": 2644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9866944951734934, + "FN": 42, + "FP": 60, + "IoU": 0.9737384140061792, + "TN": 8916, + "TP": 3782, + "n_pred": 3842, + "n_ref": 3824 + }, + "2": { + "Dice": 0.9166898857620507, + "FN": 232, + "FP": 67, + "IoU": 0.8461934156378601, + "TN": 10856, + "TP": 1645, + "n_pred": 1712, + "n_ref": 1877 + }, + "3": { + "Dice": 0.9802005012531328, + "FN": 15, + "FP": 143, + "IoU": 0.9611698205947408, + "TN": 8731, + "TP": 3911, + "n_pred": 4054, + "n_ref": 3926 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9751943724546465, + "FN": 53, + "FP": 14, + "IoU": 0.9515895953757225, + "TN": 11416, + "TP": 1317, + "n_pred": 1331, + "n_ref": 1370 + }, + "2": { + "Dice": 0.887881286067601, + "FN": 161, + "FP": 111, + "IoU": 0.7983691623424759, + "TN": 11451, + "TP": 1077, + "n_pred": 1188, + "n_ref": 1238 + }, + "3": { + "Dice": 0.9731022115959355, + "FN": 56, + "FP": 34, + "IoU": 0.9476135040745053, + "TN": 11082, + "TP": 1628, + "n_pred": 1662, + "n_ref": 1684 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5604013894249325, + "FN": 62, + "FP": 1077, + "IoU": 0.3892761394101877, + "TN": 23735, + "TP": 726, + "n_pred": 1803, + "n_ref": 788 + }, + "2": { + "Dice": 0.8960013030377066, + "FN": 869, + "FP": 408, + "IoU": 0.8115963411035704, + "TN": 18822, + "TP": 5501, + "n_pred": 5909, + "n_ref": 6370 + }, + "3": { + "Dice": 0.9029336483559756, + "FN": 195, + "FP": 298, + "IoU": 0.8230437903804738, + "TN": 22814, + "TP": 2293, + "n_pred": 2591, + "n_ref": 2488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.975718671504326, + "FN": 52, + "FP": 122, + "IoU": 0.9525885558583106, + "TN": 9130, + "TP": 3496, + "n_pred": 3618, + "n_ref": 3548 + }, + "2": { + "Dice": 0.9214195183776933, + "FN": 67, + "FP": 57, + "IoU": 0.854289071680376, + "TN": 11949, + "TP": 727, + "n_pred": 784, + "n_ref": 794 + }, + "3": { + "Dice": 0.9710312862108922, + "FN": 46, + "FP": 4, + "IoU": 0.9436936936936937, + "TN": 11912, + "TP": 838, + "n_pred": 842, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9423423423423424, + "FN": 49, + "FP": 15, + "IoU": 0.8909710391822828, + "TN": 5813, + "TP": 523, + "n_pred": 538, + "n_ref": 572 + }, + "2": { + "Dice": 0.9363389689000209, + "FN": 279, + "FP": 26, + "IoU": 0.880298273155416, + "TN": 3852, + "TP": 2243, + "n_pred": 2269, + "n_ref": 2522 + }, + "3": { + "Dice": 0.9557273366127899, + "FN": 6, + "FP": 120, + "IoU": 0.9152086137281292, + "TN": 4914, + "TP": 1360, + "n_pred": 1480, + "n_ref": 1366 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.25020576131687244, + "FN": 0, + "FP": 911, + "IoU": 0.14299153339604892, + "TN": 5337, + "TP": 152, + "n_pred": 1063, + "n_ref": 152 + }, + "2": { + "Dice": 0.8897196261682243, + "FN": 58, + "FP": 60, + "IoU": 0.8013468013468014, + "TN": 5806, + "TP": 476, + "n_pred": 536, + "n_ref": 534 + }, + "3": { + "Dice": 0.9266862170087976, + "FN": 2, + "FP": 48, + "IoU": 0.8633879781420765, + "TN": 6034, + "TP": 316, + "n_pred": 364, + "n_ref": 318 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7790143084260731, + "FN": 236, + "FP": 42, + "IoU": 0.6380208333333334, + "TN": 5632, + "TP": 490, + "n_pred": 532, + "n_ref": 726 + }, + "2": { + "Dice": 0.8249201277955271, + "FN": 229, + "FP": 319, + "IoU": 0.7020119630233823, + "TN": 4561, + "TP": 1291, + "n_pred": 1610, + "n_ref": 1520 + }, + "3": { + "Dice": 0.9513264129181084, + "FN": 180, + "FP": 31, + "IoU": 0.9071711394632644, + "TN": 4127, + "TP": 2062, + "n_pred": 2093, + "n_ref": 2242 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9274092615769712, + "FN": 41, + "FP": 75, + "IoU": 0.8646441073512252, + "TN": 5543, + "TP": 741, + "n_pred": 816, + "n_ref": 782 + }, + "3": { + "Dice": 0.9863663307646711, + "FN": 19, + "FP": 27, + "IoU": 0.9730994152046784, + "TN": 4690, + "TP": 1664, + "n_pred": 1691, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9318849089841457, + "FN": 37, + "FP": 195, + "IoU": 0.8724573941726224, + "TN": 10981, + "TP": 1587, + "n_pred": 1782, + "n_ref": 1624 + }, + "2": { + "Dice": 0.8991477272727273, + "FN": 129, + "FP": 13, + "IoU": 0.8167741935483871, + "TN": 12025, + "TP": 633, + "n_pred": 646, + "n_ref": 762 + }, + "3": { + "Dice": 0.9423835832675612, + "FN": 47, + "FP": 26, + "IoU": 0.891044776119403, + "TN": 12130, + "TP": 597, + "n_pred": 623, + "n_ref": 644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9787988850409663, + "FN": 150, + "FP": 101, + "IoU": 0.9584780810587262, + "TN": 13155, + "TP": 5794, + "n_pred": 5895, + "n_ref": 5944 + }, + "2": { + "Dice": 0.8871983210912907, + "FN": 225, + "FP": 205, + "IoU": 0.7972654408297972, + "TN": 17079, + "TP": 1691, + "n_pred": 1896, + "n_ref": 1916 + }, + "3": { + "Dice": 0.9622805492786373, + "FN": 47, + "FP": 170, + "IoU": 0.9273031825795645, + "TN": 16215, + "TP": 2768, + "n_pred": 2938, + "n_ref": 2815 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9370409233997902, + "FN": 76, + "FP": 44, + "IoU": 0.8815399802566634, + "TN": 5387, + "TP": 893, + "n_pred": 937, + "n_ref": 969 + }, + "3": { + "Dice": 0.9791437980241493, + "FN": 27, + "FP": 30, + "IoU": 0.9591397849462365, + "TN": 5005, + "TP": 1338, + "n_pred": 1368, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9699143905421932, + "FN": 235, + "FP": 134, + "IoU": 0.941586195979104, + "TN": 6483, + "TP": 5948, + "n_pred": 6082, + "n_ref": 6183 + }, + "2": { + "Dice": 0.931045050566963, + "FN": 132, + "FP": 93, + "IoU": 0.8709862385321101, + "TN": 11056, + "TP": 1519, + "n_pred": 1612, + "n_ref": 1651 + }, + "3": { + "Dice": 0.9811512990320937, + "FN": 38, + "FP": 73, + "IoU": 0.963, + "TN": 9800, + "TP": 2889, + "n_pred": 2962, + "n_ref": 2927 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6266703786191536, + "FN": 2663, + "FP": 19, + "IoU": 0.45631461585242244, + "TN": 20667, + "TP": 2251, + "n_pred": 2270, + "n_ref": 4914 + }, + "2": { + "Dice": 0.908829863603733, + "FN": 67, + "FP": 60, + "IoU": 0.8328947368421052, + "TN": 24840, + "TP": 633, + "n_pred": 693, + "n_ref": 700 + }, + "3": { + "Dice": 0.9148264984227129, + "FN": 15, + "FP": 12, + "IoU": 0.8430232558139535, + "TN": 25428, + "TP": 145, + "n_pred": 157, + "n_ref": 160 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9561347743165926, + "FN": 12, + "FP": 57, + "IoU": 0.9159561510353228, + "TN": 5579, + "TP": 752, + "n_pred": 809, + "n_ref": 764 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 14, + "IoU": 0.0, + "TN": 6386, + "TP": 0, + "n_pred": 14, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8968102411768867, + "FN": 864, + "FP": 595, + "IoU": 0.8129247339402488, + "TN": 11401, + "TP": 6340, + "n_pred": 6935, + "n_ref": 7204 + }, + "2": { + "Dice": 0.8039800995024876, + "FN": 250, + "FP": 144, + "IoU": 0.6722129783693843, + "TN": 17998, + "TP": 808, + "n_pred": 952, + "n_ref": 1058 + }, + "3": { + "Dice": 0.9283387622149837, + "FN": 99, + "FP": 33, + "IoU": 0.8662613981762918, + "TN": 18213, + "TP": 855, + "n_pred": 888, + "n_ref": 954 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.863441518677281, + "FN": 714, + "FP": 178, + "IoU": 0.759698275862069, + "TN": 9088, + "TP": 2820, + "n_pred": 2998, + "n_ref": 3534 + }, + "2": { + "Dice": 0.830820770519263, + "FN": 184, + "FP": 119, + "IoU": 0.7106017191977078, + "TN": 11753, + "TP": 744, + "n_pred": 863, + "n_ref": 928 + }, + "3": { + "Dice": 0.9150052465897167, + "FN": 74, + "FP": 7, + "IoU": 0.8433268858800773, + "TN": 12283, + "TP": 436, + "n_pred": 443, + "n_ref": 510 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9437185929648241, + "FN": 85, + "FP": 251, + "IoU": 0.8934348239771646, + "TN": 9647, + "TP": 2817, + "n_pred": 3068, + "n_ref": 2902 + }, + "2": { + "Dice": 0.8959415272167724, + "FN": 255, + "FP": 286, + "IoU": 0.8114982578397213, + "TN": 9930, + "TP": 2329, + "n_pred": 2615, + "n_ref": 2584 + }, + "3": { + "Dice": 0.9549356223175965, + "FN": 72, + "FP": 96, + "IoU": 0.9137577002053389, + "TN": 10852, + "TP": 1780, + "n_pred": 1876, + "n_ref": 1852 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.739277108433735, + "FN": 346, + "FP": 736, + "IoU": 0.5863914373088684, + "TN": 3784, + "TP": 1534, + "n_pred": 2270, + "n_ref": 1880 + }, + "2": { + "Dice": 0.898406374501992, + "FN": 17, + "FP": 85, + "IoU": 0.8155515370705244, + "TN": 5847, + "TP": 451, + "n_pred": 536, + "n_ref": 468 + }, + "3": { + "Dice": 0.7436619718309859, + "FN": 11, + "FP": 171, + "IoU": 0.5919282511210763, + "TN": 5954, + "TP": 264, + "n_pred": 435, + "n_ref": 275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9666274047899489, + "FN": 96, + "FP": 74, + "IoU": 0.9354103343465046, + "TN": 29368, + "TP": 2462, + "n_pred": 2536, + "n_ref": 2558 + }, + "2": { + "Dice": 0.5353817504655494, + "FN": 67, + "FP": 931, + "IoU": 0.36554354736172917, + "TN": 30427, + "TP": 575, + "n_pred": 1506, + "n_ref": 642 + }, + "3": { + "Dice": 0.3678004535147392, + "FN": 47, + "FP": 2741, + "IoU": 0.22534037232564602, + "TN": 28401, + "TP": 811, + "n_pred": 3552, + "n_ref": 858 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7561728395061729, + "FN": 262, + "FP": 370, + "IoU": 0.607940446650124, + "TN": 36788, + "TP": 980, + "n_pred": 1350, + "n_ref": 1242 + }, + "2": { + "Dice": 0.6679721496953873, + "FN": 73, + "FP": 1453, + "IoU": 0.5014701078079059, + "TN": 35339, + "TP": 1535, + "n_pred": 2988, + "n_ref": 1608 + }, + "3": { + "Dice": 0.29498092163193423, + "FN": 21, + "FP": 4783, + "IoU": 0.17300740230676537, + "TN": 32591, + "TP": 1005, + "n_pred": 5788, + "n_ref": 1026 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8575780435967828, + "FN": 420.35714285714283, + "FP": 302.9642857142857, + "IoU": 0.7751520083671003, + "TN": 15886.67857142857, + "TP": 2361.428571428571, + "n_pred": 2664.3928571428573, + "n_ref": 2781.785714285714 + }, + "mean": { + "1": { + "Dice": 0.7890978100285462, + "FN": 382.35714285714283, + "FP": 477.60714285714283, + "IoU": 0.7008366112400864, + "TN": 15606.67857142857, + "TP": 2504.785714285714, + "n_pred": 2982.3928571428573, + "n_ref": 2887.1428571428573 + }, + "2": { + "Dice": 0.8683395168303001, + "FN": 413.17857142857144, + "FP": 272.32142857142856, + "IoU": 0.7738531413146327, + "TN": 16316.32142857143, + "TP": 1969.607142857143, + "n_pred": 2241.9285714285716, + "n_ref": 2382.785714285714 + }, + "3": { + "Dice": 0.9152968039315023, + "FN": 465.5357142857143, + "FP": 158.96428571428572, + "IoU": 0.8507662725465818, + "TN": 15737.035714285714, + "TP": 2609.8928571428573, + "n_pred": 2768.8571428571427, + "n_ref": 3075.4285714285716 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6293646003965859, + "FN": 166, + "FP": 4133, + "IoU": 0.459177255000629, + "TN": 30451, + "TP": 3650, + "n_pred": 7783, + "n_ref": 3816 + }, + "2": { + "Dice": 0.8533211386761175, + "FN": 267, + "FP": 1016, + "IoU": 0.7441674975074776, + "TN": 33385, + "TP": 3732, + "n_pred": 4748, + "n_ref": 3999 + }, + "3": { + "Dice": 0.9553643650268402, + "FN": 476, + "FP": 131, + "IoU": 0.91454315078136, + "TN": 31297, + "TP": 6496, + "n_pred": 6627, + "n_ref": 6972 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9601174455590898, + "FN": 294, + "FP": 32, + "IoU": 0.9232941176470588, + "TN": 14950, + "TP": 3924, + "n_pred": 3956, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8696532523411794, + "FN": 188, + "FP": 327, + "IoU": 0.7693685624720108, + "TN": 16967, + "TP": 1718, + "n_pred": 2045, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9216467463479415, + "FN": 179, + "FP": 116, + "IoU": 0.854679802955665, + "TN": 17170, + "TP": 1735, + "n_pred": 1851, + "n_ref": 1914 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9240323832760342, + "FN": 108, + "FP": 577, + "IoU": 0.8587920016491445, + "TN": 39949, + "TP": 4166, + "n_pred": 4743, + "n_ref": 4274 + }, + "2": { + "Dice": 0.8571761145384705, + "FN": 702, + "FP": 525, + "IoU": 0.7500509268690161, + "TN": 39891, + "TP": 3682, + "n_pred": 4207, + "n_ref": 4384 + }, + "3": { + "Dice": 0.9791701198961269, + "FN": 287, + "FP": 90, + "IoU": 0.9591903009309374, + "TN": 35562, + "TP": 8861, + "n_pred": 8951, + "n_ref": 9148 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8392995505966218, + "FN": 1966, + "FP": 108, + "IoU": 0.7230974632843792, + "TN": 37310, + "TP": 5416, + "n_pred": 5524, + "n_ref": 7382 + }, + "2": { + "Dice": 0.7557312252964427, + "FN": 1716, + "FP": 1374, + "IoU": 0.6073697585768743, + "TN": 36930, + "TP": 4780, + "n_pred": 6154, + "n_ref": 6496 + }, + "3": { + "Dice": 0.8335170893054025, + "FN": 4378, + "FP": 756, + "IoU": 0.7145557655954632, + "TN": 26814, + "TP": 12852, + "n_pred": 13608, + "n_ref": 17230 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.700626959247649, + "FN": 1617, + "FP": 293, + "IoU": 0.5392038600723763, + "TN": 27855, + "TP": 2235, + "n_pred": 2528, + "n_ref": 3852 + }, + "2": { + "Dice": 0.7348846661924601, + "FN": 1859, + "FP": 750, + "IoU": 0.5808835341365461, + "TN": 25775, + "TP": 3616, + "n_pred": 4366, + "n_ref": 5475 + }, + "3": { + "Dice": 0.7769792579608531, + "FN": 3292, + "FP": 525, + "IoU": 0.6352952417351424, + "TN": 21534, + "TP": 6649, + "n_pred": 7174, + "n_ref": 9941 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9482210601866092, + "FN": 259, + "FP": 246, + "IoU": 0.9015402612595048, + "TN": 7671, + "TP": 4624, + "n_pred": 4870, + "n_ref": 4883 + }, + "2": { + "Dice": 0.8983818770226537, + "FN": 151, + "FP": 163, + "IoU": 0.8155111633372503, + "TN": 11098, + "TP": 1388, + "n_pred": 1551, + "n_ref": 1539 + }, + "3": { + "Dice": 0.9772994129158513, + "FN": 79, + "FP": 37, + "IoU": 0.9556065824722542, + "TN": 10187, + "TP": 2497, + "n_pred": 2534, + "n_ref": 2576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9375582479030755, + "FN": 102, + "FP": 32, + "IoU": 0.8824561403508772, + "TN": 24460, + "TP": 1006, + "n_pred": 1038, + "n_ref": 1108 + }, + "2": { + "Dice": 0.945464219207236, + "FN": 256, + "FP": 154, + "IoU": 0.8965691220988901, + "TN": 21636, + "TP": 3554, + "n_pred": 3708, + "n_ref": 3810 + }, + "3": { + "Dice": 0.9269965703086722, + "FN": 112, + "FP": 37, + "IoU": 0.8639269406392694, + "TN": 24505, + "TP": 946, + "n_pred": 983, + "n_ref": 1058 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 12798, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + }, + "2": { + "Dice": 0.9295665634674922, + "FN": 97, + "FP": 85, + "IoU": 0.8684020245842372, + "TN": 11417, + "TP": 1201, + "n_pred": 1286, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9841269841269841, + "FN": 82, + "FP": 22, + "IoU": 0.96875, + "TN": 9472, + "TP": 3224, + "n_pred": 3246, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.701912858660999, + "FN": 973, + "FP": 149, + "IoU": 0.5407286123618502, + "TN": 16757, + "TP": 1321, + "n_pred": 1470, + "n_ref": 2294 + }, + "2": { + "Dice": 0.9601910828025477, + "FN": 85, + "FP": 65, + "IoU": 0.9234303215926493, + "TN": 17241, + "TP": 1809, + "n_pred": 1874, + "n_ref": 1894 + }, + "3": { + "Dice": 0.9527085124677558, + "FN": 24, + "FP": 31, + "IoU": 0.909688013136289, + "TN": 18591, + "TP": 554, + "n_pred": 585, + "n_ref": 578 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 115, + "IoU": 0.0, + "TN": 31885, + "TP": 0, + "n_pred": 115, + "n_ref": 0 + }, + "2": { + "Dice": 0.9438586491878028, + "FN": 90, + "FP": 107, + "IoU": 0.8936859147328656, + "TN": 30147, + "TP": 1656, + "n_pred": 1763, + "n_ref": 1746 + }, + "3": { + "Dice": 0.9707602339181286, + "FN": 2, + "FP": 28, + "IoU": 0.9431818181818182, + "TN": 31472, + "TP": 498, + "n_pred": 526, + "n_ref": 500 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9199689199689199, + "FN": 61, + "FP": 42, + "IoU": 0.8517985611510791, + "TN": 18505, + "TP": 592, + "n_pred": 634, + "n_ref": 653 + }, + "2": { + "Dice": 0.9141138464966024, + "FN": 342, + "FP": 429, + "IoU": 0.8418137053754616, + "TN": 14326, + "TP": 4103, + "n_pred": 4532, + "n_ref": 4445 + }, + "3": { + "Dice": 0.791537025513379, + "FN": 168, + "FP": 167, + "IoU": 0.654994850669413, + "TN": 18229, + "TP": 636, + "n_pred": 803, + "n_ref": 804 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8577770189516818, + "FN": 728, + "FP": 105, + "IoU": 0.7509715994020927, + "TN": 15855, + "TP": 2512, + "n_pred": 2617, + "n_ref": 3240 + }, + "2": { + "Dice": 0.9009613234965348, + "FN": 760, + "FP": 126, + "IoU": 0.8197721724979659, + "TN": 14284, + "TP": 4030, + "n_pred": 4156, + "n_ref": 4790 + }, + "3": { + "Dice": 0.9507954125046245, + "FN": 134, + "FP": 132, + "IoU": 0.9062059238363893, + "TN": 16364, + "TP": 2570, + "n_pred": 2702, + "n_ref": 2704 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6114618746964546, + "FN": 199, + "FP": 1401, + "IoU": 0.4403637635536901, + "TN": 16341, + "TP": 1259, + "n_pred": 2660, + "n_ref": 1458 + }, + "2": { + "Dice": 0.8180946291560103, + "FN": 897, + "FP": 241, + "IoU": 0.692182850960238, + "TN": 15503, + "TP": 2559, + "n_pred": 2800, + "n_ref": 3456 + }, + "3": { + "Dice": 0.8005902192242833, + "FN": 37, + "FP": 909, + "IoU": 0.6674868189806679, + "TN": 16355, + "TP": 1899, + "n_pred": 2808, + "n_ref": 1936 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.770133164235891, + "FN": 1419, + "FP": 31, + "IoU": 0.6261923176076308, + "TN": 2521, + "TP": 2429, + "n_pred": 2460, + "n_ref": 3848 + }, + "2": { + "Dice": 0.8132578819725141, + "FN": 78, + "FP": 153, + "IoU": 0.6852861035422343, + "TN": 5666, + "TP": 503, + "n_pred": 656, + "n_ref": 581 + }, + "3": { + "Dice": 0.9522373051784816, + "FN": 86, + "FP": 9, + "IoU": 0.9088291746641075, + "TN": 5358, + "TP": 947, + "n_pred": 956, + "n_ref": 1033 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9694803409403354, + "FN": 168, + "FP": 54, + "IoU": 0.9407684098185699, + "TN": 9052, + "TP": 3526, + "n_pred": 3580, + "n_ref": 3694 + }, + "2": { + "Dice": 0.9396325459317585, + "FN": 26, + "FP": 66, + "IoU": 0.8861386138613861, + "TN": 11992, + "TP": 716, + "n_pred": 782, + "n_ref": 742 + }, + "3": { + "Dice": 0.9824753559693319, + "FN": 11, + "FP": 21, + "IoU": 0.9655543595263725, + "TN": 11871, + "TP": 897, + "n_pred": 918, + "n_ref": 908 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.33243606998654107, + "FN": 991, + "FP": 1, + "IoU": 0.1993543179983858, + "TN": 5161, + "TP": 247, + "n_pred": 248, + "n_ref": 1238 + }, + "2": { + "Dice": 0.8952461085401767, + "FN": 146, + "FP": 103, + "IoU": 0.8103579588728104, + "TN": 5087, + "TP": 1064, + "n_pred": 1167, + "n_ref": 1210 + }, + "3": { + "Dice": 0.9248374512353706, + "FN": 264, + "FP": 25, + "IoU": 0.8601838413159167, + "TN": 4333, + "TP": 1778, + "n_pred": 1803, + "n_ref": 2042 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7929961089494163, + "FN": 142, + "FP": 1986, + "IoU": 0.6569954867827208, + "TN": 12996, + "TP": 4076, + "n_pred": 6062, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8953191489361703, + "FN": 309, + "FP": 183, + "IoU": 0.810477657935285, + "TN": 16604, + "TP": 2104, + "n_pred": 2287, + "n_ref": 2413 + }, + "3": { + "Dice": 0.9761292691883952, + "FN": 118, + "FP": 77, + "IoU": 0.9533715925394548, + "TN": 15018, + "TP": 3987, + "n_pred": 4064, + "n_ref": 4105 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.835742444152431, + "FN": 92, + "FP": 33, + "IoU": 0.7178329571106095, + "TN": 5957, + "TP": 318, + "n_pred": 351, + "n_ref": 410 + }, + "3": { + "Dice": 0.9681717246484086, + "FN": 26, + "FP": 17, + "IoU": 0.9383070301291249, + "TN": 5703, + "TP": 654, + "n_pred": 671, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8317234367056431, + "FN": 158, + "FP": 173, + "IoU": 0.7119234116623151, + "TN": 11651, + "TP": 818, + "n_pred": 991, + "n_ref": 976 + }, + "2": { + "Dice": 0.851994169868822, + "FN": 905, + "FP": 212, + "IoU": 0.7421514312096029, + "TN": 8468, + "TP": 3215, + "n_pred": 3427, + "n_ref": 4120 + }, + "3": { + "Dice": 0.9051833122629582, + "FN": 348, + "FP": 27, + "IoU": 0.8267898383371824, + "TN": 10635, + "TP": 1790, + "n_pred": 1817, + "n_ref": 2138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9092531984528415, + "FN": 48, + "FP": 257, + "IoU": 0.8336061102018549, + "TN": 10967, + "TP": 1528, + "n_pred": 1785, + "n_ref": 1576 + }, + "2": { + "Dice": 0.9533861037818822, + "FN": 84, + "FP": 22, + "IoU": 0.9109243697478991, + "TN": 11610, + "TP": 1084, + "n_pred": 1106, + "n_ref": 1168 + }, + "3": { + "Dice": 0.9735327963176065, + "FN": 12, + "FP": 34, + "IoU": 0.9484304932735426, + "TN": 11908, + "TP": 846, + "n_pred": 880, + "n_ref": 858 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7712736113708621, + "FN": 294, + "FP": 2152, + "IoU": 0.6277016742770167, + "TN": 19030, + "TP": 4124, + "n_pred": 6276, + "n_ref": 4418 + }, + "2": { + "Dice": 0.7524681385747621, + "FN": 1104, + "FP": 275, + "IoU": 0.6031654676258993, + "TN": 22125, + "TP": 2096, + "n_pred": 2371, + "n_ref": 3200 + }, + "3": { + "Dice": 0.8507377516915301, + "FN": 1672, + "FP": 159, + "IoU": 0.7402468435239041, + "TN": 18551, + "TP": 5218, + "n_pred": 5377, + "n_ref": 6890 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9666850727038468, + "FN": 238, + "FP": 124, + "IoU": 0.9355183469896687, + "TN": 19986, + "TP": 5252, + "n_pred": 5376, + "n_ref": 5490 + }, + "2": { + "Dice": 0.7134502923976608, + "FN": 695, + "FP": 236, + "IoU": 0.5545454545454546, + "TN": 23510, + "TP": 1159, + "n_pred": 1395, + "n_ref": 1854 + }, + "3": { + "Dice": 0.8078784843932566, + "FN": 1084, + "FP": 67, + "IoU": 0.6776813217586111, + "TN": 22029, + "TP": 2420, + "n_pred": 2487, + "n_ref": 3504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4361210877373012, + "FN": 190, + "FP": 909, + "IoU": 0.27887139107611547, + "TN": 11276, + "TP": 425, + "n_pred": 1334, + "n_ref": 615 + }, + "2": { + "Dice": 0.8312581913499345, + "FN": 415, + "FP": 615, + "IoU": 0.7112419400056069, + "TN": 9233, + "TP": 2537, + "n_pred": 3152, + "n_ref": 2952 + }, + "3": { + "Dice": 0.8426346528228423, + "FN": 83, + "FP": 887, + "IoU": 0.728062797869358, + "TN": 9233, + "TP": 2597, + "n_pred": 3484, + "n_ref": 2680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9737697810535443, + "FN": 74, + "FP": 47, + "IoU": 0.948880439374736, + "TN": 4033, + "TP": 2246, + "n_pred": 2293, + "n_ref": 2320 + }, + "2": { + "Dice": 0.9069069069069069, + "FN": 26, + "FP": 36, + "IoU": 0.8296703296703297, + "TN": 6036, + "TP": 302, + "n_pred": 338, + "n_ref": 328 + }, + "3": { + "Dice": 0.859375, + "FN": 16, + "FP": 2, + "IoU": 0.7534246575342466, + "TN": 6327, + "TP": 55, + "n_pred": 57, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9669172212380907, + "FN": 491, + "FP": 200, + "IoU": 0.9359532857540087, + "TN": 8411, + "TP": 10098, + "n_pred": 10298, + "n_ref": 10589 + }, + "2": { + "Dice": 0.8533834586466166, + "FN": 249, + "FP": 297, + "IoU": 0.7442622950819672, + "TN": 17065, + "TP": 1589, + "n_pred": 1886, + "n_ref": 1838 + }, + "3": { + "Dice": 0.9543910722950024, + "FN": 53, + "FP": 135, + "IoU": 0.9127610208816705, + "TN": 17045, + "TP": 1967, + "n_pred": 2102, + "n_ref": 2020 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9763152378956194, + "FN": 20, + "FP": 206, + "IoU": 0.9537264537264537, + "TN": 7916, + "TP": 4658, + "n_pred": 4864, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9533834586466166, + "FN": 30, + "FP": 32, + "IoU": 0.9109195402298851, + "TN": 12104, + "TP": 634, + "n_pred": 666, + "n_ref": 664 + }, + "3": { + "Dice": 0.9786407766990292, + "FN": 12, + "FP": 10, + "IoU": 0.9581749049429658, + "TN": 12274, + "TP": 504, + "n_pred": 514, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.8962914605170225, + "FN": 190.0, + "FP": 179.77380952380952, + "IoU": 0.8260167278317994, + "TN": 11576.297619047618, + "TP": 1768.2142857142856, + "n_pred": 1947.9880952380954, + "n_ref": 1958.2142857142856 + }, + "mean": { + "1": { + "Dice": 0.8421025728336977, + "FN": 312.07142857142856, + "FP": 316.39285714285717, + "IoU": 0.7534285574184607, + "TN": 10842.857142857143, + "TP": 2242.964285714286, + "n_pred": 2559.3571428571427, + "n_ref": 2555.035714285714 + }, + "2": { + "Dice": 0.8988089903872896, + "FN": 158.85714285714286, + "FP": 161.60714285714286, + "IoU": 0.8187488014844001, + "TN": 11999.42857142857, + "TP": 1394.392857142857, + "n_pred": 1556.0, + "n_ref": 1553.25 + }, + "3": { + "Dice": 0.9479628183300801, + "FN": 99.07142857142857, + "FP": 61.32142857142857, + "IoU": 0.9058728245925372, + "TN": 11886.607142857143, + "TP": 1667.2857142857142, + "n_pred": 1728.607142857143, + "n_ref": 1766.357142857143 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7647058823529411, + "FN": 3, + "FP": 5, + "IoU": 0.6190476190476191, + "TN": 6379, + "TP": 13, + "n_pred": 18, + "n_ref": 16 + }, + "2": { + "Dice": 0.8886486486486487, + "FN": 50, + "FP": 156, + "IoU": 0.7996108949416343, + "TN": 5372, + "TP": 822, + "n_pred": 978, + "n_ref": 872 + }, + "3": { + "Dice": 0.9730392156862745, + "FN": 123, + "FP": 9, + "IoU": 0.9474940334128878, + "TN": 3886, + "TP": 2382, + "n_pred": 2391, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.565602154674875, + "FN": 1101, + "FP": 28, + "IoU": 0.39431330472103004, + "TN": 17336, + "TP": 735, + "n_pred": 763, + "n_ref": 1836 + }, + "2": { + "Dice": 0.9119402985074627, + "FN": 286, + "FP": 186, + "IoU": 0.8381344307270233, + "TN": 16284, + "TP": 2444, + "n_pred": 2630, + "n_ref": 2730 + }, + "3": { + "Dice": 0.9475958941112912, + "FN": 124, + "FP": 70, + "IoU": 0.9004106776180698, + "TN": 17252, + "TP": 1754, + "n_pred": 1824, + "n_ref": 1878 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9312587087784486, + "FN": 225, + "FP": 71, + "IoU": 0.8713602781399391, + "TN": 10499, + "TP": 2005, + "n_pred": 2076, + "n_ref": 2230 + }, + "2": { + "Dice": 0.8699569936514437, + "FN": 246, + "FP": 389, + "IoU": 0.7698441464298659, + "TN": 10041, + "TP": 2124, + "n_pred": 2513, + "n_ref": 2370 + }, + "3": { + "Dice": 0.9626522867984821, + "FN": 124, + "FP": 63, + "IoU": 0.927993839045052, + "TN": 10203, + "TP": 2410, + "n_pred": 2473, + "n_ref": 2534 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8439395233620911, + "FN": 68, + "FP": 1759, + "IoU": 0.7300132998374464, + "TN": 6033, + "TP": 4940, + "n_pred": 6699, + "n_ref": 5008 + }, + "2": { + "Dice": 0.910941475826972, + "FN": 106, + "FP": 174, + "IoU": 0.8364485981308412, + "TN": 11088, + "TP": 1432, + "n_pred": 1606, + "n_ref": 1538 + }, + "3": { + "Dice": 0.971346114203257, + "FN": 124, + "FP": 15, + "IoU": 0.9442885771543086, + "TN": 10305, + "TP": 2356, + "n_pred": 2371, + "n_ref": 2480 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9650725416442772, + "FN": 118, + "FP": 12, + "IoU": 0.9325025960539979, + "TN": 10874, + "TP": 1796, + "n_pred": 1808, + "n_ref": 1914 + }, + "2": { + "Dice": 0.9001814882032668, + "FN": 44, + "FP": 66, + "IoU": 0.8184818481848185, + "TN": 12194, + "TP": 496, + "n_pred": 562, + "n_ref": 540 + }, + "3": { + "Dice": 0.9736716132120632, + "FN": 43, + "FP": 12, + "IoU": 0.9486940298507462, + "TN": 11728, + "TP": 1017, + "n_pred": 1029, + "n_ref": 1060 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9748878923766816, + "FN": 137, + "FP": 31, + "IoU": 0.9510061242344707, + "TN": 15771, + "TP": 3261, + "n_pred": 3292, + "n_ref": 3398 + }, + "2": { + "Dice": 0.8302765647743814, + "FN": 930, + "FP": 236, + "IoU": 0.7098058735689398, + "TN": 15182, + "TP": 2852, + "n_pred": 3088, + "n_ref": 3782 + }, + "3": { + "Dice": 0.9605426420713045, + "FN": 310, + "FP": 167, + "IoU": 0.9240808530956549, + "TN": 12917, + "TP": 5806, + "n_pred": 5973, + "n_ref": 6116 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9837641529587695, + "FN": 61, + "FP": 91, + "IoU": 0.9680470885011562, + "TN": 1643, + "TP": 4605, + "n_pred": 4696, + "n_ref": 4666 + }, + "2": { + "Dice": 0.9102040816326531, + "FN": 38, + "FP": 50, + "IoU": 0.8352059925093633, + "TN": 5866, + "TP": 446, + "n_pred": 496, + "n_ref": 484 + }, + "3": { + "Dice": 0.9815668202764977, + "FN": 7, + "FP": 17, + "IoU": 0.9638009049773756, + "TN": 5737, + "TP": 639, + "n_pred": 656, + "n_ref": 646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.723331709693132, + "FN": 1117, + "FP": 19, + "IoU": 0.5665776421213278, + "TN": 10179, + "TP": 1485, + "n_pred": 1504, + "n_ref": 2602 + }, + "2": { + "Dice": 0.9431034482758621, + "FN": 70, + "FP": 62, + "IoU": 0.8923327895595432, + "TN": 11574, + "TP": 1094, + "n_pred": 1156, + "n_ref": 1164 + }, + "3": { + "Dice": 0.990843949044586, + "FN": 9, + "FP": 37, + "IoU": 0.9818540433925049, + "TN": 10265, + "TP": 2489, + "n_pred": 2526, + "n_ref": 2498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7604251839738349, + "FN": 489, + "FP": 1562, + "IoU": 0.6134564643799473, + "TN": 13894, + "TP": 3255, + "n_pred": 4817, + "n_ref": 3744 + }, + "2": { + "Dice": 0.9076781043237421, + "FN": 487, + "FP": 713, + "IoU": 0.8309621073390618, + "TN": 12101, + "TP": 5899, + "n_pred": 6612, + "n_ref": 6386 + }, + "3": { + "Dice": 0.8251922677198088, + "FN": 699, + "FP": 142, + "IoU": 0.7024062278839349, + "TN": 16374, + "TP": 1985, + "n_pred": 2127, + "n_ref": 2684 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.86875, + "FN": 614, + "FP": 226, + "IoU": 0.7679558011049724, + "TN": 2780, + "TP": 2780, + "n_pred": 3006, + "n_ref": 3394 + }, + "2": { + "Dice": 0.9123783031988874, + "FN": 64, + "FP": 62, + "IoU": 0.8388746803069054, + "TN": 5618, + "TP": 656, + "n_pred": 718, + "n_ref": 720 + }, + "3": { + "Dice": 0.9430051813471503, + "FN": 4, + "FP": 18, + "IoU": 0.8921568627450981, + "TN": 6196, + "TP": 182, + "n_pred": 200, + "n_ref": 186 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8739946380697051, + "FN": 233, + "FP": 2, + "IoU": 0.7761904761904762, + "TN": 11750, + "TP": 815, + "n_pred": 817, + "n_ref": 1048 + }, + "2": { + "Dice": 0.9341085271317829, + "FN": 77, + "FP": 93, + "IoU": 0.8763636363636363, + "TN": 11425, + "TP": 1205, + "n_pred": 1298, + "n_ref": 1282 + }, + "3": { + "Dice": 0.9678540399652477, + "FN": 12, + "FP": 62, + "IoU": 0.9377104377104377, + "TN": 11612, + "TP": 1114, + "n_pred": 1176, + "n_ref": 1126 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9439728353140917, + "FN": 92, + "FP": 139, + "IoU": 0.8938906752411575, + "TN": 10623, + "TP": 1946, + "n_pred": 2085, + "n_ref": 2038 + }, + "2": { + "Dice": 0.9374198512439087, + "FN": 272, + "FP": 216, + "IoU": 0.8822109582428193, + "TN": 8657, + "TP": 3655, + "n_pred": 3871, + "n_ref": 3927 + }, + "3": { + "Dice": 0.9747331441697068, + "FN": 147, + "FP": 40, + "IoU": 0.9507116499736425, + "TN": 9006, + "TP": 3607, + "n_pred": 3647, + "n_ref": 3754 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7690677966101694, + "FN": 22, + "FP": 196, + "IoU": 0.6247848537005164, + "TN": 5819, + "TP": 363, + "n_pred": 559, + "n_ref": 385 + }, + "2": { + "Dice": 0.8658484976724503, + "FN": 188, + "FP": 129, + "IoU": 0.7634328358208955, + "TN": 5060, + "TP": 1023, + "n_pred": 1152, + "n_ref": 1211 + }, + "3": { + "Dice": 0.9598611412453895, + "FN": 20, + "FP": 165, + "IoU": 0.9228201919065498, + "TN": 4003, + "TP": 2212, + "n_pred": 2377, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2891566265060241, + "FN": 82, + "FP": 921, + "IoU": 0.16901408450704225, + "TN": 30793, + "TP": 204, + "n_pred": 1125, + "n_ref": 286 + }, + "2": { + "Dice": 0.893324607329843, + "FN": 115, + "FP": 211, + "IoU": 0.8072146658781786, + "TN": 30309, + "TP": 1365, + "n_pred": 1576, + "n_ref": 1480 + }, + "3": { + "Dice": 0.9806201550387597, + "FN": 76, + "FP": 24, + "IoU": 0.9619771863117871, + "TN": 29370, + "TP": 2530, + "n_pred": 2554, + "n_ref": 2606 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9244288224956063, + "FN": 25, + "FP": 18, + "IoU": 0.8594771241830066, + "TN": 12494, + "TP": 263, + "n_pred": 281, + "n_ref": 288 + }, + "2": { + "Dice": 0.9218207088255733, + "FN": 275, + "FP": 175, + "IoU": 0.8549790525298099, + "TN": 9697, + "TP": 2653, + "n_pred": 2828, + "n_ref": 2928 + }, + "3": { + "Dice": 0.951310861423221, + "FN": 84, + "FP": 150, + "IoU": 0.9071428571428571, + "TN": 10280, + "TP": 2286, + "n_pred": 2436, + "n_ref": 2370 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7131868131868132, + "FN": 78, + "FP": 966, + "IoU": 0.5542271562766866, + "TN": 10458, + "TP": 1298, + "n_pred": 2264, + "n_ref": 1376 + }, + "2": { + "Dice": 0.95096921322691, + "FN": 12, + "FP": 74, + "IoU": 0.9065217391304348, + "TN": 11880, + "TP": 834, + "n_pred": 908, + "n_ref": 846 + }, + "3": { + "Dice": 0.9727272727272728, + "FN": 18, + "FP": 6, + "IoU": 0.9469026548672567, + "TN": 12348, + "TP": 428, + "n_pred": 434, + "n_ref": 446 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9723926380368099, + "FN": 11, + "FP": 7, + "IoU": 0.9462686567164179, + "TN": 6065, + "TP": 317, + "n_pred": 324, + "n_ref": 328 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8907898488736812, + "FN": 734, + "FP": 32, + "IoU": 0.8030848329048843, + "TN": 8910, + "TP": 3124, + "n_pred": 3156, + "n_ref": 3858 + }, + "2": { + "Dice": 0.9389067524115756, + "FN": 28, + "FP": 67, + "IoU": 0.8848484848484849, + "TN": 11975, + "TP": 730, + "n_pred": 797, + "n_ref": 758 + }, + "3": { + "Dice": 0.9769696969696969, + "FN": 24, + "FP": 14, + "IoU": 0.9549763033175356, + "TN": 11956, + "TP": 806, + "n_pred": 820, + "n_ref": 830 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9612068965517241, + "FN": 67, + "FP": 41, + "IoU": 0.9253112033195021, + "TN": 11354, + "TP": 1338, + "n_pred": 1379, + "n_ref": 1405 + }, + "2": { + "Dice": 0.8945290468133108, + "FN": 69, + "FP": 118, + "IoU": 0.8091836734693878, + "TN": 11820, + "TP": 793, + "n_pred": 911, + "n_ref": 862 + }, + "3": { + "Dice": 0.9522258414766558, + "FN": 47, + "FP": 41, + "IoU": 0.9088082901554404, + "TN": 11835, + "TP": 877, + "n_pred": 918, + "n_ref": 924 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9500576258163658, + "FN": 491, + "FP": 29, + "IoU": 0.9048664471276985, + "TN": 7334, + "TP": 4946, + "n_pred": 4975, + "n_ref": 5437 + }, + "2": { + "Dice": 0.9532775453277545, + "FN": 81, + "FP": 53, + "IoU": 0.9107261825449701, + "TN": 11299, + "TP": 1367, + "n_pred": 1420, + "n_ref": 1448 + }, + "3": { + "Dice": 0.9832264430192402, + "FN": 20, + "FP": 48, + "IoU": 0.9670063076176614, + "TN": 10739, + "TP": 1993, + "n_pred": 2041, + "n_ref": 2013 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9752222999300629, + "FN": 389, + "FP": 107, + "IoU": 0.951642780540119, + "TN": 15343, + "TP": 9761, + "n_pred": 9868, + "n_ref": 10150 + }, + "2": { + "Dice": 0.8771084337349397, + "FN": 77, + "FP": 76, + "IoU": 0.7811158798283262, + "TN": 24901, + "TP": 546, + "n_pred": 622, + "n_ref": 623 + }, + "3": { + "Dice": 0.84375, + "FN": 4, + "FP": 6, + "IoU": 0.7297297297297297, + "TN": 25563, + "TP": 27, + "n_pred": 33, + "n_ref": 31 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8308140341145472, + "FN": 2112, + "FP": 328, + "IoU": 0.7105918633614043, + "TN": 23569, + "TP": 5991, + "n_pred": 6319, + "n_ref": 8103 + }, + "2": { + "Dice": 0.8253231687106397, + "FN": 620, + "FP": 434, + "IoU": 0.7025959367945824, + "TN": 28456, + "TP": 2490, + "n_pred": 2924, + "n_ref": 3110 + }, + "3": { + "Dice": 0.9614093959731543, + "FN": 320, + "FP": 48, + "IoU": 0.925686591276252, + "TN": 27048, + "TP": 4584, + "n_pred": 4632, + "n_ref": 4904 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.857847976307996, + "FN": 277, + "FP": 11, + "IoU": 0.7510803802938635, + "TN": 5243, + "TP": 869, + "n_pred": 880, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7673293927995701, + "FN": 77, + "FP": 356, + "IoU": 0.6224934612031386, + "TN": 5253, + "TP": 714, + "n_pred": 1070, + "n_ref": 791 + }, + "3": { + "Dice": 0.7451114922813036, + "FN": 223, + "FP": 520, + "IoU": 0.5937670858392564, + "TN": 4571, + "TP": 1086, + "n_pred": 1606, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9756587202007528, + "FN": 21, + "FP": 76, + "IoU": 0.9524742773150416, + "TN": 4359, + "TP": 1944, + "n_pred": 2020, + "n_ref": 1965 + }, + "2": { + "Dice": 0.8856877323420075, + "FN": 64, + "FP": 182, + "IoU": 0.7948290241868223, + "TN": 5201, + "TP": 953, + "n_pred": 1135, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9770139634801289, + "FN": 97, + "FP": 10, + "IoU": 0.9550608987820244, + "TN": 4019, + "TP": 2274, + "n_pred": 2284, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.662078956899674, + "FN": 29, + "FP": 1837, + "IoU": 0.494856524093124, + "TN": 15506, + "TP": 1828, + "n_pred": 3665, + "n_ref": 1857 + }, + "2": { + "Dice": 0.9241455959988886, + "FN": 96, + "FP": 177, + "IoU": 0.8589876033057852, + "TN": 17264, + "TP": 1663, + "n_pred": 1840, + "n_ref": 1759 + }, + "3": { + "Dice": 0.9612034837688044, + "FN": 73, + "FP": 25, + "IoU": 0.9253048780487805, + "TN": 17888, + "TP": 1214, + "n_pred": 1239, + "n_ref": 1287 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.923052614947069, + "FN": 142, + "FP": 345, + "IoU": 0.8571009389671361, + "TN": 2992, + "TP": 2921, + "n_pred": 3266, + "n_ref": 3063 + }, + "2": { + "Dice": 0.9151162790697674, + "FN": 76, + "FP": 70, + "IoU": 0.8435155412647374, + "TN": 5467, + "TP": 787, + "n_pred": 857, + "n_ref": 863 + }, + "3": { + "Dice": 0.9615975422427036, + "FN": 42, + "FP": 8, + "IoU": 0.9260355029585798, + "TN": 5724, + "TP": 626, + "n_pred": 634, + "n_ref": 668 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame12.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8884305013461846, + "FN": 195.01190476190473, + "FP": 179.51190476190473, + "IoU": 0.8086982660361555, + "TN": 13548.547619047618, + "TP": 1848.357142857143, + "n_pred": 2027.8690476190477, + "n_ref": 2043.3690476190477 + }, + "mean": { + "1": { + "Dice": 0.8653791217562777, + "FN": 281.9642857142857, + "FP": 200.39285714285714, + "IoU": 0.7731253358892177, + "TN": 13366.25, + "TP": 1922.8214285714287, + "n_pred": 2123.214285714286, + "n_ref": 2204.785714285714 + }, + "2": { + "Dice": 0.8870140535325945, + "FN": 208.85714285714286, + "FP": 244.42857142857142, + "IoU": 0.8003972483669837, + "TN": 13336.464285714286, + "TP": 1981.6785714285713, + "n_pred": 2226.1071428571427, + "n_ref": 2190.535714285714 + }, + "3": { + "Dice": 0.9128983287496815, + "FN": 94.21428571428571, + "FP": 93.71428571428571, + "IoU": 0.8525722138522653, + "TN": 13942.92857142857, + "TP": 1640.5714285714287, + "n_pred": 1734.2857142857142, + "n_ref": 1734.7857142857142 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9163078579117331, + "FN": 581, + "FP": 41, + "IoU": 0.8455425875341446, + "TN": 15173, + "TP": 3405, + "n_pred": 3446, + "n_ref": 3986 + }, + "2": { + "Dice": 0.9264435973457574, + "FN": 229, + "FP": 292, + "IoU": 0.8629668595476065, + "TN": 15398, + "TP": 3281, + "n_pred": 3573, + "n_ref": 3510 + }, + "3": { + "Dice": 0.9761237529424952, + "FN": 108, + "FP": 105, + "IoU": 0.9533610685351435, + "TN": 14633, + "TP": 4354, + "n_pred": 4459, + "n_ref": 4462 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6674378253325621, + "FN": 1004, + "FP": 146, + "IoU": 0.5008680555555556, + "TN": 16896, + "TP": 1154, + "n_pred": 1300, + "n_ref": 2158 + }, + "2": { + "Dice": 0.8747159521284654, + "FN": 509, + "FP": 318, + "IoU": 0.7773290253096392, + "TN": 15486, + "TP": 2887, + "n_pred": 3205, + "n_ref": 3396 + }, + "3": { + "Dice": 0.9602446483180428, + "FN": 209, + "FP": 90, + "IoU": 0.9235294117647059, + "TN": 15290, + "TP": 3611, + "n_pred": 3701, + "n_ref": 3820 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.976222020779583, + "FN": 72, + "FP": 269, + "IoU": 0.9535485628660946, + "TN": 11859, + "TP": 7000, + "n_pred": 7269, + "n_ref": 7072 + }, + "2": { + "Dice": 0.8267868641339343, + "FN": 288, + "FP": 519, + "IoU": 0.7047200878155873, + "TN": 16467, + "TP": 1926, + "n_pred": 2445, + "n_ref": 2214 + }, + "3": { + "Dice": 0.9735084758200631, + "FN": 319, + "FP": 42, + "IoU": 0.9483843294252217, + "TN": 12206, + "TP": 6633, + "n_pred": 6675, + "n_ref": 6952 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.813585291113381, + "FN": 697, + "FP": 33, + "IoU": 0.6857511838140335, + "TN": 16877, + "TP": 1593, + "n_pred": 1626, + "n_ref": 2290 + }, + "2": { + "Dice": 0.9252856724289481, + "FN": 157, + "FP": 98, + "IoU": 0.8609596510359869, + "TN": 17366, + "TP": 1579, + "n_pred": 1677, + "n_ref": 1736 + }, + "3": { + "Dice": 0.9778917013777635, + "FN": 4, + "FP": 65, + "IoU": 0.9567398119122257, + "TN": 17605, + "TP": 1526, + "n_pred": 1591, + "n_ref": 1530 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8550640279394645, + "FN": 49, + "FP": 449, + "IoU": 0.7468225724453482, + "TN": 17233, + "TP": 1469, + "n_pred": 1918, + "n_ref": 1518 + }, + "2": { + "Dice": 0.9074713688420287, + "FN": 315, + "FP": 194, + "IoU": 0.8306156405990016, + "TN": 16195, + "TP": 2496, + "n_pred": 2690, + "n_ref": 2811 + }, + "3": { + "Dice": 0.7570332480818415, + "FN": 15, + "FP": 175, + "IoU": 0.6090534979423868, + "TN": 18714, + "TP": 296, + "n_pred": 471, + "n_ref": 311 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9139784946236559, + "FN": 48, + "FP": 16, + "IoU": 0.8415841584158416, + "TN": 5996, + "TP": 340, + "n_pred": 356, + "n_ref": 388 + }, + "2": { + "Dice": 0.9452094931145619, + "FN": 178, + "FP": 196, + "IoU": 0.8961111111111111, + "TN": 2800, + "TP": 3226, + "n_pred": 3422, + "n_ref": 3404 + }, + "3": { + "Dice": 0.9454390451832907, + "FN": 81, + "FP": 47, + "IoU": 0.8965238480194018, + "TN": 5163, + "TP": 1109, + "n_pred": 1156, + "n_ref": 1190 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8729851708575113, + "FN": 197, + "FP": 0, + "IoU": 0.7745995423340961, + "TN": 11926, + "TP": 677, + "n_pred": 677, + "n_ref": 874 + }, + "2": { + "Dice": 0.8999117387466902, + "FN": 445, + "FP": 122, + "IoU": 0.8180359435173299, + "TN": 9684, + "TP": 2549, + "n_pred": 2671, + "n_ref": 2994 + }, + "3": { + "Dice": 0.9308814204185162, + "FN": 42, + "FP": 67, + "IoU": 0.8706998813760379, + "TN": 11957, + "TP": 734, + "n_pred": 801, + "n_ref": 776 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9615069615069615, + "FN": 32, + "FP": 62, + "IoU": 0.9258675078864353, + "TN": 17932, + "TP": 1174, + "n_pred": 1236, + "n_ref": 1206 + }, + "2": { + "Dice": 0.9253657327051823, + "FN": 180, + "FP": 121, + "IoU": 0.8610982925703737, + "TN": 17033, + "TP": 1866, + "n_pred": 1987, + "n_ref": 2046 + }, + "3": { + "Dice": 0.9208211143695014, + "FN": 81, + "FP": 54, + "IoU": 0.8532608695652174, + "TN": 18280, + "TP": 785, + "n_pred": 839, + "n_ref": 866 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9623750734861846, + "FN": 424, + "FP": 88, + "IoU": 0.9274787535410765, + "TN": 5740, + "TP": 6548, + "n_pred": 6636, + "n_ref": 6972 + }, + "2": { + "Dice": 0.9325021496130697, + "FN": 157, + "FP": 157, + "IoU": 0.8735400724929521, + "TN": 10317, + "TP": 2169, + "n_pred": 2326, + "n_ref": 2326 + }, + "3": { + "Dice": 0.9620094191522763, + "FN": 48, + "FP": 73, + "IoU": 0.926799758015729, + "TN": 11147, + "TP": 1532, + "n_pred": 1605, + "n_ref": 1580 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8385332904470891, + "FN": 781, + "FP": 223, + "IoU": 0.7219606757130989, + "TN": 28389, + "TP": 2607, + "n_pred": 2830, + "n_ref": 3388 + }, + "2": { + "Dice": 0.9066315327184893, + "FN": 275, + "FP": 788, + "IoU": 0.8292095115681234, + "TN": 25776, + "TP": 5161, + "n_pred": 5949, + "n_ref": 5436 + }, + "3": { + "Dice": 0.9356999330207636, + "FN": 59, + "FP": 133, + "IoU": 0.8791692888609188, + "TN": 30411, + "TP": 1397, + "n_pred": 1530, + "n_ref": 1456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7893706293706294, + "FN": 137, + "FP": 616, + "IoU": 0.6520332717190388, + "TN": 17036, + "TP": 1411, + "n_pred": 2027, + "n_ref": 1548 + }, + "2": { + "Dice": 0.8788759689922481, + "FN": 318, + "FP": 182, + "IoU": 0.783923941227312, + "TN": 16886, + "TP": 1814, + "n_pred": 1996, + "n_ref": 2132 + }, + "3": { + "Dice": 0.8835745752045312, + "FN": 116, + "FP": 69, + "IoU": 0.7914317925591883, + "TN": 18313, + "TP": 702, + "n_pred": 771, + "n_ref": 818 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7582480091012515, + "FN": 819, + "FP": 31, + "IoU": 0.6106275767292716, + "TN": 17017, + "TP": 1333, + "n_pred": 1364, + "n_ref": 2152 + }, + "2": { + "Dice": 0.8978517270429655, + "FN": 479, + "FP": 491, + "IoU": 0.8146378750238868, + "TN": 13967, + "TP": 4263, + "n_pred": 4754, + "n_ref": 4742 + }, + "3": { + "Dice": 0.9337979094076655, + "FN": 230, + "FP": 17, + "IoU": 0.8758169934640523, + "TN": 17211, + "TP": 1742, + "n_pred": 1759, + "n_ref": 1972 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8076498712762045, + "FN": 216, + "FP": 307, + "IoU": 0.6773596545342381, + "TN": 49579, + "TP": 1098, + "n_pred": 1405, + "n_ref": 1314 + }, + "2": { + "Dice": 0.9217609761933245, + "FN": 933, + "FP": 375, + "IoU": 0.854876289803617, + "TN": 42187, + "TP": 7705, + "n_pred": 8080, + "n_ref": 8638 + }, + "3": { + "Dice": 0.8863381858902576, + "FN": 331, + "FP": 75, + "IoU": 0.7958773252890899, + "TN": 49211, + "TP": 1583, + "n_pred": 1658, + "n_ref": 1914 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6954436450839329, + "FN": 226, + "FP": 28, + "IoU": 0.5330882352941176, + "TN": 18656, + "TP": 290, + "n_pred": 318, + "n_ref": 516 + }, + "2": { + "Dice": 0.8711247758134768, + "FN": 72, + "FP": 431, + "IoU": 0.7716749886518384, + "TN": 16997, + "TP": 1700, + "n_pred": 2131, + "n_ref": 1772 + }, + "3": { + "Dice": 0.9871385746059376, + "FN": 92, + "FP": 41, + "IoU": 0.9746037807905289, + "TN": 13963, + "TP": 5104, + "n_pred": 5145, + "n_ref": 5196 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.973531310522918, + "FN": 48, + "FP": 198, + "IoU": 0.9484276729559749, + "TN": 8030, + "TP": 4524, + "n_pred": 4722, + "n_ref": 4572 + }, + "2": { + "Dice": 0.8056371109806224, + "FN": 64, + "FP": 267, + "IoU": 0.6745329400196657, + "TN": 11783, + "TP": 686, + "n_pred": 953, + "n_ref": 750 + }, + "3": { + "Dice": 0.9570284049526584, + "FN": 37, + "FP": 22, + "IoU": 0.9175977653631285, + "TN": 12084, + "TP": 657, + "n_pred": 679, + "n_ref": 694 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8316258351893095, + "FN": 561, + "FP": 195, + "IoU": 0.7117804041174228, + "TN": 16577, + "TP": 1867, + "n_pred": 2062, + "n_ref": 2428 + }, + "2": { + "Dice": 0.8301172909572455, + "FN": 204, + "FP": 694, + "IoU": 0.7095730918499353, + "TN": 16108, + "TP": 2194, + "n_pred": 2888, + "n_ref": 2398 + }, + "3": { + "Dice": 0.8752841339596908, + "FN": 218, + "FP": 605, + "IoU": 0.7782268930207491, + "TN": 15489, + "TP": 2888, + "n_pred": 3493, + "n_ref": 3106 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8954468802698144, + "FN": 71, + "FP": 53, + "IoU": 0.8106870229007633, + "TN": 12145, + "TP": 531, + "n_pred": 584, + "n_ref": 602 + }, + "2": { + "Dice": 0.7874015748031497, + "FN": 400, + "FP": 86, + "IoU": 0.6493506493506493, + "TN": 11414, + "TP": 900, + "n_pred": 986, + "n_ref": 1300 + }, + "3": { + "Dice": 0.9726808766136296, + "FN": 130, + "FP": 52, + "IoU": 0.9468147282291058, + "TN": 9378, + "TP": 3240, + "n_pred": 3292, + "n_ref": 3370 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8697819314641745, + "FN": 796, + "FP": 40, + "IoU": 0.7695700110253583, + "TN": 2772, + "TP": 2792, + "n_pred": 2832, + "n_ref": 3588 + }, + "2": { + "Dice": 0.9655526992287917, + "FN": 43, + "FP": 24, + "IoU": 0.9333996023856859, + "TN": 5394, + "TP": 939, + "n_pred": 963, + "n_ref": 982 + }, + "3": { + "Dice": 0.9878127004490058, + "FN": 10, + "FP": 9, + "IoU": 0.9759188846641318, + "TN": 5611, + "TP": 770, + "n_pred": 779, + "n_ref": 780 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9514514514514515, + "FN": 96, + "FP": 98, + "IoU": 0.9073985680190931, + "TN": 10705, + "TP": 1901, + "n_pred": 1999, + "n_ref": 1997 + }, + "2": { + "Dice": 0.9135687732342007, + "FN": 49, + "FP": 137, + "IoU": 0.8408896492728828, + "TN": 11631, + "TP": 983, + "n_pred": 1120, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9351316634553629, + "FN": 78, + "FP": 23, + "IoU": 0.8781664656212304, + "TN": 11971, + "TP": 728, + "n_pred": 751, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.963216957605985, + "FN": 91, + "FP": 27, + "IoU": 0.9290438965724594, + "TN": 4737, + "TP": 1545, + "n_pred": 1572, + "n_ref": 1636 + }, + "2": { + "Dice": 0.9089099054255849, + "FN": 61, + "FP": 122, + "IoU": 0.833029197080292, + "TN": 5304, + "TP": 913, + "n_pred": 1035, + "n_ref": 974 + }, + "3": { + "Dice": 0.9688747007182761, + "FN": 36, + "FP": 42, + "IoU": 0.9396284829721362, + "TN": 5108, + "TP": 1214, + "n_pred": 1256, + "n_ref": 1250 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9001814882032668, + "FN": 74, + "FP": 91, + "IoU": 0.8184818481848185, + "TN": 5491, + "TP": 744, + "n_pred": 835, + "n_ref": 818 + }, + "2": { + "Dice": 0.8759124087591241, + "FN": 167, + "FP": 71, + "IoU": 0.7792207792207793, + "TN": 5322, + "TP": 840, + "n_pred": 911, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9505804311774461, + "FN": 4, + "FP": 145, + "IoU": 0.9058154235145386, + "TN": 4818, + "TP": 1433, + "n_pred": 1578, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7898894154818326, + "FN": 84, + "FP": 315, + "IoU": 0.6527415143603134, + "TN": 11651, + "TP": 750, + "n_pred": 1065, + "n_ref": 834 + }, + "3": { + "Dice": 0.65, + "FN": 28, + "FP": 0, + "IoU": 0.48148148148148145, + "TN": 12746, + "TP": 26, + "n_pred": 26, + "n_ref": 54 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6662788442893155, + "FN": 126, + "FP": 1595, + "IoU": 0.49956382669380633, + "TN": 15761, + "TP": 1718, + "n_pred": 3313, + "n_ref": 1844 + }, + "2": { + "Dice": 0.9075573549257759, + "FN": 21, + "FP": 253, + "IoU": 0.8307597282273008, + "TN": 17581, + "TP": 1345, + "n_pred": 1598, + "n_ref": 1366 + }, + "3": { + "Dice": 0.9632829373650108, + "FN": 24, + "FP": 10, + "IoU": 0.9291666666666667, + "TN": 18720, + "TP": 446, + "n_pred": 456, + "n_ref": 470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8636734693877551, + "FN": 48, + "FP": 620, + "IoU": 0.7600574712643678, + "TN": 3616, + "TP": 2116, + "n_pred": 2736, + "n_ref": 2164 + }, + "2": { + "Dice": 0.9286754002911208, + "FN": 40, + "FP": 156, + "IoU": 0.8668478260869565, + "TN": 4928, + "TP": 1276, + "n_pred": 1432, + "n_ref": 1316 + }, + "3": { + "Dice": 0.9466546112115732, + "FN": 113, + "FP": 5, + "IoU": 0.8987124463519314, + "TN": 5235, + "TP": 1047, + "n_pred": 1052, + "n_ref": 1160 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient075_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.905436013590034, + "FN": 33, + "FP": 301, + "IoU": 0.827211588204863, + "TN": 10867, + "TP": 1599, + "n_pred": 1900, + "n_ref": 1632 + }, + "2": { + "Dice": 0.7864845434938893, + "FN": 13, + "FP": 284, + "IoU": 0.6481042654028436, + "TN": 11956, + "TP": 547, + "n_pred": 831, + "n_ref": 560 + }, + "3": { + "Dice": 0.5683646112600537, + "FN": 2, + "FP": 642, + "IoU": 0.3970037453183521, + "TN": 11732, + "TP": 424, + "n_pred": 1066, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9297658862876255, + "FN": 24, + "FP": 18, + "IoU": 0.86875, + "TN": 6080, + "TP": 278, + "n_pred": 296, + "n_ref": 302 + }, + "2": { + "Dice": 0.9007992477668078, + "FN": 92, + "FP": 119, + "IoU": 0.8195038494439693, + "TN": 5231, + "TP": 958, + "n_pred": 1077, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9724208375893769, + "FN": 76, + "FP": 5, + "IoU": 0.9463220675944334, + "TN": 4891, + "TP": 1428, + "n_pred": 1433, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9207589285714286, + "FN": 644, + "FP": 66, + "IoU": 0.8531540847983454, + "TN": 7965, + "TP": 4125, + "n_pred": 4191, + "n_ref": 4769 + }, + "2": { + "Dice": 0.908936170212766, + "FN": 75, + "FP": 32, + "IoU": 0.8330733229329174, + "TN": 12159, + "TP": 534, + "n_pred": 566, + "n_ref": 609 + }, + "3": { + "Dice": 0.8696369636963697, + "FN": 147, + "FP": 11, + "IoU": 0.7693430656934307, + "TN": 12115, + "TP": 527, + "n_pred": 538, + "n_ref": 674 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2678711/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset056_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-90__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8721618621518873, + "FN": 261.2357142857143, + "FP": 249.0071428571429, + "IoU": 0.7945787941790795, + "TN": 13988.373809523811, + "TP": 1958.52619047619, + "n_pred": 2207.5333333333333, + "n_ref": 2219.761904761905 + }, + "mean": { + "1": { + "Dice": 0.8243760899159284, + "FN": 362.79285714285714, + "FP": 307.92857142857144, + "IoU": 0.7343211199926132, + "TN": 13601.942857142858, + "TP": 2184.4785714285717, + "n_pred": 2492.4071428571433, + "n_ref": 2547.2714285714283 + }, + "2": { + "Dice": 0.8740252747306609, + "FN": 258.60714285714283, + "FP": 239.91428571428574, + "IoU": 0.7863759740525955, + "TN": 14225.542857142858, + "TP": 1733.0785714285714, + "n_pred": 1972.9928571428572, + "n_ref": 1991.685714285714 + }, + "3": { + "Dice": 0.9180842218090726, + "FN": 162.30714285714285, + "FP": 199.17857142857142, + "IoU": 0.8630392884920299, + "TN": 14137.635714285712, + "TP": 1958.0214285714287, + "n_pred": 2157.2, + "n_ref": 2120.328571428571 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_000/summary.json b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_000/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..142226bdc3caee29dab61044a30ea2ae7e7fa564 --- /dev/null +++ b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_000/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8210558294002546, + "FN": 1794.7133333333334, + "FP": 1207.4, + "IoU": 0.7167094366040662, + "TN": 843027.1266666666, + "TP": 8399.4, + "n_pred": 9606.800000000001, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.7525740918191158, + "FN": 2628.52, + "FP": 1280.66, + "IoU": 0.6267214000753808, + "TN": 843293.92, + "TP": 7225.54, + "n_pred": 8506.2, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8053777611544475, + "FN": 2013.32, + "FP": 1490.44, + "IoU": 0.6861486053131683, + "TN": 842882.7, + "TP": 8042.18, + "n_pred": 9532.62, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9052156352272003, + "FN": 742.3, + "FP": 851.1, + "IoU": 0.8372583044236492, + "TN": 842904.76, + "TP": 9930.48, + "n_pred": 10781.58, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.864660639589799, + "FN": 1834, + "FP": 1175, + "IoU": 0.7615878298074638, + "TN": 1093299, + "TP": 9612, + "n_pred": 10787, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8576347047684627, + "FN": 1001, + "FP": 3134, + "IoU": 0.7507534659433394, + "TN": 1089330, + "TP": 12455, + "n_pred": 15589, + "n_ref": 13456 + }, + "3": { + "Dice": 0.946521783284249, + "FN": 907, + "FP": 1726, + "IoU": 0.8984730469653737, + "TN": 1079986, + "TP": 23301, + "n_pred": 25027, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8758627035980492, + "FN": 119, + "FP": 1230, + "IoU": 0.7791421087098886, + "TN": 1099812, + "TP": 4759, + "n_pred": 5989, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8700572195761276, + "FN": 2371, + "FP": 1694, + "IoU": 0.7700011316057486, + "TN": 1088246, + "TP": 13609, + "n_pred": 15303, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9520745506989128, + "FN": 1318, + "FP": 410, + "IoU": 0.9085327122591573, + "TN": 1087028, + "TP": 17164, + "n_pred": 17574, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6103496503496504, + "FN": 4506, + "FP": 1066, + "IoU": 0.4392109500805153, + "TN": 899504, + "TP": 4364, + "n_pred": 5430, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8737545247602344, + "FN": 2079, + "FP": 1304, + "IoU": 0.7758117958913188, + "TN": 894350, + "TP": 11707, + "n_pred": 13011, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9656930480773812, + "FN": 1145, + "FP": 295, + "IoU": 0.9336619523655963, + "TN": 887733, + "TP": 20267, + "n_pred": 20562, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.46272263492347626, + "FN": 4393, + "FP": 1610, + "IoU": 0.30100139729855613, + "TN": 900852, + "TP": 2585, + "n_pred": 4195, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8544795807098385, + "FN": 2178, + "FP": 1959, + "IoU": 0.7459313394337653, + "TN": 893157, + "TP": 12146, + "n_pred": 14105, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9614325068870524, + "FN": 1184, + "FP": 216, + "IoU": 0.9257294429708223, + "TN": 890590, + "TP": 17450, + "n_pred": 17666, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8227444015073326, + "FN": 7039, + "FP": 346, + "IoU": 0.6988664165715218, + "TN": 1401236, + "TP": 17139, + "n_pred": 17485, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8486972032872523, + "FN": 1762, + "FP": 2988, + "IoU": 0.7371624612660469, + "TN": 1407688, + "TP": 13322, + "n_pred": 16310, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9663563351580293, + "FN": 1091, + "FP": 593, + "IoU": 0.9349027793884572, + "TN": 1399891, + "TP": 24185, + "n_pred": 24778, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8590823381521056, + "FN": 3882, + "FP": 602, + "IoU": 0.752974878801234, + "TN": 1407608, + "TP": 13668, + "n_pred": 14270, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8424598760527571, + "FN": 1814, + "FP": 3143, + "IoU": 0.7278018779858327, + "TN": 1407549, + "TP": 13254, + "n_pred": 16397, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9551128937761955, + "FN": 1507, + "FP": 485, + "IoU": 0.9140823808496873, + "TN": 1402575, + "TP": 21193, + "n_pred": 21678, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8116122601544978, + "FN": 2744, + "FP": 280, + "IoU": 0.6829524009226253, + "TN": 752510, + "TP": 6514, + "n_pred": 6794, + "n_ref": 9258 + }, + "2": { + "Dice": 0.857539958304378, + "FN": 1389, + "FP": 1276, + "IoU": 0.7506082725060828, + "TN": 751362, + "TP": 8021, + "n_pred": 9297, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9677276746242264, + "FN": 693, + "FP": 329, + "IoU": 0.9374732334047109, + "TN": 745703, + "TP": 15323, + "n_pred": 15652, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8015915689859124, + "FN": 1191, + "FP": 654, + "IoU": 0.6688801148600143, + "TN": 756476, + "TP": 3727, + "n_pred": 4381, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8095851830636307, + "FN": 2758, + "FP": 1231, + "IoU": 0.6800866148047157, + "TN": 749579, + "TP": 8480, + "n_pred": 9711, + "n_ref": 11238 + }, + "3": { + "Dice": 0.945754197329573, + "FN": 1181, + "FP": 50, + "IoU": 0.8970907874937302, + "TN": 750086, + "TP": 10731, + "n_pred": 10781, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.30541583810972045, + "FN": 11233, + "FP": 643, + "IoU": 0.180230551528957, + "TN": 1063785, + "TP": 2611, + "n_pred": 3254, + "n_ref": 13844 + }, + "2": { + "Dice": 0.707491979618796, + "FN": 2372, + "FP": 3828, + "IoU": 0.5473791794422543, + "TN": 1064574, + "TP": 7498, + "n_pred": 11326, + "n_ref": 9870 + }, + "3": { + "Dice": 0.8113409865018292, + "FN": 5541, + "FP": 441, + "IoU": 0.682568320509419, + "TN": 1059427, + "TP": 12863, + "n_pred": 13304, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3906039482162732, + "FN": 9962, + "FP": 441, + "IoU": 0.24270219116255368, + "TN": 1064535, + "TP": 3334, + "n_pred": 3775, + "n_ref": 13296 + }, + "2": { + "Dice": 0.7197082263947049, + "FN": 2808, + "FP": 3417, + "IoU": 0.5621439122177675, + "TN": 1064055, + "TP": 7992, + "n_pred": 11409, + "n_ref": 10800 + }, + "3": { + "Dice": 0.7936592210550267, + "FN": 4762, + "FP": 679, + "IoU": 0.6579063187676831, + "TN": 1062367, + "TP": 10464, + "n_pred": 11143, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8469750889679716, + "FN": 2230, + "FP": 264, + "IoU": 0.7345679012345679, + "TN": 1096524, + "TP": 6902, + "n_pred": 7166, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8210382513661202, + "FN": 1866, + "FP": 2326, + "IoU": 0.6964078794901506, + "TN": 1092112, + "TP": 9616, + "n_pred": 11942, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9014445679117873, + "FN": 950, + "FP": 1356, + "IoU": 0.82057267351385, + "TN": 1093068, + "TP": 10546, + "n_pred": 11902, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6680362951549392, + "FN": 1101, + "FP": 838, + "IoU": 0.5015424164524421, + "TN": 1102030, + "TP": 1951, + "n_pred": 2789, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8248559872533399, + "FN": 2257, + "FP": 2030, + "IoU": 0.7019190654985399, + "TN": 1091538, + "TP": 10095, + "n_pred": 12125, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7923718110633998, + "FN": 143, + "FP": 1501, + "IoU": 0.6561388830788538, + "TN": 1101139, + "TP": 3137, + "n_pred": 4638, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8894707520891365, + "FN": 1181, + "FP": 803, + "IoU": 0.8009431122704926, + "TN": 1136913, + "TP": 7983, + "n_pred": 8786, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8860645298238166, + "FN": 2719, + "FP": 1575, + "IoU": 0.7954361392977943, + "TN": 1125889, + "TP": 16697, + "n_pred": 18272, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9438491213030433, + "FN": 920, + "FP": 390, + "IoU": 0.8936688311688312, + "TN": 1134560, + "TP": 11010, + "n_pred": 11400, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.31357304826692584, + "FN": 1498, + "FP": 2740, + "IoU": 0.18593930080676144, + "TN": 1141674, + "TP": 968, + "n_pred": 3708, + "n_ref": 2466 + }, + "2": { + "Dice": 0.5862502417327403, + "FN": 12310, + "FP": 4806, + "IoU": 0.41467751863757607, + "TN": 1117638, + "TP": 12126, + "n_pred": 16932, + "n_ref": 24436 + }, + "3": { + "Dice": 0.39990390775144136, + "FN": 219, + "FP": 7275, + "IoU": 0.24992493243919528, + "TN": 1136889, + "TP": 2497, + "n_pred": 9772, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8893071943436941, + "FN": 2161, + "FP": 250, + "IoU": 0.80067791005291, + "TN": 788704, + "TP": 9685, + "n_pred": 9935, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8590058914373964, + "FN": 1125, + "FP": 1340, + "IoU": 0.7528574293162221, + "TN": 790826, + "TP": 7509, + "n_pred": 8849, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9474440320842811, + "FN": 739, + "FP": 139, + "IoU": 0.9001364877161055, + "TN": 792008, + "TP": 7914, + "n_pred": 8053, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6504065040650406, + "FN": 619, + "FP": 2950, + "IoU": 0.4819277108433735, + "TN": 793911, + "TP": 3320, + "n_pred": 6270, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8577476348870362, + "FN": 2724, + "FP": 569, + "IoU": 0.7509265562362908, + "TN": 787579, + "TP": 9928, + "n_pred": 10497, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8638586527843508, + "FN": 108, + "FP": 755, + "IoU": 0.7603443487920022, + "TN": 797199, + "TP": 2738, + "n_pred": 3493, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9280875088214537, + "FN": 1041, + "FP": 997, + "IoU": 0.8658239515438805, + "TN": 1332651, + "TP": 13151, + "n_pred": 14148, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8729496539300275, + "FN": 1399, + "FP": 1281, + "IoU": 0.7745436190796668, + "TN": 1335953, + "TP": 9207, + "n_pred": 10488, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9715579289528674, + "FN": 590, + "FP": 390, + "IoU": 0.944689016819054, + "TN": 1330122, + "TP": 16738, + "n_pred": 17128, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7900621118012422, + "FN": 462, + "FP": 2411, + "IoU": 0.6529774127310062, + "TN": 1339561, + "TP": 5406, + "n_pred": 7817, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8311778793816678, + "FN": 2570, + "FP": 1307, + "IoU": 0.711124357350421, + "TN": 1334419, + "TP": 9544, + "n_pred": 10851, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9433305788718306, + "FN": 773, + "FP": 530, + "IoU": 0.8927395456042146, + "TN": 1335692, + "TP": 10845, + "n_pred": 11375, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.826789653098055, + "FN": 2154, + "FP": 2165, + "IoU": 0.7047241402885076, + "TN": 837341, + "TP": 10308, + "n_pred": 12473, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8280599709171138, + "FN": 1191, + "FP": 2238, + "IoU": 0.7065719664555878, + "TN": 840282, + "TP": 8257, + "n_pred": 10495, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9482847179043551, + "FN": 949, + "FP": 964, + "IoU": 0.9016553567756529, + "TN": 832516, + "TP": 17539, + "n_pred": 18503, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8550289356091129, + "FN": 1102, + "FP": 877, + "IoU": 0.7467690339091491, + "TN": 844153, + "TP": 5836, + "n_pred": 6713, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8518387239698715, + "FN": 1679, + "FP": 1665, + "IoU": 0.7419155668750482, + "TN": 839011, + "TP": 9613, + "n_pred": 11278, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9273848715329019, + "FN": 742, + "FP": 1177, + "IoU": 0.8646017074719538, + "TN": 837795, + "TP": 12254, + "n_pred": 13431, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5719637839525444, + "FN": 3108, + "FP": 1005, + "IoU": 0.4005247048535199, + "TN": 845107, + "TP": 2748, + "n_pred": 3753, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8114909781576448, + "FN": 2175, + "FP": 1795, + "IoU": 0.682780663204155, + "TN": 839453, + "TP": 8545, + "n_pred": 10340, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9077645480462855, + "FN": 2130, + "FP": 70, + "IoU": 0.8311070167357593, + "TN": 838942, + "TP": 10826, + "n_pred": 10896, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4922336469043973, + "FN": 979, + "FP": 1342, + "IoU": 0.3264654672083575, + "TN": 848522, + "TP": 1125, + "n_pred": 2467, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8322171001130729, + "FN": 3018, + "FP": 840, + "IoU": 0.7126471026366751, + "TN": 838542, + "TP": 9568, + "n_pred": 10408, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9391919309025564, + "FN": 645, + "FP": 404, + "IoU": 0.8853551912568306, + "TN": 842818, + "TP": 8101, + "n_pred": 8505, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5784468382386082, + "FN": 6671, + "FP": 2682, + "IoU": 0.4069118579581484, + "TN": 781270, + "TP": 6417, + "n_pred": 9099, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7834302325581395, + "FN": 1847, + "FP": 2027, + "IoU": 0.6439665471923537, + "TN": 786159, + "TP": 7007, + "n_pred": 9034, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9421564449265817, + "FN": 1299, + "FP": 194, + "IoU": 0.8906387342513917, + "TN": 783388, + "TP": 12159, + "n_pred": 12353, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6290789971021796, + "FN": 2675, + "FP": 3213, + "IoU": 0.4588732653248782, + "TN": 786159, + "TP": 4993, + "n_pred": 8206, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8287056813327638, + "FN": 1862, + "FP": 1346, + "IoU": 0.7075127644055434, + "TN": 786072, + "TP": 7760, + "n_pred": 9106, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9427203604618417, + "FN": 663, + "FP": 354, + "IoU": 0.8916471340294055, + "TN": 787654, + "TP": 8369, + "n_pred": 8723, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8904912122577737, + "FN": 1600, + "FP": 1073, + "IoU": 0.8025995125913891, + "TN": 883129, + "TP": 10868, + "n_pred": 11941, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8363829479071114, + "FN": 1676, + "FP": 1713, + "IoU": 0.7187785246037673, + "TN": 884619, + "TP": 8662, + "n_pred": 10375, + "n_ref": 10338 + }, + "3": { + "Dice": 0.941452907773644, + "FN": 232, + "FP": 1263, + "IoU": 0.8893821679615243, + "TN": 883155, + "TP": 12020, + "n_pred": 13283, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7726775956284153, + "FN": 1407, + "FP": 1505, + "IoU": 0.6295636687444346, + "TN": 888809, + "TP": 4949, + "n_pred": 6454, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8387985426108593, + "FN": 2079, + "FP": 1549, + "IoU": 0.7223540215810821, + "TN": 883603, + "TP": 9439, + "n_pred": 10988, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9300087489063867, + "FN": 322, + "FP": 958, + "IoU": 0.8691741618969746, + "TN": 886886, + "TP": 8504, + "n_pred": 9462, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9445785286493251, + "FN": 653, + "FP": 587, + "IoU": 0.8949775556873042, + "TN": 750241, + "TP": 10567, + "n_pred": 11154, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8973476412229197, + "FN": 1548, + "FP": 480, + "IoU": 0.8138082996694822, + "TN": 751156, + "TP": 8864, + "n_pred": 9344, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9668773704171935, + "FN": 280, + "FP": 506, + "IoU": 0.9358786098874204, + "TN": 749790, + "TP": 11472, + "n_pred": 11978, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7475353621945993, + "FN": 304, + "FP": 2052, + "IoU": 0.5968514715947981, + "TN": 756204, + "TP": 3488, + "n_pred": 5540, + "n_ref": 3792 + }, + "2": { + "Dice": 0.815089319650323, + "FN": 3054, + "FP": 838, + "IoU": 0.6878909382518044, + "TN": 749578, + "TP": 8578, + "n_pred": 9416, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9357045143638851, + "FN": 336, + "FP": 557, + "IoU": 0.8791773778920309, + "TN": 754657, + "TP": 6498, + "n_pred": 7055, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8292865147553231, + "FN": 172, + "FP": 3027, + "IoU": 0.7083599234205488, + "TN": 984359, + "TP": 7770, + "n_pred": 10797, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8180898876404494, + "FN": 1467, + "FP": 1771, + "IoU": 0.6921760623633425, + "TN": 984809, + "TP": 7281, + "n_pred": 9052, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9631817517180874, + "FN": 78, + "FP": 1181, + "IoU": 0.9289783945394031, + "TN": 977601, + "TP": 16468, + "n_pred": 17649, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7561740002507208, + "FN": 226, + "FP": 1719, + "IoU": 0.6079419471880669, + "TN": 990367, + "TP": 3016, + "n_pred": 4735, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8102684827083684, + "FN": 1106, + "FP": 2279, + "IoU": 0.68105154056346, + "TN": 984715, + "TP": 7228, + "n_pred": 9507, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9245233050847458, + "FN": 141, + "FP": 1569, + "IoU": 0.8596404826397439, + "TN": 983145, + "TP": 10473, + "n_pred": 12042, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9519791182465048, + "FN": 1012, + "FP": 331, + "IoU": 0.908358921869669, + "TN": 743361, + "TP": 13312, + "n_pred": 13643, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8995165745856354, + "FN": 997, + "FP": 749, + "IoU": 0.817383118920615, + "TN": 748455, + "TP": 7815, + "n_pred": 8564, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9705805095876018, + "FN": 217, + "FP": 455, + "IoU": 0.9428425618780301, + "TN": 746259, + "TP": 11085, + "n_pred": 11540, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.740589390962672, + "FN": 524, + "FP": 2777, + "IoU": 0.5880444278048171, + "TN": 750003, + "TP": 4712, + "n_pred": 7489, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8893293690122234, + "FN": 1256, + "FP": 754, + "IoU": 0.8007138607971446, + "TN": 747930, + "TP": 8076, + "n_pred": 8830, + "n_ref": 9332 + }, + "3": { + "Dice": 0.876839659178931, + "FN": 230, + "FP": 883, + "IoU": 0.7806896551724138, + "TN": 752941, + "TP": 3962, + "n_pred": 4845, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8405077654067088, + "FN": 2020, + "FP": 229, + "IoU": 0.7248929663608563, + "TN": 630801, + "TP": 5926, + "n_pred": 6155, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8715762742608381, + "FN": 561, + "FP": 855, + "IoU": 0.7723838611155762, + "TN": 632755, + "TP": 4805, + "n_pred": 5660, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9586521586521587, + "FN": 506, + "FP": 83, + "IoU": 0.9205878387488203, + "TN": 631559, + "TP": 6828, + "n_pred": 6911, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6417292259901631, + "FN": 541, + "FP": 2227, + "IoU": 0.4724604535925291, + "TN": 633729, + "TP": 2479, + "n_pred": 4706, + "n_ref": 3020 + }, + "2": { + "Dice": 0.8934240362811792, + "FN": 1048, + "FP": 456, + "IoU": 0.8073770491803278, + "TN": 631168, + "TP": 6304, + "n_pred": 6760, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9088363954505687, + "FN": 159, + "FP": 362, + "IoU": 0.8329057087876844, + "TN": 635858, + "TP": 2597, + "n_pred": 2959, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9004990751404739, + "FN": 2539, + "FP": 312, + "IoU": 0.8190071102082275, + "TN": 967288, + "TP": 12901, + "n_pred": 13213, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8463959390862944, + "FN": 1559, + "FP": 1467, + "IoU": 0.7336970870368741, + "TN": 971677, + "TP": 8337, + "n_pred": 9804, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9663732459209605, + "FN": 99, + "FP": 814, + "IoU": 0.9349344355758267, + "TN": 969008, + "TP": 13119, + "n_pred": 13933, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8866436668309512, + "FN": 791, + "FP": 589, + "IoU": 0.7963700752545374, + "TN": 976263, + "TP": 5397, + "n_pred": 5986, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8714516999460334, + "FN": 1882, + "FP": 500, + "IoU": 0.7721882172915072, + "TN": 972584, + "TP": 8074, + "n_pred": 8574, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9196066187948798, + "FN": 99, + "FP": 931, + "IoU": 0.8511775754948707, + "TN": 976119, + "TP": 5891, + "n_pred": 6822, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8526565889604353, + "FN": 3799, + "FP": 480, + "IoU": 0.743157262905162, + "TN": 1031916, + "TP": 12381, + "n_pred": 12861, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8638935108153079, + "FN": 920, + "FP": 1534, + "IoU": 0.760398359695372, + "TN": 1038334, + "TP": 7788, + "n_pred": 9322, + "n_ref": 8708 + }, + "3": { + "Dice": 0.960383283678235, + "FN": 333, + "FP": 651, + "IoU": 0.9237859189838122, + "TN": 1035665, + "TP": 11927, + "n_pred": 12578, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8497175141242937, + "FN": 542, + "FP": 1187, + "IoU": 0.7387033398821218, + "TN": 1041959, + "TP": 4888, + "n_pred": 6075, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8435863202218342, + "FN": 2108, + "FP": 938, + "IoU": 0.7294849023090586, + "TN": 1037316, + "TP": 8214, + "n_pred": 9152, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9232222117291529, + "FN": 192, + "FP": 621, + "IoU": 0.8573934397474128, + "TN": 1042875, + "TP": 4888, + "n_pred": 5509, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7000560452437968, + "FN": 4292, + "FP": 1595, + "IoU": 0.5385278670533824, + "TN": 476459, + "TP": 6870, + "n_pred": 8465, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7524752475247525, + "FN": 551, + "FP": 874, + "IoU": 0.6031746031746031, + "TN": 485625, + "TP": 2166, + "n_pred": 3040, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9479900538748446, + "FN": 76, + "FP": 426, + "IoU": 0.9011227102619658, + "TN": 484139, + "TP": 4575, + "n_pred": 5001, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7459167950693374, + "FN": 1810, + "FP": 1488, + "IoU": 0.5947905148052587, + "TN": 481077, + "TP": 4841, + "n_pred": 6329, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8255687973997833, + "FN": 693, + "FP": 434, + "IoU": 0.7029520295202952, + "TN": 485422, + "TP": 2667, + "n_pred": 3101, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8541973490427098, + "FN": 50, + "FP": 544, + "IoU": 0.7455012853470437, + "TN": 486882, + "TP": 1740, + "n_pred": 2284, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9001382752689623, + "FN": 2531, + "FP": 430, + "IoU": 0.8184104010793573, + "TN": 464174, + "TP": 13345, + "n_pred": 13775, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7844351094406368, + "FN": 971, + "FP": 979, + "IoU": 0.645325572935613, + "TN": 474982, + "TP": 3548, + "n_pred": 4527, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9378038318558765, + "FN": 401, + "FP": 469, + "IoU": 0.8828913716516354, + "TN": 473051, + "TP": 6559, + "n_pred": 7028, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8965200202270951, + "FN": 1860, + "FP": 391, + "IoU": 0.8124479253457757, + "TN": 468478, + "TP": 9751, + "n_pred": 10142, + "n_ref": 11611 + }, + "2": { + "Dice": 0.7847058823529411, + "FN": 1660, + "FP": 536, + "IoU": 0.6456921587608906, + "TN": 474282, + "TP": 4002, + "n_pred": 4538, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8308925543394481, + "FN": 111, + "FP": 986, + "IoU": 0.7107067510548524, + "TN": 476688, + "TP": 2695, + "n_pred": 3681, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6888127142411966, + "FN": 9620, + "FP": 366, + "IoU": 0.5253351078999905, + "TN": 623602, + "TP": 11052, + "n_pred": 11418, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7625707625707626, + "FN": 2196, + "FP": 2082, + "IoU": 0.616254036598493, + "TN": 633492, + "TP": 6870, + "n_pred": 8952, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9352191506258746, + "FN": 1633, + "FP": 80, + "IoU": 0.8783207842023014, + "TN": 630562, + "TP": 12365, + "n_pred": 12445, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.703655138501885, + "FN": 6746, + "FP": 486, + "IoU": 0.5427993425211785, + "TN": 628822, + "TP": 8586, + "n_pred": 9072, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8406615570794675, + "FN": 2788, + "FP": 767, + "IoU": 0.7251217814892137, + "TN": 631707, + "TP": 9378, + "n_pred": 10145, + "n_ref": 12166 + }, + "3": { + "Dice": 0.922145442579796, + "FN": 556, + "FP": 627, + "IoU": 0.855537916717548, + "TN": 636451, + "TP": 7006, + "n_pred": 7633, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8416995951022002, + "FN": 4798, + "FP": 1692, + "IoU": 0.7266677897574124, + "TN": 540736, + "TP": 17254, + "n_pred": 18946, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7352603808212893, + "FN": 1264, + "FP": 1044, + "IoU": 0.5813531652457827, + "TN": 558967, + "TP": 3205, + "n_pred": 4249, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9435629394561633, + "FN": 315, + "FP": 592, + "IoU": 0.8931558487454353, + "TN": 555991, + "TP": 7582, + "n_pred": 8174, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6694825765575502, + "FN": 1458, + "FP": 5428, + "IoU": 0.5031746031746032, + "TN": 550620, + "TP": 6974, + "n_pred": 12402, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8290894275819922, + "FN": 793, + "FP": 885, + "IoU": 0.7080723729993041, + "TN": 558732, + "TP": 4070, + "n_pred": 4955, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8724312783560182, + "FN": 183, + "FP": 773, + "IoU": 0.7737278106508876, + "TN": 560255, + "TP": 3269, + "n_pred": 4042, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6310402684563758, + "FN": 3814, + "FP": 584, + "IoU": 0.46096335335212646, + "TN": 410721, + "TP": 3761, + "n_pred": 4345, + "n_ref": 7575 + }, + "2": { + "Dice": 0.23472505091649695, + "FN": 2395, + "FP": 611, + "IoU": 0.13296798384770694, + "TN": 415413, + "TP": 461, + "n_pred": 1072, + "n_ref": 2856 + }, + "3": { + "Dice": 0.7877385772122614, + "FN": 113, + "FP": 2089, + "IoU": 0.6498091603053435, + "TN": 412592, + "TP": 4086, + "n_pred": 6175, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6837294332723949, + "FN": 1558, + "FP": 1383, + "IoU": 0.5194444444444445, + "TN": 412760, + "TP": 3179, + "n_pred": 4562, + "n_ref": 4737 + }, + "2": { + "Dice": 0.4017467248908297, + "FN": 2165, + "FP": 301, + "IoU": 0.25136612021857924, + "TN": 415586, + "TP": 828, + "n_pred": 1129, + "n_ref": 2993 + }, + "3": { + "Dice": 0.7443397785490001, + "FN": 131, + "FP": 1416, + "IoU": 0.5927875756778099, + "TN": 415081, + "TP": 2252, + "n_pred": 3668, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9391786903440622, + "FN": 873, + "FP": 771, + "IoU": 0.8853316593429588, + "TN": 482173, + "TP": 12693, + "n_pred": 13464, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8355263157894737, + "FN": 1830, + "FP": 470, + "IoU": 0.7175141242937854, + "TN": 488368, + "TP": 5842, + "n_pred": 6312, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9352561762200317, + "FN": 87, + "FP": 977, + "IoU": 0.8783861012687164, + "TN": 487761, + "TP": 7685, + "n_pred": 8662, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8893031372704557, + "FN": 2051, + "FP": 740, + "IoU": 0.8006713326667619, + "TN": 482508, + "TP": 11211, + "n_pred": 11951, + "n_ref": 13262 + }, + "2": { + "Dice": 0.7707310420076378, + "FN": 2825, + "FP": 537, + "IoU": 0.6269832464218351, + "TN": 487497, + "TP": 5651, + "n_pred": 6188, + "n_ref": 8476 + }, + "3": { + "Dice": 0.7660252761015598, + "FN": 36, + "FP": 2019, + "IoU": 0.620778741465215, + "TN": 491091, + "TP": 3364, + "n_pred": 5383, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_000/summary_cross_val.json b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_000/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..738878687cd1e7bb2444d72e904e7b743e993b8f --- /dev/null +++ b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_000/summary_cross_val.json @@ -0,0 +1,3372 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.7579649109411132, + "FN": 32.588235294117645, + "FP": 52.627450980392155, + "IoU": 0.6993251050485402, + "TN": 6304.058823529412, + "TP": 387.19607843137254, + "n_pred": 439.8235294117647, + "n_ref": 419.7843137254902 + }, + "mean": { + "1": { + "Dice": 0.7270357364348853, + "FN": 27.11764705882353, + "FP": 95.41176470588235, + "IoU": 0.6506648622498519, + "TN": 6230.64705882353, + "TP": 423.29411764705884, + "n_pred": 518.7058823529412, + "n_ref": 450.4117647058824 + }, + "2": { + "Dice": 0.5923701979026408, + "FN": 57.64705882352941, + "FP": 42.1764705882353, + "IoU": 0.5336044828541074, + "TN": 6367.823529411765, + "TP": 308.8235294117647, + "n_pred": 351.0, + "n_ref": 366.47058823529414 + }, + "3": { + "Dice": 0.9544887984858135, + "FN": 13.0, + "FP": 20.294117647058822, + "IoU": 0.9137059700416612, + "TN": 6313.705882352941, + "TP": 429.47058823529414, + "n_pred": 449.7647058823529, + "n_ref": 442.47058823529414 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 282, + "IoU": 0.0, + "TN": 6118, + "TP": 0, + "n_pred": 282, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8932639114871461, + "FN": 335, + "FP": 321, + "IoU": 0.8071155542487504, + "TN": 9399, + "TP": 2745, + "n_pred": 3066, + "n_ref": 3080 + }, + "2": { + "Dice": 0.8587786259541985, + "FN": 641, + "FP": 25, + "IoU": 0.7525083612040134, + "TN": 10109, + "TP": 2025, + "n_pred": 2050, + "n_ref": 2666 + }, + "3": { + "Dice": 0.9503429355281207, + "FN": 18, + "FP": 163, + "IoU": 0.9053842132775745, + "TN": 10887, + "TP": 1732, + "n_pred": 1895, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.768, + "FN": 16, + "FP": 13, + "IoU": 0.6233766233766234, + "TN": 6323, + "TP": 48, + "n_pred": 61, + "n_ref": 64 + }, + "2": { + "Dice": 0.8808967772069126, + "FN": 129, + "FP": 126, + "IoU": 0.7871452420701168, + "TN": 5202, + "TP": 943, + "n_pred": 1069, + "n_ref": 1072 + }, + "3": { + "Dice": 0.967032967032967, + "FN": 30, + "FP": 108, + "IoU": 0.9361702127659575, + "TN": 4238, + "TP": 2024, + "n_pred": 2132, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8171997458165643, + "FN": 68, + "FP": 795, + "IoU": 0.6909025787965616, + "TN": 3608, + "TP": 1929, + "n_pred": 2724, + "n_ref": 1997 + }, + "2": { + "Dice": 0.8858536585365854, + "FN": 124, + "FP": 110, + "IoU": 0.7950963222416813, + "TN": 5258, + "TP": 908, + "n_pred": 1018, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9223861449647209, + "FN": 87, + "FP": 34, + "IoU": 0.8559523809523809, + "TN": 5560, + "TP": 719, + "n_pred": 753, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 321, + "IoU": 0.0, + "TN": 6079, + "TP": 0, + "n_pred": 321, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9680881107031912, + "FN": 38, + "FP": 75, + "IoU": 0.9381499726327313, + "TN": 4573, + "TP": 1714, + "n_pred": 1789, + "n_ref": 1752 + }, + "2": { + "Dice": 0.9286921257181481, + "FN": 86, + "FP": 125, + "IoU": 0.8668769716088328, + "TN": 4815, + "TP": 1374, + "n_pred": 1499, + "n_ref": 1460 + }, + "3": { + "Dice": 0.9781931464174455, + "FN": 86, + "FP": 40, + "IoU": 0.9573170731707317, + "TN": 3448, + "TP": 2826, + "n_pred": 2866, + "n_ref": 2912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9156626506024096, + "FN": 4, + "FP": 136, + "IoU": 0.8444444444444444, + "TN": 5500, + "TP": 760, + "n_pred": 896, + "n_ref": 764 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 6390, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.5724713330363183, + "FN": 45.11764705882353, + "FP": 36.568627450980394, + "IoU": 0.5055626478504784, + "TN": 5956.0, + "TP": 362.3137254901961, + "n_pred": 398.8823529411764, + "n_ref": 407.4313725490196 + }, + "mean": { + "1": { + "Dice": 0.43593195134567814, + "FN": 21.352941176470587, + "FP": 63.0, + "IoU": 0.3871973602689015, + "TN": 5888.64705882353, + "TP": 427.0, + "n_pred": 490.0, + "n_ref": 448.3529411764706 + }, + "2": { + "Dice": 0.6962965955196226, + "FN": 55.94117647058823, + "FP": 25.470588235294116, + "IoU": 0.5979452344744868, + "TN": 6106.64705882353, + "TP": 211.94117647058823, + "n_pred": 237.41176470588235, + "n_ref": 267.88235294117646 + }, + "3": { + "Dice": 0.5851854522436538, + "FN": 58.05882352941177, + "FP": 21.235294117647058, + "IoU": 0.5315453488080469, + "TN": 5872.705882352941, + "TP": 448.0, + "n_pred": 469.2352941176471, + "n_ref": 506.05882352941177 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6752347998022739, + "FN": 595, + "FP": 62, + "IoU": 0.5097014925373134, + "TN": 5060, + "TP": 683, + "n_pred": 745, + "n_ref": 1278 + }, + "3": { + "Dice": 0.7875968992248062, + "FN": 818, + "FP": 4, + "IoU": 0.649616368286445, + "TN": 4054, + "TP": 1524, + "n_pred": 1528, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7506142506142506, + "FN": 23, + "FP": 383, + "IoU": 0.6007866273352999, + "TN": 5383, + "TP": 611, + "n_pred": 994, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9760665972944849, + "FN": 115, + "FP": 46, + "IoU": 0.9532520325203252, + "TN": 2956, + "TP": 3283, + "n_pred": 3329, + "n_ref": 3398 + }, + "2": { + "Dice": 0.9052631578947369, + "FN": 21, + "FP": 78, + "IoU": 0.8269230769230769, + "TN": 5828, + "TP": 473, + "n_pred": 551, + "n_ref": 494 + }, + "3": { + "Dice": 0.7627118644067796, + "FN": 56, + "FP": 0, + "IoU": 0.6164383561643836, + "TN": 6254, + "TP": 90, + "n_pred": 90, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 6392, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7096774193548387, + "FN": 2, + "FP": 16, + "IoU": 0.55, + "TN": 6360, + "TP": 22, + "n_pred": 38, + "n_ref": 24 + }, + "2": { + "Dice": 0.9123554473524041, + "FN": 189, + "FP": 99, + "IoU": 0.8388360380526021, + "TN": 4613, + "TP": 1499, + "n_pred": 1598, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9751861042183623, + "FN": 85, + "FP": 135, + "IoU": 0.9515738498789347, + "TN": 1857, + "TP": 4323, + "n_pred": 4458, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9067909454061251, + "FN": 101, + "FP": 39, + "IoU": 0.8294762484774665, + "TN": 5579, + "TP": 681, + "n_pred": 720, + "n_ref": 782 + }, + "3": { + "Dice": 0.9856178456119753, + "FN": 4, + "FP": 45, + "IoU": 0.9716435185185185, + "TN": 4672, + "TP": 1679, + "n_pred": 1724, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 19, + "IoU": 0.0, + "TN": 6381, + "TP": 0, + "n_pred": 19, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 540, + "IoU": 0.0, + "TN": 5860, + "TP": 0, + "n_pred": 540, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 18, + "IoU": 0.0, + "TN": 6382, + "TP": 0, + "n_pred": 18, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 177, + "IoU": 0.0, + "TN": 6223, + "TP": 0, + "n_pred": 177, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.07407407407407407, + "FN": 125, + "FP": 0, + "IoU": 0.038461538461538464, + "TN": 6270, + "TP": 5, + "n_pred": 5, + "n_ref": 130 + }, + "2": { + "Dice": 0.8181818181818182, + "FN": 38, + "FP": 34, + "IoU": 0.6923076923076923, + "TN": 6166, + "TP": 162, + "n_pred": 196, + "n_ref": 200 + }, + "3": { + "Dice": 0.0, + "FN": 24, + "FP": 0, + "IoU": 0.0, + "TN": 6376, + "TP": 0, + "n_pred": 0, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.977023269427777, + "FN": 98, + "FP": 59, + "IoU": 0.9550786838340486, + "TN": 2905, + "TP": 3338, + "n_pred": 3397, + "n_ref": 3436 + }, + "2": { + "Dice": 0.65625, + "FN": 7, + "FP": 103, + "IoU": 0.4883720930232558, + "TN": 6185, + "TP": 105, + "n_pred": 208, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.7932933117936803, + "FN": 63.1764705882353, + "FP": 28.823529411764707, + "IoU": 0.7233091937523022, + "TN": 6241.137254901961, + "TP": 443.3333333333333, + "n_pred": 472.15686274509807, + "n_ref": 506.5098039215686 + }, + "mean": { + "1": { + "Dice": 0.7474992754417161, + "FN": 80.3529411764706, + "FP": 15.058823529411764, + "IoU": 0.6851571229366168, + "TN": 6348.470588235294, + "TP": 332.5882352941176, + "n_pred": 347.6470588235294, + "n_ref": 412.94117647058823 + }, + "2": { + "Dice": 0.8417163093004207, + "FN": 55.35294117647059, + "FP": 59.1764705882353, + "IoU": 0.7429657930530447, + "TN": 6315.764705882353, + "TP": 346.1764705882353, + "n_pred": 405.3529411764706, + "n_ref": 401.52941176470586 + }, + "3": { + "Dice": 0.790664350638904, + "FN": 53.8235294117647, + "FP": 12.235294117647058, + "IoU": 0.741804665267245, + "TN": 6059.176470588235, + "TP": 651.2352941176471, + "n_pred": 663.4705882352941, + "n_ref": 705.0588235294117 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5236552171095269, + "FN": 476, + "FP": 259, + "IoU": 0.3546971027216857, + "TN": 5261, + "TP": 404, + "n_pred": 663, + "n_ref": 880 + }, + "3": { + "Dice": 0.8760932944606414, + "FN": 680, + "FP": 0, + "IoU": 0.7795071335927367, + "TN": 3316, + "TP": 2404, + "n_pred": 2404, + "n_ref": 3084 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 48, + "FP": 0, + "IoU": 0.0, + "TN": 6352, + "TP": 0, + "n_pred": 0, + "n_ref": 48 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8417721518987342, + "FN": 7, + "FP": 43, + "IoU": 0.726775956284153, + "TN": 6217, + "TP": 133, + "n_pred": 176, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 12798, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + }, + "2": { + "Dice": 0.9104303993796045, + "FN": 124, + "FP": 107, + "IoU": 0.8355871886120997, + "TN": 11395, + "TP": 1174, + "n_pred": 1281, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9779179810725552, + "FN": 51, + "FP": 96, + "IoU": 0.9567901234567902, + "TN": 9398, + "TP": 3255, + "n_pred": 3351, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 6399, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8152260111022998, + "FN": 447, + "FP": 19, + "IoU": 0.6880856760374833, + "TN": 4906, + "TP": 1028, + "n_pred": 1047, + "n_ref": 1475 + }, + "2": { + "Dice": 0.8908296943231441, + "FN": 62, + "FP": 88, + "IoU": 0.8031496062992126, + "TN": 5638, + "TP": 612, + "n_pred": 700, + "n_ref": 674 + }, + "3": { + "Dice": 0.9712070874861573, + "FN": 24, + "FP": 28, + "IoU": 0.9440258342303552, + "TN": 5471, + "TP": 877, + "n_pred": 905, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9159978598180846, + "FN": 113, + "FP": 44, + "IoU": 0.8450148075024679, + "TN": 5387, + "TP": 856, + "n_pred": 900, + "n_ref": 969 + }, + "3": { + "Dice": 0.9835586408476434, + "FN": 19, + "FP": 26, + "IoU": 0.9676491732566499, + "TN": 5009, + "TP": 1346, + "n_pred": 1372, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9752400202122284, + "FN": 35, + "FP": 63, + "IoU": 0.9516765285996055, + "TN": 4372, + "TP": 1930, + "n_pred": 1993, + "n_ref": 1965 + }, + "2": { + "Dice": 0.9075227599425012, + "FN": 70, + "FP": 123, + "IoU": 0.8307017543859649, + "TN": 5260, + "TP": 947, + "n_pred": 1070, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9851253718657034, + "FN": 53, + "FP": 17, + "IoU": 0.9706867671691792, + "TN": 4012, + "TP": 2318, + "n_pred": 2335, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8260760130883463, + "FN": 679, + "FP": 12, + "IoU": 0.7036878216123499, + "TN": 4068, + "TP": 1641, + "n_pred": 1653, + "n_ref": 2320 + }, + "2": { + "Dice": 0.8421052631578947, + "FN": 32, + "FP": 79, + "IoU": 0.7272727272727273, + "TN": 5993, + "TP": 296, + "n_pred": 375, + "n_ref": 328 + }, + "3": { + "Dice": 0.58, + "FN": 42, + "FP": 0, + "IoU": 0.4084507042253521, + "TN": 6329, + "TP": 29, + "n_pred": 29, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8684536082474227, + "FN": 157, + "FP": 162, + "IoU": 0.7674927113702624, + "TN": 5028, + "TP": 1053, + "n_pred": 1215, + "n_ref": 1210 + }, + "2": { + "Dice": 0.9014171287738756, + "FN": 57, + "FP": 263, + "IoU": 0.820527201346046, + "TN": 4617, + "TP": 1463, + "n_pred": 1726, + "n_ref": 1520 + }, + "3": { + "Dice": 0.9514124293785311, + "FN": 46, + "FP": 40, + "IoU": 0.9073275862068966, + "TN": 5472, + "TP": 842, + "n_pred": 882, + "n_ref": 888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.7041932761421682, + "FN": 79.25925925925925, + "FP": 96.75925925925925, + "IoU": 0.6213603338452858, + "TN": 6338.444444444445, + "TP": 596.6481481481482, + "n_pred": 693.4074074074074, + "n_ref": 675.9074074074074 + }, + "mean": { + "1": { + "Dice": 0.5347780257895773, + "FN": 80.27777777777777, + "FP": 84.83333333333333, + "IoU": 0.4483389064737804, + "TN": 6614.388888888889, + "TP": 331.6111111111111, + "n_pred": 416.44444444444446, + "n_ref": 411.8888888888889 + }, + "2": { + "Dice": 0.6596144582979716, + "FN": 102.55555555555556, + "FP": 104.94444444444444, + "IoU": 0.5572638929844975, + "TN": 6423.555555555556, + "TP": 480.05555555555554, + "n_pred": 585.0, + "n_ref": 582.6111111111111 + }, + "3": { + "Dice": 0.9181873443389558, + "FN": 54.94444444444444, + "FP": 100.5, + "IoU": 0.8584782020775795, + "TN": 5977.388888888889, + "TP": 978.2777777777778, + "n_pred": 1078.7777777777778, + "n_ref": 1033.2222222222222 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.34782608695652173, + "FN": 12, + "FP": 3, + "IoU": 0.21052631578947367, + "TN": 6381, + "TP": 4, + "n_pred": 7, + "n_ref": 16 + }, + "2": { + "Dice": 0.7719654647028948, + "FN": 112, + "FP": 337, + "IoU": 0.6286186931348222, + "TN": 5191, + "TP": 760, + "n_pred": 1097, + "n_ref": 872 + }, + "3": { + "Dice": 0.9554352353186173, + "FN": 211, + "FP": 3, + "IoU": 0.9146730462519936, + "TN": 3892, + "TP": 2294, + "n_pred": 2297, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8603104212860311, + "FN": 143, + "FP": 172, + "IoU": 0.754863813229572, + "TN": 5115, + "TP": 970, + "n_pred": 1142, + "n_ref": 1113 + }, + "3": { + "Dice": 0.9757071547420965, + "FN": 14, + "FP": 132, + "IoU": 0.9525666016894087, + "TN": 3322, + "TP": 2932, + "n_pred": 3064, + "n_ref": 2946 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 34, + "IoU": 0.0, + "TN": 6366, + "TP": 0, + "n_pred": 34, + "n_ref": 0 + }, + "2": { + "Dice": 0.82312713708424, + "FN": 415, + "FP": 154, + "IoU": 0.699418911780243, + "TN": 4507, + "TP": 1324, + "n_pred": 1478, + "n_ref": 1739 + }, + "3": { + "Dice": 0.7823550856726212, + "FN": 44, + "FP": 553, + "IoU": 0.6425149700598802, + "TN": 4730, + "TP": 1073, + "n_pred": 1626, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.743321718931475, + "FN": 65, + "FP": 156, + "IoU": 0.5914972273567468, + "TN": 5859, + "TP": 320, + "n_pred": 476, + "n_ref": 385 + }, + "2": { + "Dice": 0.8791836734693877, + "FN": 134, + "FP": 162, + "IoU": 0.7844136926438456, + "TN": 5027, + "TP": 1077, + "n_pred": 1239, + "n_ref": 1211 + }, + "3": { + "Dice": 0.9636934110264456, + "FN": 82, + "FP": 80, + "IoU": 0.9299307958477508, + "TN": 4088, + "TP": 2150, + "n_pred": 2230, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9607766990291262, + "FN": 138, + "FP": 64, + "IoU": 0.9245142002989537, + "TN": 3724, + "TP": 2474, + "n_pred": 2538, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9402099497946144, + "FN": 34, + "FP": 97, + "IoU": 0.8871662360034454, + "TN": 5239, + "TP": 1030, + "n_pred": 1127, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9889064976228209, + "FN": 6, + "FP": 29, + "IoU": 0.9780564263322884, + "TN": 4805, + "TP": 1560, + "n_pred": 1589, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7465564738292011, + "FN": 57, + "FP": 127, + "IoU": 0.5956043956043956, + "TN": 5945, + "TP": 271, + "n_pred": 398, + "n_ref": 328 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 6389, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9533116178067318, + "FN": 89, + "FP": 40, + "IoU": 0.9107883817427386, + "TN": 4954, + "TP": 1317, + "n_pred": 1357, + "n_ref": 1406 + }, + "2": { + "Dice": 0.7570370370370371, + "FN": 160, + "FP": 168, + "IoU": 0.6090584028605482, + "TN": 5561, + "TP": 511, + "n_pred": 679, + "n_ref": 671 + }, + "3": { + "Dice": 0.9537037037037037, + "FN": 0, + "FP": 160, + "IoU": 0.911504424778761, + "TN": 4592, + "TP": 1648, + "n_pred": 1808, + "n_ref": 1648 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8786127167630058, + "FN": 15, + "FP": 27, + "IoU": 0.7835051546391752, + "TN": 6206, + "TP": 152, + "n_pred": 179, + "n_ref": 167 + }, + "2": { + "Dice": 0.5128205128205128, + "FN": 16, + "FP": 3, + "IoU": 0.3448275862068966, + "TN": 6371, + "TP": 10, + "n_pred": 13, + "n_ref": 26 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.575682382133995, + "FN": 774, + "FP": 81, + "IoU": 0.40418118466898956, + "TN": 11365, + "TP": 580, + "n_pred": 661, + "n_ref": 1354 + }, + "2": { + "Dice": 0.7244492596605273, + "FN": 443, + "FP": 320, + "IoU": 0.5679501698754247, + "TN": 11034, + "TP": 1003, + "n_pred": 1323, + "n_ref": 1446 + }, + "3": { + "Dice": 0.9124246698294654, + "FN": 442, + "FP": 241, + "IoU": 0.8389530771044565, + "TN": 8559, + "TP": 3558, + "n_pred": 3799, + "n_ref": 4000 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 419, + "IoU": 0.0, + "TN": 5981, + "TP": 0, + "n_pred": 419, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 106, + "IoU": 0.0, + "TN": 6294, + "TP": 0, + "n_pred": 106, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6764705882352942, + "FN": 295, + "FP": 519, + "IoU": 0.5111111111111111, + "TN": 4735, + "TP": 851, + "n_pred": 1370, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7533632286995515, + "FN": 119, + "FP": 321, + "IoU": 0.60431654676259, + "TN": 5288, + "TP": 672, + "n_pred": 993, + "n_ref": 791 + }, + "3": { + "Dice": 0.7588254701418674, + "FN": 159, + "FP": 572, + "IoU": 0.6113769271664008, + "TN": 4519, + "TP": 1150, + "n_pred": 1722, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 57, + "IoU": 0.0, + "TN": 12743, + "TP": 0, + "n_pred": 57, + "n_ref": 0 + }, + "2": { + "Dice": 0.8929068150208623, + "FN": 270, + "FP": 38, + "IoU": 0.8065326633165829, + "TN": 11208, + "TP": 1284, + "n_pred": 1322, + "n_ref": 1554 + }, + "3": { + "Dice": 0.9726348709929633, + "FN": 31, + "FP": 39, + "IoU": 0.9467275494672754, + "TN": 11486, + "TP": 1244, + "n_pred": 1283, + "n_ref": 1275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.70768794029927, + "FN": 90.09803921568628, + "FP": 65.3921568627451, + "IoU": 0.6147132564519354, + "TN": 5898.1176470588225, + "TP": 346.39215686274514, + "n_pred": 411.7843137254902, + "n_ref": 436.4901960784314 + }, + "mean": { + "1": { + "Dice": 0.6181673600026949, + "FN": 117.58823529411765, + "FP": 88.82352941176471, + "IoU": 0.510516220240187, + "TN": 5906.35294117647, + "TP": 287.2352941176471, + "n_pred": 376.05882352941177, + "n_ref": 404.8235294117647 + }, + "2": { + "Dice": 0.7304485648387999, + "FN": 133.58823529411765, + "FP": 55.11764705882353, + "IoU": 0.6310131805135247, + "TN": 5796.294117647059, + "TP": 415.0, + "n_pred": 470.11764705882354, + "n_ref": 548.5882352941177 + }, + "3": { + "Dice": 0.7744478960563151, + "FN": 19.11764705882353, + "FP": 52.23529411764706, + "IoU": 0.7026103686020947, + "TN": 5991.705882352941, + "TP": 336.94117647058823, + "n_pred": 389.1764705882353, + "n_ref": 356.05882352941177 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4215885947046843, + "FN": 562, + "FP": 6, + "IoU": 0.2670967741935484, + "TN": 5625, + "TP": 207, + "n_pred": 213, + "n_ref": 769 + }, + "2": { + "Dice": 0.7817622950819673, + "FN": 136, + "FP": 290, + "IoU": 0.6417157275021026, + "TN": 5211, + "TP": 763, + "n_pred": 1053, + "n_ref": 899 + }, + "3": { + "Dice": 0.9384187524831148, + "FN": 109, + "FP": 46, + "IoU": 0.8839820359281437, + "TN": 5064, + "TP": 1181, + "n_pred": 1227, + "n_ref": 1290 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8344962322076472, + "FN": 23, + "FP": 570, + "IoU": 0.7159961685823755, + "TN": 4312, + "TP": 1495, + "n_pred": 2065, + "n_ref": 1518 + }, + "2": { + "Dice": 0.9108159392789373, + "FN": 113, + "FP": 28, + "IoU": 0.8362369337979094, + "TN": 5539, + "TP": 720, + "n_pred": 748, + "n_ref": 833 + }, + "3": { + "Dice": 0.8387096774193549, + "FN": 0, + "FP": 65, + "IoU": 0.7222222222222222, + "TN": 6166, + "TP": 169, + "n_pred": 234, + "n_ref": 169 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7087857847976308, + "FN": 294, + "FP": 1, + "IoU": 0.5489296636085627, + "TN": 5746, + "TP": 359, + "n_pred": 360, + "n_ref": 653 + }, + "2": { + "Dice": 0.8030630930580989, + "FN": 901, + "FP": 282, + "IoU": 0.6709318497913769, + "TN": 2805, + "TP": 2412, + "n_pred": 2694, + "n_ref": 3313 + }, + "3": { + "Dice": 0.734229576008273, + "FN": 36, + "FP": 478, + "IoU": 0.5800653594771242, + "TN": 5176, + "TP": 710, + "n_pred": 1188, + "n_ref": 746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.37831603229527105, + "FN": 534, + "FP": 5, + "IoU": 0.2332859174964438, + "TN": 5697, + "TP": 164, + "n_pred": 169, + "n_ref": 698 + }, + "2": { + "Dice": 0.7564625850340136, + "FN": 711, + "FP": 5, + "IoU": 0.6083150984682714, + "TN": 4572, + "TP": 1112, + "n_pred": 1117, + "n_ref": 1823 + }, + "3": { + "Dice": 0.9567863664029215, + "FN": 12, + "FP": 59, + "IoU": 0.9171528588098017, + "TN": 5543, + "TP": 786, + "n_pred": 845, + "n_ref": 798 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 825, + "IoU": 0.0, + "TN": 5575, + "TP": 0, + "n_pred": 825, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 22, + "IoU": 0.0, + "TN": 6378, + "TP": 0, + "n_pred": 22, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 97, + "IoU": 0.0, + "TN": 6303, + "TP": 0, + "n_pred": 97, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9256281407035176, + "FN": 282, + "FP": 14, + "IoU": 0.8615528531337698, + "TN": 4262, + "TP": 1842, + "n_pred": 1856, + "n_ref": 2124 + }, + "2": { + "Dice": 0.9212410501193318, + "FN": 15, + "FP": 51, + "IoU": 0.8539823008849557, + "TN": 5948, + "TP": 386, + "n_pred": 437, + "n_ref": 401 + }, + "3": { + "Dice": 0.8216216216216217, + "FN": 33, + "FP": 0, + "IoU": 0.6972477064220184, + "TN": 6291, + "TP": 76, + "n_pred": 76, + "n_ref": 109 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7639366827253957, + "FN": 263, + "FP": 80, + "IoU": 0.6180400890868597, + "TN": 5502, + "TP": 555, + "n_pred": 635, + "n_ref": 818 + }, + "2": { + "Dice": 0.8700396825396826, + "FN": 130, + "FP": 132, + "IoU": 0.7699736611062336, + "TN": 5261, + "TP": 877, + "n_pred": 1009, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9473684210526315, + "FN": 15, + "FP": 143, + "IoU": 0.9, + "TN": 4820, + "TP": 1422, + "n_pred": 1565, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9125874125874126, + "FN": 41, + "FP": 9, + "IoU": 0.8392282958199357, + "TN": 6089, + "TP": 261, + "n_pred": 270, + "n_ref": 302 + }, + "2": { + "Dice": 0.800203873598369, + "FN": 265, + "FP": 127, + "IoU": 0.6669498725573492, + "TN": 5223, + "TP": 785, + "n_pred": 912, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9584487534626038, + "FN": 120, + "FP": 0, + "IoU": 0.9202127659574468, + "TN": 4896, + "TP": 1384, + "n_pred": 1384, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847300/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.70712215444251, + "FN": 62.0479302832244, + "FP": 56.03420479302832, + "IoU": 0.6328541073897084, + "TN": 6147.551633986928, + "TP": 427.17668845315904, + "n_pred": 483.2108932461873, + "n_ref": 489.2246187363835 + }, + "mean": { + "1": { + "Dice": 0.6126824698029104, + "FN": 65.33790849673203, + "FP": 69.42549019607843, + "IoU": 0.5363748944338674, + "TN": 6197.701307189542, + "TP": 360.3457516339869, + "n_pred": 429.7712418300654, + "n_ref": 425.683660130719 + }, + "2": { + "Dice": 0.7040892251718912, + "FN": 81.01699346405228, + "FP": 57.377124183006536, + "IoU": 0.6125585167759323, + "TN": 6202.016993464053, + "TP": 352.3993464052288, + "n_pred": 409.7764705882353, + "n_ref": 433.4163398692811 + }, + "3": { + "Dice": 0.8045947683527285, + "FN": 39.78888888888889, + "FP": 41.3, + "IoU": 0.7496289109593255, + "TN": 6042.93660130719, + "TP": 568.7849673202614, + "n_pred": 610.0849673202614, + "n_ref": 608.5738562091503 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_001/summary.json b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_001/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..1491d8c341c0d0afb8b09b5f40d44f5baf0d38a0 --- /dev/null +++ b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_001/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8847677745927873, + "FN": 1052.8066666666666, + "FP": 930.0133333333333, + "IoU": 0.8008117553562922, + "TN": 843304.5133333333, + "TP": 9141.306666666665, + "n_pred": 10071.320000000002, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8640840890999142, + "FN": 1250.86, + "FP": 1034.34, + "IoU": 0.7681569837827767, + "TN": 843540.24, + "TP": 8603.2, + "n_pred": 9637.54, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8585762759345849, + "FN": 1327.38, + "FP": 1239.64, + "IoU": 0.7571851847825792, + "TN": 843133.5, + "TP": 8728.12, + "n_pred": 9967.76, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9316429587438629, + "FN": 580.18, + "FP": 516.06, + "IoU": 0.8770930975035205, + "TN": 843239.8, + "TP": 10092.6, + "n_pred": 10608.66, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9321917218827984, + "FN": 613, + "FP": 963, + "IoU": 0.872995406559755, + "TN": 1093511, + "TP": 10833, + "n_pred": 11796, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8455953533397871, + "FN": 1227, + "FP": 3239, + "IoU": 0.7324947589098533, + "TN": 1089225, + "TP": 12229, + "n_pred": 15468, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9425324675324676, + "FN": 984, + "FP": 1848, + "IoU": 0.8913110224132638, + "TN": 1079864, + "TP": 23224, + "n_pred": 25072, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8212667749380289, + "FN": 74, + "FP": 2017, + "IoU": 0.6967367657722988, + "TN": 1099025, + "TP": 4804, + "n_pred": 6821, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8830996169795194, + "FN": 2031, + "FP": 1662, + "IoU": 0.7906699920643918, + "TN": 1088278, + "TP": 13949, + "n_pred": 15611, + "n_ref": 15980 + }, + "3": { + "Dice": 0.955152307776143, + "FN": 954, + "FP": 692, + "IoU": 0.9141545843329508, + "TN": 1086746, + "TP": 17528, + "n_pred": 18220, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9111795357650403, + "FN": 1176, + "FP": 324, + "IoU": 0.8368501196432456, + "TN": 900246, + "TP": 7694, + "n_pred": 8018, + "n_ref": 8870 + }, + "2": { + "Dice": 0.9005434378024268, + "FN": 1689, + "FP": 983, + "IoU": 0.8190805064662469, + "TN": 894671, + "TP": 12097, + "n_pred": 13080, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9745164693470871, + "FN": 628, + "FP": 459, + "IoU": 0.9502994833340954, + "TN": 887569, + "TP": 20784, + "n_pred": 21243, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8001316547354562, + "FN": 2116, + "FP": 313, + "IoU": 0.6668495405294198, + "TN": 902149, + "TP": 4862, + "n_pred": 5175, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8877158638047962, + "FN": 1627, + "FP": 1585, + "IoU": 0.7981017034383053, + "TN": 893531, + "TP": 12697, + "n_pred": 14282, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9681815713742737, + "FN": 803, + "FP": 369, + "IoU": 0.9383255275482818, + "TN": 890437, + "TP": 17831, + "n_pred": 18200, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9496421213601512, + "FN": 1822, + "FP": 549, + "IoU": 0.90411291301007, + "TN": 1401033, + "TP": 22356, + "n_pred": 22905, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8805623715100471, + "FN": 1806, + "FP": 1796, + "IoU": 0.7866113744075829, + "TN": 1408880, + "TP": 13278, + "n_pred": 15074, + "n_ref": 15084 + }, + "3": { + "Dice": 0.973804937143765, + "FN": 759, + "FP": 560, + "IoU": 0.9489472054497601, + "TN": 1399924, + "TP": 24517, + "n_pred": 25077, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8697670737819515, + "FN": 1064, + "FP": 3873, + "IoU": 0.7695467488213602, + "TN": 1404337, + "TP": 16486, + "n_pred": 20359, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8880369605819326, + "FN": 1517, + "FP": 1900, + "IoU": 0.7986209335219236, + "TN": 1408792, + "TP": 13551, + "n_pred": 15451, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9680053547523427, + "FN": 1007, + "FP": 427, + "IoU": 0.9379945518225451, + "TN": 1402633, + "TP": 21693, + "n_pred": 22120, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9479431320611925, + "FN": 490, + "FP": 473, + "IoU": 0.9010379200493269, + "TN": 752317, + "TP": 8768, + "n_pred": 9241, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8704592186429061, + "FN": 1155, + "FP": 1302, + "IoU": 0.7706310679611651, + "TN": 751336, + "TP": 8255, + "n_pred": 9557, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9683534338885915, + "FN": 640, + "FP": 365, + "IoU": 0.9386484341615287, + "TN": 745667, + "TP": 15376, + "n_pred": 15741, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8071911928088072, + "FN": 922, + "FP": 987, + "IoU": 0.6767146486028789, + "TN": 756143, + "TP": 3996, + "n_pred": 4983, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8320546407185628, + "FN": 2345, + "FP": 1245, + "IoU": 0.7124088760714572, + "TN": 749565, + "TP": 8893, + "n_pred": 10138, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9494399297166703, + "FN": 1105, + "FP": 46, + "IoU": 0.9037464458939622, + "TN": 750090, + "TP": 10807, + "n_pred": 10853, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.926940465787774, + "FN": 1645, + "FP": 278, + "IoU": 0.8638294859085115, + "TN": 1064150, + "TP": 12199, + "n_pred": 12477, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8672012911686084, + "FN": 1273, + "FP": 1360, + "IoU": 0.7655387355298308, + "TN": 1067042, + "TP": 8597, + "n_pred": 9957, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9620570537107198, + "FN": 1137, + "FP": 225, + "IoU": 0.9268881850877664, + "TN": 1059643, + "TP": 17267, + "n_pred": 17492, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.923478054754474, + "FN": 1608, + "FP": 329, + "IoU": 0.8578348623853211, + "TN": 1064647, + "TP": 11688, + "n_pred": 12017, + "n_ref": 13296 + }, + "2": { + "Dice": 0.85764582738605, + "FN": 1787, + "FP": 1205, + "IoU": 0.7507705122865472, + "TN": 1066267, + "TP": 9013, + "n_pred": 10218, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9431190187356787, + "FN": 1232, + "FP": 456, + "IoU": 0.8923606682821069, + "TN": 1062590, + "TP": 13994, + "n_pred": 14450, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8953566621803499, + "FN": 1149, + "FP": 717, + "IoU": 0.8105391410295462, + "TN": 1096071, + "TP": 7983, + "n_pred": 8700, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8511951941929832, + "FN": 1280, + "FP": 2287, + "IoU": 0.7409397922870216, + "TN": 1092151, + "TP": 10202, + "n_pred": 12489, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8990810074880872, + "FN": 930, + "FP": 1442, + "IoU": 0.8166640902767043, + "TN": 1092982, + "TP": 10566, + "n_pred": 12008, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7974683544303798, + "FN": 910, + "FP": 178, + "IoU": 0.6631578947368421, + "TN": 1102690, + "TP": 2142, + "n_pred": 2320, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8717967846618673, + "FN": 666, + "FP": 2771, + "IoU": 0.7727302783839185, + "TN": 1090797, + "TP": 11686, + "n_pred": 14457, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7968707109525117, + "FN": 377, + "FP": 1103, + "IoU": 0.6623317362537076, + "TN": 1101537, + "TP": 2903, + "n_pred": 4006, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9016450417052827, + "FN": 1381, + "FP": 317, + "IoU": 0.8209049678303977, + "TN": 1137399, + "TP": 7783, + "n_pred": 8100, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9071227980597396, + "FN": 1650, + "FP": 1988, + "IoU": 0.8300317697626611, + "TN": 1125476, + "TP": 17766, + "n_pred": 19754, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9226948152747594, + "FN": 1528, + "FP": 215, + "IoU": 0.8564841498559078, + "TN": 1134735, + "TP": 10402, + "n_pred": 10617, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7105084745762712, + "FN": 894, + "FP": 387, + "IoU": 0.5509989484752892, + "TN": 1144027, + "TP": 1572, + "n_pred": 1959, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8579266593797552, + "FN": 4421, + "FP": 2208, + "IoU": 0.7512010208677375, + "TN": 1120236, + "TP": 20015, + "n_pred": 22223, + "n_ref": 24436 + }, + "3": { + "Dice": 0.6003957630077988, + "FN": 137, + "FP": 3296, + "IoU": 0.42897538256819695, + "TN": 1140868, + "TP": 2579, + "n_pred": 5875, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9537226775956285, + "FN": 676, + "FP": 408, + "IoU": 0.9115390892769708, + "TN": 788546, + "TP": 11170, + "n_pred": 11578, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8702227909952882, + "FN": 1154, + "FP": 1077, + "IoU": 0.7702605292966739, + "TN": 791089, + "TP": 7480, + "n_pred": 8557, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9537626798773295, + "FN": 567, + "FP": 217, + "IoU": 0.9116121758737317, + "TN": 791930, + "TP": 8086, + "n_pred": 8303, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8237082066869301, + "FN": 416, + "FP": 1092, + "IoU": 0.7002583979328165, + "TN": 795769, + "TP": 3523, + "n_pred": 4615, + "n_ref": 3939 + }, + "2": { + "Dice": 0.900797421807214, + "FN": 1751, + "FP": 650, + "IoU": 0.8195008269433168, + "TN": 787498, + "TP": 10901, + "n_pred": 11551, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8851739277271192, + "FN": 225, + "FP": 455, + "IoU": 0.794001817631021, + "TN": 797499, + "TP": 2621, + "n_pred": 3076, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9469179264167875, + "FN": 474, + "FP": 1064, + "IoU": 0.899187205034085, + "TN": 1332584, + "TP": 13718, + "n_pred": 14782, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8842979060765751, + "FN": 1125, + "FP": 1356, + "IoU": 0.7925932118374853, + "TN": 1335878, + "TP": 9481, + "n_pred": 10837, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9713635833430537, + "FN": 673, + "FP": 309, + "IoU": 0.9443215966434201, + "TN": 1330203, + "TP": 16655, + "n_pred": 16964, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7700883752549286, + "FN": 204, + "FP": 3178, + "IoU": 0.6261330975016582, + "TN": 1338794, + "TP": 5664, + "n_pred": 8842, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8750051582552717, + "FN": 1512, + "FP": 1517, + "IoU": 0.7777859291321253, + "TN": 1334209, + "TP": 10602, + "n_pred": 12119, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9564913506901974, + "FN": 670, + "FP": 326, + "IoU": 0.9166108506363028, + "TN": 1335896, + "TP": 10948, + "n_pred": 11274, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8131038647342995, + "FN": 1690, + "FP": 3262, + "IoU": 0.6850674128720428, + "TN": 836244, + "TP": 10772, + "n_pred": 14034, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8454036107076157, + "FN": 1300, + "FP": 1680, + "IoU": 0.7322070452911574, + "TN": 840840, + "TP": 8148, + "n_pred": 9828, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9675580885576501, + "FN": 832, + "FP": 352, + "IoU": 0.9371549893842888, + "TN": 833128, + "TP": 17656, + "n_pred": 18008, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8663821167619186, + "FN": 950, + "FP": 897, + "IoU": 0.7642629227823867, + "TN": 844133, + "TP": 5988, + "n_pred": 6885, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8694414799003913, + "FN": 1516, + "FP": 1420, + "IoU": 0.7690371302706105, + "TN": 839256, + "TP": 9776, + "n_pred": 11196, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9552848722986248, + "FN": 840, + "FP": 298, + "IoU": 0.9143974725440048, + "TN": 838674, + "TP": 12156, + "n_pred": 12454, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9107989026519245, + "FN": 378, + "FP": 695, + "IoU": 0.8362082124866432, + "TN": 845417, + "TP": 5478, + "n_pred": 6173, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8861626776538123, + "FN": 1149, + "FP": 1310, + "IoU": 0.7955943474646716, + "TN": 839938, + "TP": 9571, + "n_pred": 10881, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9548428022043373, + "FN": 914, + "FP": 225, + "IoU": 0.9135877399286852, + "TN": 838787, + "TP": 12042, + "n_pred": 12267, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8608830707787886, + "FN": 164, + "FP": 463, + "IoU": 0.7557460070120764, + "TN": 849401, + "TP": 1940, + "n_pred": 2403, + "n_ref": 2104 + }, + "2": { + "Dice": 0.9043946332449586, + "FN": 1329, + "FP": 1051, + "IoU": 0.8254748111754785, + "TN": 838331, + "TP": 11257, + "n_pred": 12308, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9511367492365117, + "FN": 337, + "FP": 527, + "IoU": 0.9068262698155937, + "TN": 842695, + "TP": 8409, + "n_pred": 8936, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.92914653784219, + "FN": 1548, + "FP": 212, + "IoU": 0.8676691729323308, + "TN": 783740, + "TP": 11540, + "n_pred": 11752, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8345616543834562, + "FN": 1267, + "FP": 1741, + "IoU": 0.7160924964605946, + "TN": 786445, + "TP": 7587, + "n_pred": 9328, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9483410331793364, + "FN": 1039, + "FP": 314, + "IoU": 0.9017571884984026, + "TN": 783268, + "TP": 12419, + "n_pred": 12733, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.894140625, + "FN": 801, + "FP": 825, + "IoU": 0.808548216178029, + "TN": 788547, + "TP": 6867, + "n_pred": 7692, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8677313677313677, + "FN": 1146, + "FP": 1438, + "IoU": 0.7663652802893309, + "TN": 785980, + "TP": 8476, + "n_pred": 9914, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9424018212862835, + "FN": 753, + "FP": 259, + "IoU": 0.8910773867183296, + "TN": 787749, + "TP": 8279, + "n_pred": 8538, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9054710262220783, + "FN": 1280, + "FP": 1056, + "IoU": 0.8272700384501627, + "TN": 883146, + "TP": 11188, + "n_pred": 12244, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8767908309455588, + "FN": 1158, + "FP": 1422, + "IoU": 0.7806122448979592, + "TN": 884910, + "TP": 9180, + "n_pred": 10602, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9461984933931585, + "FN": 759, + "FP": 548, + "IoU": 0.897890625, + "TN": 883870, + "TP": 11493, + "n_pred": 12041, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7972323010716396, + "FN": 1632, + "FP": 771, + "IoU": 0.6628314858986951, + "TN": 889543, + "TP": 4724, + "n_pred": 5495, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8975504941985389, + "FN": 1075, + "FP": 1309, + "IoU": 0.8141420441256724, + "TN": 883843, + "TP": 10443, + "n_pred": 11752, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9265236152982207, + "FN": 989, + "FP": 254, + "IoU": 0.8631057268722467, + "TN": 887590, + "TP": 7837, + "n_pred": 8091, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9594996229428204, + "FN": 405, + "FP": 508, + "IoU": 0.9221521145975443, + "TN": 750320, + "TP": 10815, + "n_pred": 11323, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9061067573562028, + "FN": 1220, + "FP": 685, + "IoU": 0.8283319816166531, + "TN": 750951, + "TP": 9192, + "n_pred": 9877, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9730816964094663, + "FN": 383, + "FP": 246, + "IoU": 0.947574595765961, + "TN": 750050, + "TP": 11369, + "n_pred": 11615, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8889710412815773, + "FN": 185, + "FP": 716, + "IoU": 0.8001330967169477, + "TN": 757540, + "TP": 3607, + "n_pred": 4323, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8873690210004823, + "FN": 1512, + "FP": 1057, + "IoU": 0.7975411773977461, + "TN": 749359, + "TP": 10120, + "n_pred": 11177, + "n_ref": 11632 + }, + "3": { + "Dice": 0.944482314625464, + "FN": 599, + "FP": 134, + "IoU": 0.894804822043628, + "TN": 755080, + "TP": 6235, + "n_pred": 6369, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8041109969167524, + "FN": 118, + "FP": 3694, + "IoU": 0.6723960123753867, + "TN": 983692, + "TP": 7824, + "n_pred": 11518, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8522374230119365, + "FN": 930, + "FP": 1781, + "IoU": 0.7425206572324058, + "TN": 984799, + "TP": 7818, + "n_pred": 9599, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9754705200249755, + "FN": 142, + "FP": 683, + "IoU": 0.9521156190144524, + "TN": 978099, + "TP": 16404, + "n_pred": 17087, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.706081081081081, + "FN": 316, + "FP": 2120, + "IoU": 0.5456919060052219, + "TN": 989966, + "TP": 2926, + "n_pred": 5046, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8457354221061792, + "FN": 560, + "FP": 2276, + "IoU": 0.7327049952874647, + "TN": 984718, + "TP": 7774, + "n_pred": 10050, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9237773270227632, + "FN": 367, + "FP": 1324, + "IoU": 0.8583514826604122, + "TN": 983390, + "TP": 10247, + "n_pred": 11571, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.952892912717499, + "FN": 852, + "FP": 480, + "IoU": 0.9100243177519589, + "TN": 743212, + "TP": 13472, + "n_pred": 13952, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9032147154890837, + "FN": 931, + "FP": 758, + "IoU": 0.8235109717868339, + "TN": 748446, + "TP": 7881, + "n_pred": 8639, + "n_ref": 8812 + }, + "3": { + "Dice": 0.976255627151558, + "FN": 242, + "FP": 296, + "IoU": 0.9536126918434212, + "TN": 746418, + "TP": 11060, + "n_pred": 11356, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7644663159680978, + "FN": 731, + "FP": 2045, + "IoU": 0.6187336904271391, + "TN": 750735, + "TP": 4505, + "n_pred": 6550, + "n_ref": 5236 + }, + "2": { + "Dice": 0.9176782401272198, + "FN": 676, + "FP": 877, + "IoU": 0.8478793221667157, + "TN": 747807, + "TP": 8656, + "n_pred": 9533, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9309964456428483, + "FN": 394, + "FP": 169, + "IoU": 0.8709011694565466, + "TN": 753655, + "TP": 3798, + "n_pred": 3967, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9568622416228014, + "FN": 493, + "FP": 179, + "IoU": 0.9172923076923077, + "TN": 630851, + "TP": 7453, + "n_pred": 7632, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8934626892737328, + "FN": 439, + "FP": 736, + "IoU": 0.8074401835463783, + "TN": 632874, + "TP": 4927, + "n_pred": 5663, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9630709426627794, + "FN": 397, + "FP": 135, + "IoU": 0.9287722586691659, + "TN": 631507, + "TP": 6937, + "n_pred": 7072, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7619172685489166, + "FN": 119, + "FP": 1694, + "IoU": 0.6154009333899024, + "TN": 634262, + "TP": 2901, + "n_pred": 4595, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9307280005427777, + "FN": 493, + "FP": 528, + "IoU": 0.8704314720812183, + "TN": 631096, + "TP": 6859, + "n_pred": 7387, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9229957805907173, + "FN": 131, + "FP": 307, + "IoU": 0.8570029382957884, + "TN": 635913, + "TP": 2625, + "n_pred": 2932, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9033292661669863, + "FN": 2484, + "FP": 289, + "IoU": 0.8237014431941001, + "TN": 967311, + "TP": 12956, + "n_pred": 13245, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8852908334179271, + "FN": 1175, + "FP": 1085, + "IoU": 0.794189964484109, + "TN": 972059, + "TP": 8721, + "n_pred": 9806, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9713458540568629, + "FN": 133, + "FP": 639, + "IoU": 0.9442880854441799, + "TN": 969183, + "TP": 13085, + "n_pred": 13724, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9356146610444372, + "FN": 419, + "FP": 375, + "IoU": 0.8790187414292244, + "TN": 976477, + "TP": 5769, + "n_pred": 6144, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9181065330743278, + "FN": 976, + "FP": 626, + "IoU": 0.8486108486108486, + "TN": 972458, + "TP": 8980, + "n_pred": 9606, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9465475223395613, + "FN": 164, + "FP": 494, + "IoU": 0.8985194324491055, + "TN": 976556, + "TP": 5826, + "n_pred": 6320, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9478477854023706, + "FN": 986, + "FP": 686, + "IoU": 0.9008656468635123, + "TN": 1031710, + "TP": 15194, + "n_pred": 15880, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8983290852449731, + "FN": 778, + "FP": 1017, + "IoU": 0.8154241645244216, + "TN": 1038851, + "TP": 7930, + "n_pred": 8947, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9718715752729634, + "FN": 288, + "FP": 405, + "IoU": 0.9452822739834189, + "TN": 1035911, + "TP": 11972, + "n_pred": 12377, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9100471527022126, + "FN": 412, + "FP": 580, + "IoU": 0.8349417637271215, + "TN": 1042566, + "TP": 5018, + "n_pred": 5598, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8742691495111286, + "FN": 1425, + "FP": 1134, + "IoU": 0.7766236033519553, + "TN": 1037120, + "TP": 8897, + "n_pred": 10031, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9401191558113703, + "FN": 425, + "FP": 168, + "IoU": 0.8870045731707317, + "TN": 1043328, + "TP": 4655, + "n_pred": 4823, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8660059464816651, + "FN": 2424, + "FP": 280, + "IoU": 0.7636776787274951, + "TN": 477774, + "TP": 8738, + "n_pred": 9018, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7802581095221486, + "FN": 480, + "FP": 780, + "IoU": 0.6396911638547327, + "TN": 485719, + "TP": 2237, + "n_pred": 3017, + "n_ref": 2717 + }, + "3": { + "Dice": 0.952808519523909, + "FN": 88, + "FP": 364, + "IoU": 0.9098703888334995, + "TN": 484201, + "TP": 4563, + "n_pred": 4927, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8751835535976505, + "FN": 1287, + "FP": 243, + "IoU": 0.7780678851174935, + "TN": 482322, + "TP": 5364, + "n_pred": 5607, + "n_ref": 6651 + }, + "2": { + "Dice": 0.848646110502426, + "FN": 649, + "FP": 318, + "IoU": 0.7370853724850462, + "TN": 485538, + "TP": 2711, + "n_pred": 3029, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8785282258064516, + "FN": 47, + "FP": 435, + "IoU": 0.7833707865168539, + "TN": 486991, + "TP": 1743, + "n_pred": 2178, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8861024717629726, + "FN": 2343, + "FP": 1136, + "IoU": 0.7954972960263343, + "TN": 463468, + "TP": 13533, + "n_pred": 14669, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8291255824032939, + "FN": 693, + "FP": 884, + "IoU": 0.7081251156764761, + "TN": 475077, + "TP": 3826, + "n_pred": 4710, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9511479865531793, + "FN": 311, + "FP": 372, + "IoU": 0.9068466993998909, + "TN": 473148, + "TP": 6649, + "n_pred": 7021, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8744194686977522, + "FN": 2197, + "FP": 507, + "IoU": 0.7768608681300545, + "TN": 468362, + "TP": 9414, + "n_pred": 9921, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8326773543246616, + "FN": 1325, + "FP": 418, + "IoU": 0.7133223684210527, + "TN": 474400, + "TP": 4337, + "n_pred": 4755, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8769968051118211, + "FN": 61, + "FP": 709, + "IoU": 0.7809388335704125, + "TN": 476965, + "TP": 2745, + "n_pred": 3454, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8501183855514565, + "FN": 5233, + "FP": 211, + "IoU": 0.7393094861849351, + "TN": 623757, + "TP": 15439, + "n_pred": 15650, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7846895378508647, + "FN": 2147, + "FP": 1650, + "IoU": 0.6456700261291527, + "TN": 633924, + "TP": 6919, + "n_pred": 8569, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9394202133675124, + "FN": 1538, + "FP": 69, + "IoU": 0.8857610009241487, + "TN": 630573, + "TP": 12460, + "n_pred": 12529, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8121033544877606, + "FN": 4583, + "FP": 391, + "IoU": 0.6836481587483305, + "TN": 628917, + "TP": 10749, + "n_pred": 11140, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8462160704655761, + "FN": 2751, + "FP": 671, + "IoU": 0.7334268131183298, + "TN": 631803, + "TP": 9415, + "n_pred": 10086, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9240591397849462, + "FN": 687, + "FP": 443, + "IoU": 0.8588382261086821, + "TN": 636635, + "TP": 6875, + "n_pred": 7318, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.886770184898063, + "FN": 2892, + "FP": 2001, + "IoU": 0.7965742319045441, + "TN": 540427, + "TP": 19160, + "n_pred": 21161, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7765324794144556, + "FN": 1074, + "FP": 880, + "IoU": 0.6346980744064311, + "TN": 559131, + "TP": 3395, + "n_pred": 4275, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9495169236675411, + "FN": 477, + "FP": 312, + "IoU": 0.903885978803752, + "TN": 556271, + "TP": 7420, + "n_pred": 7732, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7148321698383858, + "FN": 957, + "FP": 5007, + "IoU": 0.5562169804300915, + "TN": 551041, + "TP": 7475, + "n_pred": 12482, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8445557991439607, + "FN": 818, + "FP": 671, + "IoU": 0.7309360318033972, + "TN": 558946, + "TP": 4045, + "n_pred": 4716, + "n_ref": 4863 + }, + "3": { + "Dice": 0.91251535416951, + "FN": 109, + "FP": 532, + "IoU": 0.8391064257028112, + "TN": 560496, + "TP": 3343, + "n_pred": 3875, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7752207047460952, + "FN": 2438, + "FP": 541, + "IoU": 0.6329472646623953, + "TN": 410764, + "TP": 5137, + "n_pred": 5678, + "n_ref": 7575 + }, + "2": { + "Dice": 0.5691020131192038, + "FN": 1598, + "FP": 307, + "IoU": 0.3977236800505849, + "TN": 415717, + "TP": 1258, + "n_pred": 1565, + "n_ref": 2856 + }, + "3": { + "Dice": 0.8451492537313433, + "FN": 575, + "FP": 753, + "IoU": 0.7318255250403877, + "TN": 413928, + "TP": 3624, + "n_pred": 4377, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6641161246764937, + "FN": 1786, + "FP": 1199, + "IoU": 0.49713611859838275, + "TN": 412944, + "TP": 2951, + "n_pred": 4150, + "n_ref": 4737 + }, + "2": { + "Dice": 0.5945268435345727, + "FN": 1570, + "FP": 371, + "IoU": 0.4230083234244946, + "TN": 415516, + "TP": 1423, + "n_pred": 1794, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8341307814992025, + "FN": 291, + "FP": 541, + "IoU": 0.7154582763337893, + "TN": 415956, + "TP": 2092, + "n_pred": 2633, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9588961510530138, + "FN": 362, + "FP": 770, + "IoU": 0.9210379464285714, + "TN": 482174, + "TP": 13204, + "n_pred": 13974, + "n_ref": 13566 + }, + "2": { + "Dice": 0.9022984698946811, + "FN": 861, + "FP": 614, + "IoU": 0.8219888969345884, + "TN": 488224, + "TP": 6811, + "n_pred": 7425, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9670357805799142, + "FN": 218, + "FP": 297, + "IoU": 0.9361754864295452, + "TN": 488441, + "TP": 7554, + "n_pred": 7851, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8824897010237794, + "FN": 2444, + "FP": 437, + "IoU": 0.789692678297686, + "TN": 482811, + "TP": 10818, + "n_pred": 11255, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8943415122684026, + "FN": 1332, + "FP": 356, + "IoU": 0.8088768115942029, + "TN": 487678, + "TP": 7144, + "n_pred": 7500, + "n_ref": 8476 + }, + "3": { + "Dice": 0.927540333993773, + "FN": 123, + "FP": 389, + "IoU": 0.864871997888625, + "TN": 492721, + "TP": 3277, + "n_pred": 3666, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_001/summary_cross_val.json b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_001/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..cc0a276392208993f69c200ac2e9165a247e0088 --- /dev/null +++ b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_001/summary_cross_val.json @@ -0,0 +1,5280 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8658093047375931, + "FN": 170.57142857142856, + "FP": 145.23809523809527, + "IoU": 0.7865762180206745, + "TN": 9592.29761904762, + "TP": 1520.464285714286, + "n_pred": 1665.702380952381, + "n_ref": 1691.0357142857144 + }, + "mean": { + "1": { + "Dice": 0.846863071036514, + "FN": 217.5, + "FP": 182.5, + "IoU": 0.7754817360630417, + "TN": 8998.75, + "TP": 2029.8214285714287, + "n_pred": 2212.3214285714284, + "n_ref": 2247.3214285714284 + }, + "2": { + "Dice": 0.866060054207689, + "FN": 190.89285714285714, + "FP": 135.10714285714286, + "IoU": 0.7709191917184909, + "TN": 9882.357142857143, + "TP": 1220.2142857142858, + "n_pred": 1355.3214285714287, + "n_ref": 1411.107142857143 + }, + "3": { + "Dice": 0.8845047889685763, + "FN": 103.32142857142857, + "FP": 118.10714285714286, + "IoU": 0.8133277262804905, + "TN": 9895.785714285714, + "TP": 1311.357142857143, + "n_pred": 1429.4642857142858, + "n_ref": 1414.6785714285713 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 25600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8428184281842819, + "FN": 190, + "FP": 274, + "IoU": 0.7283372365339579, + "TN": 23892, + "TP": 1244, + "n_pred": 1518, + "n_ref": 1434 + }, + "3": { + "Dice": 0.9804306656379322, + "FN": 105, + "FP": 174, + "IoU": 0.9616125481563016, + "TN": 18332, + "TP": 6989, + "n_pred": 7163, + "n_ref": 7094 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 481, + "IoU": 0.0, + "TN": 5919, + "TP": 0, + "n_pred": 481, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9802718106093818, + "FN": 44, + "FP": 91, + "IoU": 0.9613069647463457, + "TN": 2911, + "TP": 3354, + "n_pred": 3445, + "n_ref": 3398 + }, + "2": { + "Dice": 0.935672514619883, + "FN": 14, + "FP": 52, + "IoU": 0.8791208791208791, + "TN": 5854, + "TP": 480, + "n_pred": 532, + "n_ref": 494 + }, + "3": { + "Dice": 0.8467153284671532, + "FN": 30, + "FP": 12, + "IoU": 0.7341772151898734, + "TN": 6242, + "TP": 116, + "n_pred": 128, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9433497536945813, + "FN": 16, + "FP": 352, + "IoU": 0.8927738927738927, + "TN": 9368, + "TP": 3064, + "n_pred": 3416, + "n_ref": 3080 + }, + "2": { + "Dice": 0.8869096934548467, + "FN": 525, + "FP": 21, + "IoU": 0.7967994045403796, + "TN": 10113, + "TP": 2141, + "n_pred": 2162, + "n_ref": 2666 + }, + "3": { + "Dice": 0.9717324377273999, + "FN": 14, + "FP": 87, + "IoU": 0.945019052803484, + "TN": 10963, + "TP": 1736, + "n_pred": 1823, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9877092050209205, + "FN": 47, + "FP": 47, + "IoU": 0.9757168690260914, + "TN": 8929, + "TP": 3777, + "n_pred": 3824, + "n_ref": 3824 + }, + "2": { + "Dice": 0.9317443120260022, + "FN": 157, + "FP": 95, + "IoU": 0.8722109533468559, + "TN": 10828, + "TP": 1720, + "n_pred": 1815, + "n_ref": 1877 + }, + "3": { + "Dice": 0.9872587359656869, + "FN": 13, + "FP": 88, + "IoU": 0.9748380667663179, + "TN": 8786, + "TP": 3913, + "n_pred": 4001, + "n_ref": 3926 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7564625850340136, + "FN": 86, + "FP": 93, + "IoU": 0.6083150984682714, + "TN": 25143, + "TP": 278, + "n_pred": 371, + "n_ref": 364 + }, + "2": { + "Dice": 0.9063117217689995, + "FN": 655, + "FP": 436, + "IoU": 0.8286746231155779, + "TN": 19232, + "TP": 5277, + "n_pred": 5713, + "n_ref": 5932 + }, + "3": { + "Dice": 0.5040946314831665, + "FN": 154, + "FP": 936, + "IoU": 0.33698296836982966, + "TN": 23956, + "TP": 554, + "n_pred": 1490, + "n_ref": 708 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9489164086687306, + "FN": 102, + "FP": 30, + "IoU": 0.9027982326951399, + "TN": 11442, + "TP": 1226, + "n_pred": 1256, + "n_ref": 1328 + }, + "2": { + "Dice": 0.9443907156673114, + "FN": 185, + "FP": 45, + "IoU": 0.8946404031149794, + "TN": 10617, + "TP": 1953, + "n_pred": 1998, + "n_ref": 2138 + }, + "3": { + "Dice": 0.9483834373227453, + "FN": 22, + "FP": 69, + "IoU": 0.9018338727076591, + "TN": 11873, + "TP": 836, + "n_pred": 905, + "n_ref": 858 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6092045756850226, + "FN": 1353, + "FP": 116, + "IoU": 0.43802601377199696, + "TN": 10186, + "TP": 1145, + "n_pred": 1261, + "n_ref": 2498 + }, + "2": { + "Dice": 0.9025787965616046, + "FN": 158, + "FP": 114, + "IoU": 0.8224543080939948, + "TN": 11268, + "TP": 1260, + "n_pred": 1374, + "n_ref": 1418 + }, + "3": { + "Dice": 0.9630032644178455, + "FN": 53, + "FP": 15, + "IoU": 0.9286463798530955, + "TN": 11847, + "TP": 885, + "n_pred": 900, + "n_ref": 938 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8028207214537565, + "FN": 566, + "FP": 161, + "IoU": 0.6705935659265972, + "TN": 10593, + "TP": 1480, + "n_pred": 1641, + "n_ref": 2046 + }, + "2": { + "Dice": 0.9253095459992011, + "FN": 316, + "FP": 245, + "IoU": 0.8610009910802775, + "TN": 8764, + "TP": 3475, + "n_pred": 3720, + "n_ref": 3791 + }, + "3": { + "Dice": 0.9719704364802677, + "FN": 155, + "FP": 46, + "IoU": 0.9454693434617472, + "TN": 9114, + "TP": 3485, + "n_pred": 3531, + "n_ref": 3640 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7520325203252033, + "FN": 15, + "FP": 229, + "IoU": 0.6026058631921825, + "TN": 5786, + "TP": 370, + "n_pred": 599, + "n_ref": 385 + }, + "2": { + "Dice": 0.8448788780280493, + "FN": 217, + "FP": 148, + "IoU": 0.731420161883738, + "TN": 5041, + "TP": 994, + "n_pred": 1142, + "n_ref": 1211 + }, + "3": { + "Dice": 0.9500434404865334, + "FN": 45, + "FP": 185, + "IoU": 0.9048407116259827, + "TN": 3983, + "TP": 2187, + "n_pred": 2372, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9084542271135568, + "FN": 118, + "FP": 65, + "IoU": 0.8322639780018332, + "TN": 5309, + "TP": 908, + "n_pred": 973, + "n_ref": 1026 + }, + "2": { + "Dice": 0.8218997361477572, + "FN": 257, + "FP": 13, + "IoU": 0.6976483762597985, + "TN": 5507, + "TP": 623, + "n_pred": 636, + "n_ref": 880 + }, + "3": { + "Dice": 0.9525504151838672, + "FN": 49, + "FP": 31, + "IoU": 0.9093997734994338, + "TN": 5517, + "TP": 803, + "n_pred": 834, + "n_ref": 852 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8120218579234972, + "FN": 317, + "FP": 27, + "IoU": 0.6835326586936522, + "TN": 5313, + "TP": 743, + "n_pred": 770, + "n_ref": 1060 + }, + "2": { + "Dice": 0.8067146282973621, + "FN": 367, + "FP": 36, + "IoU": 0.6760450160771704, + "TN": 5156, + "TP": 841, + "n_pred": 877, + "n_ref": 1208 + }, + "3": { + "Dice": 0.5598259608411893, + "FN": 1204, + "FP": 10, + "IoU": 0.38872104733131924, + "TN": 4414, + "TP": 772, + "n_pred": 782, + "n_ref": 1976 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7045454545454546, + "FN": 89, + "FP": 301, + "IoU": 0.543859649122807, + "TN": 11945, + "TP": 465, + "n_pred": 766, + "n_ref": 554 + }, + "3": { + "Dice": 0.691415313225058, + "FN": 0, + "FP": 266, + "IoU": 0.5283687943262412, + "TN": 12236, + "TP": 298, + "n_pred": 564, + "n_ref": 298 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.95932382461701, + "FN": 40, + "FP": 37, + "IoU": 0.9218274111675127, + "TN": 5415, + "TP": 908, + "n_pred": 945, + "n_ref": 948 + }, + "2": { + "Dice": 0.8585812356979405, + "FN": 14, + "FP": 295, + "IoU": 0.7522052927024859, + "TN": 5153, + "TP": 938, + "n_pred": 1233, + "n_ref": 952 + }, + "3": { + "Dice": 0.931924882629108, + "FN": 34, + "FP": 82, + "IoU": 0.8725274725274725, + "TN": 5490, + "TP": 794, + "n_pred": 876, + "n_ref": 828 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9782901056676273, + "FN": 66, + "FP": 47, + "IoU": 0.9575028206092516, + "TN": 3741, + "TP": 2546, + "n_pred": 2593, + "n_ref": 2612 + }, + "2": { + "Dice": 0.94361750112765, + "FN": 18, + "FP": 107, + "IoU": 0.8932536293766012, + "TN": 5229, + "TP": 1046, + "n_pred": 1153, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9904092071611253, + "FN": 17, + "FP": 13, + "IoU": 0.981000633312223, + "TN": 4821, + "TP": 1549, + "n_pred": 1562, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8806117414898865, + "FN": 212, + "FP": 272, + "IoU": 0.7866901718818863, + "TN": 16931, + "TP": 1785, + "n_pred": 2057, + "n_ref": 1997 + }, + "2": { + "Dice": 0.8792096991468343, + "FN": 95, + "FP": 174, + "IoU": 0.7844551282051282, + "TN": 17952, + "TP": 979, + "n_pred": 1153, + "n_ref": 1074 + }, + "3": { + "Dice": 0.9066843150231635, + "FN": 121, + "FP": 20, + "IoU": 0.8292978208232445, + "TN": 18374, + "TP": 685, + "n_pred": 705, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9709351305812974, + "FN": 186, + "FP": 90, + "IoU": 0.9435120753172329, + "TN": 7914, + "TP": 4610, + "n_pred": 4700, + "n_ref": 4796 + }, + "2": { + "Dice": 0.9063763608087092, + "FN": 170, + "FP": 131, + "IoU": 0.8287827076222981, + "TN": 11042, + "TP": 1457, + "n_pred": 1588, + "n_ref": 1627 + }, + "3": { + "Dice": 0.9556428972487366, + "FN": 31, + "FP": 127, + "IoU": 0.9150537634408602, + "TN": 10940, + "TP": 1702, + "n_pred": 1829, + "n_ref": 1733 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.966824644549763, + "FN": 10, + "FP": 18, + "IoU": 0.9357798165137615, + "TN": 5964, + "TP": 408, + "n_pred": 426, + "n_ref": 418 + }, + "2": { + "Dice": 0.838260278627251, + "FN": 891, + "FP": 61, + "IoU": 0.7215560105293946, + "TN": 2981, + "TP": 2467, + "n_pred": 2528, + "n_ref": 3358 + }, + "3": { + "Dice": 0.8224527150701647, + "FN": 544, + "FP": 38, + "IoU": 0.6984455958549223, + "TN": 4470, + "TP": 1348, + "n_pred": 1386, + "n_ref": 1892 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8013186813186813, + "FN": 310, + "FP": 594, + "IoU": 0.6685001833516685, + "TN": 3673, + "TP": 1823, + "n_pred": 2417, + "n_ref": 2133 + }, + "2": { + "Dice": 0.6028880866425993, + "FN": 25, + "FP": 195, + "IoU": 0.4315245478036176, + "TN": 6013, + "TP": 167, + "n_pred": 362, + "n_ref": 192 + }, + "3": { + "Dice": 0.7688345138441726, + "FN": 12, + "FP": 347, + "IoU": 0.6244769874476988, + "TN": 5444, + "TP": 597, + "n_pred": 944, + "n_ref": 609 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9497426099877939, + "FN": 884, + "FP": 63, + "IoU": 0.9042950985346134, + "TN": 9305, + "TP": 8948, + "n_pred": 9011, + "n_ref": 9832 + }, + "2": { + "Dice": 0.8452030606238964, + "FN": 138, + "FP": 125, + "IoU": 0.7319062181447502, + "TN": 18219, + "TP": 718, + "n_pred": 843, + "n_ref": 856 + }, + "3": { + "Dice": 0.926829268292683, + "FN": 19, + "FP": 38, + "IoU": 0.8636363636363636, + "TN": 18782, + "TP": 361, + "n_pred": 399, + "n_ref": 380 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9299934479108916, + "FN": 1358, + "FP": 31, + "IoU": 0.8691474328780028, + "TN": 14985, + "TP": 9226, + "n_pred": 9257, + "n_ref": 10584 + }, + "2": { + "Dice": 0.865152590489709, + "FN": 237, + "FP": 143, + "IoU": 0.7623514696685428, + "TN": 24001, + "TP": 1219, + "n_pred": 1362, + "n_ref": 1456 + }, + "3": { + "Dice": 0.804, + "FN": 31, + "FP": 67, + "IoU": 0.6722408026755853, + "TN": 25301, + "TP": 201, + "n_pred": 268, + "n_ref": 232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5626498147744606, + "FN": 40, + "FP": 1967, + "IoU": 0.3914493632504548, + "TN": 15902, + "TP": 1291, + "n_pred": 3258, + "n_ref": 1331 + }, + "2": { + "Dice": 0.8143337066069429, + "FN": 452, + "FP": 377, + "IoU": 0.6868152625613902, + "TN": 16553, + "TP": 1818, + "n_pred": 2195, + "n_ref": 2270 + }, + "3": { + "Dice": 0.8855167762603271, + "FN": 59, + "FP": 620, + "IoU": 0.794553706505295, + "TN": 15895, + "TP": 2626, + "n_pred": 3246, + "n_ref": 2685 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9246231155778895, + "FN": 26, + "FP": 19, + "IoU": 0.8598130841121495, + "TN": 6079, + "TP": 276, + "n_pred": 295, + "n_ref": 302 + }, + "2": { + "Dice": 0.8972823583602026, + "FN": 76, + "FP": 147, + "IoU": 0.8137009189640768, + "TN": 5203, + "TP": 974, + "n_pred": 1121, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9645438898450946, + "FN": 103, + "FP": 0, + "IoU": 0.9315159574468085, + "TN": 4896, + "TP": 1401, + "n_pred": 1401, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9696345856922285, + "FN": 81, + "FP": 37, + "IoU": 0.9410589410589411, + "TN": 4398, + "TP": 1884, + "n_pred": 1921, + "n_ref": 1965 + }, + "2": { + "Dice": 0.908833254605574, + "FN": 55, + "FP": 138, + "IoU": 0.8329004329004329, + "TN": 5245, + "TP": 962, + "n_pred": 1100, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9836622109060047, + "FN": 53, + "FP": 24, + "IoU": 0.9678496868475992, + "TN": 4005, + "TP": 2318, + "n_pred": 2342, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9571396846546747, + "FN": 165, + "FP": 28, + "IoU": 0.9178023850085179, + "TN": 4052, + "TP": 2155, + "n_pred": 2183, + "n_ref": 2320 + }, + "2": { + "Dice": 0.9007194244604316, + "FN": 15, + "FP": 54, + "IoU": 0.819371727748691, + "TN": 6018, + "TP": 313, + "n_pred": 367, + "n_ref": 328 + }, + "3": { + "Dice": 0.864, + "FN": 17, + "FP": 0, + "IoU": 0.7605633802816901, + "TN": 6329, + "TP": 54, + "n_pred": 54, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9723826525254646, + "FN": 48, + "FP": 215, + "IoU": 0.9462497445330064, + "TN": 1507, + "TP": 4630, + "n_pred": 4845, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9372693726937269, + "FN": 29, + "FP": 56, + "IoU": 0.8819444444444444, + "TN": 5680, + "TP": 635, + "n_pred": 691, + "n_ref": 664 + }, + "3": { + "Dice": 0.9806949806949807, + "FN": 8, + "FP": 12, + "IoU": 0.9621212121212122, + "TN": 5872, + "TP": 508, + "n_pred": 520, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8188369899087293, + "FN": 180.10714285714286, + "FP": 165.05952380952382, + "IoU": 0.7379416763531988, + "TN": 11196.27380952381, + "TP": 1258.5595238095239, + "n_pred": 1423.6190476190475, + "n_ref": 1438.6666666666667 + }, + "mean": { + "1": { + "Dice": 0.721018200149472, + "FN": 249.71428571428572, + "FP": 203.14285714285714, + "IoU": 0.6333884954917837, + "TN": 11219.607142857143, + "TP": 1127.5357142857142, + "n_pred": 1330.6785714285713, + "n_ref": 1377.25 + }, + "2": { + "Dice": 0.8707772388034637, + "FN": 167.03571428571428, + "FP": 192.96428571428572, + "IoU": 0.7809000735789671, + "TN": 11217.67857142857, + "TP": 1222.3214285714287, + "n_pred": 1415.2857142857142, + "n_ref": 1389.357142857143 + }, + "3": { + "Dice": 0.8647155307732523, + "FN": 123.57142857142857, + "FP": 99.07142857142857, + "IoU": 0.7995364599888457, + "TN": 11151.535714285714, + "TP": 1425.8214285714287, + "n_pred": 1524.892857142857, + "n_ref": 1549.392857142857 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 78, + "FP": 1, + "IoU": 0.0, + "TN": 12721, + "TP": 0, + "n_pred": 1, + "n_ref": 78 + }, + "2": { + "Dice": 0.8990435706695006, + "FN": 46, + "FP": 144, + "IoU": 0.8166023166023166, + "TN": 11764, + "TP": 846, + "n_pred": 990, + "n_ref": 892 + }, + "3": { + "Dice": 0.9485935984481086, + "FN": 35, + "FP": 18, + "IoU": 0.9022140221402214, + "TN": 12258, + "TP": 489, + "n_pred": 507, + "n_ref": 524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.971261309207025, + "FN": 45, + "FP": 63, + "IoU": 0.9441282979824107, + "TN": 10867, + "TP": 1825, + "n_pred": 1888, + "n_ref": 1870 + }, + "2": { + "Dice": 0.9191671769748928, + "FN": 73, + "FP": 191, + "IoU": 0.8504249291784702, + "TN": 11035, + "TP": 1501, + "n_pred": 1692, + "n_ref": 1574 + }, + "3": { + "Dice": 0.9824333116460637, + "FN": 77, + "FP": 4, + "IoU": 0.9654731457800512, + "TN": 10454, + "TP": 2265, + "n_pred": 2269, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.887374749498998, + "FN": 271, + "FP": 10, + "IoU": 0.797550432276657, + "TN": 17812, + "TP": 1107, + "n_pred": 1117, + "n_ref": 1378 + }, + "2": { + "Dice": 0.908866234167439, + "FN": 77, + "FP": 218, + "IoU": 0.8329558323895809, + "TN": 17434, + "TP": 1471, + "n_pred": 1689, + "n_ref": 1548 + }, + "3": { + "Dice": 0.9817765042979942, + "FN": 95, + "FP": 64, + "IoU": 0.9642053129221072, + "TN": 14758, + "TP": 4283, + "n_pred": 4347, + "n_ref": 4378 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8959482594635724, + "FN": 1088, + "FP": 6, + "IoU": 0.8115093039283253, + "TN": 13396, + "TP": 4710, + "n_pred": 4716, + "n_ref": 5798 + }, + "2": { + "Dice": 0.6702241195304163, + "FN": 966, + "FP": 579, + "IoU": 0.5040128410914928, + "TN": 16085, + "TP": 1570, + "n_pred": 2149, + "n_ref": 2536 + }, + "3": { + "Dice": 0.8920118343195266, + "FN": 983, + "FP": 39, + "IoU": 0.8050734312416555, + "TN": 13957, + "TP": 4221, + "n_pred": 4260, + "n_ref": 5204 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6380638063806381, + "FN": 440, + "FP": 1863, + "IoU": 0.46849757673667203, + "TN": 8467, + "TP": 2030, + "n_pred": 3893, + "n_ref": 2470 + }, + "2": { + "Dice": 0.6024096385542169, + "FN": 1016, + "FP": 304, + "IoU": 0.43103448275862066, + "TN": 10480, + "TP": 1000, + "n_pred": 1304, + "n_ref": 2016 + }, + "3": { + "Dice": 0.811442633035989, + "FN": 609, + "FP": 4, + "IoU": 0.682712215320911, + "TN": 10868, + "TP": 1319, + "n_pred": 1323, + "n_ref": 1928 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6494216614090431, + "FN": 1650, + "FP": 17, + "IoU": 0.4808470881345375, + "TN": 9589, + "TP": 1544, + "n_pred": 1561, + "n_ref": 3194 + }, + "2": { + "Dice": 0.9507042253521126, + "FN": 33, + "FP": 65, + "IoU": 0.9060402684563759, + "TN": 11757, + "TP": 945, + "n_pred": 1010, + "n_ref": 978 + }, + "3": { + "Dice": 0.9890260631001372, + "FN": 6, + "FP": 26, + "IoU": 0.9782903663500678, + "TN": 11326, + "TP": 1442, + "n_pred": 1468, + "n_ref": 1448 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5, + "FN": 4, + "FP": 0, + "IoU": 0.3333333333333333, + "TN": 12794, + "TP": 2, + "n_pred": 2, + "n_ref": 6 + }, + "2": { + "Dice": 0.9045383411580594, + "FN": 86, + "FP": 402, + "IoU": 0.8257142857142857, + "TN": 10000, + "TP": 2312, + "n_pred": 2714, + "n_ref": 2398 + }, + "3": { + "Dice": 0.9627329192546584, + "FN": 225, + "FP": 51, + "IoU": 0.9281437125748503, + "TN": 8959, + "TP": 3565, + "n_pred": 3616, + "n_ref": 3790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8, + "FN": 0, + "FP": 1, + "IoU": 0.6666666666666666, + "TN": 19197, + "TP": 2, + "n_pred": 3, + "n_ref": 2 + }, + "2": { + "Dice": 0.9230177059276367, + "FN": 99, + "FP": 101, + "IoU": 0.8570407433881344, + "TN": 17801, + "TP": 1199, + "n_pred": 1300, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9859713327233913, + "FN": 73, + "FP": 19, + "IoU": 0.9723308270676692, + "TN": 15875, + "TP": 3233, + "n_pred": 3252, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.945054945054945, + "FN": 14, + "FP": 6, + "IoU": 0.8958333333333334, + "TN": 6208, + "TP": 172, + "n_pred": 178, + "n_ref": 186 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 6397, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9542543458371455, + "FN": 79, + "FP": 21, + "IoU": 0.9125109361329834, + "TN": 11657, + "TP": 1043, + "n_pred": 1064, + "n_ref": 1122 + }, + "2": { + "Dice": 0.8767123287671232, + "FN": 248, + "FP": 148, + "IoU": 0.7804878048780488, + "TN": 10996, + "TP": 1408, + "n_pred": 1556, + "n_ref": 1656 + }, + "3": { + "Dice": 0.9464816650148662, + "FN": 12, + "FP": 204, + "IoU": 0.8984007525870179, + "TN": 10674, + "TP": 1910, + "n_pred": 2114, + "n_ref": 1922 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8575556197630743, + "FN": 208, + "FP": 285, + "IoU": 0.7506322711178554, + "TN": 10823, + "TP": 1484, + "n_pred": 1769, + "n_ref": 1692 + }, + "3": { + "Dice": 0.915954415954416, + "FN": 67, + "FP": 51, + "IoU": 0.8449408672798949, + "TN": 12039, + "TP": 643, + "n_pred": 694, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9814056098329657, + "FN": 59, + "FP": 0, + "IoU": 0.963490099009901, + "TN": 4784, + "TP": 1557, + "n_pred": 1557, + "n_ref": 1616 + }, + "2": { + "Dice": 0.8455790784557908, + "FN": 47, + "FP": 201, + "IoU": 0.732470334412082, + "TN": 5473, + "TP": 679, + "n_pred": 880, + "n_ref": 726 + }, + "3": { + "Dice": 0.8857221156481228, + "FN": 42, + "FP": 375, + "IoU": 0.794884407279882, + "TN": 4367, + "TP": 1616, + "n_pred": 1991, + "n_ref": 1658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7621225983531564, + "FN": 511, + "FP": 9, + "IoU": 0.6156688839615669, + "TN": 30647, + "TP": 833, + "n_pred": 842, + "n_ref": 1344 + }, + "2": { + "Dice": 0.9467248908296944, + "FN": 68, + "FP": 115, + "IoU": 0.8988391376451078, + "TN": 30191, + "TP": 1626, + "n_pred": 1741, + "n_ref": 1694 + }, + "3": { + "Dice": 0.8185654008438819, + "FN": 15, + "FP": 28, + "IoU": 0.6928571428571428, + "TN": 31860, + "TP": 97, + "n_pred": 125, + "n_ref": 112 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8151658767772512, + "FN": 74, + "FP": 82, + "IoU": 0.688, + "TN": 18700, + "TP": 344, + "n_pred": 426, + "n_ref": 418 + }, + "2": { + "Dice": 0.9013513513513514, + "FN": 35, + "FP": 111, + "IoU": 0.8204182041820418, + "TN": 18387, + "TP": 667, + "n_pred": 778, + "n_ref": 702 + }, + "3": { + "Dice": 0.7868131868131868, + "FN": 91, + "FP": 6, + "IoU": 0.6485507246376812, + "TN": 18924, + "TP": 179, + "n_pred": 185, + "n_ref": 270 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8297804645243398, + "FN": 177, + "FP": 358, + "IoU": 0.7090810222947254, + "TN": 30161, + "TP": 1304, + "n_pred": 1662, + "n_ref": 1481 + }, + "2": { + "Dice": 0.9169645592891431, + "FN": 292, + "FP": 521, + "IoU": 0.8466616371180686, + "TN": 26698, + "TP": 4489, + "n_pred": 5010, + "n_ref": 4781 + }, + "3": { + "Dice": 0.7750151607034567, + "FN": 289, + "FP": 82, + "IoU": 0.6326732673267327, + "TN": 30990, + "TP": 639, + "n_pred": 721, + "n_ref": 928 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9447794350999683, + "FN": 109, + "FP": 239, + "IoU": 0.8953383458646617, + "TN": 3075, + "TP": 2977, + "n_pred": 3216, + "n_ref": 3086 + }, + "2": { + "Dice": 0.9628293035005413, + "FN": 32, + "FP": 71, + "IoU": 0.9283228949199722, + "TN": 4963, + "TP": 1334, + "n_pred": 1405, + "n_ref": 1366 + }, + "3": { + "Dice": 0.9744807121661722, + "FN": 35, + "FP": 8, + "IoU": 0.9502314814814815, + "TN": 5536, + "TP": 821, + "n_pred": 829, + "n_ref": 856 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7875516036837091, + "FN": 184, + "FP": 485, + "IoU": 0.6495547407019382, + "TN": 10891, + "TP": 1240, + "n_pred": 1725, + "n_ref": 1424 + }, + "2": { + "Dice": 0.9367205542725173, + "FN": 54, + "FP": 83, + "IoU": 0.8809730668983493, + "TN": 11649, + "TP": 1014, + "n_pred": 1097, + "n_ref": 1068 + }, + "3": { + "Dice": 0.9810620126253249, + "FN": 29, + "FP": 22, + "IoU": 0.9628279883381924, + "TN": 11428, + "TP": 1321, + "n_pred": 1343, + "n_ref": 1350 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1346, + "IoU": 0.0, + "TN": 5054, + "TP": 0, + "n_pred": 1346, + "n_ref": 0 + }, + "2": { + "Dice": 0.744322960470984, + "FN": 49, + "FP": 559, + "IoU": 0.5927662424648359, + "TN": 4907, + "TP": 885, + "n_pred": 1444, + "n_ref": 934 + }, + "3": { + "Dice": 0.5541284403669725, + "FN": 21, + "FP": 708, + "IoU": 0.383248730964467, + "TN": 5218, + "TP": 453, + "n_pred": 1161, + "n_ref": 474 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 23, + "IoU": 0.0, + "TN": 6377, + "TP": 0, + "n_pred": 23, + "n_ref": 0 + }, + "2": { + "Dice": 0.7407407407407407, + "FN": 60, + "FP": 185, + "IoU": 0.5882352941176471, + "TN": 5805, + "TP": 350, + "n_pred": 535, + "n_ref": 410 + }, + "3": { + "Dice": 0.710752688172043, + "FN": 19, + "FP": 519, + "IoU": 0.5512927439532944, + "TN": 5201, + "TP": 661, + "n_pred": 1180, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9764705882352941, + "FN": 59, + "FP": 17, + "IoU": 0.9540229885057471, + "TN": 4747, + "TP": 1577, + "n_pred": 1594, + "n_ref": 1636 + }, + "2": { + "Dice": 0.8982630272952854, + "FN": 69, + "FP": 136, + "IoU": 0.8153153153153153, + "TN": 5290, + "TP": 905, + "n_pred": 1041, + "n_ref": 974 + }, + "3": { + "Dice": 0.9696491919590067, + "FN": 20, + "FP": 57, + "IoU": 0.9410864575363428, + "TN": 5093, + "TP": 1230, + "n_pred": 1287, + "n_ref": 1250 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9235668789808917, + "FN": 99, + "FP": 45, + "IoU": 0.8579881656804734, + "TN": 5386, + "TP": 870, + "n_pred": 915, + "n_ref": 969 + }, + "3": { + "Dice": 0.979381443298969, + "FN": 35, + "FP": 21, + "IoU": 0.9595959595959596, + "TN": 5014, + "TP": 1330, + "n_pred": 1351, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9425770308123249, + "FN": 47, + "FP": 35, + "IoU": 0.8913907284768212, + "TN": 12045, + "TP": 673, + "n_pred": 708, + "n_ref": 720 + }, + "2": { + "Dice": 0.9345475241889585, + "FN": 37, + "FP": 308, + "IoU": 0.8771367521367521, + "TN": 9992, + "TP": 2463, + "n_pred": 2771, + "n_ref": 2500 + }, + "3": { + "Dice": 0.9619929734908975, + "FN": 106, + "FP": 13, + "IoU": 0.9267692307692308, + "TN": 11175, + "TP": 1506, + "n_pred": 1519, + "n_ref": 1612 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6400937866354045, + "FN": 535, + "FP": 386, + "IoU": 0.4706896551724138, + "TN": 11060, + "TP": 819, + "n_pred": 1205, + "n_ref": 1354 + }, + "2": { + "Dice": 0.7869565217391304, + "FN": 360, + "FP": 228, + "IoU": 0.6487455197132617, + "TN": 11126, + "TP": 1086, + "n_pred": 1314, + "n_ref": 1446 + }, + "3": { + "Dice": 0.919197253762873, + "FN": 519, + "FP": 93, + "IoU": 0.8504764231614952, + "TN": 8707, + "TP": 3481, + "n_pred": 3574, + "n_ref": 4000 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8615870701178758, + "FN": 1113, + "FP": 26, + "IoU": 0.7568317677198976, + "TN": 1716, + "TP": 3545, + "n_pred": 3571, + "n_ref": 4658 + }, + "2": { + "Dice": 0.889198606271777, + "FN": 83, + "FP": 76, + "IoU": 0.8005018820577164, + "TN": 5603, + "TP": 638, + "n_pred": 714, + "n_ref": 721 + }, + "3": { + "Dice": 0.9573804573804574, + "FN": 17, + "FP": 65, + "IoU": 0.9182452642073778, + "TN": 5397, + "TP": 921, + "n_pred": 986, + "n_ref": 938 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9333333333333333, + "FN": 83, + "FP": 312, + "IoU": 0.875, + "TN": 9640, + "TP": 2765, + "n_pred": 3077, + "n_ref": 2848 + }, + "2": { + "Dice": 0.8913712158005505, + "FN": 415, + "FP": 256, + "IoU": 0.8040303738317757, + "TN": 9376, + "TP": 2753, + "n_pred": 3009, + "n_ref": 3168 + }, + "3": { + "Dice": 0.9544316474712068, + "FN": 24, + "FP": 158, + "IoU": 0.9128352490421456, + "TN": 10712, + "TP": 1906, + "n_pred": 2064, + "n_ref": 1930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8122270742358079, + "FN": 386, + "FP": 388, + "IoU": 0.6838235294117647, + "TN": 3952, + "TP": 1674, + "n_pred": 2062, + "n_ref": 2060 + }, + "2": { + "Dice": 0.8637770897832817, + "FN": 111, + "FP": 65, + "IoU": 0.7602179836512262, + "TN": 5666, + "TP": 558, + "n_pred": 623, + "n_ref": 669 + }, + "3": { + "Dice": 0.8376068376068376, + "FN": 16, + "FP": 136, + "IoU": 0.7205882352941176, + "TN": 5856, + "TP": 392, + "n_pred": 528, + "n_ref": 408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8084677840138648, + "FN": 179.2098765432099, + "FP": 176.0493827160494, + "IoU": 0.7339674669400411, + "TN": 11671.296296296297, + "TP": 1484.5555555555557, + "n_pred": 1660.6049382716053, + "n_ref": 1663.7654320987656 + }, + "mean": { + "1": { + "Dice": 0.687627336928387, + "FN": 307.6296296296296, + "FP": 250.14814814814815, + "IoU": 0.60377229259029, + "TN": 11299.925925925925, + "TP": 1653.4074074074074, + "n_pred": 1903.5555555555557, + "n_ref": 1961.037037037037 + }, + "2": { + "Dice": 0.8174751718911716, + "FN": 151.8148148148148, + "FP": 179.14814814814815, + "IoU": 0.7262501662691174, + "TN": 11920.0, + "TP": 1260.148148148148, + "n_pred": 1439.2962962962963, + "n_ref": 1411.962962962963 + }, + "3": { + "Dice": 0.9203008432220359, + "FN": 78.18518518518519, + "FP": 98.85185185185185, + "IoU": 0.8718799419607162, + "TN": 11793.962962962964, + "TP": 1540.111111111111, + "n_pred": 1638.962962962963, + "n_ref": 1618.2962962962963 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.5833333333333334, + "FN": 9, + "FP": 1, + "IoU": 0.4117647058823529, + "TN": 6383, + "TP": 7, + "n_pred": 8, + "n_ref": 16 + }, + "2": { + "Dice": 0.7934224049331963, + "FN": 100, + "FP": 302, + "IoU": 0.6575809199318569, + "TN": 5226, + "TP": 772, + "n_pred": 1074, + "n_ref": 872 + }, + "3": { + "Dice": 0.9428149398607301, + "FN": 271, + "FP": 0, + "IoU": 0.8918163672654691, + "TN": 3895, + "TP": 2234, + "n_pred": 2234, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9749496112870717, + "FN": 41, + "FP": 46, + "IoU": 0.951123595505618, + "TN": 4620, + "TP": 1693, + "n_pred": 1739, + "n_ref": 1734 + }, + "2": { + "Dice": 0.9084354722422494, + "FN": 88, + "FP": 39, + "IoU": 0.8322324966974901, + "TN": 5643, + "TP": 630, + "n_pred": 669, + "n_ref": 718 + }, + "3": { + "Dice": 0.9745762711864406, + "FN": 26, + "FP": 10, + "IoU": 0.9504132231404959, + "TN": 5674, + "TP": 690, + "n_pred": 700, + "n_ref": 716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 41, + "IoU": 0.0, + "TN": 19159, + "TP": 0, + "n_pred": 41, + "n_ref": 0 + }, + "2": { + "Dice": 0.8722924187725631, + "FN": 159, + "FP": 407, + "IoU": 0.7735094037615046, + "TN": 16701, + "TP": 1933, + "n_pred": 2340, + "n_ref": 2092 + }, + "3": { + "Dice": 0.9722515457698688, + "FN": 247, + "FP": 121, + "IoU": 0.9460014673514306, + "TN": 12385, + "TP": 6447, + "n_pred": 6568, + "n_ref": 6694 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7505567928730512, + "FN": 3, + "FP": 1565, + "IoU": 0.6007130124777184, + "TN": 8873, + "TP": 2359, + "n_pred": 3924, + "n_ref": 2362 + }, + "2": { + "Dice": 0.9071451054453887, + "FN": 133, + "FP": 162, + "IoU": 0.8300691244239631, + "TN": 11064, + "TP": 1441, + "n_pred": 1603, + "n_ref": 1574 + }, + "3": { + "Dice": 0.9805194805194806, + "FN": 84, + "FP": 72, + "IoU": 0.9617834394904459, + "TN": 8718, + "TP": 3926, + "n_pred": 3998, + "n_ref": 4010 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9811777860603802, + "FN": 17, + "FP": 185, + "IoU": 0.9630510334735687, + "TN": 933, + "TP": 5265, + "n_pred": 5450, + "n_ref": 5282 + }, + "2": { + "Dice": 0.8990825688073395, + "FN": 23, + "FP": 54, + "IoU": 0.8166666666666667, + "TN": 5980, + "TP": 343, + "n_pred": 397, + "n_ref": 366 + }, + "3": { + "Dice": 0.9525032092426188, + "FN": 37, + "FP": 0, + "IoU": 0.9093137254901961, + "TN": 5992, + "TP": 371, + "n_pred": 371, + "n_ref": 408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7905126694166176, + "FN": 1315, + "FP": 107, + "IoU": 0.6535931790499391, + "TN": 8695, + "TP": 2683, + "n_pred": 2790, + "n_ref": 3998 + }, + "2": { + "Dice": 0.914131169709263, + "FN": 32, + "FP": 95, + "IoU": 0.8418430884184309, + "TN": 11997, + "TP": 676, + "n_pred": 771, + "n_ref": 708 + }, + "3": { + "Dice": 0.9821590565467191, + "FN": 52, + "FP": 7, + "IoU": 0.9649435531788473, + "TN": 11117, + "TP": 1624, + "n_pred": 1631, + "n_ref": 1676 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9394957983193277, + "FN": 422, + "FP": 82, + "IoU": 0.8858954041204438, + "TN": 8383, + "TP": 3913, + "n_pred": 3995, + "n_ref": 4335 + }, + "2": { + "Dice": 0.8799543769603649, + "FN": 132, + "FP": 289, + "IoU": 0.7856415478615071, + "TN": 10836, + "TP": 1543, + "n_pred": 1832, + "n_ref": 1675 + }, + "3": { + "Dice": 0.9729306837740572, + "FN": 147, + "FP": 26, + "IoU": 0.9472882388787325, + "TN": 9518, + "TP": 3109, + "n_pred": 3135, + "n_ref": 3256 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.589041095890411, + "FN": 41, + "FP": 1339, + "IoU": 0.4174757281553398, + "TN": 10431, + "TP": 989, + "n_pred": 2328, + "n_ref": 1030 + }, + "2": { + "Dice": 0.7097322566935826, + "FN": 45, + "FP": 638, + "IoU": 0.5500658761528326, + "TN": 11282, + "TP": 835, + "n_pred": 1473, + "n_ref": 880 + }, + "3": { + "Dice": 0.713089802130898, + "FN": 11, + "FP": 743, + "IoU": 0.5541099940863394, + "TN": 11109, + "TP": 937, + "n_pred": 1680, + "n_ref": 948 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1073170731707317, + "FN": 2, + "FP": 1096, + "IoU": 0.05670103092783505, + "TN": 24436, + "TP": 66, + "n_pred": 1162, + "n_ref": 68 + }, + "2": { + "Dice": 0.900202565833896, + "FN": 659, + "FP": 80, + "IoU": 0.818516699410609, + "TN": 21528, + "TP": 3333, + "n_pred": 3413, + "n_ref": 3992 + }, + "3": { + "Dice": 0.3818615751789976, + "FN": 54, + "FP": 464, + "IoU": 0.2359882005899705, + "TN": 24922, + "TP": 160, + "n_pred": 624, + "n_ref": 214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6558265582655827, + "FN": 254, + "FP": 0, + "IoU": 0.4879032258064516, + "TN": 12304, + "TP": 242, + "n_pred": 242, + "n_ref": 496 + }, + "2": { + "Dice": 0.9445556619375054, + "FN": 217, + "FP": 420, + "IoU": 0.8949365000824674, + "TN": 6737, + "TP": 5426, + "n_pred": 5846, + "n_ref": 5643 + }, + "3": { + "Dice": 0.9299951385512882, + "FN": 160, + "FP": 128, + "IoU": 0.8691503861880964, + "TN": 10599, + "TP": 1913, + "n_pred": 2041, + "n_ref": 2073 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9252669039145908, + "FN": 132, + "FP": 99, + "IoU": 0.8609271523178808, + "TN": 36739, + "TP": 1430, + "n_pred": 1529, + "n_ref": 1562 + }, + "2": { + "Dice": 0.9263788774601117, + "FN": 691, + "FP": 218, + "IoU": 0.8628545564272783, + "TN": 31772, + "TP": 5719, + "n_pred": 5937, + "n_ref": 6410 + }, + "3": { + "Dice": 0.9233409610983981, + "FN": 204, + "FP": 64, + "IoU": 0.8575982996811902, + "TN": 36518, + "TP": 1614, + "n_pred": 1678, + "n_ref": 1818 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 0, + "IoU": 0.0, + "TN": 12794, + "TP": 0, + "n_pred": 0, + "n_ref": 6 + }, + "2": { + "Dice": 0.5400516795865633, + "FN": 547, + "FP": 521, + "IoU": 0.36991150442477877, + "TN": 11105, + "TP": 627, + "n_pred": 1148, + "n_ref": 1174 + }, + "3": { + "Dice": 0.9366114377338322, + "FN": 89, + "FP": 504, + "IoU": 0.8807800562927222, + "TN": 7826, + "TP": 4381, + "n_pred": 4885, + "n_ref": 4470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7959367365307959, + "FN": 1477, + "FP": 110, + "IoU": 0.6610422896198206, + "TN": 1718, + "TP": 3095, + "n_pred": 3205, + "n_ref": 4572 + }, + "2": { + "Dice": 0.8933231005372217, + "FN": 46, + "FP": 93, + "IoU": 0.8072122052704577, + "TN": 5679, + "TP": 582, + "n_pred": 675, + "n_ref": 628 + }, + "3": { + "Dice": 0.9613656783468104, + "FN": 41, + "FP": 2, + "IoU": 0.9256055363321799, + "TN": 5822, + "TP": 535, + "n_pred": 537, + "n_ref": 576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9553241518307021, + "FN": 24, + "FP": 109, + "IoU": 0.9144694533762058, + "TN": 11245, + "TP": 1422, + "n_pred": 1531, + "n_ref": 1446 + }, + "2": { + "Dice": 0.9039323046291687, + "FN": 134, + "FP": 59, + "IoU": 0.8247048138056312, + "TN": 11699, + "TP": 908, + "n_pred": 967, + "n_ref": 1042 + }, + "3": { + "Dice": 0.9598014888337469, + "FN": 9, + "FP": 72, + "IoU": 0.9227099236641222, + "TN": 11752, + "TP": 967, + "n_pred": 1039, + "n_ref": 976 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8275862068965517, + "FN": 16, + "FP": 4, + "IoU": 0.7058823529411765, + "TN": 6332, + "TP": 48, + "n_pred": 52, + "n_ref": 64 + }, + "2": { + "Dice": 0.8888888888888888, + "FN": 112, + "FP": 128, + "IoU": 0.8, + "TN": 5200, + "TP": 960, + "n_pred": 1088, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9716890595009597, + "FN": 29, + "FP": 89, + "IoU": 0.94493700419972, + "TN": 4257, + "TP": 2025, + "n_pred": 2114, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9700096742986134, + "FN": 286, + "FP": 86, + "IoU": 0.9417658108954289, + "TN": 12812, + "TP": 6016, + "n_pred": 6102, + "n_ref": 6302 + }, + "2": { + "Dice": 0.8251789976133651, + "FN": 246, + "FP": 340, + "IoU": 0.702386998476384, + "TN": 17231, + "TP": 1383, + "n_pred": 1723, + "n_ref": 1629 + }, + "3": { + "Dice": 0.9465828750981933, + "FN": 60, + "FP": 212, + "IoU": 0.8985831469052945, + "TN": 16518, + "TP": 2410, + "n_pred": 2622, + "n_ref": 2470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8793103448275862, + "FN": 14, + "FP": 28, + "IoU": 0.7846153846153846, + "TN": 6205, + "TP": 153, + "n_pred": 181, + "n_ref": 167 + }, + "2": { + "Dice": 0.5142857142857142, + "FN": 17, + "FP": 0, + "IoU": 0.34615384615384615, + "TN": 6374, + "TP": 9, + "n_pred": 9, + "n_ref": 26 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5692188708430008, + "FN": 1108, + "FP": 6, + "IoU": 0.3978378378378378, + "TN": 30150, + "TP": 736, + "n_pred": 742, + "n_ref": 1844 + }, + "2": { + "Dice": 0.9375896700143472, + "FN": 59, + "FP": 115, + "IoU": 0.8825118163403106, + "TN": 30519, + "TP": 1307, + "n_pred": 1422, + "n_ref": 1366 + }, + "3": { + "Dice": 0.9707724425887265, + "FN": 5, + "FP": 23, + "IoU": 0.9432048681541582, + "TN": 31507, + "TP": 465, + "n_pred": 488, + "n_ref": 470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 53, + "IoU": 0.0, + "TN": 12747, + "TP": 0, + "n_pred": 53, + "n_ref": 0 + }, + "2": { + "Dice": 0.883920894239037, + "FN": 36, + "FP": 234, + "IoU": 0.7919876733436055, + "TN": 11502, + "TP": 1028, + "n_pred": 1262, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9747899159663865, + "FN": 10, + "FP": 38, + "IoU": 0.9508196721311475, + "TN": 11824, + "TP": 928, + "n_pred": 966, + "n_ref": 938 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9498181818181818, + "FN": 198, + "FP": 216, + "IoU": 0.9044321329639889, + "TN": 8468, + "TP": 3918, + "n_pred": 4134, + "n_ref": 4116 + }, + "2": { + "Dice": 0.9225251076040172, + "FN": 93, + "FP": 15, + "IoU": 0.8561917443408789, + "TN": 12049, + "TP": 643, + "n_pred": 658, + "n_ref": 736 + }, + "3": { + "Dice": 0.9892271662763467, + "FN": 12, + "FP": 11, + "IoU": 0.9786839666357738, + "TN": 11721, + "TP": 1056, + "n_pred": 1067, + "n_ref": 1068 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5104010293802274, + "FN": 2243, + "FP": 40, + "IoU": 0.3426432479124676, + "TN": 15727, + "TP": 1190, + "n_pred": 1230, + "n_ref": 3433 + }, + "2": { + "Dice": 0.8385282399812515, + "FN": 299, + "FP": 390, + "IoU": 0.721953188054883, + "TN": 16722, + "TP": 1789, + "n_pred": 2179, + "n_ref": 2088 + }, + "3": { + "Dice": 0.9548232792984321, + "FN": 290, + "FP": 50, + "IoU": 0.9135519959318587, + "TN": 15267, + "TP": 3593, + "n_pred": 3643, + "n_ref": 3883 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9580686149936467, + "FN": 10, + "FP": 56, + "IoU": 0.9195121951219513, + "TN": 5580, + "TP": 754, + "n_pred": 810, + "n_ref": 764 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 18, + "IoU": 0.0, + "TN": 6382, + "TP": 0, + "n_pred": 18, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8386145910095799, + "FN": 278, + "FP": 1474, + "IoU": 0.7220812182741116, + "TN": 6496, + "TP": 4552, + "n_pred": 6026, + "n_ref": 4830 + }, + "2": { + "Dice": 0.8976076555023923, + "FN": 159, + "FP": 162, + "IoU": 0.8142361111111112, + "TN": 11072, + "TP": 1407, + "n_pred": 1569, + "n_ref": 1566 + }, + "3": { + "Dice": 0.9651988636363636, + "FN": 79, + "FP": 19, + "IoU": 0.9327385037748799, + "TN": 11343, + "TP": 1359, + "n_pred": 1378, + "n_ref": 1438 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9512900613213005, + "FN": 410, + "FP": 11, + "IoU": 0.9071050308914387, + "TN": 8268, + "TP": 4111, + "n_pred": 4122, + "n_ref": 4521 + }, + "2": { + "Dice": 0.9182389937106918, + "FN": 72, + "FP": 58, + "IoU": 0.8488372093023255, + "TN": 11940, + "TP": 730, + "n_pred": 788, + "n_ref": 802 + }, + "3": { + "Dice": 0.8897136797454931, + "FN": 194, + "FP": 14, + "IoU": 0.8013371537726839, + "TN": 11753, + "TP": 839, + "n_pred": 853, + "n_ref": 1033 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.848313033775501, + "FN": 177.14285714285714, + "FP": 137.60714285714286, + "IoU": 0.7699752866329699, + "TN": 10546.988095238094, + "TP": 1252.547619047619, + "n_pred": 1390.1547619047622, + "n_ref": 1429.6904761904761 + }, + "mean": { + "1": { + "Dice": 0.7488897889852821, + "FN": 241.28571428571428, + "FP": 199.21428571428572, + "IoU": 0.6602006123668771, + "TN": 10402.92857142857, + "TP": 1270.857142857143, + "n_pred": 1470.0714285714287, + "n_ref": 1512.142857142857 + }, + "2": { + "Dice": 0.8826658589581684, + "FN": 202.57142857142858, + "FP": 127.46428571428571, + "IoU": 0.793512568209218, + "TN": 10510.785714285714, + "TP": 1273.4642857142858, + "n_pred": 1400.9285714285713, + "n_ref": 1476.0357142857142 + }, + "3": { + "Dice": 0.9133834533830523, + "FN": 87.57142857142857, + "FP": 86.14285714285714, + "IoU": 0.8562126793228146, + "TN": 10727.25, + "TP": 1213.3214285714287, + "n_pred": 1299.4642857142858, + "n_ref": 1300.892857142857 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6385281385281385, + "FN": 44, + "FP": 624, + "IoU": 0.46899841017488075, + "TN": 11542, + "TP": 590, + "n_pred": 1214, + "n_ref": 634 + }, + "2": { + "Dice": 0.8740784429371866, + "FN": 212, + "FP": 215, + "IoU": 0.7763226820324778, + "TN": 10891, + "TP": 1482, + "n_pred": 1697, + "n_ref": 1694 + }, + "3": { + "Dice": 0.9707587272961484, + "FN": 144, + "FP": 83, + "IoU": 0.9431789737171464, + "TN": 8805, + "TP": 3768, + "n_pred": 3851, + "n_ref": 3912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5213675213675214, + "FN": 1, + "FP": 111, + "IoU": 0.35260115606936415, + "TN": 19027, + "TP": 61, + "n_pred": 172, + "n_ref": 62 + }, + "2": { + "Dice": 0.8546913921948519, + "FN": 242, + "FP": 283, + "IoU": 0.7462542290961818, + "TN": 17131, + "TP": 1544, + "n_pred": 1827, + "n_ref": 1786 + }, + "3": { + "Dice": 0.9668166479190101, + "FN": 199, + "FP": 155, + "IoU": 0.9357648339684268, + "TN": 13689, + "TP": 5157, + "n_pred": 5312, + "n_ref": 5356 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9836585752816119, + "FN": 80, + "FP": 23, + "IoU": 0.9678426475179519, + "TN": 3197, + "TP": 3100, + "n_pred": 3123, + "n_ref": 3180 + }, + "2": { + "Dice": 0.936372269705603, + "FN": 24, + "FP": 110, + "IoU": 0.8803571428571428, + "TN": 5280, + "TP": 986, + "n_pred": 1096, + "n_ref": 1010 + }, + "3": { + "Dice": 0.982948294829483, + "FN": 61, + "FP": 1, + "IoU": 0.9664683612763656, + "TN": 4551, + "TP": 1787, + "n_pred": 1788, + "n_ref": 1848 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9448098370031456, + "FN": 50, + "FP": 143, + "IoU": 0.8953929539295393, + "TN": 4555, + "TP": 1652, + "n_pred": 1795, + "n_ref": 1702 + }, + "2": { + "Dice": 0.9126984126984127, + "FN": 53, + "FP": 57, + "IoU": 0.8394160583941606, + "TN": 5715, + "TP": 575, + "n_pred": 632, + "n_ref": 628 + }, + "3": { + "Dice": 0.9771766694843618, + "FN": 14, + "FP": 40, + "IoU": 0.9553719008264463, + "TN": 5190, + "TP": 1156, + "n_pred": 1196, + "n_ref": 1170 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8561827956989247, + "FN": 19, + "FP": 195, + "IoU": 0.7485311398354877, + "TN": 18349, + "TP": 637, + "n_pred": 832, + "n_ref": 656 + }, + "2": { + "Dice": 0.9666448659254414, + "FN": 58, + "FP": 44, + "IoU": 0.9354430379746835, + "TN": 17620, + "TP": 1478, + "n_pred": 1522, + "n_ref": 1536 + }, + "3": { + "Dice": 0.9, + "FN": 5, + "FP": 29, + "IoU": 0.8181818181818182, + "TN": 19013, + "TP": 153, + "n_pred": 182, + "n_ref": 158 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.817695125387433, + "FN": 67, + "FP": 580, + "IoU": 0.6916110581506196, + "TN": 17102, + "TP": 1451, + "n_pred": 2031, + "n_ref": 1518 + }, + "2": { + "Dice": 0.8287611897198961, + "FN": 354, + "FP": 239, + "IoU": 0.7075936883629191, + "TN": 17172, + "TP": 1435, + "n_pred": 1674, + "n_ref": 1789 + }, + "3": { + "Dice": 0.577259475218659, + "FN": 75, + "FP": 215, + "IoU": 0.4057377049180328, + "TN": 18712, + "TP": 198, + "n_pred": 413, + "n_ref": 273 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7421383647798742, + "FN": 158, + "FP": 6, + "IoU": 0.59, + "TN": 6000, + "TP": 236, + "n_pred": 242, + "n_ref": 394 + }, + "2": { + "Dice": 0.907859078590786, + "FN": 109, + "FP": 231, + "IoU": 0.8312655086848635, + "TN": 4385, + "TP": 1675, + "n_pred": 1906, + "n_ref": 1784 + }, + "3": { + "Dice": 0.9017341040462428, + "FN": 4, + "FP": 98, + "IoU": 0.8210526315789474, + "TN": 5830, + "TP": 468, + "n_pred": 566, + "n_ref": 472 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6605879578682597, + "FN": 2127, + "FP": 32, + "IoU": 0.4931924882629108, + "TN": 8540, + "TP": 2101, + "n_pred": 2133, + "n_ref": 4228 + }, + "2": { + "Dice": 0.8481203007518797, + "FN": 250, + "FP": 53, + "IoU": 0.7362924281984334, + "TN": 11651, + "TP": 846, + "n_pred": 899, + "n_ref": 1096 + }, + "3": { + "Dice": 0.9336521219366407, + "FN": 45, + "FP": 66, + "IoU": 0.875560538116592, + "TN": 11908, + "TP": 781, + "n_pred": 847, + "n_ref": 826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8063380281690141, + "FN": 99, + "FP": 11, + "IoU": 0.6755162241887905, + "TN": 38061, + "TP": 229, + "n_pred": 240, + "n_ref": 328 + }, + "2": { + "Dice": 0.8408103229257204, + "FN": 2032, + "FP": 349, + "IoU": 0.7253431768370054, + "TN": 29731, + "TP": 6288, + "n_pred": 6637, + "n_ref": 8320 + }, + "3": { + "Dice": 0.6246074793034542, + "FN": 906, + "FP": 409, + "IoU": 0.45413034454130347, + "TN": 35991, + "TP": 1094, + "n_pred": 1503, + "n_ref": 2000 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.947502116850127, + "FN": 93, + "FP": 31, + "IoU": 0.9002413515687852, + "TN": 5157, + "TP": 1119, + "n_pred": 1150, + "n_ref": 1212 + }, + "2": { + "Dice": 0.8778724502969274, + "FN": 238, + "FP": 235, + "IoU": 0.7823285780027611, + "TN": 4227, + "TP": 1700, + "n_pred": 1935, + "n_ref": 1938 + }, + "3": { + "Dice": 0.9667642500430514, + "FN": 109, + "FP": 84, + "IoU": 0.9356666666666666, + "TN": 3400, + "TP": 2807, + "n_pred": 2891, + "n_ref": 2916 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9563106796116505, + "FN": 45, + "FP": 45, + "IoU": 0.9162790697674419, + "TN": 11725, + "TP": 985, + "n_pred": 1030, + "n_ref": 1030 + }, + "2": { + "Dice": 0.9029810298102982, + "FN": 106, + "FP": 252, + "IoU": 0.8231225296442688, + "TN": 10776, + "TP": 1666, + "n_pred": 1918, + "n_ref": 1772 + }, + "3": { + "Dice": 0.9338742393509127, + "FN": 103, + "FP": 60, + "IoU": 0.875951293759513, + "TN": 11486, + "TP": 1151, + "n_pred": 1211, + "n_ref": 1254 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42132416165090286, + "FN": 655, + "FP": 18, + "IoU": 0.2668845315904139, + "TN": 24682, + "TP": 245, + "n_pred": 263, + "n_ref": 900 + }, + "2": { + "Dice": 0.9384458771632168, + "FN": 568, + "FP": 339, + "IoU": 0.8840301751694156, + "TN": 17779, + "TP": 6914, + "n_pred": 7253, + "n_ref": 7482 + }, + "3": { + "Dice": 0.932259456349777, + "FN": 189, + "FP": 282, + "IoU": 0.873114224137931, + "TN": 21888, + "TP": 3241, + "n_pred": 3523, + "n_ref": 3430 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9744740532959327, + "FN": 118, + "FP": 64, + "IoU": 0.950218818380744, + "TN": 9144, + "TP": 3474, + "n_pred": 3538, + "n_ref": 3592 + }, + "2": { + "Dice": 0.9360146252285192, + "FN": 36, + "FP": 34, + "IoU": 0.8797250859106529, + "TN": 12218, + "TP": 512, + "n_pred": 546, + "n_ref": 548 + }, + "3": { + "Dice": 0.9835051546391752, + "FN": 3, + "FP": 13, + "IoU": 0.9675456389452333, + "TN": 12307, + "TP": 477, + "n_pred": 490, + "n_ref": 480 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 819, + "IoU": 0.0, + "TN": 5581, + "TP": 0, + "n_pred": 819, + "n_ref": 0 + }, + "2": { + "Dice": 0.8315301391035549, + "FN": 116, + "FP": 102, + "IoU": 0.7116402116402116, + "TN": 5644, + "TP": 538, + "n_pred": 640, + "n_ref": 654 + }, + "3": { + "Dice": 0.9678129298486933, + "FN": 47, + "FP": 70, + "IoU": 0.9376332622601279, + "TN": 4524, + "TP": 1759, + "n_pred": 1829, + "n_ref": 1806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.919093851132686, + "FN": 72, + "FP": 53, + "IoU": 0.8502994011976048, + "TN": 5565, + "TP": 710, + "n_pred": 763, + "n_ref": 782 + }, + "3": { + "Dice": 0.9856545128511656, + "FN": 34, + "FP": 14, + "IoU": 0.971714790807307, + "TN": 4703, + "TP": 1649, + "n_pred": 1663, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8426573426573427, + "FN": 87, + "FP": 3, + "IoU": 0.7280966767371602, + "TN": 6069, + "TP": 241, + "n_pred": 244, + "n_ref": 328 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9453328374860543, + "FN": 97, + "FP": 50, + "IoU": 0.8963328631875882, + "TN": 11382, + "TP": 1271, + "n_pred": 1321, + "n_ref": 1368 + }, + "2": { + "Dice": 0.8425610887720384, + "FN": 406, + "FP": 103, + "IoU": 0.7279529663281668, + "TN": 10929, + "TP": 1362, + "n_pred": 1465, + "n_ref": 1768 + }, + "3": { + "Dice": 0.9618788291354663, + "FN": 69, + "FP": 43, + "IoU": 0.9265573770491803, + "TN": 11275, + "TP": 1413, + "n_pred": 1456, + "n_ref": 1482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7771839471382762, + "FN": 219, + "FP": 2074, + "IoU": 0.6355689764780674, + "TN": 6508, + "TP": 3999, + "n_pred": 6073, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8757062146892656, + "FN": 149, + "FP": 115, + "IoU": 0.7788944723618091, + "TN": 11606, + "TP": 930, + "n_pred": 1045, + "n_ref": 1079 + }, + "3": { + "Dice": 0.936969696969697, + "FN": 78, + "FP": 26, + "IoU": 0.8814139110604333, + "TN": 11923, + "TP": 773, + "n_pred": 799, + "n_ref": 851 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.92820813771518, + "FN": 692, + "FP": 42, + "IoU": 0.8660339478006935, + "TN": 7321, + "TP": 4745, + "n_pred": 4787, + "n_ref": 5437 + }, + "2": { + "Dice": 0.9268465909090909, + "FN": 143, + "FP": 63, + "IoU": 0.8636664460622104, + "TN": 11289, + "TP": 1305, + "n_pred": 1368, + "n_ref": 1448 + }, + "3": { + "Dice": 0.9807881773399014, + "FN": 22, + "FP": 56, + "IoU": 0.9623006283228613, + "TN": 10731, + "TP": 1991, + "n_pred": 2047, + "n_ref": 2013 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9132826827351324, + "FN": 296, + "FP": 35, + "IoU": 0.8404050144648023, + "TN": 10726, + "TP": 1743, + "n_pred": 1778, + "n_ref": 2039 + }, + "2": { + "Dice": 0.8747566515249838, + "FN": 118, + "FP": 75, + "IoU": 0.7773933102652826, + "TN": 11933, + "TP": 674, + "n_pred": 749, + "n_ref": 792 + }, + "3": { + "Dice": 0.9514335868929198, + "FN": 66, + "FP": 17, + "IoU": 0.9073660714285714, + "TN": 11904, + "TP": 813, + "n_pred": 830, + "n_ref": 879 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8486368312757202, + "FN": 1769, + "FP": 585, + "IoU": 0.7370713727242265, + "TN": 10247, + "TP": 6599, + "n_pred": 7184, + "n_ref": 8368 + }, + "2": { + "Dice": 0.8065882352941176, + "FN": 221, + "FP": 190, + "IoU": 0.6758675078864353, + "TN": 17932, + "TP": 857, + "n_pred": 1047, + "n_ref": 1078 + }, + "3": { + "Dice": 0.9215311004784689, + "FN": 69, + "FP": 95, + "IoU": 0.8544809228039042, + "TN": 18073, + "TP": 963, + "n_pred": 1058, + "n_ref": 1032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9493562231759657, + "FN": 40, + "FP": 78, + "IoU": 0.9035947712418301, + "TN": 5176, + "TP": 1106, + "n_pred": 1184, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7697297297297298, + "FN": 79, + "FP": 347, + "IoU": 0.6256590509666081, + "TN": 5262, + "TP": 712, + "n_pred": 1059, + "n_ref": 791 + }, + "3": { + "Dice": 0.7607736681370886, + "FN": 188, + "FP": 517, + "IoU": 0.6139101861993428, + "TN": 4574, + "TP": 1121, + "n_pred": 1638, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 9, + "IoU": 0.0, + "TN": 12791, + "TP": 0, + "n_pred": 9, + "n_ref": 0 + }, + "2": { + "Dice": 0.9464861379754996, + "FN": 86, + "FP": 80, + "IoU": 0.8984088127294981, + "TN": 11166, + "TP": 1468, + "n_pred": 1548, + "n_ref": 1554 + }, + "3": { + "Dice": 0.9762368523568368, + "FN": 22, + "FP": 39, + "IoU": 0.9535768645357686, + "TN": 11486, + "TP": 1253, + "n_pred": 1292, + "n_ref": 1275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8786366984648818, + "FN": 180.7857142857143, + "FP": 116.45238095238095, + "IoU": 0.8061986097603371, + "TN": 10590.29761904762, + "TP": 1455.3214285714284, + "n_pred": 1571.7738095238094, + "n_ref": 1636.107142857143 + }, + "mean": { + "1": { + "Dice": 0.828172881150742, + "FN": 380.4642857142857, + "FP": 120.0, + "IoU": 0.7507229927059315, + "TN": 9606.07142857143, + "TP": 2236.3214285714284, + "n_pred": 2356.3214285714284, + "n_ref": 2616.785714285714 + }, + "2": { + "Dice": 0.8886849557115188, + "FN": 94.28571428571429, + "FP": 134.03571428571428, + "IoU": 0.8040557834040942, + "TN": 11183.714285714286, + "TP": 930.8214285714286, + "n_pred": 1064.857142857143, + "n_ref": 1025.107142857143 + }, + "3": { + "Dice": 0.9190522585323846, + "FN": 67.60714285714286, + "FP": 95.32142857142857, + "IoU": 0.8638170531709853, + "TN": 10981.107142857143, + "TP": 1198.8214285714287, + "n_pred": 1294.142857142857, + "n_ref": 1266.4285714285713 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9066323245331617, + "FN": 288, + "FP": 2, + "IoU": 0.8292108362779741, + "TN": 11102, + "TP": 1408, + "n_pred": 1410, + "n_ref": 1696 + }, + "2": { + "Dice": 0.8740740740740741, + "FN": 125, + "FP": 62, + "IoU": 0.7763157894736842, + "TN": 11964, + "TP": 649, + "n_pred": 711, + "n_ref": 774 + }, + "3": { + "Dice": 0.9763884270036581, + "FN": 38, + "FP": 33, + "IoU": 0.9538661468486029, + "TN": 11261, + "TP": 1468, + "n_pred": 1501, + "n_ref": 1506 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9622948395682389, + "FN": 108, + "FP": 147, + "IoU": 0.9273297235679681, + "TN": 2891, + "TP": 3254, + "n_pred": 3401, + "n_ref": 3362 + }, + "2": { + "Dice": 0.9304301646309081, + "FN": 98, + "FP": 33, + "IoU": 0.8699106256206555, + "TN": 5393, + "TP": 876, + "n_pred": 909, + "n_ref": 974 + }, + "3": { + "Dice": 0.9824915824915825, + "FN": 11, + "FP": 41, + "IoU": 0.9655857048312376, + "TN": 4889, + "TP": 1459, + "n_pred": 1500, + "n_ref": 1470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9233060312732688, + "FN": 250, + "FP": 59, + "IoU": 0.8575380359612724, + "TN": 10631, + "TP": 1860, + "n_pred": 1919, + "n_ref": 2110 + }, + "2": { + "Dice": 0.9185580774365821, + "FN": 24, + "FP": 37, + "IoU": 0.8493827160493828, + "TN": 12395, + "TP": 344, + "n_pred": 381, + "n_ref": 368 + }, + "3": { + "Dice": 0.9757281553398058, + "FN": 14, + "FP": 6, + "IoU": 0.95260663507109, + "TN": 12378, + "TP": 402, + "n_pred": 408, + "n_ref": 416 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9721405087385361, + "FN": 19, + "FP": 142, + "IoU": 0.9457912457912457, + "TN": 3430, + "TP": 2809, + "n_pred": 2951, + "n_ref": 2828 + }, + "2": { + "Dice": 0.7607461476074615, + "FN": 183, + "FP": 112, + "IoU": 0.6138743455497382, + "TN": 5636, + "TP": 469, + "n_pred": 581, + "n_ref": 652 + }, + "3": { + "Dice": 0.9756852343059239, + "FN": 107, + "FP": 3, + "IoU": 0.9525248165731549, + "TN": 4083, + "TP": 2207, + "n_pred": 2210, + "n_ref": 2314 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6954709641567102, + "FN": 2191, + "FP": 1, + "IoU": 0.5331203407880725, + "TN": 8105, + "TP": 2503, + "n_pred": 2504, + "n_ref": 4694 + }, + "2": { + "Dice": 0.8920265780730897, + "FN": 88, + "FP": 172, + "IoU": 0.8050974512743628, + "TN": 11466, + "TP": 1074, + "n_pred": 1246, + "n_ref": 1162 + }, + "3": { + "Dice": 0.9861408450704225, + "FN": 80, + "FP": 43, + "IoU": 0.9726605912424984, + "TN": 8301, + "TP": 4376, + "n_pred": 4419, + "n_ref": 4456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9814221652786675, + "FN": 70, + "FP": 104, + "IoU": 0.9635220125786164, + "TN": 1630, + "TP": 4596, + "n_pred": 4700, + "n_ref": 4666 + }, + "2": { + "Dice": 0.90625, + "FN": 20, + "FP": 76, + "IoU": 0.8285714285714286, + "TN": 5840, + "TP": 464, + "n_pred": 540, + "n_ref": 484 + }, + "3": { + "Dice": 0.9830508474576272, + "FN": 8, + "FP": 14, + "IoU": 0.9666666666666667, + "TN": 5740, + "TP": 638, + "n_pred": 652, + "n_ref": 646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6881720430107527, + "FN": 28, + "FP": 30, + "IoU": 0.5245901639344263, + "TN": 25478, + "TP": 64, + "n_pred": 94, + "n_ref": 92 + }, + "2": { + "Dice": 0.9165313413445924, + "FN": 153, + "FP": 104, + "IoU": 0.8459232613908872, + "TN": 23932, + "TP": 1411, + "n_pred": 1515, + "n_ref": 1564 + }, + "3": { + "Dice": 0.8820960698689956, + "FN": 3, + "FP": 24, + "IoU": 0.7890625, + "TN": 25472, + "TP": 101, + "n_pred": 125, + "n_ref": 104 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 935, + "IoU": 0.0, + "TN": 5465, + "TP": 0, + "n_pred": 935, + "n_ref": 0 + }, + "2": { + "Dice": 0.8907446068197634, + "FN": 72, + "FP": 242, + "IoU": 0.8030112923462986, + "TN": 4806, + "TP": 1280, + "n_pred": 1522, + "n_ref": 1352 + }, + "3": { + "Dice": 0.9391424619640387, + "FN": 82, + "FP": 94, + "IoU": 0.8852672750977836, + "TN": 4866, + "TP": 1358, + "n_pred": 1452, + "n_ref": 1440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9496887966804979, + "FN": 179, + "FP": 15, + "IoU": 0.9041975308641975, + "TN": 10775, + "TP": 1831, + "n_pred": 1846, + "n_ref": 2010 + }, + "2": { + "Dice": 0.8959088555152771, + "FN": 99, + "FP": 102, + "IoU": 0.8114446529080676, + "TN": 11734, + "TP": 865, + "n_pred": 967, + "n_ref": 964 + }, + "3": { + "Dice": 0.9507853403141361, + "FN": 68, + "FP": 26, + "IoU": 0.906187624750499, + "TN": 11798, + "TP": 908, + "n_pred": 934, + "n_ref": 976 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.811577752553916, + "FN": 69, + "FP": 263, + "IoU": 0.6829035339063992, + "TN": 18153, + "TP": 715, + "n_pred": 978, + "n_ref": 784 + }, + "2": { + "Dice": 0.8881704980842912, + "FN": 225, + "FP": 709, + "IoU": 0.7988369588628043, + "TN": 14557, + "TP": 3709, + "n_pred": 4418, + "n_ref": 3934 + }, + "3": { + "Dice": 0.7840809914470239, + "FN": 346, + "FP": 891, + "IoU": 0.6448463967843813, + "TN": 15717, + "TP": 2246, + "n_pred": 3137, + "n_ref": 2592 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9676813228109733, + "FN": 137, + "FP": 35, + "IoU": 0.9373862395340371, + "TN": 3653, + "TP": 2575, + "n_pred": 2610, + "n_ref": 2712 + }, + "2": { + "Dice": 0.9398976982097187, + "FN": 80, + "FP": 108, + "IoU": 0.8866103739445115, + "TN": 4742, + "TP": 1470, + "n_pred": 1578, + "n_ref": 1550 + }, + "3": { + "Dice": 0.9803025977733372, + "FN": 31, + "FP": 38, + "IoU": 0.9613661814109743, + "TN": 4614, + "TP": 1717, + "n_pred": 1755, + "n_ref": 1748 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9805138388978528, + "FN": 28, + "FP": 129, + "IoU": 0.961772583394205, + "TN": 15093, + "TP": 3950, + "n_pred": 4079, + "n_ref": 3978 + }, + "2": { + "Dice": 0.9556561085972851, + "FN": 32, + "FP": 66, + "IoU": 0.9150779896013865, + "TN": 18046, + "TP": 1056, + "n_pred": 1122, + "n_ref": 1088 + }, + "3": { + "Dice": 0.9587727708533078, + "FN": 36, + "FP": 7, + "IoU": 0.9208103130755064, + "TN": 18657, + "TP": 500, + "n_pred": 507, + "n_ref": 536 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9677784058790277, + "FN": 124, + "FP": 104, + "IoU": 0.9375684556407448, + "TN": 9148, + "TP": 3424, + "n_pred": 3528, + "n_ref": 3548 + }, + "2": { + "Dice": 0.9280205655526992, + "FN": 72, + "FP": 40, + "IoU": 0.8657074340527577, + "TN": 11966, + "TP": 722, + "n_pred": 762, + "n_ref": 794 + }, + "3": { + "Dice": 0.9764232317423807, + "FN": 35, + "FP": 6, + "IoU": 0.9539325842696629, + "TN": 11910, + "TP": 849, + "n_pred": 855, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4538116591928251, + "FN": 249, + "FP": 360, + "IoU": 0.29350348027842227, + "TN": 11938, + "TP": 253, + "n_pred": 613, + "n_ref": 502 + }, + "2": { + "Dice": 0.8135831381733021, + "FN": 485, + "FP": 311, + "IoU": 0.685748124753257, + "TN": 10267, + "TP": 1737, + "n_pred": 2048, + "n_ref": 2222 + }, + "3": { + "Dice": 0.6975206611570248, + "FN": 5, + "FP": 544, + "IoU": 0.5355329949238579, + "TN": 11618, + "TP": 633, + "n_pred": 1177, + "n_ref": 638 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7636491722437478, + "FN": 1311, + "FP": 31, + "IoU": 0.6176638176638176, + "TN": 2890, + "TP": 2168, + "n_pred": 2199, + "n_ref": 3479 + }, + "2": { + "Dice": 0.8306294613887086, + "FN": 69, + "FP": 192, + "IoU": 0.7103218645948945, + "TN": 5499, + "TP": 640, + "n_pred": 832, + "n_ref": 709 + }, + "3": { + "Dice": 0.9497964721845319, + "FN": 170, + "FP": 15, + "IoU": 0.9043927648578811, + "TN": 4465, + "TP": 1750, + "n_pred": 1765, + "n_ref": 1920 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8727272727272727, + "FN": 90, + "FP": 8, + "IoU": 0.7741935483870968, + "TN": 5966, + "TP": 336, + "n_pred": 344, + "n_ref": 426 + }, + "3": { + "Dice": 0.9359823399558499, + "FN": 0, + "FP": 29, + "IoU": 0.8796680497925311, + "TN": 6159, + "TP": 212, + "n_pred": 241, + "n_ref": 212 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6333333333333333, + "FN": 5, + "FP": 17, + "IoU": 0.4634146341463415, + "TN": 6359, + "TP": 19, + "n_pred": 36, + "n_ref": 24 + }, + "2": { + "Dice": 0.9336051252184042, + "FN": 85, + "FP": 143, + "IoU": 0.8754778809393774, + "TN": 4569, + "TP": 1603, + "n_pred": 1746, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9791523482245131, + "FN": 134, + "FP": 48, + "IoU": 0.9591561938958707, + "TN": 1944, + "TP": 4274, + "n_pred": 4322, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9316027417237859, + "FN": 442, + "FP": 27, + "IoU": 0.8719628719628719, + "TN": 9137, + "TP": 3194, + "n_pred": 3221, + "n_ref": 3636 + }, + "2": { + "Dice": 0.9355586462679648, + "FN": 51, + "FP": 88, + "IoU": 0.8789198606271778, + "TN": 11652, + "TP": 1009, + "n_pred": 1097, + "n_ref": 1060 + }, + "3": { + "Dice": 0.9561925365062196, + "FN": 60, + "FP": 21, + "IoU": 0.9160621761658031, + "TN": 11835, + "TP": 884, + "n_pred": 905, + "n_ref": 944 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9372536486630446, + "FN": 581, + "FP": 8, + "IoU": 0.8819165998396151, + "TN": 1412, + "TP": 4399, + "n_pred": 4407, + "n_ref": 4980 + }, + "2": { + "Dice": 0.9568261376896149, + "FN": 8, + "FP": 29, + "IoU": 0.9172259507829977, + "TN": 5953, + "TP": 410, + "n_pred": 439, + "n_ref": 418 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9300678666273237, + "FN": 56, + "FP": 181, + "IoU": 0.8692774407060121, + "TN": 10987, + "TP": 1576, + "n_pred": 1757, + "n_ref": 1632 + }, + "2": { + "Dice": 0.7552828902522154, + "FN": 6, + "FP": 353, + "IoU": 0.6067907995618839, + "TN": 11887, + "TP": 554, + "n_pred": 907, + "n_ref": 560 + }, + "3": { + "Dice": 0.5825242718446602, + "FN": 6, + "FP": 596, + "IoU": 0.410958904109589, + "TN": 11778, + "TP": 420, + "n_pred": 1016, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.97288842544317, + "FN": 154, + "FP": 210, + "IoU": 0.9472081218274112, + "TN": 5905, + "TP": 6531, + "n_pred": 6741, + "n_ref": 6685 + }, + "2": { + "Dice": 0.921415068863084, + "FN": 200, + "FP": 91, + "IoU": 0.8542814221331998, + "TN": 10803, + "TP": 1706, + "n_pred": 1797, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9835436970762103, + "FN": 60, + "FP": 43, + "IoU": 0.9676202452059101, + "TN": 9619, + "TP": 3078, + "n_pred": 3121, + "n_ref": 3138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7673456138927209, + "FN": 2664, + "FP": 203, + "IoU": 0.6225148123765635, + "TN": 24405, + "TP": 4728, + "n_pred": 4931, + "n_ref": 7392 + }, + "2": { + "Dice": 0.866006600660066, + "FN": 132, + "FP": 274, + "IoU": 0.7636786961583236, + "TN": 30282, + "TP": 1312, + "n_pred": 1586, + "n_ref": 1444 + }, + "3": { + "Dice": 0.8676092544987146, + "FN": 181, + "FP": 25, + "IoU": 0.7661748013620885, + "TN": 31119, + "TP": 675, + "n_pred": 700, + "n_ref": 856 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9288428777355523, + "FN": 444, + "FP": 99, + "IoU": 0.8671397112796673, + "TN": 8713, + "TP": 3544, + "n_pred": 3643, + "n_ref": 3988 + }, + "2": { + "Dice": 0.7953539823008849, + "FN": 107, + "FP": 263, + "IoU": 0.660238751147842, + "TN": 11711, + "TP": 719, + "n_pred": 982, + "n_ref": 826 + }, + "3": { + "Dice": 0.9541120381406436, + "FN": 111, + "FP": 43, + "IoU": 0.9122507122507123, + "TN": 11045, + "TP": 1601, + "n_pred": 1644, + "n_ref": 1712 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9619047619047619, + "FN": 165, + "FP": 243, + "IoU": 0.926605504587156, + "TN": 7241, + "TP": 5151, + "n_pred": 5394, + "n_ref": 5316 + }, + "2": { + "Dice": 0.8911783644558918, + "FN": 70, + "FP": 99, + "IoU": 0.8037166085946573, + "TN": 11939, + "TP": 692, + "n_pred": 791, + "n_ref": 762 + }, + "3": { + "Dice": 0.8216159496327388, + "FN": 293, + "FP": 47, + "IoU": 0.697239536954586, + "TN": 11677, + "TP": 783, + "n_pred": 830, + "n_ref": 1076 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7887700534759359, + "FN": 1091, + "FP": 15, + "IoU": 0.6512141280353201, + "TN": 16029, + "TP": 2065, + "n_pred": 2080, + "n_ref": 3156 + }, + "2": { + "Dice": 0.947942488844819, + "FN": 66, + "FP": 39, + "IoU": 0.9010367577756834, + "TN": 18139, + "TP": 956, + "n_pred": 995, + "n_ref": 1022 + }, + "3": { + "Dice": 0.978116079923882, + "FN": 14, + "FP": 32, + "IoU": 0.957169459962756, + "TN": 18126, + "TP": 1028, + "n_pred": 1060, + "n_ref": 1042 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2848070/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8440127621801141, + "FN": 177.56340388007055, + "FP": 148.08130511463847, + "IoU": 0.7669318515414443, + "TN": 10719.430687830687, + "TP": 1394.2896825396826, + "n_pred": 1542.3709876543212, + "n_ref": 1571.8530864197533 + }, + "mean": { + "1": { + "Dice": 0.7665142556500795, + "FN": 279.3187830687831, + "FP": 191.00105820105819, + "IoU": 0.6847132258435847, + "TN": 10305.456613756614, + "TP": 1663.5886243386244, + "n_pred": 1854.5896825396826, + "n_ref": 1942.9074074074074 + }, + "2": { + "Dice": 0.8651326559144022, + "FN": 161.32010582010582, + "FP": 153.74391534391535, + "IoU": 0.7751275566359774, + "TN": 10942.907142857142, + "TP": 1181.3939153439153, + "n_pred": 1335.137830687831, + "n_ref": 1342.7140211640212 + }, + "3": { + "Dice": 0.9003913749758603, + "FN": 92.05132275132276, + "FP": 99.49894179894179, + "IoU": 0.8409547721447705, + "TN": 10909.928306878308, + "TP": 1337.886507936508, + "n_pred": 1437.38544973545, + "n_ref": 1429.9378306878307 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_002/summary.json b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_002/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..0437a69404f119bf38ce26a435fd8ec331234205 --- /dev/null +++ b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_002/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.9053010295950958, + "FN": 815.8533333333335, + "FP": 835.2733333333334, + "IoU": 0.8321657353937647, + "TN": 843399.2533333333, + "TP": 9378.26, + "n_pred": 10213.533333333333, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8914590405170912, + "FN": 937.58, + "FP": 897.08, + "IoU": 0.8100568885540237, + "TN": 843677.5, + "TP": 8916.48, + "n_pred": 9813.56, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8814853551442772, + "FN": 1048.68, + "FP": 1153.26, + "IoU": 0.7908287010198123, + "TN": 843219.88, + "TP": 9006.82, + "n_pred": 10160.08, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9429586931239191, + "FN": 461.3, + "FP": 455.48, + "IoU": 0.8956116166074582, + "TN": 843300.38, + "TP": 10211.48, + "n_pred": 10666.96, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9341445648913835, + "FN": 545, + "FP": 992, + "IoU": 0.8764270783084097, + "TN": 1093482, + "TP": 10901, + "n_pred": 11893, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8566162406537994, + "FN": 1140, + "FP": 2983, + "IoU": 0.7491939899020622, + "TN": 1089481, + "TP": 12316, + "n_pred": 15299, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9458385697490574, + "FN": 877, + "FP": 1795, + "IoU": 0.8972426258508633, + "TN": 1079917, + "TP": 23331, + "n_pred": 25126, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8772893772893773, + "FN": 88, + "FP": 1252, + "IoU": 0.7814029363784666, + "TN": 1099790, + "TP": 4790, + "n_pred": 6042, + "n_ref": 4878 + }, + "2": { + "Dice": 0.899968384445147, + "FN": 1747, + "FP": 1417, + "IoU": 0.8181295625682589, + "TN": 1088523, + "TP": 14233, + "n_pred": 15650, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9696472966696719, + "FN": 736, + "FP": 375, + "IoU": 0.9410828869915682, + "TN": 1087063, + "TP": 17746, + "n_pred": 18121, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9212941176470588, + "FN": 1039, + "FP": 299, + "IoU": 0.854073508561457, + "TN": 900271, + "TP": 7831, + "n_pred": 8130, + "n_ref": 8870 + }, + "2": { + "Dice": 0.9037715636659156, + "FN": 1553, + "FP": 1052, + "IoU": 0.8244372556948376, + "TN": 894602, + "TP": 12233, + "n_pred": 13285, + "n_ref": 13786 + }, + "3": { + "Dice": 0.976663704812234, + "FN": 528, + "FP": 470, + "IoU": 0.9543917375011425, + "TN": 887558, + "TP": 20884, + "n_pred": 21354, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7641653905053599, + "FN": 2487, + "FP": 285, + "IoU": 0.6183395291201983, + "TN": 902177, + "TP": 4491, + "n_pred": 4776, + "n_ref": 6978 + }, + "2": { + "Dice": 0.9046272044700542, + "FN": 1372, + "FP": 1359, + "IoU": 0.8258623987757444, + "TN": 893757, + "TP": 12952, + "n_pred": 14311, + "n_ref": 14324 + }, + "3": { + "Dice": 0.972610880017287, + "FN": 630, + "FP": 384, + "IoU": 0.9466820906509622, + "TN": 890422, + "TP": 18004, + "n_pred": 18388, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.95806872187408, + "FN": 1398, + "FP": 596, + "IoU": 0.919512392023896, + "TN": 1400986, + "TP": 22780, + "n_pred": 23376, + "n_ref": 24178 + }, + "2": { + "Dice": 0.9025216654720792, + "FN": 1233, + "FP": 1759, + "IoU": 0.8223594371549011, + "TN": 1408917, + "TP": 13851, + "n_pred": 15610, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9772929740858789, + "FN": 593, + "FP": 554, + "IoU": 0.9555942702284166, + "TN": 1399930, + "TP": 24683, + "n_pred": 25237, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9327351806767514, + "FN": 501, + "FP": 1958, + "IoU": 0.8739491490670495, + "TN": 1406252, + "TP": 17049, + "n_pred": 19007, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8954965357967667, + "FN": 1109, + "FP": 2149, + "IoU": 0.810768426555149, + "TN": 1408543, + "TP": 13959, + "n_pred": 16108, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9702269692923898, + "FN": 899, + "FP": 439, + "IoU": 0.9421755477764813, + "TN": 1402621, + "TP": 21801, + "n_pred": 22240, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9598412953729023, + "FN": 307, + "FP": 442, + "IoU": 0.9227835051546391, + "TN": 752348, + "TP": 8951, + "n_pred": 9393, + "n_ref": 9258 + }, + "2": { + "Dice": 0.885169737606251, + "FN": 1027, + "FP": 1148, + "IoU": 0.7939950748247774, + "TN": 751490, + "TP": 8383, + "n_pred": 9531, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9721593765711413, + "FN": 547, + "FP": 339, + "IoU": 0.945826964231122, + "TN": 745693, + "TP": 15469, + "n_pred": 15808, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8271018384631275, + "FN": 914, + "FP": 760, + "IoU": 0.7051778795350475, + "TN": 756370, + "TP": 4004, + "n_pred": 4764, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8523054086649967, + "FN": 2051, + "FP": 1133, + "IoU": 0.7426238784253496, + "TN": 749677, + "TP": 9187, + "n_pred": 10320, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9551743703897692, + "FN": 970, + "FP": 57, + "IoU": 0.9141950037597126, + "TN": 750079, + "TP": 10942, + "n_pred": 10999, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9663679570438631, + "FN": 526, + "FP": 401, + "IoU": 0.934924534924535, + "TN": 1064027, + "TP": 13318, + "n_pred": 13719, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8872262955758392, + "FN": 976, + "FP": 1285, + "IoU": 0.7973106230389959, + "TN": 1067117, + "TP": 8894, + "n_pred": 10179, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9712330291564656, + "FN": 949, + "FP": 85, + "IoU": 0.9440748553193791, + "TN": 1059783, + "TP": 17455, + "n_pred": 17540, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.958715938783128, + "FN": 454, + "FP": 652, + "IoU": 0.9207054774878118, + "TN": 1064324, + "TP": 12842, + "n_pred": 13494, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8836241547264387, + "FN": 1457, + "FP": 1004, + "IoU": 0.7915113520840393, + "TN": 1066468, + "TP": 9343, + "n_pred": 10347, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9633661713140758, + "FN": 802, + "FP": 295, + "IoU": 0.929321564332195, + "TN": 1062751, + "TP": 14424, + "n_pred": 14719, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9431620209059234, + "FN": 470, + "FP": 574, + "IoU": 0.8924376674222131, + "TN": 1096214, + "TP": 8662, + "n_pred": 9236, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8885001457786663, + "FN": 816, + "FP": 1861, + "IoU": 0.7993704564190962, + "TN": 1092577, + "TP": 10666, + "n_pred": 12527, + "n_ref": 11482 + }, + "3": { + "Dice": 0.927136328360783, + "FN": 744, + "FP": 946, + "IoU": 0.8641697476289986, + "TN": 1093478, + "TP": 10752, + "n_pred": 11698, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8799206086668871, + "FN": 392, + "FP": 334, + "IoU": 0.7855877141169522, + "TN": 1102534, + "TP": 2660, + "n_pred": 2994, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8797146148415146, + "FN": 515, + "FP": 2722, + "IoU": 0.7852593870240149, + "TN": 1090846, + "TP": 11837, + "n_pred": 14559, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7972826086956522, + "FN": 346, + "FP": 1146, + "IoU": 0.6629010393131496, + "TN": 1101494, + "TP": 2934, + "n_pred": 4080, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8959016393442623, + "FN": 1513, + "FP": 265, + "IoU": 0.8114328136599851, + "TN": 1137451, + "TP": 7651, + "n_pred": 7916, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9202500762427569, + "FN": 1311, + "FP": 1827, + "IoU": 0.8522807513063126, + "TN": 1125637, + "TP": 18105, + "n_pred": 19932, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9353229476632242, + "FN": 1243, + "FP": 235, + "IoU": 0.8785039046444718, + "TN": 1134715, + "TP": 10687, + "n_pred": 10922, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7490909090909091, + "FN": 921, + "FP": 114, + "IoU": 0.5988372093023255, + "TN": 1144300, + "TP": 1545, + "n_pred": 1659, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8947101571742437, + "FN": 3260, + "FP": 1724, + "IoU": 0.809480122324159, + "TN": 1120720, + "TP": 21176, + "n_pred": 22900, + "n_ref": 24436 + }, + "3": { + "Dice": 0.6836651213526043, + "FN": 209, + "FP": 2111, + "IoU": 0.5193702092396933, + "TN": 1142053, + "TP": 2507, + "n_pred": 4618, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9415070684362976, + "FN": 957, + "FP": 396, + "IoU": 0.8894788433262539, + "TN": 788558, + "TP": 10889, + "n_pred": 11285, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8928142685645687, + "FN": 825, + "FP": 1050, + "IoU": 0.8063816604708798, + "TN": 791116, + "TP": 7809, + "n_pred": 8859, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9609962406015038, + "FN": 473, + "FP": 191, + "IoU": 0.9249208502939846, + "TN": 791956, + "TP": 8180, + "n_pred": 8371, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.875222816399287, + "FN": 502, + "FP": 478, + "IoU": 0.7781299524564184, + "TN": 796383, + "TP": 3437, + "n_pred": 3915, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9148961805695007, + "FN": 1262, + "FP": 857, + "IoU": 0.8431416092975054, + "TN": 787291, + "TP": 11390, + "n_pred": 12247, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8784077604950661, + "FN": 220, + "FP": 507, + "IoU": 0.7831792424694304, + "TN": 797447, + "TP": 2626, + "n_pred": 3133, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9480430461306464, + "FN": 361, + "FP": 1155, + "IoU": 0.901218479181599, + "TN": 1332493, + "TP": 13831, + "n_pred": 14986, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8967317823674763, + "FN": 989, + "FP": 1226, + "IoU": 0.8127958079783637, + "TN": 1336008, + "TP": 9617, + "n_pred": 10843, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9750362844702467, + "FN": 533, + "FP": 327, + "IoU": 0.9512885868026055, + "TN": 1330185, + "TP": 16795, + "n_pred": 17122, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7756349314138259, + "FN": 157, + "FP": 3147, + "IoU": 0.6334997226844149, + "TN": 1338825, + "TP": 5711, + "n_pred": 8858, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8832758337440447, + "FN": 1361, + "FP": 1481, + "IoU": 0.7909525560867966, + "TN": 1334245, + "TP": 10753, + "n_pred": 12234, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9579457281262057, + "FN": 445, + "FP": 536, + "IoU": 0.9192858318249136, + "TN": 1335686, + "TP": 11173, + "n_pred": 11709, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8365565255829374, + "FN": 1107, + "FP": 3330, + "IoU": 0.7190349544072948, + "TN": 836176, + "TP": 11355, + "n_pred": 14685, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8691690396065235, + "FN": 1054, + "FP": 1473, + "IoU": 0.7686109330647377, + "TN": 841047, + "TP": 8394, + "n_pred": 9867, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9719867204433835, + "FN": 775, + "FP": 246, + "IoU": 0.94550016013665, + "TN": 833234, + "TP": 17713, + "n_pred": 17959, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.895381149079985, + "FN": 977, + "FP": 416, + "IoU": 0.8105792765841718, + "TN": 844614, + "TP": 5961, + "n_pred": 6377, + "n_ref": 6938 + }, + "2": { + "Dice": 0.887363000132048, + "FN": 1212, + "FP": 1347, + "IoU": 0.7975314502729647, + "TN": 839329, + "TP": 10080, + "n_pred": 11427, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9616210518096279, + "FN": 681, + "FP": 302, + "IoU": 0.9260791096405474, + "TN": 838670, + "TP": 12315, + "n_pred": 12617, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.896982132170642, + "FN": 610, + "FP": 595, + "IoU": 0.8132072546891955, + "TN": 845517, + "TP": 5246, + "n_pred": 5841, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8942528735632184, + "FN": 995, + "FP": 1305, + "IoU": 0.8087318087318087, + "TN": 839943, + "TP": 9725, + "n_pred": 11030, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9574240563982732, + "FN": 869, + "FP": 206, + "IoU": 0.9183254824494758, + "TN": 838806, + "TP": 12087, + "n_pred": 12293, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.905146549734595, + "FN": 143, + "FP": 268, + "IoU": 0.8267284991568297, + "TN": 849596, + "TP": 1961, + "n_pred": 2229, + "n_ref": 2104 + }, + "2": { + "Dice": 0.9155204720328509, + "FN": 1104, + "FP": 1015, + "IoU": 0.8442026321594001, + "TN": 838367, + "TP": 11482, + "n_pred": 12497, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9527038481098491, + "FN": 316, + "FP": 521, + "IoU": 0.9096795079313694, + "TN": 842701, + "TP": 8430, + "n_pred": 8951, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9347686375321337, + "FN": 1452, + "FP": 172, + "IoU": 0.877526395173454, + "TN": 783780, + "TP": 11636, + "n_pred": 11808, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8540909830287914, + "FN": 978, + "FP": 1713, + "IoU": 0.7453392637456232, + "TN": 786473, + "TP": 7876, + "n_pred": 9589, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9535757211538461, + "FN": 764, + "FP": 472, + "IoU": 0.9112706389088299, + "TN": 783110, + "TP": 12694, + "n_pred": 13166, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8254375377187688, + "FN": 2197, + "FP": 117, + "IoU": 0.7027617212588311, + "TN": 789255, + "TP": 5471, + "n_pred": 5588, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8818522646671395, + "FN": 919, + "FP": 1413, + "IoU": 0.7886724059809697, + "TN": 786005, + "TP": 8703, + "n_pred": 10116, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9473860402834346, + "FN": 542, + "FP": 401, + "IoU": 0.9000318032439308, + "TN": 787607, + "TP": 8490, + "n_pred": 8891, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9297568352767939, + "FN": 787, + "FP": 978, + "IoU": 0.8687341960434329, + "TN": 883224, + "TP": 11681, + "n_pred": 12659, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8947618594923472, + "FN": 926, + "FP": 1288, + "IoU": 0.8095647686220541, + "TN": 885044, + "TP": 9412, + "n_pred": 10700, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9623287671232876, + "FN": 450, + "FP": 474, + "IoU": 0.9273927392739274, + "TN": 883944, + "TP": 11802, + "n_pred": 12276, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7884770998543453, + "FN": 1484, + "FP": 1130, + "IoU": 0.6508148543948704, + "TN": 889184, + "TP": 4872, + "n_pred": 6002, + "n_ref": 6356 + }, + "2": { + "Dice": 0.9147648686030428, + "FN": 936, + "FP": 1036, + "IoU": 0.8429185916839255, + "TN": 884116, + "TP": 10582, + "n_pred": 11618, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9485806414464214, + "FN": 589, + "FP": 304, + "IoU": 0.9021905805038335, + "TN": 887540, + "TP": 8237, + "n_pred": 8541, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9671681415929203, + "FN": 291, + "FP": 451, + "IoU": 0.9364236140861966, + "TN": 750377, + "TP": 10929, + "n_pred": 11380, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9372328675022812, + "FN": 654, + "FP": 653, + "IoU": 0.8818798011748757, + "TN": 750983, + "TP": 9758, + "n_pred": 10411, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9791764655577885, + "FN": 302, + "FP": 185, + "IoU": 0.9592024796850129, + "TN": 750111, + "TP": 11450, + "n_pred": 11635, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9115021678143331, + "FN": 218, + "FP": 476, + "IoU": 0.837394564198688, + "TN": 757780, + "TP": 3574, + "n_pred": 4050, + "n_ref": 3792 + }, + "2": { + "Dice": 0.9179537925396893, + "FN": 964, + "FP": 943, + "IoU": 0.8483499005964215, + "TN": 749473, + "TP": 10668, + "n_pred": 11611, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9564698867024448, + "FN": 418, + "FP": 166, + "IoU": 0.9165714285714286, + "TN": 755048, + "TP": 6416, + "n_pred": 6582, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9044585987261147, + "FN": 132, + "FP": 1518, + "IoU": 0.8255813953488372, + "TN": 985868, + "TP": 7810, + "n_pred": 9328, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8901943559898979, + "FN": 641, + "FP": 1359, + "IoU": 0.802117344414762, + "TN": 985221, + "TP": 8107, + "n_pred": 9466, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9799916382966015, + "FN": 138, + "FP": 532, + "IoU": 0.9607682398407308, + "TN": 978250, + "TP": 16408, + "n_pred": 16940, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7181165806370389, + "FN": 390, + "FP": 1849, + "IoU": 0.5602042820663917, + "TN": 990237, + "TP": 2852, + "n_pred": 4701, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8611916616512557, + "FN": 464, + "FP": 2073, + "IoU": 0.756221773806092, + "TN": 984921, + "TP": 7870, + "n_pred": 9943, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9328091493924232, + "FN": 174, + "FP": 1330, + "IoU": 0.8740790354989953, + "TN": 983384, + "TP": 10440, + "n_pred": 11770, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9647356936721334, + "FN": 618, + "FP": 384, + "IoU": 0.9318738101713353, + "TN": 743308, + "TP": 13706, + "n_pred": 14090, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9119331195602383, + "FN": 849, + "FP": 689, + "IoU": 0.8381223029154826, + "TN": 748515, + "TP": 7963, + "n_pred": 8652, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9788362126099059, + "FN": 225, + "FP": 254, + "IoU": 0.9585496711664936, + "TN": 746460, + "TP": 11077, + "n_pred": 11331, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8330860534124629, + "FN": 744, + "FP": 1056, + "IoU": 0.7139224411951685, + "TN": 751724, + "TP": 4492, + "n_pred": 5548, + "n_ref": 5236 + }, + "2": { + "Dice": 0.926508769141101, + "FN": 589, + "FP": 798, + "IoU": 0.8630799605133268, + "TN": 747886, + "TP": 8743, + "n_pred": 9541, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9293822439956985, + "FN": 303, + "FP": 288, + "IoU": 0.8680803571428571, + "TN": 753536, + "TP": 3889, + "n_pred": 4177, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9660295891802654, + "FN": 339, + "FP": 196, + "IoU": 0.9342913289118153, + "TN": 630834, + "TP": 7607, + "n_pred": 7803, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8997711670480549, + "FN": 451, + "FP": 644, + "IoU": 0.8178036605657238, + "TN": 632966, + "TP": 4915, + "n_pred": 5559, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9636982022627889, + "FN": 392, + "FP": 131, + "IoU": 0.9299397186872069, + "TN": 631511, + "TP": 6942, + "n_pred": 7073, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9172650640024976, + "FN": 82, + "FP": 448, + "IoU": 0.8471741637831603, + "TN": 635508, + "TP": 2938, + "n_pred": 3386, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9398415469316503, + "FN": 353, + "FP": 543, + "IoU": 0.8865104496516782, + "TN": 631081, + "TP": 6999, + "n_pred": 7542, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9370304114490161, + "FN": 137, + "FP": 215, + "IoU": 0.8815213732749916, + "TN": 636005, + "TP": 2619, + "n_pred": 2834, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9520810784217258, + "FN": 926, + "FP": 535, + "IoU": 0.9085446009389672, + "TN": 967065, + "TP": 14514, + "n_pred": 15049, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8973932334997227, + "FN": 997, + "FP": 1038, + "IoU": 0.8138832997987927, + "TN": 972106, + "TP": 8899, + "n_pred": 9937, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9696451792680661, + "FN": 169, + "FP": 648, + "IoU": 0.9410788980239435, + "TN": 969174, + "TP": 13049, + "n_pred": 13697, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9437088782389733, + "FN": 379, + "FP": 314, + "IoU": 0.8934174100276838, + "TN": 976538, + "TP": 5809, + "n_pred": 6123, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9334797145566146, + "FN": 603, + "FP": 730, + "IoU": 0.8752573460602657, + "TN": 972354, + "TP": 9353, + "n_pred": 10083, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9616650213886146, + "FN": 145, + "FP": 321, + "IoU": 0.9261606718428141, + "TN": 976729, + "TP": 5845, + "n_pred": 6166, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9503642424990739, + "FN": 786, + "FP": 822, + "IoU": 0.9054228914245382, + "TN": 1031574, + "TP": 15394, + "n_pred": 16216, + "n_ref": 16180 + }, + "2": { + "Dice": 0.9047324987368776, + "FN": 650, + "FP": 1047, + "IoU": 0.8260379292670426, + "TN": 1038821, + "TP": 8058, + "n_pred": 9105, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9711487880872416, + "FN": 260, + "FP": 453, + "IoU": 0.9439156768661999, + "TN": 1035863, + "TP": 12000, + "n_pred": 12453, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9311402286032897, + "FN": 420, + "FP": 321, + "IoU": 0.8711528429838289, + "TN": 1042825, + "TP": 5010, + "n_pred": 5331, + "n_ref": 5430 + }, + "2": { + "Dice": 0.9070358858434586, + "FN": 692, + "FP": 1282, + "IoU": 0.8298862461220269, + "TN": 1036972, + "TP": 9630, + "n_pred": 10912, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9553359683794467, + "FN": 246, + "FP": 206, + "IoU": 0.914491108588725, + "TN": 1043290, + "TP": 4834, + "n_pred": 5040, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9242389352001106, + "FN": 1128, + "FP": 517, + "IoU": 0.8591488997345663, + "TN": 477537, + "TP": 10034, + "n_pred": 10551, + "n_ref": 11162 + }, + "2": { + "Dice": 0.8243953732912723, + "FN": 365, + "FP": 637, + "IoU": 0.7012522361359571, + "TN": 485862, + "TP": 2352, + "n_pred": 2989, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9671130155329406, + "FN": 137, + "FP": 170, + "IoU": 0.936320265505082, + "TN": 484395, + "TP": 4514, + "n_pred": 4684, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8726165678577151, + "FN": 1205, + "FP": 385, + "IoU": 0.7740193291642979, + "TN": 482180, + "TP": 5446, + "n_pred": 5831, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8735919899874843, + "FN": 568, + "FP": 240, + "IoU": 0.7755555555555556, + "TN": 485616, + "TP": 2792, + "n_pred": 3032, + "n_ref": 3360 + }, + "3": { + "Dice": 0.9034300791556729, + "FN": 78, + "FP": 288, + "IoU": 0.8238691049085659, + "TN": 487138, + "TP": 1712, + "n_pred": 2000, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9139781521704513, + "FN": 1527, + "FP": 1174, + "IoU": 0.8415835777126099, + "TN": 463430, + "TP": 14349, + "n_pred": 15523, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8355001611690126, + "FN": 631, + "FP": 900, + "IoU": 0.7174755489942793, + "TN": 475061, + "TP": 3888, + "n_pred": 4788, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9548839873961615, + "FN": 293, + "FP": 337, + "IoU": 0.9136631492394135, + "TN": 473183, + "TP": 6667, + "n_pred": 7004, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8966568073854979, + "FN": 1607, + "FP": 699, + "IoU": 0.812672623883022, + "TN": 468170, + "TP": 10004, + "n_pred": 10703, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8530070974971984, + "FN": 1095, + "FP": 479, + "IoU": 0.7436899527764208, + "TN": 474339, + "TP": 4567, + "n_pred": 5046, + "n_ref": 5662 + }, + "3": { + "Dice": 0.891609533137447, + "FN": 75, + "FP": 589, + "IoU": 0.8044182621502209, + "TN": 477085, + "TP": 2731, + "n_pred": 3320, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8781430296524889, + "FN": 4310, + "FP": 231, + "IoU": 0.7827584557240588, + "TN": 623737, + "TP": 16362, + "n_pred": 16593, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8316228713206271, + "FN": 1692, + "FP": 1294, + "IoU": 0.7117760617760618, + "TN": 634280, + "TP": 7374, + "n_pred": 8668, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9589921678735037, + "FN": 1019, + "FP": 91, + "IoU": 0.9212151323727731, + "TN": 630551, + "TP": 12979, + "n_pred": 13070, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.832139011621431, + "FN": 4126, + "FP": 395, + "IoU": 0.7125325872702994, + "TN": 628913, + "TP": 11206, + "n_pred": 11601, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8714025176815978, + "FN": 2371, + "FP": 520, + "IoU": 0.7721109884912501, + "TN": 631954, + "TP": 9795, + "n_pred": 10315, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9364985939441501, + "FN": 402, + "FP": 569, + "IoU": 0.8805804944041323, + "TN": 636509, + "TP": 7160, + "n_pred": 7729, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9295078349150298, + "FN": 994, + "FP": 2200, + "IoU": 0.8682995216889329, + "TN": 540228, + "TP": 21058, + "n_pred": 23258, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7887859349014018, + "FN": 1149, + "FP": 629, + "IoU": 0.6512357787367595, + "TN": 559382, + "TP": 3320, + "n_pred": 3949, + "n_ref": 4469 + }, + "3": { + "Dice": 0.937917612714888, + "FN": 668, + "FP": 289, + "IoU": 0.8830930857561691, + "TN": 556294, + "TP": 7229, + "n_pred": 7518, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.757235959363619, + "FN": 531, + "FP": 4535, + "IoU": 0.6093159558880235, + "TN": 551513, + "TP": 7901, + "n_pred": 12436, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8610731912212538, + "FN": 763, + "FP": 560, + "IoU": 0.7560390927530887, + "TN": 559057, + "TP": 4100, + "n_pred": 4660, + "n_ref": 4863 + }, + "3": { + "Dice": 0.9364832366671382, + "FN": 142, + "FP": 307, + "IoU": 0.8805533386538973, + "TN": 560721, + "TP": 3310, + "n_pred": 3617, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8927905718237027, + "FN": 151, + "FP": 1632, + "IoU": 0.806342999891387, + "TN": 409673, + "TP": 7424, + "n_pred": 9056, + "n_ref": 7575 + }, + "2": { + "Dice": 0.735737946264262, + "FN": 857, + "FP": 579, + "IoU": 0.5819505094614265, + "TN": 415445, + "TP": 1999, + "n_pred": 2578, + "n_ref": 2856 + }, + "3": { + "Dice": 0.9155565590426733, + "FN": 144, + "FP": 604, + "IoU": 0.8442640016656257, + "TN": 414077, + "TP": 4055, + "n_pred": 4659, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7986810771203517, + "FN": 377, + "FP": 1821, + "IoU": 0.6648368405001525, + "TN": 412322, + "TP": 4360, + "n_pred": 6181, + "n_ref": 4737 + }, + "2": { + "Dice": 0.6901133255177804, + "FN": 1227, + "FP": 359, + "IoU": 0.5268496420047732, + "TN": 415528, + "TP": 1766, + "n_pred": 2125, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8864197530864197, + "FN": 229, + "FP": 323, + "IoU": 0.7960088691796009, + "TN": 416174, + "TP": 2154, + "n_pred": 2477, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9495741420476819, + "FN": 243, + "FP": 1172, + "IoU": 0.9039896865246302, + "TN": 481772, + "TP": 13323, + "n_pred": 14495, + "n_ref": 13566 + }, + "2": { + "Dice": 0.9092573221757322, + "FN": 718, + "FP": 670, + "IoU": 0.8336130424358666, + "TN": 488168, + "TP": 6954, + "n_pred": 7624, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9681391216044681, + "FN": 145, + "FP": 357, + "IoU": 0.9382457866896298, + "TN": 488381, + "TP": 7627, + "n_pred": 7984, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8470197300103842, + "FN": 3066, + "FP": 617, + "IoU": 0.734635060162836, + "TN": 482631, + "TP": 10196, + "n_pred": 10813, + "n_ref": 13262 + }, + "2": { + "Dice": 0.9185158016993704, + "FN": 963, + "FP": 370, + "IoU": 0.8493104227899616, + "TN": 487664, + "TP": 7513, + "n_pred": 7883, + "n_ref": 8476 + }, + "3": { + "Dice": 0.93008862005908, + "FN": 94, + "FP": 403, + "IoU": 0.8693136997107547, + "TN": 492707, + "TP": 3306, + "n_pred": 3709, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_002/summary_cross_val.json b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_002/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..0b721da510de3a5b07f34987d2c26ec0dcdbc79d --- /dev/null +++ b/nnActive_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/loop_002/summary_cross_val.json @@ -0,0 +1,5640 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8762837478654283, + "FN": 248.38888888888889, + "FP": 224.26666666666665, + "IoU": 0.8015696224186856, + "TN": 15966.88888888889, + "TP": 2120.4555555555557, + "n_pred": 2344.722222222222, + "n_ref": 2368.8444444444444 + }, + "mean": { + "1": { + "Dice": 0.8475592555393884, + "FN": 402.6666666666667, + "FP": 255.8, + "IoU": 0.7619532193161456, + "TN": 15836.566666666668, + "TP": 2064.9666666666667, + "n_pred": 2320.766666666667, + "n_ref": 2467.633333333333 + }, + "2": { + "Dice": 0.8893426100362238, + "FN": 209.6, + "FP": 295.3333333333333, + "IoU": 0.8038608015332341, + "TN": 15968.8, + "TP": 2086.266666666667, + "n_pred": 2381.6, + "n_ref": 2295.866666666667 + }, + "3": { + "Dice": 0.891949378020673, + "FN": 132.9, + "FP": 121.66666666666667, + "IoU": 0.8388948464066771, + "TN": 16095.3, + "TP": 2210.133333333333, + "n_pred": 2331.8, + "n_ref": 2343.0333333333333 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8387096774193549, + "FN": 3, + "FP": 2, + "IoU": 0.7222222222222222, + "TN": 12782, + "TP": 13, + "n_pred": 15, + "n_ref": 16 + }, + "2": { + "Dice": 0.8717122920021471, + "FN": 60, + "FP": 179, + "IoU": 0.7725975261655567, + "TN": 11749, + "TP": 812, + "n_pred": 991, + "n_ref": 872 + }, + "3": { + "Dice": 0.9670646356525319, + "FN": 156, + "FP": 4, + "IoU": 0.936229573535273, + "TN": 10291, + "TP": 2349, + "n_pred": 2353, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9514178940426468, + "FN": 144, + "FP": 77, + "IoU": 0.9073375262054507, + "TN": 16815, + "TP": 2164, + "n_pred": 2241, + "n_ref": 2308 + }, + "2": { + "Dice": 0.9259563290100148, + "FN": 204, + "FP": 247, + "IoU": 0.8621216753286457, + "TN": 15929, + "TP": 2820, + "n_pred": 3067, + "n_ref": 3024 + }, + "3": { + "Dice": 0.9766349040595222, + "FN": 113, + "FP": 66, + "IoU": 0.9543367346938776, + "TN": 15280, + "TP": 3741, + "n_pred": 3807, + "n_ref": 3854 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7903921166084993, + "FN": 3964, + "FP": 120, + "IoU": 0.653428377460964, + "TN": 13816, + "TP": 7700, + "n_pred": 7820, + "n_ref": 11664 + }, + "2": { + "Dice": 0.8968119222788153, + "FN": 285, + "FP": 262, + "IoU": 0.8129274965800274, + "TN": 22676, + "TP": 2377, + "n_pred": 2639, + "n_ref": 2662 + }, + "3": { + "Dice": 0.9588187038556194, + "FN": 70, + "FP": 181, + "IoU": 0.9208950520012606, + "TN": 22427, + "TP": 2922, + "n_pred": 3103, + "n_ref": 2992 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9322572756175104, + "FN": 204, + "FP": 73, + "IoU": 0.8731103985341273, + "TN": 10617, + "TP": 1906, + "n_pred": 1979, + "n_ref": 2110 + }, + "2": { + "Dice": 0.9036458333333334, + "FN": 21, + "FP": 53, + "IoU": 0.8242280285035629, + "TN": 12379, + "TP": 347, + "n_pred": 400, + "n_ref": 368 + }, + "3": { + "Dice": 0.9623329283110571, + "FN": 20, + "FP": 11, + "IoU": 0.927400468384075, + "TN": 12373, + "TP": 396, + "n_pred": 407, + "n_ref": 416 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9368495742667928, + "FN": 211, + "FP": 323, + "IoU": 0.8812013348164628, + "TN": 27505, + "TP": 3961, + "n_pred": 4284, + "n_ref": 4172 + }, + "2": { + "Dice": 0.8522232734153264, + "FN": 504, + "FP": 277, + "IoU": 0.7424991757335971, + "TN": 28967, + "TP": 2252, + "n_pred": 2529, + "n_ref": 2756 + }, + "3": { + "Dice": 0.9722711267605634, + "FN": 180, + "FP": 72, + "IoU": 0.9460385438972163, + "TN": 27330, + "TP": 4418, + "n_pred": 4490, + "n_ref": 4598 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.754454987271465, + "FN": 3134, + "FP": 49, + "IoU": 0.6057227796358231, + "TN": 23927, + "TP": 4890, + "n_pred": 4939, + "n_ref": 8024 + }, + "2": { + "Dice": 0.8978168195323601, + "FN": 273, + "FP": 518, + "IoU": 0.8145804031879981, + "TN": 27734, + "TP": 3475, + "n_pred": 3993, + "n_ref": 3748 + }, + "3": { + "Dice": 0.9811295413336915, + "FN": 175, + "FP": 106, + "IoU": 0.9629580806749275, + "TN": 24414, + "TP": 7305, + "n_pred": 7411, + "n_ref": 7480 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9793570915066242, + "FN": 76, + "FP": 125, + "IoU": 0.9595492050714429, + "TN": 7831, + "TP": 4768, + "n_pred": 4893, + "n_ref": 4844 + }, + "2": { + "Dice": 0.8597701149425288, + "FN": 196, + "FP": 292, + "IoU": 0.7540322580645161, + "TN": 10816, + "TP": 1496, + "n_pred": 1788, + "n_ref": 1692 + }, + "3": { + "Dice": 0.9686966420034149, + "FN": 189, + "FP": 86, + "IoU": 0.9392935982339956, + "TN": 8270, + "TP": 4255, + "n_pred": 4341, + "n_ref": 4444 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9869893312516264, + "FN": 31, + "FP": 69, + "IoU": 0.9743128692525045, + "TN": 8907, + "TP": 3793, + "n_pred": 3862, + "n_ref": 3824 + }, + "2": { + "Dice": 0.9335503119066992, + "FN": 156, + "FP": 89, + "IoU": 0.875381485249237, + "TN": 10834, + "TP": 1721, + "n_pred": 1810, + "n_ref": 1877 + }, + "3": { + "Dice": 0.9873060648801129, + "FN": 76, + "FP": 23, + "IoU": 0.9749303621169917, + "TN": 8851, + "TP": 3850, + "n_pred": 3873, + "n_ref": 3926 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9033241842025007, + "FN": 37, + "FP": 280, + "IoU": 0.8236929922135706, + "TN": 17402, + "TP": 1481, + "n_pred": 1761, + "n_ref": 1518 + }, + "2": { + "Dice": 0.8974661166764879, + "FN": 266, + "FP": 82, + "IoU": 0.8140032068412614, + "TN": 17329, + "TP": 1523, + "n_pred": 1605, + "n_ref": 1789 + }, + "3": { + "Dice": 0.7701612903225806, + "FN": 82, + "FP": 32, + "IoU": 0.6262295081967213, + "TN": 18895, + "TP": 191, + "n_pred": 223, + "n_ref": 273 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9625529143601432, + "FN": 88, + "FP": 27, + "IoU": 0.9278091650973007, + "TN": 4807, + "TP": 1478, + "n_pred": 1505, + "n_ref": 1566 + }, + "2": { + "Dice": 0.9189814814814815, + "FN": 10, + "FP": 130, + "IoU": 0.8501070663811563, + "TN": 5466, + "TP": 794, + "n_pred": 924, + "n_ref": 804 + }, + "3": { + "Dice": 0.9532428355957768, + "FN": 60, + "FP": 2, + "IoU": 0.9106628242074928, + "TN": 5706, + "TP": 632, + "n_pred": 634, + "n_ref": 692 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9438202247191011, + "FN": 18, + "FP": 2, + "IoU": 0.8936170212765957, + "TN": 6212, + "TP": 168, + "n_pred": 170, + "n_ref": 186 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 6396, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6581867388362652, + "FN": 1170, + "FP": 93, + "IoU": 0.49052037111738606, + "TN": 29521, + "TP": 1216, + "n_pred": 1309, + "n_ref": 2386 + }, + "2": { + "Dice": 0.941789489355367, + "FN": 241, + "FP": 150, + "IoU": 0.8899831176139561, + "TN": 28446, + "TP": 3163, + "n_pred": 3313, + "n_ref": 3404 + }, + "3": { + "Dice": 0.9305949008498584, + "FN": 25, + "FP": 73, + "IoU": 0.8701986754966887, + "TN": 31245, + "TP": 657, + "n_pred": 730, + "n_ref": 682 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8159203980099502, + "FN": 82, + "FP": 29, + "IoU": 0.6890756302521008, + "TN": 38043, + "TP": 246, + "n_pred": 275, + "n_ref": 328 + }, + "2": { + "Dice": 0.9310991470570443, + "FN": 624, + "FP": 515, + "IoU": 0.8710809281267685, + "TN": 29565, + "TP": 7696, + "n_pred": 8211, + "n_ref": 8320 + }, + "3": { + "Dice": 0.8988223984619081, + "FN": 130, + "FP": 291, + "IoU": 0.8162374508948058, + "TN": 36109, + "TP": 1870, + "n_pred": 2161, + "n_ref": 2000 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9329872581406323, + "FN": 221, + "FP": 63, + "IoU": 0.874391862007961, + "TN": 23339, + "TP": 1977, + "n_pred": 2040, + "n_ref": 2198 + }, + "2": { + "Dice": 0.9000951474785919, + "FN": 200, + "FP": 220, + "IoU": 0.8183391003460208, + "TN": 23288, + "TP": 1892, + "n_pred": 2112, + "n_ref": 2092 + }, + "3": { + "Dice": 0.8868035190615836, + "FN": 172, + "FP": 21, + "IoU": 0.7966280295047419, + "TN": 24651, + "TP": 756, + "n_pred": 777, + "n_ref": 928 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9608884596813134, + "FN": 35, + "FP": 46, + "IoU": 0.9247211895910781, + "TN": 11724, + "TP": 995, + "n_pred": 1041, + "n_ref": 1030 + }, + "2": { + "Dice": 0.9093922651933701, + "FN": 126, + "FP": 202, + "IoU": 0.8338399189463019, + "TN": 10826, + "TP": 1646, + "n_pred": 1848, + "n_ref": 1772 + }, + "3": { + "Dice": 0.9217318900915903, + "FN": 147, + "FP": 41, + "IoU": 0.8548262548262548, + "TN": 11505, + "TP": 1107, + "n_pred": 1148, + "n_ref": 1254 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9093175444063571, + "FN": 103, + "FP": 188, + "IoU": 0.8337142857142857, + "TN": 36650, + "TP": 1459, + "n_pred": 1647, + "n_ref": 1562 + }, + "2": { + "Dice": 0.9239473046148873, + "FN": 694, + "FP": 247, + "IoU": 0.8586450353011867, + "TN": 31743, + "TP": 5716, + "n_pred": 5963, + "n_ref": 6410 + }, + "3": { + "Dice": 0.9115606936416185, + "FN": 241, + "FP": 65, + "IoU": 0.8374933616569304, + "TN": 36517, + "TP": 1577, + "n_pred": 1642, + "n_ref": 1818 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6911242603550296, + "FN": 514, + "FP": 8, + "IoU": 0.5280289330922242, + "TN": 11694, + "TP": 584, + "n_pred": 592, + "n_ref": 1098 + }, + "2": { + "Dice": 0.8848039215686274, + "FN": 390, + "FP": 174, + "IoU": 0.7934065934065934, + "TN": 10070, + "TP": 2166, + "n_pred": 2340, + "n_ref": 2556 + }, + "3": { + "Dice": 0.7444253859348199, + "FN": 1019, + "FP": 24, + "IoU": 0.592896174863388, + "TN": 10238, + "TP": 1519, + "n_pred": 1543, + "n_ref": 2538 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.756201881950385, + "FN": 42, + "FP": 813, + "IoU": 0.6079779917469051, + "TN": 23419, + "TP": 1326, + "n_pred": 2139, + "n_ref": 1368 + }, + "2": { + "Dice": 0.9022806725486932, + "FN": 318, + "FP": 269, + "IoU": 0.8219593569912041, + "TN": 22303, + "TP": 2710, + "n_pred": 2979, + "n_ref": 3028 + }, + "3": { + "Dice": 0.9603535353535354, + "FN": 179, + "FP": 135, + "IoU": 0.9237308719941705, + "TN": 21483, + "TP": 3803, + "n_pred": 3938, + "n_ref": 3982 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9746682750301568, + "FN": 42, + "FP": 21, + "IoU": 0.9505882352941176, + "TN": 24325, + "TP": 1212, + "n_pred": 1233, + "n_ref": 1254 + }, + "2": { + "Dice": 0.8473218051455083, + "FN": 289, + "FP": 435, + "IoU": 0.7350896450786681, + "TN": 22867, + "TP": 2009, + "n_pred": 2444, + "n_ref": 2298 + }, + "3": { + "Dice": 0.969971671388102, + "FN": 68, + "FP": 144, + "IoU": 0.9416941694169417, + "TN": 21964, + "TP": 3424, + "n_pred": 3568, + "n_ref": 3492 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9740720014922589, + "FN": 66, + "FP": 212, + "IoU": 0.9494545454545454, + "TN": 13700, + "TP": 5222, + "n_pred": 5434, + "n_ref": 5288 + }, + "2": { + "Dice": 0.8266045548654244, + "FN": 169, + "FP": 501, + "IoU": 0.7044552271724747, + "TN": 16933, + "TP": 1597, + "n_pred": 2098, + "n_ref": 1766 + }, + "3": { + "Dice": 0.9530075187969925, + "FN": 81, + "FP": 69, + "IoU": 0.9102333931777379, + "TN": 17529, + "TP": 1521, + "n_pred": 1590, + "n_ref": 1602 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9079263410728583, + "FN": 147, + "FP": 198, + "IoU": 0.8313782991202346, + "TN": 10754, + "TP": 1701, + "n_pred": 1899, + "n_ref": 1848 + }, + "2": { + "Dice": 0.8738548273431994, + "FN": 158, + "FP": 558, + "IoU": 0.7759699624530664, + "TN": 9604, + "TP": 2480, + "n_pred": 3038, + "n_ref": 2638 + }, + "3": { + "Dice": 0.9477030678747417, + "FN": 241, + "FP": 88, + "IoU": 0.9006042296072507, + "TN": 9490, + "TP": 2981, + "n_pred": 3069, + "n_ref": 3222 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6158549901725268, + "FN": 72, + "FP": 1687, + "IoU": 0.44493531082360366, + "TN": 9631, + "TP": 1410, + "n_pred": 3097, + "n_ref": 1482 + }, + "2": { + "Dice": 0.888421052631579, + "FN": 162, + "FP": 368, + "IoU": 0.7992424242424242, + "TN": 10160, + "TP": 2110, + "n_pred": 2478, + "n_ref": 2272 + }, + "3": { + "Dice": 0.9762292412894823, + "FN": 153, + "FP": 66, + "IoU": 0.9535623409669212, + "TN": 8084, + "TP": 4497, + "n_pred": 4563, + "n_ref": 4650 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4588957055214724, + "FN": 259, + "FP": 1064, + "IoU": 0.29777070063694266, + "TN": 17316, + "TP": 561, + "n_pred": 1625, + "n_ref": 820 + }, + "2": { + "Dice": 0.8608163265306122, + "FN": 133, + "FP": 549, + "IoU": 0.7556431386599785, + "TN": 16409, + "TP": 2109, + "n_pred": 2658, + "n_ref": 2242 + }, + "3": { + "Dice": 0.9707764136261456, + "FN": 149, + "FP": 20, + "IoU": 0.9432123655913979, + "TN": 16224, + "TP": 2807, + "n_pred": 2827, + "n_ref": 2956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9270166453265045, + "FN": 58, + "FP": 56, + "IoU": 0.863961813842482, + "TN": 5562, + "TP": 724, + "n_pred": 780, + "n_ref": 782 + }, + "3": { + "Dice": 0.9870206489675516, + "FN": 10, + "FP": 34, + "IoU": 0.9743739079790332, + "TN": 4683, + "TP": 1673, + "n_pred": 1707, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8959056210964608, + "FN": 504, + "FP": 96, + "IoU": 0.8114393463230672, + "TN": 3218, + "TP": 2582, + "n_pred": 2678, + "n_ref": 3086 + }, + "2": { + "Dice": 0.962080173347779, + "FN": 34, + "FP": 71, + "IoU": 0.9269311064718163, + "TN": 4963, + "TP": 1332, + "n_pred": 1403, + "n_ref": 1366 + }, + "3": { + "Dice": 0.9824355971896955, + "FN": 17, + "FP": 13, + "IoU": 0.9654775604142692, + "TN": 5531, + "TP": 839, + "n_pred": 852, + "n_ref": 856 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.40266469282013323, + "FN": 174, + "FP": 1440, + "IoU": 0.2520852641334569, + "TN": 10642, + "TP": 544, + "n_pred": 1984, + "n_ref": 718 + }, + "2": { + "Dice": 0.8325498460042147, + "FN": 56, + "FP": 977, + "IoU": 0.7131352402110525, + "TN": 9199, + "TP": 2568, + "n_pred": 3545, + "n_ref": 2624 + }, + "3": { + "Dice": 0.6951833213515457, + "FN": 95, + "FP": 753, + "IoU": 0.5327823691460055, + "TN": 10985, + "TP": 967, + "n_pred": 1720, + "n_ref": 1062 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.920956895601367, + "FN": 659, + "FP": 58, + "IoU": 0.8534940743767879, + "TN": 20706, + "TP": 4177, + "n_pred": 4235, + "n_ref": 4836 + }, + "2": { + "Dice": 0.8391432171356573, + "FN": 484, + "FP": 282, + "IoU": 0.7228654124457308, + "TN": 22836, + "TP": 1998, + "n_pred": 2280, + "n_ref": 2482 + }, + "3": { + "Dice": 0.9612875163114397, + "FN": 59, + "FP": 208, + "IoU": 0.9254606365159129, + "TN": 22018, + "TP": 3315, + "n_pred": 3523, + "n_ref": 3374 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9728575785300396, + "FN": 41, + "FP": 48, + "IoU": 0.9471496437054632, + "TN": 4716, + "TP": 1595, + "n_pred": 1643, + "n_ref": 1636 + }, + "2": { + "Dice": 0.9148936170212766, + "FN": 71, + "FP": 97, + "IoU": 0.8431372549019608, + "TN": 5329, + "TP": 903, + "n_pred": 1000, + "n_ref": 974 + }, + "3": { + "Dice": 0.9691211401425178, + "FN": 26, + "FP": 52, + "IoU": 0.9400921658986175, + "TN": 5098, + "TP": 1224, + "n_pred": 1276, + "n_ref": 1250 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9585921325051759, + "FN": 16, + "FP": 104, + "IoU": 0.9204771371769384, + "TN": 11291, + "TP": 1389, + "n_pred": 1493, + "n_ref": 1405 + }, + "2": { + "Dice": 0.9012629161882894, + "FN": 77, + "FP": 95, + "IoU": 0.8202716823406478, + "TN": 11843, + "TP": 785, + "n_pred": 880, + "n_ref": 862 + }, + "3": { + "Dice": 0.9617662897145934, + "FN": 31, + "FP": 40, + "IoU": 0.9263485477178424, + "TN": 11836, + "TP": 893, + "n_pred": 933, + "n_ref": 924 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8883333333333333, + "FN": 41, + "FP": 361, + "IoU": 0.7991004497751124, + "TN": 17199, + "TP": 1599, + "n_pred": 1960, + "n_ref": 1640 + }, + "2": { + "Dice": 0.7111506524317912, + "FN": 11, + "FP": 963, + "IoU": 0.5517717441325357, + "TN": 17027, + "TP": 1199, + "n_pred": 2162, + "n_ref": 1210 + }, + "3": { + "Dice": 0.6320279177975959, + "FN": 23, + "FP": 926, + "IoU": 0.46201814058956914, + "TN": 17436, + "TP": 815, + "n_pred": 1741, + "n_ref": 838 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8887851229485091, + "FN": 223.91111111111113, + "FP": 246.88888888888889, + "IoU": 0.8170729076584465, + "TN": 16865.355555555554, + "TP": 2503.8444444444444, + "n_pred": 2750.7333333333336, + "n_ref": 2727.755555555556 + }, + "mean": { + "1": { + "Dice": 0.8514065420245985, + "FN": 262.0, + "FP": 336.3333333333333, + "IoU": 0.7780525748475152, + "TN": 16183.333333333334, + "TP": 3058.3333333333335, + "n_pred": 3394.6666666666665, + "n_ref": 3320.3333333333335 + }, + "2": { + "Dice": 0.8849636440511274, + "FN": 279.53333333333336, + "FP": 262.43333333333334, + "IoU": 0.7958988601835832, + "TN": 17203.433333333334, + "TP": 2094.6, + "n_pred": 2357.0333333333333, + "n_ref": 2374.133333333333 + }, + "3": { + "Dice": 0.9299851827698012, + "FN": 130.2, + "FP": 141.9, + "IoU": 0.877267287944241, + "TN": 17209.3, + "TP": 2358.6, + "n_pred": 2500.5, + "n_ref": 2488.8 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7810734463276836, + "FN": 133, + "FP": 177, + "IoU": 0.6407879490150638, + "TN": 37537, + "TP": 553, + "n_pred": 730, + "n_ref": 686 + }, + "2": { + "Dice": 0.831340206185567, + "FN": 452, + "FP": 775, + "IoU": 0.7113620324629499, + "TN": 34149, + "TP": 3024, + "n_pred": 3799, + "n_ref": 3476 + }, + "3": { + "Dice": 0.9695746356833399, + "FN": 255, + "FP": 363, + "IoU": 0.940946010511228, + "TN": 27935, + "TP": 9847, + "n_pred": 10210, + "n_ref": 10102 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4757013038324773, + "FN": 976, + "FP": 351, + "IoU": 0.31207879730430277, + "TN": 23671, + "TP": 602, + "n_pred": 953, + "n_ref": 1578 + }, + "2": { + "Dice": 0.8604679064187163, + "FN": 706, + "FP": 457, + "IoU": 0.7551063381764582, + "TN": 20851, + "TP": 3586, + "n_pred": 4043, + "n_ref": 4292 + }, + "3": { + "Dice": 0.9523114355231144, + "FN": 332, + "FP": 60, + "IoU": 0.9089642359498374, + "TN": 21294, + "TP": 3914, + "n_pred": 3974, + "n_ref": 4246 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8347511857261161, + "FN": 104, + "FP": 2091, + "IoU": 0.716371624240858, + "TN": 11461, + "TP": 5544, + "n_pred": 7635, + "n_ref": 5648 + }, + "2": { + "Dice": 0.8831896551724138, + "FN": 237, + "FP": 305, + "IoU": 0.7908143573909687, + "TN": 16609, + "TP": 2049, + "n_pred": 2354, + "n_ref": 2286 + }, + "3": { + "Dice": 0.9509246088193457, + "FN": 236, + "FP": 40, + "IoU": 0.9064406779661017, + "TN": 16250, + "TP": 2674, + "n_pred": 2714, + "n_ref": 2910 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9523809523809523, + "FN": 92, + "FP": 359, + "IoU": 0.9090909090909091, + "TN": 27039, + "TP": 4510, + "n_pred": 4869, + "n_ref": 4602 + }, + "2": { + "Dice": 0.8739407705075566, + "FN": 788, + "FP": 655, + "IoU": 0.7761055081458494, + "TN": 25555, + "TP": 5002, + "n_pred": 5657, + "n_ref": 5790 + }, + "3": { + "Dice": 0.9606114050558495, + "FN": 392, + "FP": 144, + "IoU": 0.9242081447963801, + "TN": 24928, + "TP": 6536, + "n_pred": 6680, + "n_ref": 6928 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9880717573025265, + "FN": 22, + "FP": 105, + "IoU": 0.976424726192686, + "TN": 1013, + "TP": 5260, + "n_pred": 5365, + "n_ref": 5282 + }, + "2": { + "Dice": 0.9144385026737968, + "FN": 24, + "FP": 40, + "IoU": 0.8423645320197044, + "TN": 5994, + "TP": 342, + "n_pred": 382, + "n_ref": 366 + }, + "3": { + "Dice": 0.968944099378882, + "FN": 18, + "FP": 7, + "IoU": 0.9397590361445783, + "TN": 5985, + "TP": 390, + "n_pred": 397, + "n_ref": 408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9605355884425651, + "FN": 246, + "FP": 90, + "IoU": 0.9240677966101695, + "TN": 8375, + "TP": 4089, + "n_pred": 4179, + "n_ref": 4335 + }, + "2": { + "Dice": 0.9007278020378457, + "FN": 128, + "FP": 213, + "IoU": 0.819385593220339, + "TN": 10912, + "TP": 1547, + "n_pred": 1760, + "n_ref": 1675 + }, + "3": { + "Dice": 0.9773923815422731, + "FN": 100, + "FP": 46, + "IoU": 0.9557843731072078, + "TN": 9498, + "TP": 3156, + "n_pred": 3202, + "n_ref": 3256 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9296740994854202, + "FN": 142, + "FP": 350, + "IoU": 0.8685897435897436, + "TN": 2656, + "TP": 3252, + "n_pred": 3602, + "n_ref": 3394 + }, + "2": { + "Dice": 0.9036929761042722, + "FN": 96, + "FP": 37, + "IoU": 0.8243064729194187, + "TN": 5643, + "TP": 624, + "n_pred": 661, + "n_ref": 720 + }, + "3": { + "Dice": 0.9454545454545454, + "FN": 4, + "FP": 17, + "IoU": 0.896551724137931, + "TN": 6197, + "TP": 182, + "n_pred": 199, + "n_ref": 186 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8116788321167884, + "FN": 86, + "FP": 43, + "IoU": 0.683046683046683, + "TN": 25193, + "TP": 278, + "n_pred": 321, + "n_ref": 364 + }, + "2": { + "Dice": 0.9287356321839081, + "FN": 276, + "FP": 592, + "IoU": 0.8669527896995708, + "TN": 19076, + "TP": 5656, + "n_pred": 6248, + "n_ref": 5932 + }, + "3": { + "Dice": 0.542896050839764, + "FN": 110, + "FP": 897, + "IoU": 0.37258566978193147, + "TN": 23995, + "TP": 598, + "n_pred": 1495, + "n_ref": 708 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8897468897468898, + "FN": 440, + "FP": 74, + "IoU": 0.8013910355486863, + "TN": 16612, + "TP": 2074, + "n_pred": 2148, + "n_ref": 2514 + }, + "2": { + "Dice": 0.8849177984274482, + "FN": 220, + "FP": 424, + "IoU": 0.7935897435897435, + "TN": 16080, + "TP": 2476, + "n_pred": 2900, + "n_ref": 2696 + }, + "3": { + "Dice": 0.9085356052081659, + "FN": 102, + "FP": 467, + "IoU": 0.8324005891016201, + "TN": 15805, + "TP": 2826, + "n_pred": 3293, + "n_ref": 2928 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9595346484572584, + "FN": 112, + "FP": 208, + "IoU": 0.9222168206125425, + "TN": 15086, + "TP": 3794, + "n_pred": 4002, + "n_ref": 3906 + }, + "2": { + "Dice": 0.9160671462829736, + "FN": 102, + "FP": 318, + "IoU": 0.8451327433628318, + "TN": 16488, + "TP": 2292, + "n_pred": 2610, + "n_ref": 2394 + }, + "3": { + "Dice": 0.9787234042553191, + "FN": 100, + "FP": 32, + "IoU": 0.9583333333333334, + "TN": 16032, + "TP": 3036, + "n_pred": 3068, + "n_ref": 3136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9413173652694611, + "FN": 175, + "FP": 266, + "IoU": 0.8891402714932126, + "TN": 21622, + "TP": 3537, + "n_pred": 3803, + "n_ref": 3712 + }, + "2": { + "Dice": 0.9213572854291417, + "FN": 269, + "FP": 519, + "IoU": 0.8541820873427091, + "TN": 20196, + "TP": 4616, + "n_pred": 5135, + "n_ref": 4885 + }, + "3": { + "Dice": 0.9634687606691703, + "FN": 255, + "FP": 66, + "IoU": 0.9295125164690382, + "TN": 21046, + "TP": 4233, + "n_pred": 4299, + "n_ref": 4488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9066666666666666, + "FN": 248, + "FP": 389, + "IoU": 0.8292682926829268, + "TN": 9069, + "TP": 3094, + "n_pred": 3483, + "n_ref": 3342 + }, + "2": { + "Dice": 0.8951437066402379, + "FN": 370, + "FP": 159, + "IoU": 0.8101901686401148, + "TN": 10013, + "TP": 2258, + "n_pred": 2417, + "n_ref": 2628 + }, + "3": { + "Dice": 0.9571788413098237, + "FN": 42, + "FP": 230, + "IoU": 0.9178743961352657, + "TN": 9488, + "TP": 3040, + "n_pred": 3270, + "n_ref": 3082 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 800, + "IoU": 0.0, + "TN": 31200, + "TP": 0, + "n_pred": 800, + "n_ref": 0 + }, + "2": { + "Dice": 0.8227669766131305, + "FN": 402, + "FP": 227, + "IoU": 0.6988989947343226, + "TN": 29911, + "TP": 1460, + "n_pred": 1687, + "n_ref": 1862 + }, + "3": { + "Dice": 0.961525366019748, + "FN": 180, + "FP": 46, + "IoU": 0.9259016393442623, + "TN": 28950, + "TP": 2824, + "n_pred": 2870, + "n_ref": 3004 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9103139013452914, + "FN": 63, + "FP": 137, + "IoU": 0.8353909465020576, + "TN": 11585, + "TP": 1015, + "n_pred": 1152, + "n_ref": 1078 + }, + "2": { + "Dice": 0.9148830263812843, + "FN": 263, + "FP": 250, + "IoU": 0.8431192660550458, + "TN": 9530, + "TP": 2757, + "n_pred": 3007, + "n_ref": 3020 + }, + "3": { + "Dice": 0.9765438008616563, + "FN": 164, + "FP": 179, + "IoU": 0.9541627689429373, + "TN": 5317, + "TP": 7140, + "n_pred": 7319, + "n_ref": 7304 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9372477064220184, + "FN": 91, + "FP": 80, + "IoU": 0.8819060773480663, + "TN": 17752, + "TP": 1277, + "n_pred": 1357, + "n_ref": 1368 + }, + "2": { + "Dice": 0.8074772886093641, + "FN": 975, + "FP": 127, + "IoU": 0.6771169059478465, + "TN": 15787, + "TP": 2311, + "n_pred": 2438, + "n_ref": 3286 + }, + "3": { + "Dice": 0.9076597033000303, + "FN": 227, + "FP": 78, + "IoU": 0.8309312638580931, + "TN": 17396, + "TP": 1499, + "n_pred": 1577, + "n_ref": 1726 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9110570424439037, + "FN": 312, + "FP": 17, + "IoU": 0.836643495531281, + "TN": 17186, + "TP": 1685, + "n_pred": 1702, + "n_ref": 1997 + }, + "2": { + "Dice": 0.9020852221214869, + "FN": 79, + "FP": 137, + "IoU": 0.8216350123864574, + "TN": 17989, + "TP": 995, + "n_pred": 1132, + "n_ref": 1074 + }, + "3": { + "Dice": 0.9246619446233098, + "FN": 88, + "FP": 29, + "IoU": 0.859880239520958, + "TN": 18365, + "TP": 718, + "n_pred": 747, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7624438155485267, + "FN": 662, + "FP": 765, + "IoU": 0.6160882432068873, + "TN": 34683, + "TP": 2290, + "n_pred": 3055, + "n_ref": 2952 + }, + "2": { + "Dice": 0.9214786832164058, + "FN": 227, + "FP": 355, + "IoU": 0.8543907930948211, + "TN": 34403, + "TP": 3415, + "n_pred": 3770, + "n_ref": 3642 + }, + "3": { + "Dice": 0.9301453352086263, + "FN": 118, + "FP": 31, + "IoU": 0.8694127957931639, + "TN": 37259, + "TP": 992, + "n_pred": 1023, + "n_ref": 1110 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9781983708672736, + "FN": 33, + "FP": 149, + "IoU": 0.9573270808909731, + "TN": 8535, + "TP": 4083, + "n_pred": 4232, + "n_ref": 4116 + }, + "2": { + "Dice": 0.9311568488289567, + "FN": 80, + "FP": 17, + "IoU": 0.8711819389110226, + "TN": 12047, + "TP": 656, + "n_pred": 673, + "n_ref": 736 + }, + "3": { + "Dice": 0.9873536299765808, + "FN": 14, + "FP": 13, + "IoU": 0.9750231267345051, + "TN": 11719, + "TP": 1054, + "n_pred": 1067, + "n_ref": 1068 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8408877774304471, + "FN": 167, + "FP": 342, + "IoU": 0.7254584681769147, + "TN": 10946, + "TP": 1345, + "n_pred": 1687, + "n_ref": 1512 + }, + "2": { + "Dice": 0.9208329820419864, + "FN": 705, + "FP": 234, + "IoU": 0.85328125, + "TN": 6400, + "TP": 5461, + "n_pred": 5695, + "n_ref": 6166 + }, + "3": { + "Dice": 0.9442590120160214, + "FN": 197, + "FP": 137, + "IoU": 0.8944040467910211, + "TN": 9637, + "TP": 2829, + "n_pred": 2966, + "n_ref": 3026 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8957604589338184, + "FN": 142, + "FP": 603, + "IoU": 0.8112012164216929, + "TN": 15254, + "TP": 3201, + "n_pred": 3804, + "n_ref": 3343 + }, + "2": { + "Dice": 0.8339360222531293, + "FN": 367, + "FP": 230, + "IoU": 0.7151717557251909, + "TN": 17104, + "TP": 1499, + "n_pred": 1729, + "n_ref": 1866 + }, + "3": { + "Dice": 0.9399845831956833, + "FN": 415, + "FP": 130, + "IoU": 0.8867650114273842, + "TN": 14387, + "TP": 4268, + "n_pred": 4398, + "n_ref": 4683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9599759615384615, + "FN": 535, + "FP": 131, + "IoU": 0.9230324742863747, + "TN": 29747, + "TP": 7987, + "n_pred": 8118, + "n_ref": 8522 + }, + "2": { + "Dice": 0.8705650459921156, + "FN": 171, + "FP": 223, + "IoU": 0.7707969749854566, + "TN": 36681, + "TP": 1325, + "n_pred": 1548, + "n_ref": 1496 + }, + "3": { + "Dice": 0.8977272727272727, + "FN": 145, + "FP": 17, + "IoU": 0.8144329896907216, + "TN": 37527, + "TP": 711, + "n_pred": 728, + "n_ref": 856 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9838487295647036, + "FN": 238, + "FP": 90, + "IoU": 0.9682108935840279, + "TN": 21682, + "TP": 9990, + "n_pred": 10080, + "n_ref": 10228 + }, + "2": { + "Dice": 0.8379965457685665, + "FN": 245, + "FP": 224, + "IoU": 0.7211652794292509, + "TN": 30318, + "TP": 1213, + "n_pred": 1437, + "n_ref": 1458 + }, + "3": { + "Dice": 0.9228944246737841, + "FN": 151, + "FP": 44, + "IoU": 0.8568281938325991, + "TN": 30638, + "TP": 1167, + "n_pred": 1211, + "n_ref": 1318 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6, + "FN": 62, + "FP": 1630, + "IoU": 0.42857142857142855, + "TN": 22639, + "TP": 1269, + "n_pred": 2899, + "n_ref": 1331 + }, + "2": { + "Dice": 0.806432400238237, + "FN": 641, + "FP": 659, + "IoU": 0.6756487025948104, + "TN": 21592, + "TP": 2708, + "n_pred": 3367, + "n_ref": 3349 + }, + "3": { + "Dice": 0.8694237288135593, + "FN": 131, + "FP": 832, + "IoU": 0.7690093547613337, + "TN": 21431, + "TP": 3206, + "n_pred": 4038, + "n_ref": 3337 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9415692821368948, + "FN": 100, + "FP": 40, + "IoU": 0.889589905362776, + "TN": 11532, + "TP": 1128, + "n_pred": 1168, + "n_ref": 1228 + }, + "2": { + "Dice": 0.9005278116118555, + "FN": 87, + "FP": 158, + "IoU": 0.8190546528803545, + "TN": 11446, + "TP": 1109, + "n_pred": 1267, + "n_ref": 1196 + }, + "3": { + "Dice": 0.8960863697705803, + "FN": 6, + "FP": 71, + "IoU": 0.8117359413202934, + "TN": 12391, + "TP": 332, + "n_pred": 403, + "n_ref": 338 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.909178951899279, + "FN": 1193, + "FP": 495, + "IoU": 0.8334813061063431, + "TN": 15463, + "TP": 8449, + "n_pred": 8944, + "n_ref": 9642 + }, + "2": { + "Dice": 0.8429378531073446, + "FN": 233, + "FP": 184, + "IoU": 0.728515625, + "TN": 24064, + "TP": 1119, + "n_pred": 1303, + "n_ref": 1352 + }, + "3": { + "Dice": 0.9232183908045977, + "FN": 70, + "FP": 97, + "IoU": 0.8573868488471392, + "TN": 24429, + "TP": 1004, + "n_pred": 1101, + "n_ref": 1074 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8336643495531281, + "FN": 1300, + "FP": 40, + "IoU": 0.7147722435078757, + "TN": 1702, + "TP": 3358, + "n_pred": 3398, + "n_ref": 4658 + }, + "2": { + "Dice": 0.8806818181818182, + "FN": 101, + "FP": 67, + "IoU": 0.7868020304568528, + "TN": 5612, + "TP": 620, + "n_pred": 687, + "n_ref": 721 + }, + "3": { + "Dice": 0.9560269011898603, + "FN": 14, + "FP": 71, + "IoU": 0.9157581764122894, + "TN": 5391, + "TP": 924, + "n_pred": 995, + "n_ref": 938 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9765970904490828, + "FN": 46, + "FP": 176, + "IoU": 0.9542645241038319, + "TN": 1546, + "TP": 4632, + "n_pred": 4808, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9521044992743106, + "FN": 8, + "FP": 58, + "IoU": 0.9085872576177285, + "TN": 5678, + "TP": 656, + "n_pred": 714, + "n_ref": 664 + }, + "3": { + "Dice": 0.980544747081712, + "FN": 12, + "FP": 8, + "IoU": 0.9618320610687023, + "TN": 5876, + "TP": 504, + "n_pred": 512, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9675070028011205, + "FN": 140, + "FP": 92, + "IoU": 0.9370591427021161, + "TN": 21914, + "TP": 3454, + "n_pred": 3546, + "n_ref": 3594 + }, + "2": { + "Dice": 0.9190996211277023, + "FN": 134, + "FP": 229, + "IoU": 0.8503092783505155, + "TN": 23175, + "TP": 2062, + "n_pred": 2291, + "n_ref": 2196 + }, + "3": { + "Dice": 0.945514133551823, + "FN": 28, + "FP": 105, + "IoU": 0.8966588966588966, + "TN": 24313, + "TP": 1154, + "n_pred": 1259, + "n_ref": 1182 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8744901297956075, + "FN": 257.6111111111111, + "FP": 314.94444444444446, + "IoU": 0.7954222598663949, + "TN": 17830.522222222222, + "TP": 2290.2555555555555, + "n_pred": 2605.2000000000003, + "n_ref": 2547.866666666667 + }, + "mean": { + "1": { + "Dice": 0.8092627111413734, + "FN": 400.96666666666664, + "FP": 385.56666666666666, + "IoU": 0.7166648122274382, + "TN": 17792.5, + "TP": 2114.3, + "n_pred": 2499.866666666667, + "n_ref": 2515.266666666667 + }, + "2": { + "Dice": 0.8876499974145234, + "FN": 269.6333333333333, + "FP": 383.43333333333334, + "IoU": 0.8003384499917052, + "TN": 17559.466666666667, + "TP": 2480.8, + "n_pred": 2864.233333333333, + "n_ref": 2750.4333333333334 + }, + "3": { + "Dice": 0.9265576808309256, + "FN": 102.23333333333333, + "FP": 175.83333333333334, + "IoU": 0.8692635173800415, + "TN": 18139.6, + "TP": 2275.6666666666665, + "n_pred": 2451.5, + "n_ref": 2377.9 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.599929996499825, + "FN": 139, + "FP": 1004, + "IoU": 0.4285, + "TN": 30000, + "TP": 857, + "n_pred": 1861, + "n_ref": 996 + }, + "2": { + "Dice": 0.9064597941220349, + "FN": 258, + "FP": 369, + "IoU": 0.8289222373806275, + "TN": 28335, + "TP": 3038, + "n_pred": 3407, + "n_ref": 3296 + }, + "3": { + "Dice": 0.9691394658753709, + "FN": 164, + "FP": 44, + "IoU": 0.9401266551525619, + "TN": 28526, + "TP": 3266, + "n_pred": 3310, + "n_ref": 3430 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8420044685604852, + "FN": 217, + "FP": 278, + "IoU": 0.727122381477398, + "TN": 10986, + "TP": 1319, + "n_pred": 1597, + "n_ref": 1536 + }, + "3": { + "Dice": 0.9440214957456337, + "FN": 106, + "FP": 144, + "IoU": 0.8939779474130619, + "TN": 10442, + "TP": 2108, + "n_pred": 2252, + "n_ref": 2214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6437346437346437, + "FN": 760, + "FP": 400, + "IoU": 0.4746376811594203, + "TN": 42592, + "TP": 1048, + "n_pred": 1448, + "n_ref": 1808 + }, + "2": { + "Dice": 0.769002295126232, + "FN": 168, + "FP": 1543, + "IoU": 0.6246983987716604, + "TN": 40241, + "TP": 2848, + "n_pred": 4391, + "n_ref": 3016 + }, + "3": { + "Dice": 0.9034702832070204, + "FN": 101, + "FP": 383, + "IoU": 0.8239359767188068, + "TN": 42051, + "TP": 2265, + "n_pred": 2648, + "n_ref": 2366 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.653587802537584, + "FN": 113, + "FP": 3136, + "IoU": 0.48542920494140007, + "TN": 32086, + "TP": 3065, + "n_pred": 6201, + "n_ref": 3178 + }, + "2": { + "Dice": 0.9041147249039273, + "FN": 489, + "FP": 534, + "IoU": 0.8250085528566541, + "TN": 32554, + "TP": 4823, + "n_pred": 5357, + "n_ref": 5312 + }, + "3": { + "Dice": 0.9787451113756164, + "FN": 212, + "FP": 288, + "IoU": 0.9583749583749583, + "TN": 26388, + "TP": 11512, + "n_pred": 11800, + "n_ref": 11724 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8478543563068921, + "FN": 4, + "FP": 230, + "IoU": 0.7358916478555305, + "TN": 31114, + "TP": 652, + "n_pred": 882, + "n_ref": 656 + }, + "2": { + "Dice": 0.8319911574293384, + "FN": 337, + "FP": 1791, + "IoU": 0.7123158037042044, + "TN": 24603, + "TP": 5269, + "n_pred": 7060, + "n_ref": 5606 + }, + "3": { + "Dice": 0.7204301075268817, + "FN": 77, + "FP": 703, + "IoU": 0.5630252100840336, + "TN": 30215, + "TP": 1005, + "n_pred": 1708, + "n_ref": 1082 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5699391833188532, + "FN": 4424, + "FP": 31, + "IoU": 0.3985419198055893, + "TN": 18193, + "TP": 2952, + "n_pred": 2983, + "n_ref": 7376 + }, + "2": { + "Dice": 0.9071217591073186, + "FN": 316, + "FP": 250, + "IoU": 0.8300300300300301, + "TN": 22270, + "TP": 2764, + "n_pred": 3014, + "n_ref": 3080 + }, + "3": { + "Dice": 0.9690357773142949, + "FN": 70, + "FP": 123, + "IoU": 0.9399315281668222, + "TN": 22387, + "TP": 3020, + "n_pred": 3143, + "n_ref": 3090 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9182888448537125, + "FN": 409, + "FP": 292, + "IoU": 0.8489224137931034, + "TN": 20960, + "TP": 3939, + "n_pred": 4231, + "n_ref": 4348 + }, + "2": { + "Dice": 0.8777589134125636, + "FN": 795, + "FP": 213, + "IoU": 0.7821482602118003, + "TN": 20973, + "TP": 3619, + "n_pred": 3832, + "n_ref": 4414 + }, + "3": { + "Dice": 0.9419005416051206, + "FN": 85, + "FP": 151, + "IoU": 0.890181479758027, + "TN": 23451, + "TP": 1913, + "n_pred": 2064, + "n_ref": 1998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8507462686567164, + "FN": 43, + "FP": 217, + "IoU": 0.7402597402597403, + "TN": 30999, + "TP": 741, + "n_pred": 958, + "n_ref": 784 + }, + "2": { + "Dice": 0.8336011687363039, + "FN": 232, + "FP": 2046, + "IoU": 0.7146793587174348, + "TN": 24016, + "TP": 5706, + "n_pred": 7752, + "n_ref": 5938 + }, + "3": { + "Dice": 0.8307994114762138, + "FN": 193, + "FP": 842, + "IoU": 0.7105704697986577, + "TN": 28424, + "TP": 2541, + "n_pred": 3383, + "n_ref": 2734 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9319442110569652, + "FN": 265, + "FP": 140, + "IoU": 0.8725613593455003, + "TN": 16022, + "TP": 2773, + "n_pred": 2913, + "n_ref": 3038 + }, + "2": { + "Dice": 0.8904086738949124, + "FN": 509, + "FP": 148, + "IoU": 0.8024654239326519, + "TN": 15874, + "TP": 2669, + "n_pred": 2817, + "n_ref": 3178 + }, + "3": { + "Dice": 0.9209222886421862, + "FN": 196, + "FP": 267, + "IoU": 0.853434631212409, + "TN": 16041, + "TP": 2696, + "n_pred": 2963, + "n_ref": 2892 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9163879598662207, + "FN": 57, + "FP": 68, + "IoU": 0.845679012345679, + "TN": 18390, + "TP": 685, + "n_pred": 753, + "n_ref": 742 + }, + "2": { + "Dice": 0.912714906480257, + "FN": 503, + "FP": 421, + "IoU": 0.8394439617723719, + "TN": 13445, + "TP": 4831, + "n_pred": 5252, + "n_ref": 5334 + }, + "3": { + "Dice": 0.8780487804878049, + "FN": 224, + "FP": 96, + "IoU": 0.782608695652174, + "TN": 17728, + "TP": 1152, + "n_pred": 1248, + "n_ref": 1376 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9372631578947368, + "FN": 115, + "FP": 34, + "IoU": 0.881933438985737, + "TN": 11538, + "TP": 1113, + "n_pred": 1147, + "n_ref": 1228 + }, + "2": { + "Dice": 0.8603531300160514, + "FN": 612, + "FP": 258, + "IoU": 0.7549295774647887, + "TN": 9250, + "TP": 2680, + "n_pred": 2938, + "n_ref": 3292 + }, + "3": { + "Dice": 0.9603452926895063, + "FN": 126, + "FP": 168, + "IoU": 0.9237156201349248, + "TN": 8946, + "TP": 3560, + "n_pred": 3728, + "n_ref": 3686 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9286097691894794, + "FN": 218, + "FP": 48, + "IoU": 0.8667334669338678, + "TN": 17204, + "TP": 1730, + "n_pred": 1778, + "n_ref": 1948 + }, + "2": { + "Dice": 0.9308186068626674, + "FN": 410, + "FP": 463, + "IoU": 0.8705899792469611, + "TN": 12454, + "TP": 5873, + "n_pred": 6336, + "n_ref": 6283 + }, + "3": { + "Dice": 0.9118217054263565, + "FN": 299, + "FP": 65, + "IoU": 0.8379341050756901, + "TN": 16954, + "TP": 1882, + "n_pred": 1947, + "n_ref": 2181 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9693044212897776, + "FN": 150, + "FP": 68, + "IoU": 0.9404371584699454, + "TN": 9140, + "TP": 3442, + "n_pred": 3510, + "n_ref": 3592 + }, + "2": { + "Dice": 0.9339285714285714, + "FN": 25, + "FP": 49, + "IoU": 0.8760469011725294, + "TN": 12203, + "TP": 523, + "n_pred": 572, + "n_ref": 548 + }, + "3": { + "Dice": 0.9740394600207685, + "FN": 11, + "FP": 14, + "IoU": 0.9493927125506073, + "TN": 12306, + "TP": 469, + "n_pred": 483, + "n_ref": 480 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6355245809003579, + "FN": 87, + "FP": 1848, + "IoU": 0.4657647708448371, + "TN": 21978, + "TP": 1687, + "n_pred": 3535, + "n_ref": 1774 + }, + "2": { + "Dice": 0.8920716112531969, + "FN": 294, + "FP": 339, + "IoU": 0.8051708217913204, + "TN": 22351, + "TP": 2616, + "n_pred": 2955, + "n_ref": 2910 + }, + "3": { + "Dice": 0.9703610937173868, + "FN": 161, + "FP": 123, + "IoU": 0.9424285424690857, + "TN": 20667, + "TP": 4649, + "n_pred": 4772, + "n_ref": 4810 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 708, + "IoU": 0.0, + "TN": 18492, + "TP": 0, + "n_pred": 708, + "n_ref": 0 + }, + "2": { + "Dice": 0.8818897637795275, + "FN": 74, + "FP": 196, + "IoU": 0.7887323943661971, + "TN": 17922, + "TP": 1008, + "n_pred": 1204, + "n_ref": 1082 + }, + "3": { + "Dice": 0.9676481279534714, + "FN": 57, + "FP": 32, + "IoU": 0.9373239436619718, + "TN": 17780, + "TP": 1331, + "n_pred": 1363, + "n_ref": 1388 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7837837837837838, + "FN": 243, + "FP": 829, + "IoU": 0.6444444444444445, + "TN": 16185, + "TP": 1943, + "n_pred": 2772, + "n_ref": 2186 + }, + "2": { + "Dice": 0.9329875801828852, + "FN": 146, + "FP": 345, + "IoU": 0.8743924277308774, + "TN": 15291, + "TP": 3418, + "n_pred": 3763, + "n_ref": 3564 + }, + "3": { + "Dice": 0.954781912765106, + "FN": 146, + "FP": 80, + "IoU": 0.9134762633996937, + "TN": 16588, + "TP": 2386, + "n_pred": 2466, + "n_ref": 2532 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9466089466089466, + "FN": 0, + "FP": 37, + "IoU": 0.8986301369863013, + "TN": 6035, + "TP": 328, + "n_pred": 365, + "n_ref": 328 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9428090832632464, + "FN": 134, + "FP": 138, + "IoU": 0.8918058870326173, + "TN": 16686, + "TP": 2242, + "n_pred": 2380, + "n_ref": 2376 + }, + "2": { + "Dice": 0.9442184013650086, + "FN": 235, + "FP": 190, + "IoU": 0.8943311785181501, + "TN": 15178, + "TP": 3597, + "n_pred": 3787, + "n_ref": 3832 + }, + "3": { + "Dice": 0.9646958740961293, + "FN": 80, + "FP": 86, + "IoU": 0.9317995069843878, + "TN": 16766, + "TP": 2268, + "n_pred": 2354, + "n_ref": 2348 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6782063963072865, + "FN": 1905, + "FP": 47, + "IoU": 0.5130955350461461, + "TN": 15191, + "TP": 2057, + "n_pred": 2104, + "n_ref": 3962 + }, + "2": { + "Dice": 0.8686829268292683, + "FN": 270, + "FP": 403, + "IoU": 0.7678509830976199, + "TN": 16301, + "TP": 2226, + "n_pred": 2629, + "n_ref": 2496 + }, + "3": { + "Dice": 0.9612124325712817, + "FN": 108, + "FP": 194, + "IoU": 0.9253214638971315, + "TN": 15156, + "TP": 3742, + "n_pred": 3936, + "n_ref": 3850 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9765471639632194, + "FN": 70, + "FP": 157, + "IoU": 0.9541691903896629, + "TN": 7847, + "TP": 4726, + "n_pred": 4883, + "n_ref": 4796 + }, + "2": { + "Dice": 0.9086294416243654, + "FN": 195, + "FP": 93, + "IoU": 0.8325581395348837, + "TN": 11080, + "TP": 1432, + "n_pred": 1525, + "n_ref": 1627 + }, + "3": { + "Dice": 0.9517702815723446, + "FN": 26, + "FP": 147, + "IoU": 0.9079787234042553, + "TN": 10920, + "TP": 1707, + "n_pred": 1854, + "n_ref": 1733 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9632902787219578, + "FN": 3, + "FP": 105, + "IoU": 0.9291803278688524, + "TN": 11275, + "TP": 1417, + "n_pred": 1522, + "n_ref": 1420 + }, + "2": { + "Dice": 0.9264787175234936, + "FN": 54, + "FP": 79, + "IoU": 0.86302780638517, + "TN": 11829, + "TP": 838, + "n_pred": 917, + "n_ref": 892 + }, + "3": { + "Dice": 0.9573283858998145, + "FN": 60, + "FP": 9, + "IoU": 0.9181494661921709, + "TN": 11957, + "TP": 774, + "n_pred": 783, + "n_ref": 834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8592814371257484, + "FN": 45, + "FP": 425, + "IoU": 0.7532808398950132, + "TN": 17295, + "TP": 1435, + "n_pred": 1860, + "n_ref": 1480 + }, + "2": { + "Dice": 0.9079237713139419, + "FN": 277, + "FP": 182, + "IoU": 0.831373989713446, + "TN": 16478, + "TP": 2263, + "n_pred": 2445, + "n_ref": 2540 + }, + "3": { + "Dice": 0.9579560155239327, + "FN": 41, + "FP": 89, + "IoU": 0.9193047796399751, + "TN": 17589, + "TP": 1481, + "n_pred": 1570, + "n_ref": 1522 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9386243386243386, + "FN": 82, + "FP": 34, + "IoU": 0.8843469591226321, + "TN": 5397, + "TP": 887, + "n_pred": 921, + "n_ref": 969 + }, + "3": { + "Dice": 0.9825834542815675, + "FN": 11, + "FP": 37, + "IoU": 0.9657631954350927, + "TN": 4998, + "TP": 1354, + "n_pred": 1391, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8732551647124511, + "FN": 654, + "FP": 481, + "IoU": 0.7750247770069376, + "TN": 7755, + "TP": 3910, + "n_pred": 4391, + "n_ref": 4564 + }, + "2": { + "Dice": 0.8327137546468402, + "FN": 131, + "FP": 274, + "IoU": 0.7133757961783439, + "TN": 11387, + "TP": 1008, + "n_pred": 1282, + "n_ref": 1139 + }, + "3": { + "Dice": 0.8847675568743818, + "FN": 29, + "FP": 437, + "IoU": 0.7933481152993348, + "TN": 10545, + "TP": 1789, + "n_pred": 2226, + "n_ref": 1818 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7472130159686653, + "FN": 799, + "FP": 40, + "IoU": 0.5964405964405964, + "TN": 10721, + "TP": 1240, + "n_pred": 1280, + "n_ref": 2039 + }, + "2": { + "Dice": 0.8940149625935162, + "FN": 75, + "FP": 95, + "IoU": 0.8083427282976324, + "TN": 11913, + "TP": 717, + "n_pred": 812, + "n_ref": 792 + }, + "3": { + "Dice": 0.9679633867276888, + "FN": 33, + "FP": 23, + "IoU": 0.9379157427937915, + "TN": 11898, + "TP": 846, + "n_pred": 869, + "n_ref": 879 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.974893459329257, + "FN": 361, + "FP": 181, + "IoU": 0.9510167193854496, + "TN": 27335, + "TP": 10523, + "n_pred": 10704, + "n_ref": 10884 + }, + "2": { + "Dice": 0.8755500792114065, + "FN": 551, + "FP": 156, + "IoU": 0.7786474639949906, + "TN": 35206, + "TP": 2487, + "n_pred": 2643, + "n_ref": 3038 + }, + "3": { + "Dice": 0.833592534992224, + "FN": 74, + "FP": 247, + "IoU": 0.7146666666666667, + "TN": 37275, + "TP": 804, + "n_pred": 1051, + "n_ref": 878 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8775900541919031, + "FN": 680, + "FP": 88, + "IoU": 0.7818801476853167, + "TN": 22079, + "TP": 2753, + "n_pred": 2841, + "n_ref": 3433 + }, + "2": { + "Dice": 0.8365122615803815, + "FN": 474, + "FP": 486, + "IoU": 0.7189695550351288, + "TN": 22184, + "TP": 2456, + "n_pred": 2942, + "n_ref": 2930 + }, + "3": { + "Dice": 0.9616158083413483, + "FN": 335, + "FP": 104, + "IoU": 0.9260693836308521, + "TN": 19662, + "TP": 5499, + "n_pred": 5603, + "n_ref": 5834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9163197335553706, + "FN": 60, + "FP": 744, + "IoU": 0.8455628121398386, + "TN": 20394, + "TP": 4402, + "n_pred": 5146, + "n_ref": 4462 + }, + "2": { + "Dice": 0.9242594075260209, + "FN": 314, + "FP": 159, + "IoU": 0.8591842810360226, + "TN": 22241, + "TP": 2886, + "n_pred": 3045, + "n_ref": 3200 + }, + "3": { + "Dice": 0.9534883720930233, + "FN": 40, + "FP": 140, + "IoU": 0.9111111111111111, + "TN": 23575, + "TP": 1845, + "n_pred": 1985, + "n_ref": 1885 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9071794871794872, + "FN": 291, + "FP": 71, + "IoU": 0.8301267010793055, + "TN": 4269, + "TP": 1769, + "n_pred": 1840, + "n_ref": 2060 + }, + "2": { + "Dice": 0.8893647394718058, + "FN": 46, + "FP": 109, + "IoU": 0.800771208226221, + "TN": 5622, + "TP": 623, + "n_pred": 732, + "n_ref": 669 + }, + "3": { + "Dice": 0.7711301044634378, + "FN": 2, + "FP": 239, + "IoU": 0.6275115919629057, + "TN": 5753, + "TP": 406, + "n_pred": 645, + "n_ref": 408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.8929115656784204, + "FN": 302.58620689655174, + "FP": 206.6206896551724, + "IoU": 0.8227452911608256, + "TN": 16224.770114942528, + "TP": 2686.7126436781605, + "n_pred": 2893.3333333333335, + "n_ref": 2989.2988505747126 + }, + "mean": { + "1": { + "Dice": 0.8390944907558594, + "FN": 512.7241379310345, + "FP": 204.82758620689654, + "IoU": 0.7520687879124383, + "TN": 16102.655172413793, + "TP": 2600.4827586206898, + "n_pred": 2805.310344827586, + "n_ref": 3113.206896551724 + }, + "2": { + "Dice": 0.9090194038756668, + "FN": 230.93103448275863, + "FP": 283.58620689655174, + "IoU": 0.8352685273532016, + "TN": 16387.58620689655, + "TP": 2518.5862068965516, + "n_pred": 2802.1724137931033, + "n_ref": 2749.5172413793102 + }, + "3": { + "Dice": 0.9306208024037351, + "FN": 164.10344827586206, + "FP": 131.44827586206895, + "IoU": 0.880898558216837, + "TN": 16184.068965517241, + "TP": 2941.0689655172414, + "n_pred": 3072.5172413793102, + "n_ref": 3105.1724137931033 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.683037744429286, + "FN": 79, + "FP": 618, + "IoU": 0.518646408839779, + "TN": 17752, + "TP": 751, + "n_pred": 1369, + "n_ref": 830 + }, + "2": { + "Dice": 0.8584748584748585, + "FN": 424, + "FP": 426, + "IoU": 0.7520420070011669, + "TN": 15772, + "TP": 2578, + "n_pred": 3004, + "n_ref": 3002 + }, + "3": { + "Dice": 0.9464600902137674, + "FN": 404, + "FP": 142, + "IoU": 0.8983618763961281, + "TN": 13828, + "TP": 4826, + "n_pred": 4968, + "n_ref": 5230 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9703983432817639, + "FN": 235, + "FP": 8, + "IoU": 0.9424988168480833, + "TN": 27774, + "TP": 3983, + "n_pred": 3991, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8918558077436582, + "FN": 216, + "FP": 432, + "IoU": 0.8048192771084337, + "TN": 28680, + "TP": 2672, + "n_pred": 3104, + "n_ref": 2888 + }, + "3": { + "Dice": 0.9697182480470464, + "FN": 256, + "FP": 89, + "IoU": 0.9412165615948203, + "TN": 26131, + "TP": 5524, + "n_pred": 5613, + "n_ref": 5780 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9423168600031782, + "FN": 149, + "FP": 214, + "IoU": 0.8909254807692307, + "TN": 35072, + "TP": 2965, + "n_pred": 3179, + "n_ref": 3114 + }, + "2": { + "Dice": 0.8895711800225156, + "FN": 572, + "FP": 507, + "IoU": 0.8011059907834102, + "TN": 32975, + "TP": 4346, + "n_pred": 4853, + "n_ref": 4918 + }, + "3": { + "Dice": 0.9647234071365698, + "FN": 194, + "FP": 327, + "IoU": 0.9318508829300196, + "TN": 30755, + "TP": 7124, + "n_pred": 7451, + "n_ref": 7318 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9370629370629371, + "FN": 202, + "FP": 302, + "IoU": 0.881578947368421, + "TN": 21344, + "TP": 3752, + "n_pred": 4054, + "n_ref": 3954 + }, + "2": { + "Dice": 0.9290989660265879, + "FN": 509, + "FP": 355, + "IoU": 0.8675862068965517, + "TN": 19075, + "TP": 5661, + "n_pred": 6016, + "n_ref": 6170 + }, + "3": { + "Dice": 0.9800622528812989, + "FN": 81, + "FP": 156, + "IoU": 0.9609039920818212, + "TN": 19538, + "TP": 5825, + "n_pred": 5981, + "n_ref": 5906 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7456333480111551, + "FN": 3348, + "FP": 118, + "IoU": 0.5944301427568454, + "TN": 36254, + "TP": 5080, + "n_pred": 5198, + "n_ref": 8428 + }, + "2": { + "Dice": 0.8899729941632546, + "FN": 414, + "FP": 849, + "IoU": 0.8017579657824517, + "TN": 38429, + "TP": 5108, + "n_pred": 5957, + "n_ref": 5522 + }, + "3": { + "Dice": 0.975327215285091, + "FN": 502, + "FP": 154, + "IoU": 0.9518426075466158, + "TN": 31178, + "TP": 12966, + "n_pred": 13120, + "n_ref": 13468 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9276120704692133, + "FN": 357, + "FP": 58, + "IoU": 0.8649967469095641, + "TN": 16126, + "TP": 2659, + "n_pred": 2717, + "n_ref": 3016 + }, + "2": { + "Dice": 0.9161121673003803, + "FN": 277, + "FP": 429, + "IoU": 0.8452093839070379, + "TN": 14639, + "TP": 3855, + "n_pred": 4284, + "n_ref": 4132 + }, + "3": { + "Dice": 0.9634566766260629, + "FN": 224, + "FP": 94, + "IoU": 0.929490022172949, + "TN": 14690, + "TP": 4192, + "n_pred": 4286, + "n_ref": 4416 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2633148700468683, + "FN": 201, + "FP": 1528, + "IoU": 0.15161923454367027, + "TN": 10762, + "TP": 309, + "n_pred": 1837, + "n_ref": 510 + }, + "2": { + "Dice": 0.9066059225512528, + "FN": 154, + "FP": 584, + "IoU": 0.8291666666666667, + "TN": 8480, + "TP": 3582, + "n_pred": 4166, + "n_ref": 3736 + }, + "3": { + "Dice": 0.9446682213271147, + "FN": 144, + "FP": 117, + "IoU": 0.8951386098834874, + "TN": 10311, + "TP": 2228, + "n_pred": 2345, + "n_ref": 2372 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9601111883252259, + "FN": 190, + "FP": 97, + "IoU": 0.9232825447741245, + "TN": 9059, + "TP": 3454, + "n_pred": 3551, + "n_ref": 3644 + }, + "2": { + "Dice": 0.9274733937721719, + "FN": 147, + "FP": 221, + "IoU": 0.8647556045571481, + "TN": 10079, + "TP": 2353, + "n_pred": 2574, + "n_ref": 2500 + }, + "3": { + "Dice": 0.9029635901778154, + "FN": 134, + "FP": 439, + "IoU": 0.8230935473911701, + "TN": 9561, + "TP": 2666, + "n_pred": 3105, + "n_ref": 2800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4444444444444444, + "FN": 0, + "FP": 170, + "IoU": 0.2857142857142857, + "TN": 25362, + "TP": 68, + "n_pred": 238, + "n_ref": 68 + }, + "2": { + "Dice": 0.9330884282340594, + "FN": 436, + "FP": 74, + "IoU": 0.8745696015740285, + "TN": 21534, + "TP": 3556, + "n_pred": 3630, + "n_ref": 3992 + }, + "3": { + "Dice": 0.484149855907781, + "FN": 46, + "FP": 312, + "IoU": 0.3193916349809886, + "TN": 25074, + "TP": 168, + "n_pred": 480, + "n_ref": 214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.826003003647286, + "FN": 787, + "FP": 24, + "IoU": 0.7035818713450293, + "TN": 3664, + "TP": 1925, + "n_pred": 1949, + "n_ref": 2712 + }, + "2": { + "Dice": 0.9412884798476674, + "FN": 67, + "FP": 118, + "IoU": 0.8890887290167866, + "TN": 4732, + "TP": 1483, + "n_pred": 1601, + "n_ref": 1550 + }, + "3": { + "Dice": 0.9821736630247269, + "FN": 40, + "FP": 22, + "IoU": 0.9649717514124294, + "TN": 4630, + "TP": 1708, + "n_pred": 1730, + "n_ref": 1748 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8078231292517006, + "FN": 394, + "FP": 58, + "IoU": 0.6776034236804565, + "TN": 36998, + "TP": 950, + "n_pred": 1008, + "n_ref": 1344 + }, + "2": { + "Dice": 0.9381443298969072, + "FN": 52, + "FP": 260, + "IoU": 0.883495145631068, + "TN": 35722, + "TP": 2366, + "n_pred": 2626, + "n_ref": 2418 + }, + "3": { + "Dice": 0.9470304975922953, + "FN": 58, + "FP": 8, + "IoU": 0.899390243902439, + "TN": 37744, + "TP": 590, + "n_pred": 598, + "n_ref": 648 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9831181727904668, + "FN": 18, + "FP": 118, + "IoU": 0.966796875, + "TN": 21504, + "TP": 3960, + "n_pred": 4078, + "n_ref": 3978 + }, + "2": { + "Dice": 0.9546279491833031, + "FN": 36, + "FP": 64, + "IoU": 0.9131944444444444, + "TN": 24448, + "TP": 1052, + "n_pred": 1116, + "n_ref": 1088 + }, + "3": { + "Dice": 0.9551656920077972, + "FN": 46, + "FP": 0, + "IoU": 0.914179104477612, + "TN": 25064, + "TP": 490, + "n_pred": 490, + "n_ref": 536 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.934056987788331, + "FN": 159, + "FP": 84, + "IoU": 0.8762729124236253, + "TN": 23636, + "TP": 1721, + "n_pred": 1805, + "n_ref": 1880 + }, + "2": { + "Dice": 0.9446199199831543, + "FN": 270, + "FP": 256, + "IoU": 0.8950518754988028, + "TN": 20588, + "TP": 4486, + "n_pred": 4742, + "n_ref": 4756 + }, + "3": { + "Dice": 0.9482357912529051, + "FN": 188, + "FP": 57, + "IoU": 0.9015668943350743, + "TN": 23111, + "TP": 2244, + "n_pred": 2301, + "n_ref": 2432 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6952238166630971, + "FN": 1315, + "FP": 108, + "IoU": 0.5328299409061064, + "TN": 16154, + "TP": 1623, + "n_pred": 1731, + "n_ref": 2938 + }, + "2": { + "Dice": 0.9240612544577302, + "FN": 337, + "FP": 387, + "IoU": 0.8588418795086762, + "TN": 14071, + "TP": 4405, + "n_pred": 4792, + "n_ref": 4742 + }, + "3": { + "Dice": 0.9486132014620512, + "FN": 192, + "FP": 47, + "IoU": 0.9022494887525563, + "TN": 16755, + "TP": 2206, + "n_pred": 2253, + "n_ref": 2398 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8725936296814841, + "FN": 159, + "FP": 569, + "IoU": 0.7739832350201801, + "TN": 9579, + "TP": 2493, + "n_pred": 3062, + "n_ref": 2652 + }, + "2": { + "Dice": 0.8869767441860466, + "FN": 355, + "FP": 131, + "IoU": 0.7969076473046385, + "TN": 10407, + "TP": 1907, + "n_pred": 2038, + "n_ref": 2262 + }, + "3": { + "Dice": 0.9602446483180428, + "FN": 103, + "FP": 118, + "IoU": 0.9235294117647059, + "TN": 9910, + "TP": 2669, + "n_pred": 2787, + "n_ref": 2772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7984771573604061, + "FN": 77, + "FP": 717, + "IoU": 0.6645542881284326, + "TN": 16833, + "TP": 1573, + "n_pred": 2290, + "n_ref": 1650 + }, + "2": { + "Dice": 0.8960464822533788, + "FN": 557, + "FP": 266, + "IoU": 0.8116704805491991, + "TN": 14830, + "TP": 3547, + "n_pred": 3813, + "n_ref": 4104 + }, + "3": { + "Dice": 0.915004492362983, + "FN": 76, + "FP": 397, + "IoU": 0.8433256045048029, + "TN": 16181, + "TP": 2546, + "n_pred": 2943, + "n_ref": 2622 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.59453125, + "FN": 2062, + "FP": 14, + "IoU": 0.42301278488048916, + "TN": 9202, + "TP": 1522, + "n_pred": 1536, + "n_ref": 3584 + }, + "2": { + "Dice": 0.8375652173913043, + "FN": 87, + "FP": 380, + "IoU": 0.720526630760024, + "TN": 11129, + "TP": 1204, + "n_pred": 1584, + "n_ref": 1291 + }, + "3": { + "Dice": 0.9482592806308906, + "FN": 244, + "FP": 25, + "IoU": 0.901609363569861, + "TN": 10066, + "TP": 2465, + "n_pred": 2490, + "n_ref": 2709 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9330727894479727, + "FN": 71, + "FP": 66, + "IoU": 0.8745421245421245, + "TN": 5308, + "TP": 955, + "n_pred": 1021, + "n_ref": 1026 + }, + "2": { + "Dice": 0.8870967741935484, + "FN": 165, + "FP": 17, + "IoU": 0.7971014492753623, + "TN": 5503, + "TP": 715, + "n_pred": 732, + "n_ref": 880 + }, + "3": { + "Dice": 0.9628783552255854, + "FN": 9, + "FP": 56, + "IoU": 0.9284140969162996, + "TN": 5492, + "TP": 843, + "n_pred": 899, + "n_ref": 852 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8630490956072352, + "FN": 521, + "FP": 62, + "IoU": 0.759090909090909, + "TN": 10380, + "TP": 1837, + "n_pred": 1899, + "n_ref": 2358 + }, + "2": { + "Dice": 0.9098238913643115, + "FN": 104, + "FP": 321, + "IoU": 0.834565978980148, + "TN": 10231, + "TP": 2144, + "n_pred": 2465, + "n_ref": 2248 + }, + "3": { + "Dice": 0.9745920745920746, + "FN": 157, + "FP": 61, + "IoU": 0.9504432825642192, + "TN": 8401, + "TP": 4181, + "n_pred": 4242, + "n_ref": 4338 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9828351012536162, + "FN": 64, + "FP": 25, + "IoU": 0.9662495259764884, + "TN": 3763, + "TP": 2548, + "n_pred": 2573, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9530386740331491, + "FN": 29, + "FP": 73, + "IoU": 0.9102902374670184, + "TN": 5263, + "TP": 1035, + "n_pred": 1108, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9904397705544933, + "FN": 12, + "FP": 18, + "IoU": 0.9810606060606061, + "TN": 4816, + "TP": 1554, + "n_pred": 1572, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9029671210906175, + "FN": 36, + "FP": 206, + "IoU": 0.8230994152046783, + "TN": 11432, + "TP": 1126, + "n_pred": 1332, + "n_ref": 1162 + }, + "2": { + "Dice": 0.9134020618556701, + "FN": 177, + "FP": 411, + "IoU": 0.8406072106261859, + "TN": 9111, + "TP": 3101, + "n_pred": 3512, + "n_ref": 3278 + }, + "3": { + "Dice": 0.9705270077791169, + "FN": 221, + "FP": 48, + "IoU": 0.9427415921668795, + "TN": 8102, + "TP": 4429, + "n_pred": 4477, + "n_ref": 4650 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.902899217671422, + "FN": 137, + "FP": 74, + "IoU": 0.822986577181208, + "TN": 11608, + "TP": 981, + "n_pred": 1055, + "n_ref": 1118 + }, + "3": { + "Dice": 0.887305122494432, + "FN": 42, + "FP": 211, + "IoU": 0.7974379503602882, + "TN": 11551, + "TP": 996, + "n_pred": 1207, + "n_ref": 1038 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8987696956615584, + "FN": 378, + "FP": 91, + "IoU": 0.8161505292042336, + "TN": 3849, + "TP": 2082, + "n_pred": 2173, + "n_ref": 2460 + }, + "2": { + "Dice": 0.9525634882606613, + "FN": 43, + "FP": 56, + "IoU": 0.909423604757548, + "TN": 5307, + "TP": 994, + "n_pred": 1050, + "n_ref": 1037 + }, + "3": { + "Dice": 0.9748873148744366, + "FN": 30, + "FP": 9, + "IoU": 0.9510050251256281, + "TN": 5604, + "TP": 757, + "n_pred": 766, + "n_ref": 787 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient075_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient075_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8298984034833091, + "FN": 2282, + "FP": 62, + "IoU": 0.709253287025552, + "TN": 4738, + "TP": 5718, + "n_pred": 5780, + "n_ref": 8000 + }, + "2": { + "Dice": 0.9226690234202386, + "FN": 114, + "FP": 61, + "IoU": 0.8564397046759639, + "TN": 11581, + "TP": 1044, + "n_pred": 1105, + "n_ref": 1158 + }, + "3": { + "Dice": 0.9374379344587885, + "FN": 12, + "FP": 51, + "IoU": 0.8822429906542056, + "TN": 12265, + "TP": 472, + "n_pred": 523, + "n_ref": 484 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9189022510021585, + "FN": 38, + "FP": 225, + "IoU": 0.849971477467199, + "TN": 11047, + "TP": 1490, + "n_pred": 1715, + "n_ref": 1528 + }, + "2": { + "Dice": 0.9497663551401869, + "FN": 5, + "FP": 81, + "IoU": 0.9043381535038932, + "TN": 11901, + "TP": 813, + "n_pred": 894, + "n_ref": 818 + }, + "3": { + "Dice": 0.9682539682539683, + "FN": 35, + "FP": 1, + "IoU": 0.9384615384615385, + "TN": 12215, + "TP": 549, + "n_pred": 550, + "n_ref": 584 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9714801715704718, + "FN": 230, + "FP": 149, + "IoU": 0.9445419959028387, + "TN": 5966, + "TP": 6455, + "n_pred": 6604, + "n_ref": 6685 + }, + "2": { + "Dice": 0.9348171701112877, + "FN": 142, + "FP": 104, + "IoU": 0.8776119402985074, + "TN": 10790, + "TP": 1764, + "n_pred": 1868, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9825627899536075, + "FN": 67, + "FP": 42, + "IoU": 0.9657232704402515, + "TN": 9620, + "TP": 3071, + "n_pred": 3113, + "n_ref": 3138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9741263940520446, + "FN": 193, + "FP": 155, + "IoU": 0.9495579069430352, + "TN": 25101, + "TP": 6551, + "n_pred": 6706, + "n_ref": 6744 + }, + "2": { + "Dice": 0.9110671936758893, + "FN": 159, + "FP": 111, + "IoU": 0.8366606170598911, + "TN": 30347, + "TP": 1383, + "n_pred": 1494, + "n_ref": 1542 + }, + "3": { + "Dice": 0.8657844990548205, + "FN": 21, + "FP": 50, + "IoU": 0.7633333333333333, + "TN": 31700, + "TP": 229, + "n_pred": 279, + "n_ref": 250 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9124518613607189, + "FN": 664, + "FP": 18, + "IoU": 0.8389990557129368, + "TN": 14964, + "TP": 3554, + "n_pred": 3572, + "n_ref": 4218 + }, + "2": { + "Dice": 0.7809403331224963, + "FN": 273, + "FP": 766, + "IoU": 0.6406087858872362, + "TN": 16309, + "TP": 1852, + "n_pred": 2618, + "n_ref": 2125 + }, + "3": { + "Dice": 0.8153443766346992, + "FN": 477, + "FP": 582, + "IoU": 0.6882543420665292, + "TN": 15803, + "TP": 2338, + "n_pred": 2920, + "n_ref": 2815 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9213339033775118, + "FN": 660, + "FP": 76, + "IoU": 0.8541418945699564, + "TN": 20554, + "TP": 4310, + "n_pred": 4386, + "n_ref": 4970 + }, + "2": { + "Dice": 0.8778944340572414, + "FN": 439, + "FP": 410, + "IoU": 0.7823634965393489, + "TN": 21699, + "TP": 3052, + "n_pred": 3462, + "n_ref": 3491 + }, + "3": { + "Dice": 0.9217332315780548, + "FN": 744, + "FP": 179, + "IoU": 0.8548285624410192, + "TN": 19242, + "TP": 5435, + "n_pred": 5614, + "n_ref": 6179 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.9039379253222202, + "FN": 216.91111111111113, + "FP": 248.20000000000002, + "IoU": 0.8341700967576035, + "TN": 15226.655555555555, + "TP": 2441.566666666666, + "n_pred": 2689.7666666666664, + "n_ref": 2658.4777777777776 + }, + "mean": { + "1": { + "Dice": 0.8635923289554978, + "FN": 301.5, + "FP": 446.26666666666665, + "IoU": 0.7781961040561833, + "TN": 14232.466666666667, + "TP": 3153.1, + "n_pred": 3599.366666666667, + "n_ref": 3454.6 + }, + "2": { + "Dice": 0.9001277873674224, + "FN": 211.63333333333333, + "FP": 238.26666666666668, + "IoU": 0.8201698116276043, + "TN": 15672.0, + "TP": 2011.4333333333334, + "n_pred": 2249.7, + "n_ref": 2223.0666666666666 + }, + "3": { + "Dice": 0.9480936596437404, + "FN": 137.6, + "FP": 60.06666666666667, + "IoU": 0.9041443745890223, + "TN": 15775.5, + "TP": 2160.1666666666665, + "n_pred": 2220.233333333333, + "n_ref": 2297.766666666667 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.897914379802415, + "FN": 328, + "FP": 44, + "IoU": 0.8147410358565738, + "TN": 17192, + "TP": 1636, + "n_pred": 1680, + "n_ref": 1964 + }, + "2": { + "Dice": 0.9178107955614068, + "FN": 232, + "FP": 205, + "IoU": 0.8481056656239138, + "TN": 16323, + "TP": 2440, + "n_pred": 2645, + "n_ref": 2672 + }, + "3": { + "Dice": 0.955514705882353, + "FN": 189, + "FP": 53, + "IoU": 0.9148187258007744, + "TN": 16359, + "TP": 2599, + "n_pred": 2652, + "n_ref": 2788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9177142857142857, + "FN": 271, + "FP": 161, + "IoU": 0.8479408658922915, + "TN": 9959, + "TP": 2409, + "n_pred": 2570, + "n_ref": 2680 + }, + "2": { + "Dice": 0.8816163915765509, + "FN": 137, + "FP": 279, + "IoU": 0.788295165394402, + "TN": 10835, + "TP": 1549, + "n_pred": 1828, + "n_ref": 1686 + }, + "3": { + "Dice": 0.9626394953905871, + "FN": 130, + "FP": 24, + "IoU": 0.9279700654817586, + "TN": 10662, + "TP": 1984, + "n_pred": 2008, + "n_ref": 2114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8579059829059829, + "FN": 109, + "FP": 689, + "IoU": 0.7511693171188026, + "TN": 28793, + "TP": 2409, + "n_pred": 3098, + "n_ref": 2518 + }, + "2": { + "Dice": 0.8689825427614177, + "FN": 212, + "FP": 531, + "IoU": 0.7683193015279077, + "TN": 28793, + "TP": 2464, + "n_pred": 2995, + "n_ref": 2676 + }, + "3": { + "Dice": 0.9664368512766118, + "FN": 328, + "FP": 115, + "IoU": 0.9350535112153643, + "TN": 25179, + "TP": 6378, + "n_pred": 6493, + "n_ref": 6706 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9541125541125541, + "FN": 49, + "FP": 110, + "IoU": 0.9122516556291391, + "TN": 4588, + "TP": 1653, + "n_pred": 1763, + "n_ref": 1702 + }, + "2": { + "Dice": 0.9079659706109822, + "FN": 41, + "FP": 78, + "IoU": 0.8314447592067988, + "TN": 5694, + "TP": 587, + "n_pred": 665, + "n_ref": 628 + }, + "3": { + "Dice": 0.9788494077834179, + "FN": 13, + "FP": 37, + "IoU": 0.9585749792874897, + "TN": 5193, + "TP": 1157, + "n_pred": 1194, + "n_ref": 1170 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7579734873342958, + "FN": 83, + "FP": 3605, + "IoU": 0.6102715840642502, + "TN": 28937, + "TP": 5775, + "n_pred": 9380, + "n_ref": 5858 + }, + "2": { + "Dice": 0.9068757283610552, + "FN": 310, + "FP": 569, + "IoU": 0.8296181430509789, + "TN": 33241, + "TP": 4280, + "n_pred": 4849, + "n_ref": 4590 + }, + "3": { + "Dice": 0.9685120782028386, + "FN": 218, + "FP": 117, + "IoU": 0.938946601057044, + "TN": 32913, + "TP": 5152, + "n_pred": 5269, + "n_ref": 5370 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9913501316284318, + "FN": 44, + "FP": 25, + "IoU": 0.9828486204325131, + "TN": 8777, + "TP": 3954, + "n_pred": 3979, + "n_ref": 3998 + }, + "2": { + "Dice": 0.9266943291839558, + "FN": 38, + "FP": 68, + "IoU": 0.8634020618556701, + "TN": 12024, + "TP": 670, + "n_pred": 738, + "n_ref": 708 + }, + "3": { + "Dice": 0.9883408071748879, + "FN": 23, + "FP": 16, + "IoU": 0.9769503546099291, + "TN": 11108, + "TP": 1653, + "n_pred": 1669, + "n_ref": 1676 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7854435178165277, + "FN": 1122, + "FP": 10, + "IoU": 0.6466916354556804, + "TN": 9596, + "TP": 2072, + "n_pred": 2082, + "n_ref": 3194 + }, + "2": { + "Dice": 0.9609856262833676, + "FN": 42, + "FP": 34, + "IoU": 0.924901185770751, + "TN": 11788, + "TP": 936, + "n_pred": 970, + "n_ref": 978 + }, + "3": { + "Dice": 0.9856164383561644, + "FN": 9, + "FP": 33, + "IoU": 0.9716407832545577, + "TN": 11319, + "TP": 1439, + "n_pred": 1472, + "n_ref": 1448 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6666666666666666, + "FN": 0, + "FP": 2, + "IoU": 0.5, + "TN": 25596, + "TP": 2, + "n_pred": 4, + "n_ref": 2 + }, + "2": { + "Dice": 0.9228523769808173, + "FN": 109, + "FP": 261, + "IoU": 0.856755710414247, + "TN": 23017, + "TP": 2213, + "n_pred": 2474, + "n_ref": 2322 + }, + "3": { + "Dice": 0.9710486216927552, + "FN": 169, + "FP": 40, + "IoU": 0.9437264404954228, + "TN": 21886, + "TP": 3505, + "n_pred": 3545, + "n_ref": 3674 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.917157712305026, + "FN": 197, + "FP": 42, + "IoU": 0.8469910371318822, + "TN": 11238, + "TP": 1323, + "n_pred": 1365, + "n_ref": 1520 + }, + "2": { + "Dice": 0.9397828232971372, + "FN": 276, + "FP": 212, + "IoU": 0.8864059590316573, + "TN": 8504, + "TP": 3808, + "n_pred": 4020, + "n_ref": 4084 + }, + "3": { + "Dice": 0.9194499017681729, + "FN": 78, + "FP": 127, + "IoU": 0.850909090909091, + "TN": 11425, + "TP": 1170, + "n_pred": 1297, + "n_ref": 1248 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8219961856325493, + "FN": 188, + "FP": 372, + "IoU": 0.6977873718294657, + "TN": 30147, + "TP": 1293, + "n_pred": 1665, + "n_ref": 1481 + }, + "2": { + "Dice": 0.923138510808647, + "FN": 169, + "FP": 599, + "IoU": 0.8572490706319703, + "TN": 26620, + "TP": 4612, + "n_pred": 5211, + "n_ref": 4781 + }, + "3": { + "Dice": 0.759020618556701, + "FN": 339, + "FP": 35, + "IoU": 0.6116303219106958, + "TN": 31037, + "TP": 589, + "n_pred": 624, + "n_ref": 928 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6054216867469879, + "FN": 498, + "FP": 26, + "IoU": 0.43412526997840173, + "TN": 31074, + "TP": 402, + "n_pred": 428, + "n_ref": 900 + }, + "2": { + "Dice": 0.8745893946503989, + "FN": 1807, + "FP": 331, + "IoU": 0.7771291566767434, + "TN": 22407, + "TP": 7455, + "n_pred": 7786, + "n_ref": 9262 + }, + "3": { + "Dice": 0.9415305245055889, + "FN": 219, + "FP": 189, + "IoU": 0.8895207148659626, + "TN": 28307, + "TP": 3285, + "n_pred": 3474, + "n_ref": 3504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5496662740478995, + "FN": 24, + "FP": 1123, + "IoU": 0.3789929615592853, + "TN": 10953, + "TP": 700, + "n_pred": 1823, + "n_ref": 724 + }, + "2": { + "Dice": 0.8870234347674012, + "FN": 204, + "FP": 119, + "IoU": 0.7969830295411691, + "TN": 11209, + "TP": 1268, + "n_pred": 1387, + "n_ref": 1472 + }, + "3": { + "Dice": 0.9604889762060685, + "FN": 38, + "FP": 143, + "IoU": 0.9239815203695926, + "TN": 10419, + "TP": 2200, + "n_pred": 2343, + "n_ref": 2238 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.672246926497515, + "FN": 2448, + "FP": 58, + "IoU": 0.5063041765169425, + "TN": 20524, + "TP": 2570, + "n_pred": 2628, + "n_ref": 5018 + }, + "2": { + "Dice": 0.8906724511930586, + "FN": 155, + "FP": 349, + "IoU": 0.8028940164254986, + "TN": 23043, + "TP": 2053, + "n_pred": 2402, + "n_ref": 2208 + }, + "3": { + "Dice": 0.9758743754461099, + "FN": 138, + "FP": 31, + "IoU": 0.9528854195706719, + "TN": 22013, + "TP": 3418, + "n_pred": 3449, + "n_ref": 3556 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7566820276497696, + "FN": 52, + "FP": 1004, + "IoU": 0.6085989621942179, + "TN": 10102, + "TP": 1642, + "n_pred": 2646, + "n_ref": 1694 + }, + "2": { + "Dice": 0.9074446680080482, + "FN": 88, + "FP": 96, + "IoU": 0.8305709023941068, + "TN": 11714, + "TP": 902, + "n_pred": 998, + "n_ref": 990 + }, + "3": { + "Dice": 0.96044825313118, + "FN": 71, + "FP": 49, + "IoU": 0.9239061509194674, + "TN": 11223, + "TP": 1457, + "n_pred": 1506, + "n_ref": 1528 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9799474484856866, + "FN": 93, + "FP": 52, + "IoU": 0.9606832971800434, + "TN": 9112, + "TP": 3543, + "n_pred": 3595, + "n_ref": 3636 + }, + "2": { + "Dice": 0.9245541838134431, + "FN": 49, + "FP": 116, + "IoU": 0.8596938775510204, + "TN": 11624, + "TP": 1011, + "n_pred": 1127, + "n_ref": 1060 + }, + "3": { + "Dice": 0.9503311258278145, + "FN": 83, + "FP": 7, + "IoU": 0.9053627760252366, + "TN": 11849, + "TP": 861, + "n_pred": 868, + "n_ref": 944 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.978968412634946, + "FN": 181, + "FP": 82, + "IoU": 0.9588032581453634, + "TN": 12816, + "TP": 6121, + "n_pred": 6203, + "n_ref": 6302 + }, + "2": { + "Dice": 0.8939759036144578, + "FN": 145, + "FP": 207, + "IoU": 0.8082788671023965, + "TN": 17364, + "TP": 1484, + "n_pred": 1691, + "n_ref": 1629 + }, + "3": { + "Dice": 0.9665246500304321, + "FN": 88, + "FP": 77, + "IoU": 0.9352179034157833, + "TN": 16653, + "TP": 2382, + "n_pred": 2459, + "n_ref": 2470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7691277735271614, + "FN": 197, + "FP": 2217, + "IoU": 0.6248640248640248, + "TN": 6365, + "TP": 4021, + "n_pred": 6238, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8736263736263736, + "FN": 125, + "FP": 151, + "IoU": 0.775609756097561, + "TN": 11570, + "TP": 954, + "n_pred": 1105, + "n_ref": 1079 + }, + "3": { + "Dice": 0.9213483146067416, + "FN": 113, + "FP": 13, + "IoU": 0.8541666666666666, + "TN": 11936, + "TP": 738, + "n_pred": 751, + "n_ref": 851 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9542437383839277, + "FN": 329, + "FP": 188, + "IoU": 0.9124915368991199, + "TN": 13292, + "TP": 5391, + "n_pred": 5579, + "n_ref": 5720 + }, + "2": { + "Dice": 0.8910158799216881, + "FN": 264, + "FP": 237, + "IoU": 0.803452334248725, + "TN": 16651, + "TP": 2048, + "n_pred": 2285, + "n_ref": 2312 + }, + "3": { + "Dice": 0.953203743700504, + "FN": 128, + "FP": 132, + "IoU": 0.9105914718019257, + "TN": 16292, + "TP": 2648, + "n_pred": 2780, + "n_ref": 2776 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9488336373236056, + "FN": 495, + "FP": 38, + "IoU": 0.902648401826484, + "TN": 7325, + "TP": 4942, + "n_pred": 4980, + "n_ref": 5437 + }, + "2": { + "Dice": 0.9536973047684866, + "FN": 68, + "FP": 66, + "IoU": 0.9114927344782034, + "TN": 11286, + "TP": 1380, + "n_pred": 1446, + "n_ref": 1448 + }, + "3": { + "Dice": 0.9855793137742417, + "FN": 31, + "FP": 27, + "IoU": 0.9715686274509804, + "TN": 10760, + "TP": 1982, + "n_pred": 2009, + "n_ref": 2013 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9375459221160911, + "FN": 82, + "FP": 3, + "IoU": 0.8824343015214384, + "TN": 12077, + "TP": 638, + "n_pred": 641, + "n_ref": 720 + }, + "2": { + "Dice": 0.9511477339611536, + "FN": 76, + "FP": 173, + "IoU": 0.9068462401795735, + "TN": 10127, + "TP": 2424, + "n_pred": 2597, + "n_ref": 2500 + }, + "3": { + "Dice": 0.9735015772870662, + "FN": 69, + "FP": 15, + "IoU": 0.9483712354025814, + "TN": 11173, + "TP": 1543, + "n_pred": 1558, + "n_ref": 1612 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8023199613339778, + "FN": 58, + "FP": 351, + "IoU": 0.6698950766747377, + "TN": 11561, + "TP": 830, + "n_pred": 1181, + "n_ref": 888 + }, + "2": { + "Dice": 0.8810983084089238, + "FN": 109, + "FP": 376, + "IoU": 0.7874671340929009, + "TN": 10518, + "TP": 1797, + "n_pred": 2173, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9647617308745664, + "FN": 164, + "FP": 29, + "IoU": 0.9319223985890652, + "TN": 9965, + "TP": 2642, + "n_pred": 2671, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8419572137093789, + "FN": 295, + "FP": 1840, + "IoU": 0.7270519048836614, + "TN": 11378, + "TP": 5687, + "n_pred": 7527, + "n_ref": 5982 + }, + "2": { + "Dice": 0.8571428571428571, + "FN": 260, + "FP": 204, + "IoU": 0.75, + "TN": 17344, + "TP": 1392, + "n_pred": 1596, + "n_ref": 1652 + }, + "3": { + "Dice": 0.9252958579881657, + "FN": 187, + "FP": 15, + "IoU": 0.860977288368892, + "TN": 17747, + "TP": 1251, + "n_pred": 1266, + "n_ref": 1438 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9526914075560013, + "FN": 265, + "FP": 301, + "IoU": 0.909656823623304, + "TN": 12935, + "TP": 5699, + "n_pred": 6000, + "n_ref": 5964 + }, + "2": { + "Dice": 0.7788032152426317, + "FN": 298, + "FP": 445, + "IoU": 0.6377376889322282, + "TN": 17149, + "TP": 1308, + "n_pred": 1753, + "n_ref": 1606 + }, + "3": { + "Dice": 0.9604355716878403, + "FN": 213, + "FP": 114, + "IoU": 0.9238826815642458, + "TN": 14904, + "TP": 3969, + "n_pred": 4083, + "n_ref": 4182 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9749386610585349, + "FN": 133, + "FP": 153, + "IoU": 0.9511027526072833, + "TN": 13351, + "TP": 5563, + "n_pred": 5716, + "n_ref": 5696 + }, + "2": { + "Dice": 0.8927752293577982, + "FN": 118, + "FP": 256, + "IoU": 0.8063179699637494, + "TN": 17269, + "TP": 1557, + "n_pred": 1813, + "n_ref": 1675 + }, + "3": { + "Dice": 0.9702615549982085, + "FN": 154, + "FP": 12, + "IoU": 0.942240779401531, + "TN": 16326, + "TP": 2708, + "n_pred": 2720, + "n_ref": 2862 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9712079241165114, + "FN": 282, + "FP": 61, + "IoU": 0.9440274151436031, + "TN": 6672, + "TP": 5785, + "n_pred": 5846, + "n_ref": 6067 + }, + "2": { + "Dice": 0.8911111111111111, + "FN": 20, + "FP": 176, + "IoU": 0.8036072144288577, + "TN": 11802, + "TP": 802, + "n_pred": 978, + "n_ref": 822 + }, + "3": { + "Dice": 0.928, + "FN": 72, + "FP": 0, + "IoU": 0.8656716417910447, + "TN": 12264, + "TP": 464, + "n_pred": 464, + "n_ref": 536 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9144803229061554, + "FN": 467, + "FP": 211, + "IoU": 0.8424355101092261, + "TN": 8497, + "TP": 3625, + "n_pred": 3836, + "n_ref": 4092 + }, + "2": { + "Dice": 0.8712051517939282, + "FN": 243, + "FP": 317, + "IoU": 0.771801140994295, + "TN": 10346, + "TP": 1894, + "n_pred": 2211, + "n_ref": 2137 + }, + "3": { + "Dice": 0.9107142857142857, + "FN": 62, + "FP": 178, + "IoU": 0.8360655737704918, + "TN": 11336, + "TP": 1224, + "n_pred": 1402, + "n_ref": 1286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9577779849007363, + "FN": 203, + "FP": 250, + "IoU": 0.9189769272044357, + "TN": 13609, + "TP": 5138, + "n_pred": 5388, + "n_ref": 5341 + }, + "2": { + "Dice": 0.8999811640610285, + "FN": 270, + "FP": 261, + "IoU": 0.8181506849315069, + "TN": 16280, + "TP": 2389, + "n_pred": 2650, + "n_ref": 2659 + }, + "3": { + "Dice": 0.8990757855822551, + "FN": 479, + "FP": 67, + "IoU": 0.816655473472129, + "TN": 16222, + "TP": 2432, + "n_pred": 2499, + "n_ref": 2911 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9516019086571234, + "FN": 56, + "FP": 228, + "IoU": 0.9076723016905072, + "TN": 9724, + "TP": 2792, + "n_pred": 3020, + "n_ref": 2848 + }, + "2": { + "Dice": 0.8994999193418294, + "FN": 380, + "FP": 243, + "IoU": 0.8173556141893873, + "TN": 9389, + "TP": 2788, + "n_pred": 3031, + "n_ref": 3168 + }, + "3": { + "Dice": 0.9213422818791946, + "FN": 214, + "FP": 79, + "IoU": 0.8541562966650075, + "TN": 10791, + "TP": 1716, + "n_pred": 1795, + "n_ref": 1930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9562834041386872, + "FN": 496, + "FP": 142, + "IoU": 0.9162289915966386, + "TN": 24384, + "TP": 6978, + "n_pred": 7120, + "n_ref": 7474 + }, + "2": { + "Dice": 0.9276364534452951, + "FN": 104, + "FP": 189, + "IoU": 0.8650391524643022, + "TN": 29829, + "TP": 1878, + "n_pred": 2067, + "n_ref": 1982 + }, + "3": { + "Dice": 0.9705692803437165, + "FN": 109, + "FP": 28, + "IoU": 0.9428213689482471, + "TN": 29604, + "TP": 2259, + "n_pred": 2287, + "n_ref": 2368 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2847271/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset200_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-180__unc-mutual_information__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8872816983220371, + "FN": 249.88168582375474, + "FP": 248.1841379310345, + "IoU": 0.8141960355723912, + "TN": 16422.83846743295, + "TP": 2408.5669731800763, + "n_pred": 2656.7511111111116, + "n_ref": 2658.4486590038314 + }, + "mean": { + "1": { + "Dice": 0.8421830656833436, + "FN": 375.97149425287364, + "FP": 325.75885057471265, + "IoU": 0.7573870996719441, + "TN": 16029.504367816093, + "TP": 2598.2365517241383, + "n_pred": 2923.9954022988504, + "n_ref": 2974.208045977012 + }, + "2": { + "Dice": 0.894220688548993, + "FN": 240.26620689655175, + "FP": 292.6105747126437, + "IoU": 0.8111072901378658, + "TN": 16558.257241379313, + "TP": 2238.3372413793104, + "n_pred": 2530.9478160919543, + "n_ref": 2478.6034482758623 + }, + "3": { + "Dice": 0.925441340733775, + "FN": 133.4073563218391, + "FP": 126.18298850574713, + "IoU": 0.8740937169073637, + "TN": 16680.75379310345, + "TP": 2389.1271264367815, + "n_pred": 2515.310114942529, + "n_ref": 2522.5344827586205 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_000/summary.json b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_000/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..c0f4099b1dbd2a6456af2f44cf9965943d6322ca --- /dev/null +++ b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_000/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.47236471043137757, + "FN": 3991.6800000000003, + "FP": 9768.673333333332, + "IoU": 0.3457252828740522, + "TN": 834465.8533333334, + "TP": 6202.433333333333, + "n_pred": 15971.106666666667, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.30648461132020044, + "FN": 4598.02, + "FP": 17850.92, + "IoU": 0.19379342130789934, + "TN": 826723.66, + "TP": 5256.04, + "n_pred": 23106.96, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.485956909071278, + "FN": 4847.9, + "FP": 5893.98, + "IoU": 0.3400416141501946, + "TN": 838479.16, + "TP": 5207.6, + "n_pred": 11101.58, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.6246526109026543, + "FN": 2529.12, + "FP": 5561.12, + "IoU": 0.5033408131640627, + "TN": 838194.74, + "TP": 8143.66, + "n_pred": 13704.78, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.5089374529012811, + "FN": 3004, + "FP": 13287, + "IoU": 0.3413253547891481, + "TN": 1081187, + "TP": 8442, + "n_pred": 21729, + "n_ref": 11446 + }, + "2": { + "Dice": 0.6844197138314785, + "FN": 3985, + "FP": 4749, + "IoU": 0.5202416918429003, + "TN": 1087715, + "TP": 9471, + "n_pred": 14220, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9044741039200873, + "FN": 2658, + "FP": 1894, + "IoU": 0.8256072331622097, + "TN": 1079818, + "TP": 21550, + "n_pred": 23444, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.29618463084598545, + "FN": 752, + "FP": 18857, + "IoU": 0.1738361070149568, + "TN": 1082185, + "TP": 4126, + "n_pred": 22983, + "n_ref": 4878 + }, + "2": { + "Dice": 0.6493176344661493, + "FN": 6274, + "FP": 4210, + "IoU": 0.48073303615651314, + "TN": 1085730, + "TP": 9706, + "n_pred": 13916, + "n_ref": 15980 + }, + "3": { + "Dice": 0.8708325343122483, + "FN": 2588, + "FP": 2127, + "IoU": 0.7712164588286671, + "TN": 1085311, + "TP": 15894, + "n_pred": 18021, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.03139257941404344, + "FN": 8323, + "FP": 25432, + "IoU": 0.01594659203544983, + "TN": 875138, + "TP": 547, + "n_pred": 25979, + "n_ref": 8870 + }, + "2": { + "Dice": 0.5292244053774561, + "FN": 7389, + "FP": 3992, + "IoU": 0.35982675216559795, + "TN": 891662, + "TP": 6397, + "n_pred": 10389, + "n_ref": 13786 + }, + "3": { + "Dice": 0.8188244147606634, + "FN": 6179, + "FP": 562, + "IoU": 0.6932283607900246, + "TN": 887466, + "TP": 15233, + "n_pred": 15795, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.025536320239259218, + "FN": 6534, + "FP": 27352, + "IoU": 0.012933294494611128, + "TN": 875110, + "TP": 444, + "n_pred": 27796, + "n_ref": 6978 + }, + "2": { + "Dice": 0.41820654347652186, + "FN": 9096, + "FP": 5450, + "IoU": 0.2643875796500455, + "TN": 889666, + "TP": 5228, + "n_pred": 10678, + "n_ref": 14324 + }, + "3": { + "Dice": 0.8137034412643642, + "FN": 5428, + "FP": 619, + "IoU": 0.6859190775463564, + "TN": 890187, + "TP": 13206, + "n_pred": 13825, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.31308929561841375, + "FN": 14017, + "FP": 30569, + "IoU": 0.1855992109156666, + "TN": 1371013, + "TP": 10161, + "n_pred": 40730, + "n_ref": 24178 + }, + "2": { + "Dice": 0.48230650420456495, + "FN": 8058, + "FP": 7025, + "IoU": 0.317789135646117, + "TN": 1403651, + "TP": 7026, + "n_pred": 14051, + "n_ref": 15084 + }, + "3": { + "Dice": 0.8479836340290322, + "FN": 5794, + "FP": 1191, + "IoU": 0.7360864472739638, + "TN": 1399293, + "TP": 19482, + "n_pred": 20673, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.23865295058038508, + "FN": 10683, + "FP": 33131, + "IoU": 0.1354945640378051, + "TN": 1375079, + "TP": 6867, + "n_pred": 39998, + "n_ref": 17550 + }, + "2": { + "Dice": 0.4366122722306418, + "FN": 8874, + "FP": 7111, + "IoU": 0.2792731863474458, + "TN": 1403581, + "TP": 6194, + "n_pred": 13305, + "n_ref": 15068 + }, + "3": { + "Dice": 0.8215216642895785, + "FN": 5996, + "FP": 1262, + "IoU": 0.6971037476003672, + "TN": 1401798, + "TP": 16704, + "n_pred": 17966, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.33343398758597553, + "FN": 4289, + "FP": 15578, + "IoU": 0.20007247543887904, + "TN": 737212, + "TP": 4969, + "n_pred": 20547, + "n_ref": 9258 + }, + "2": { + "Dice": 0.6493273542600897, + "FN": 2894, + "FP": 4144, + "IoU": 0.4807436918990704, + "TN": 748494, + "TP": 6516, + "n_pred": 10660, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9127160817181771, + "FN": 2077, + "FP": 589, + "IoU": 0.8394459500150557, + "TN": 745443, + "TP": 13939, + "n_pred": 14528, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.24636985036024386, + "FN": 1584, + "FP": 18813, + "IoU": 0.14049134044077366, + "TN": 738317, + "TP": 3334, + "n_pred": 22147, + "n_ref": 4918 + }, + "2": { + "Dice": 0.6032851276557758, + "FN": 4480, + "FP": 4408, + "IoU": 0.43193148408538923, + "TN": 746402, + "TP": 6758, + "n_pred": 11166, + "n_ref": 11238 + }, + "3": { + "Dice": 0.8468330480223444, + "FN": 2513, + "FP": 887, + "IoU": 0.734354246425502, + "TN": 749249, + "TP": 9399, + "n_pred": 10286, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.010395863540612262, + "FN": 13654, + "FP": 22519, + "IoU": 0.0052250914391001844, + "TN": 1041909, + "TP": 190, + "n_pred": 22709, + "n_ref": 13844 + }, + "2": { + "Dice": 0.18058953745776535, + "FN": 8320, + "FP": 5746, + "IoU": 0.09925717213114754, + "TN": 1062656, + "TP": 1550, + "n_pred": 7296, + "n_ref": 9870 + }, + "3": { + "Dice": 0.06778245366057374, + "FN": 17349, + "FP": 11670, + "IoU": 0.03508013566535878, + "TN": 1048198, + "TP": 1055, + "n_pred": 12725, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.01944498458290508, + "FN": 12946, + "FP": 22353, + "IoU": 0.009817947207495301, + "TN": 1042623, + "TP": 350, + "n_pred": 22703, + "n_ref": 13296 + }, + "2": { + "Dice": 0.12745262451786013, + "FN": 9660, + "FP": 5949, + "IoU": 0.06806376500089557, + "TN": 1061523, + "TP": 1140, + "n_pred": 7089, + "n_ref": 10800 + }, + "3": { + "Dice": 0.0448356385845159, + "FN": 14602, + "FP": 11985, + "IoU": 0.02293190253941421, + "TN": 1051061, + "TP": 624, + "n_pred": 12609, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2627078059793391, + "FN": 5292, + "FP": 16262, + "IoU": 0.15121682287154445, + "TN": 1080526, + "TP": 3840, + "n_pred": 20102, + "n_ref": 9132 + }, + "2": { + "Dice": 0.43040318474285977, + "FN": 6833, + "FP": 5472, + "IoU": 0.2742125752034918, + "TN": 1088966, + "TP": 4649, + "n_pred": 10121, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8089985994397759, + "FN": 2254, + "FP": 2110, + "IoU": 0.6792591503748346, + "TN": 1092314, + "TP": 9242, + "n_pred": 11352, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.04798383702331846, + "FN": 2482, + "FP": 20136, + "IoU": 0.02458168017940314, + "TN": 1082732, + "TP": 570, + "n_pred": 20706, + "n_ref": 3052 + }, + "2": { + "Dice": 0.1815327529613244, + "FN": 10444, + "FP": 6761, + "IoU": 0.09982734264636635, + "TN": 1086807, + "TP": 1908, + "n_pred": 8669, + "n_ref": 12352 + }, + "3": { + "Dice": 0.283855981416957, + "FN": 1447, + "FP": 7802, + "IoU": 0.1654033567948024, + "TN": 1094838, + "TP": 1833, + "n_pred": 9635, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4560886478840033, + "FN": 1426, + "FP": 17030, + "IoU": 0.2954111628617241, + "TN": 1120686, + "TP": 7738, + "n_pred": 24768, + "n_ref": 9164 + }, + "2": { + "Dice": 0.4988102582180312, + "FN": 10926, + "FP": 6135, + "IoU": 0.33227662322414, + "TN": 1121329, + "TP": 8490, + "n_pred": 14625, + "n_ref": 19416 + }, + "3": { + "Dice": 0.6999762827100957, + "FN": 3076, + "FP": 4514, + "IoU": 0.5384334711748966, + "TN": 1130436, + "TP": 8854, + "n_pred": 13368, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 2466, + "FP": 25701, + "IoU": 0.0, + "TN": 1118713, + "TP": 0, + "n_pred": 25701, + "n_ref": 2466 + }, + "2": { + "Dice": 0.006021761812490685, + "FN": 24335, + "FP": 9008, + "IoU": 0.0030199736873579713, + "TN": 1113436, + "TP": 101, + "n_pred": 9109, + "n_ref": 24436 + }, + "3": { + "Dice": 0.1231643770724775, + "FN": 1936, + "FP": 9170, + "IoU": 0.06562342251388188, + "TN": 1134994, + "TP": 780, + "n_pred": 9950, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.40605500993312627, + "FN": 4590, + "FP": 16637, + "IoU": 0.25474844644173716, + "TN": 772317, + "TP": 7256, + "n_pred": 23893, + "n_ref": 11846 + }, + "2": { + "Dice": 0.619059492345285, + "FN": 2427, + "FP": 5212, + "IoU": 0.4482883143146035, + "TN": 786954, + "TP": 6207, + "n_pred": 11419, + "n_ref": 8634 + }, + "3": { + "Dice": 0.7615910818343046, + "FN": 1138, + "FP": 3567, + "IoU": 0.6149754500818331, + "TN": 788580, + "TP": 7515, + "n_pred": 11082, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.10211184321675959, + "FN": 2428, + "FP": 24145, + "IoU": 0.053802877083036604, + "TN": 772716, + "TP": 1511, + "n_pred": 25656, + "n_ref": 3939 + }, + "2": { + "Dice": 0.1789153573238723, + "FN": 10534, + "FP": 8906, + "IoU": 0.09824659059281937, + "TN": 779242, + "TP": 2118, + "n_pred": 11024, + "n_ref": 12652 + }, + "3": { + "Dice": 0.2444320367268441, + "FN": 876, + "FP": 11303, + "IoU": 0.13923245459043043, + "TN": 786651, + "TP": 1970, + "n_pred": 13273, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4263861386138614, + "FN": 5579, + "FP": 17595, + "IoU": 0.2709598263441029, + "TN": 1316053, + "TP": 8613, + "n_pred": 26208, + "n_ref": 14192 + }, + "2": { + "Dice": 0.6952012913955877, + "FN": 3500, + "FP": 2731, + "IoU": 0.5328034790432631, + "TN": 1334503, + "TP": 7106, + "n_pred": 9837, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9198720822499178, + "FN": 1939, + "FP": 742, + "IoU": 0.8516325401217487, + "TN": 1329770, + "TP": 15389, + "n_pred": 16131, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.22463163747567416, + "FN": 2232, + "FP": 22869, + "IoU": 0.1265267773253993, + "TN": 1319103, + "TP": 3636, + "n_pred": 26505, + "n_ref": 5868 + }, + "2": { + "Dice": 0.5634139856421164, + "FN": 5757, + "FP": 4095, + "IoU": 0.39218952433833054, + "TN": 1331631, + "TP": 6357, + "n_pred": 10452, + "n_ref": 12114 + }, + "3": { + "Dice": 0.8043121236366699, + "FN": 2068, + "FP": 2579, + "IoU": 0.6726773261956751, + "TN": 1333643, + "TP": 9550, + "n_pred": 12129, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5671029615778997, + "FN": 3060, + "FP": 11294, + "IoU": 0.3957736992759724, + "TN": 828212, + "TP": 9402, + "n_pred": 20696, + "n_ref": 12462 + }, + "2": { + "Dice": 0.6551913386219628, + "FN": 2882, + "FP": 4029, + "IoU": 0.48720041552274246, + "TN": 838491, + "TP": 6566, + "n_pred": 10595, + "n_ref": 9448 + }, + "3": { + "Dice": 0.8168919537424099, + "FN": 5102, + "FP": 899, + "IoU": 0.690462681178109, + "TN": 832581, + "TP": 13386, + "n_pred": 14285, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.380322389722522, + "FN": 1476, + "FP": 16323, + "IoU": 0.23481363655904733, + "TN": 828707, + "TP": 5462, + "n_pred": 21785, + "n_ref": 6938 + }, + "2": { + "Dice": 0.6719018632963152, + "FN": 4062, + "FP": 2999, + "IoU": 0.505912812259464, + "TN": 837677, + "TP": 7230, + "n_pred": 10229, + "n_ref": 11292 + }, + "3": { + "Dice": 0.7386118568724969, + "FN": 4605, + "FP": 1334, + "IoU": 0.5855547801814376, + "TN": 837638, + "TP": 8391, + "n_pred": 9725, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1291157342776397, + "FN": 3960, + "FP": 21617, + "IoU": 0.06901321297273687, + "TN": 824495, + "TP": 1896, + "n_pred": 23513, + "n_ref": 5856 + }, + "2": { + "Dice": 0.3573963472691076, + "FN": 6591, + "FP": 8257, + "IoU": 0.2175791747905359, + "TN": 832991, + "TP": 4129, + "n_pred": 12386, + "n_ref": 10720 + }, + "3": { + "Dice": 0.5199983386634548, + "FN": 6696, + "FP": 4861, + "IoU": 0.35134983442779366, + "TN": 834151, + "TP": 6260, + "n_pred": 11121, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.03483846589835632, + "FN": 1643, + "FP": 23900, + "IoU": 0.017728041839716966, + "TN": 825964, + "TP": 461, + "n_pred": 24361, + "n_ref": 2104 + }, + "2": { + "Dice": 0.3651864420808674, + "FN": 8174, + "FP": 7165, + "IoU": 0.22338109462812009, + "TN": 832217, + "TP": 4412, + "n_pred": 11577, + "n_ref": 12586 + }, + "3": { + "Dice": 0.5165895441567392, + "FN": 3499, + "FP": 6321, + "IoU": 0.34824450786487027, + "TN": 836901, + "TP": 5247, + "n_pred": 11568, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.24166429182103163, + "FN": 9272, + "FP": 14677, + "IoU": 0.13743922204213938, + "TN": 769275, + "TP": 3816, + "n_pred": 18493, + "n_ref": 13088 + }, + "2": { + "Dice": 0.505333529961166, + "FN": 3714, + "FP": 6349, + "IoU": 0.338091166217194, + "TN": 781837, + "TP": 5140, + "n_pred": 11489, + "n_ref": 8854 + }, + "3": { + "Dice": 0.7387488198062734, + "FN": 2895, + "FP": 4576, + "IoU": 0.5857269601863148, + "TN": 779006, + "TP": 10563, + "n_pred": 15139, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.10213058945033088, + "FN": 6333, + "FP": 17140, + "IoU": 0.05381328603676234, + "TN": 772232, + "TP": 1335, + "n_pred": 18475, + "n_ref": 7668 + }, + "2": { + "Dice": 0.4493303249963996, + "FN": 4942, + "FP": 6529, + "IoU": 0.28976533960745465, + "TN": 780889, + "TP": 4680, + "n_pred": 11209, + "n_ref": 9622 + }, + "3": { + "Dice": 0.6338145474736258, + "FN": 2183, + "FP": 5731, + "IoU": 0.46393009550904285, + "TN": 782277, + "TP": 6849, + "n_pred": 12580, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42166602490052624, + "FN": 4255, + "FP": 18274, + "IoU": 0.2671589356580574, + "TN": 865928, + "TP": 8213, + "n_pred": 26487, + "n_ref": 12468 + }, + "2": { + "Dice": 0.6402309739703163, + "FN": 3242, + "FP": 4733, + "IoU": 0.47083803330900403, + "TN": 881599, + "TP": 7096, + "n_pred": 11829, + "n_ref": 10338 + }, + "3": { + "Dice": 0.799969778247894, + "FN": 1664, + "FP": 3631, + "IoU": 0.6666246930680602, + "TN": 880787, + "TP": 10588, + "n_pred": 14219, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2527504853797729, + "FN": 2060, + "FP": 23342, + "IoU": 0.14465620580510472, + "TN": 866972, + "TP": 4296, + "n_pred": 27638, + "n_ref": 6356 + }, + "2": { + "Dice": 0.650967996839194, + "FN": 3280, + "FP": 5554, + "IoU": 0.48254451733833176, + "TN": 879598, + "TP": 8238, + "n_pred": 13792, + "n_ref": 11518 + }, + "3": { + "Dice": 0.7142649128767655, + "FN": 1468, + "FP": 4419, + "IoU": 0.555530388825972, + "TN": 883425, + "TP": 7358, + "n_pred": 11777, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49445051469319684, + "FN": 2622, + "FP": 14960, + "IoU": 0.32841864018334604, + "TN": 735868, + "TP": 8598, + "n_pred": 23558, + "n_ref": 11220 + }, + "2": { + "Dice": 0.7734367426078527, + "FN": 2434, + "FP": 2240, + "IoU": 0.6305722415428391, + "TN": 749396, + "TP": 7978, + "n_pred": 10218, + "n_ref": 10412 + }, + "3": { + "Dice": 0.93793454298796, + "FN": 690, + "FP": 774, + "IoU": 0.8831231039437969, + "TN": 749522, + "TP": 11062, + "n_pred": 11836, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2335239651416122, + "FN": 362, + "FP": 22154, + "IoU": 0.13219764125491404, + "TN": 736102, + "TP": 3430, + "n_pred": 25584, + "n_ref": 3792 + }, + "2": { + "Dice": 0.6558466453674121, + "FN": 3934, + "FP": 4145, + "IoU": 0.48792546111428026, + "TN": 746271, + "TP": 7698, + "n_pred": 11843, + "n_ref": 11632 + }, + "3": { + "Dice": 0.8240042344845838, + "FN": 607, + "FP": 2053, + "IoU": 0.7006863958591201, + "TN": 753161, + "TP": 6227, + "n_pred": 8280, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5627619084233594, + "FN": 623, + "FP": 10750, + "IoU": 0.391557885726514, + "TN": 976636, + "TP": 7319, + "n_pred": 18069, + "n_ref": 7942 + }, + "2": { + "Dice": 0.72296679046235, + "FN": 2032, + "FP": 3115, + "IoU": 0.5661299839838152, + "TN": 983465, + "TP": 6716, + "n_pred": 9831, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9439809987255243, + "FN": 251, + "FP": 1683, + "IoU": 0.8939053157057436, + "TN": 977099, + "TP": 16295, + "n_pred": 17978, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2665507617696848, + "FN": 329, + "FP": 15702, + "IoU": 0.15376900337837837, + "TN": 976384, + "TP": 2913, + "n_pred": 18615, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7139778163276034, + "FN": 1543, + "FP": 3898, + "IoU": 0.5551831262262917, + "TN": 983096, + "TP": 6791, + "n_pred": 10689, + "n_ref": 8334 + }, + "3": { + "Dice": 0.8604523819552673, + "FN": 400, + "FP": 2913, + "IoU": 0.7550824277371183, + "TN": 981801, + "TP": 10214, + "n_pred": 13127, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6454460572107631, + "FN": 2918, + "FP": 9613, + "IoU": 0.47650081463842586, + "TN": 734079, + "TP": 11406, + "n_pred": 21019, + "n_ref": 14324 + }, + "2": { + "Dice": 0.7138848472251091, + "FN": 1943, + "FP": 3563, + "IoU": 0.555070707070707, + "TN": 745641, + "TP": 6869, + "n_pred": 10432, + "n_ref": 8812 + }, + "3": { + "Dice": 0.880426814368331, + "FN": 493, + "FP": 2443, + "IoU": 0.7863950527464533, + "TN": 744271, + "TP": 10809, + "n_pred": 13252, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3597958941497567, + "FN": 688, + "FP": 15497, + "IoU": 0.21936043987845463, + "TN": 737283, + "TP": 4548, + "n_pred": 20045, + "n_ref": 5236 + }, + "2": { + "Dice": 0.6257787622871384, + "FN": 2552, + "FP": 5557, + "IoU": 0.4553697360467459, + "TN": 743127, + "TP": 6780, + "n_pred": 12337, + "n_ref": 9332 + }, + "3": { + "Dice": 0.5214521452145214, + "FN": 558, + "FP": 6112, + "IoU": 0.35267857142857145, + "TN": 747712, + "TP": 3634, + "n_pred": 9746, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.22592009594483173, + "FN": 4932, + "FP": 15722, + "IoU": 0.12734493831333446, + "TN": 615308, + "TP": 3014, + "n_pred": 18736, + "n_ref": 7946 + }, + "2": { + "Dice": 0.3792012865183597, + "FN": 1829, + "FP": 9752, + "IoU": 0.23395951845482207, + "TN": 623858, + "TP": 3537, + "n_pred": 13289, + "n_ref": 5366 + }, + "3": { + "Dice": 0.5194405467795229, + "FN": 1596, + "FP": 9021, + "IoU": 0.3508407214918985, + "TN": 622621, + "TP": 5738, + "n_pred": 14759, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1693757683376588, + "FN": 1160, + "FP": 17083, + "IoU": 0.09252350395463364, + "TN": 618873, + "TP": 1860, + "n_pred": 18943, + "n_ref": 3020 + }, + "2": { + "Dice": 0.443508581261604, + "FN": 2455, + "FP": 9834, + "IoU": 0.2849412312347259, + "TN": 621790, + "TP": 4897, + "n_pred": 14731, + "n_ref": 7352 + }, + "3": { + "Dice": 0.2793897696679629, + "FN": 421, + "FP": 11624, + "IoU": 0.16237830319888735, + "TN": 624596, + "TP": 2335, + "n_pred": 13959, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5884665792922673, + "FN": 4215, + "FP": 11485, + "IoU": 0.4168987929433612, + "TN": 956115, + "TP": 11225, + "n_pred": 22710, + "n_ref": 15440 + }, + "2": { + "Dice": 0.7579138930127868, + "FN": 1983, + "FP": 3072, + "IoU": 0.6101943244910549, + "TN": 970072, + "TP": 7913, + "n_pred": 10985, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9440934116690685, + "FN": 443, + "FP": 1070, + "IoU": 0.8941069428891377, + "TN": 968752, + "TP": 12775, + "n_pred": 13845, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.28775284012191743, + "FN": 2034, + "FP": 18530, + "IoU": 0.16805566793429888, + "TN": 958322, + "TP": 4154, + "n_pred": 22684, + "n_ref": 6188 + }, + "2": { + "Dice": 0.5724520339565239, + "FN": 4123, + "FP": 4590, + "IoU": 0.40100371236078647, + "TN": 968494, + "TP": 5833, + "n_pred": 10423, + "n_ref": 9956 + }, + "3": { + "Dice": 0.6752374920835972, + "FN": 659, + "FP": 4469, + "IoU": 0.5097045606654556, + "TN": 972581, + "TP": 5331, + "n_pred": 9800, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4951844933407729, + "FN": 5974, + "FP": 14835, + "IoU": 0.3290665806867645, + "TN": 1017561, + "TP": 10206, + "n_pred": 25041, + "n_ref": 16180 + }, + "2": { + "Dice": 0.6068671560502013, + "FN": 2301, + "FP": 6000, + "IoU": 0.4356132716888768, + "TN": 1033868, + "TP": 6407, + "n_pred": 12407, + "n_ref": 8708 + }, + "3": { + "Dice": 0.8352094341067463, + "FN": 1353, + "FP": 2951, + "IoU": 0.7170468739727829, + "TN": 1033365, + "TP": 10907, + "n_pred": 13858, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2698266263718785, + "FN": 1189, + "FP": 21764, + "IoU": 0.15595351915863792, + "TN": 1021382, + "TP": 4241, + "n_pred": 26005, + "n_ref": 5430 + }, + "2": { + "Dice": 0.41183536194746956, + "FN": 5179, + "FP": 9511, + "IoU": 0.25931528260979175, + "TN": 1028743, + "TP": 5143, + "n_pred": 14654, + "n_ref": 10322 + }, + "3": { + "Dice": 0.39062575971216024, + "FN": 1063, + "FP": 11470, + "IoU": 0.2427190332326284, + "TN": 1032026, + "TP": 4017, + "n_pred": 15487, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.27636062545778795, + "FN": 6823, + "FP": 15900, + "IoU": 0.16033552582957653, + "TN": 462154, + "TP": 4339, + "n_pred": 20239, + "n_ref": 11162 + }, + "2": { + "Dice": 0.3604176123467998, + "FN": 732, + "FP": 6313, + "IoU": 0.21982281284606867, + "TN": 480186, + "TP": 1985, + "n_pred": 8298, + "n_ref": 2717 + }, + "3": { + "Dice": 0.515718868474774, + "FN": 230, + "FP": 8073, + "IoU": 0.34745363093366866, + "TN": 476492, + "TP": 4421, + "n_pred": 12494, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.20557491289198607, + "FN": 3642, + "FP": 19614, + "IoU": 0.1145631067961165, + "TN": 462951, + "TP": 3009, + "n_pred": 22623, + "n_ref": 6651 + }, + "2": { + "Dice": 0.38242574257425743, + "FN": 1197, + "FP": 5789, + "IoU": 0.2364192807957154, + "TN": 480067, + "TP": 2163, + "n_pred": 7952, + "n_ref": 3360 + }, + "3": { + "Dice": 0.26619534311842, + "FN": 58, + "FP": 9491, + "IoU": 0.15353248825458735, + "TN": 477935, + "TP": 1732, + "n_pred": 11223, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5261577107907384, + "FN": 6241, + "FP": 11113, + "IoU": 0.3569972951943384, + "TN": 453491, + "TP": 9635, + "n_pred": 20748, + "n_ref": 15876 + }, + "2": { + "Dice": 0.4919931369745496, + "FN": 1078, + "FP": 6028, + "IoU": 0.32625391106475776, + "TN": 469933, + "TP": 3441, + "n_pred": 9469, + "n_ref": 4519 + }, + "3": { + "Dice": 0.6362029790456956, + "FN": 660, + "FP": 6545, + "IoU": 0.4664938911514254, + "TN": 466975, + "TP": 6300, + "n_pred": 12845, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.44135150700710307, + "FN": 4714, + "FP": 12746, + "IoU": 0.2831629511023525, + "TN": 456123, + "TP": 6897, + "n_pred": 19643, + "n_ref": 11611 + }, + "2": { + "Dice": 0.4068407960199005, + "FN": 2391, + "FP": 7147, + "IoU": 0.2553673198532282, + "TN": 467671, + "TP": 3271, + "n_pred": 10418, + "n_ref": 5662 + }, + "3": { + "Dice": 0.2785303999132979, + "FN": 236, + "FP": 13078, + "IoU": 0.16179803575925458, + "TN": 464596, + "TP": 2570, + "n_pred": 15648, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4538128841338493, + "FN": 10704, + "FP": 13290, + "IoU": 0.29350450503503916, + "TN": 610678, + "TP": 9968, + "n_pred": 23258, + "n_ref": 20672 + }, + "2": { + "Dice": 0.5855770246014148, + "FN": 3520, + "FP": 4330, + "IoU": 0.414004180352344, + "TN": 631244, + "TP": 5546, + "n_pred": 9876, + "n_ref": 9066 + }, + "3": { + "Dice": 0.8295276822020644, + "FN": 3390, + "FP": 970, + "IoU": 0.7087119187600214, + "TN": 629672, + "TP": 10608, + "n_pred": 11578, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4168105929763961, + "FN": 7006, + "FP": 16293, + "IoU": 0.26327272727272727, + "TN": 613015, + "TP": 8326, + "n_pred": 24619, + "n_ref": 15332 + }, + "2": { + "Dice": 0.6393594904233202, + "FN": 4939, + "FP": 3214, + "IoU": 0.46989596879063716, + "TN": 629260, + "TP": 7227, + "n_pred": 10441, + "n_ref": 12166 + }, + "3": { + "Dice": 0.761082826275922, + "FN": 1433, + "FP": 2415, + "IoU": 0.6143129197153453, + "TN": 634663, + "TP": 6129, + "n_pred": 8544, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6303270114158366, + "FN": 8193, + "FP": 8063, + "IoU": 0.4602025568653495, + "TN": 534365, + "TP": 13859, + "n_pred": 21922, + "n_ref": 22052 + }, + "2": { + "Dice": 0.4034640855832909, + "FN": 1301, + "FP": 8067, + "IoU": 0.2527121888959796, + "TN": 551944, + "TP": 3168, + "n_pred": 11235, + "n_ref": 4469 + }, + "3": { + "Dice": 0.5010543756589848, + "FN": 1244, + "FP": 12006, + "IoU": 0.33427121539466415, + "TN": 544577, + "TP": 6653, + "n_pred": 18659, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.38861249309010504, + "FN": 2808, + "FP": 14888, + "IoU": 0.2411663807890223, + "TN": 541160, + "TP": 5624, + "n_pred": 20512, + "n_ref": 8432 + }, + "2": { + "Dice": 0.3777403035413153, + "FN": 1615, + "FP": 9086, + "IoU": 0.23284823284823286, + "TN": 550531, + "TP": 3248, + "n_pred": 12334, + "n_ref": 4863 + }, + "3": { + "Dice": 0.2620596814000449, + "FN": 532, + "FP": 15913, + "IoU": 0.15078750322747225, + "TN": 545115, + "TP": 2920, + "n_pred": 18833, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.27, + "FN": 4362, + "FP": 13012, + "IoU": 0.15606936416184972, + "TN": 398293, + "TP": 3213, + "n_pred": 16225, + "n_ref": 7575 + }, + "2": { + "Dice": 0.17158655132435566, + "FN": 1894, + "FP": 7395, + "IoU": 0.09384450297531947, + "TN": 408629, + "TP": 962, + "n_pred": 8357, + "n_ref": 2856 + }, + "3": { + "Dice": 0.3603931963772918, + "FN": 936, + "FP": 10646, + "IoU": 0.21980464802963962, + "TN": 404035, + "TP": 3263, + "n_pred": 13909, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1629780535234744, + "FN": 2977, + "FP": 15101, + "IoU": 0.08871862082871257, + "TN": 399042, + "TP": 1760, + "n_pred": 16861, + "n_ref": 4737 + }, + "2": { + "Dice": 0.12342096278593377, + "FN": 2270, + "FP": 8000, + "IoU": 0.06576912580733194, + "TN": 407887, + "TP": 723, + "n_pred": 8723, + "n_ref": 2993 + }, + "3": { + "Dice": 0.19439356092145435, + "FN": 632, + "FP": 13881, + "IoU": 0.10766109198229218, + "TN": 402616, + "TP": 1751, + "n_pred": 15632, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4839664665357054, + "FN": 4820, + "FP": 13831, + "IoU": 0.31923203270431066, + "TN": 469113, + "TP": 8746, + "n_pred": 22577, + "n_ref": 13566 + }, + "2": { + "Dice": 0.41575274177467597, + "FN": 3502, + "FP": 8218, + "IoU": 0.26242920075519194, + "TN": 480620, + "TP": 4170, + "n_pred": 12388, + "n_ref": 7672 + }, + "3": { + "Dice": 0.6131429283075263, + "FN": 387, + "FP": 8932, + "IoU": 0.44210967432950193, + "TN": 479806, + "TP": 7385, + "n_pred": 16317, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.39022902456607333, + "FN": 6225, + "FP": 15767, + "IoU": 0.24241275965413897, + "TN": 467481, + "TP": 7037, + "n_pred": 22804, + "n_ref": 13262 + }, + "2": { + "Dice": 0.3319584696344759, + "FN": 4975, + "FP": 9116, + "IoU": 0.19901091405184174, + "TN": 478918, + "TP": 3501, + "n_pred": 12617, + "n_ref": 8476 + }, + "3": { + "Dice": 0.3274818401937046, + "FN": 154, + "FP": 13178, + "IoU": 0.19580166485703945, + "TN": 479932, + "TP": 3246, + "n_pred": 16424, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_000/summary_cross_val.json b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_000/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..21470c0c2f8ff54044f8b85a0b582fcc8a35c05a --- /dev/null +++ b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_000/summary_cross_val.json @@ -0,0 +1,1356 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.37587130227013327, + "FN": 43.05555555555555, + "FP": 12.5, + "IoU": 0.30988045782092893, + "TN": 700.0, + "TP": 44.444444444444436, + "n_pred": 56.94444444444445, + "n_ref": 87.5 + }, + "mean": { + "1": { + "Dice": 0.5436991869918699, + "FN": 11.666666666666666, + "FP": 10.666666666666666, + "IoU": 0.41932141932141925, + "TN": 771.1666666666666, + "TP": 6.5, + "n_pred": 17.166666666666668, + "n_ref": 18.166666666666668 + }, + "2": { + "Dice": 0.22266329065316262, + "FN": 88.83333333333333, + "FP": 16.5, + "IoU": 0.18466848143107137, + "TN": 654.6666666666666, + "TP": 40.0, + "n_pred": 56.5, + "n_ref": 128.83333333333334 + }, + "3": { + "Dice": 0.36125142916536745, + "FN": 28.666666666666668, + "FP": 10.333333333333334, + "IoU": 0.3256514727102962, + "TN": 674.1666666666666, + "TP": 86.83333333333333, + "n_pred": 97.16666666666667, + "n_ref": 115.5 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5, + "FN": 8, + "FP": 0, + "IoU": 0.3333333333333333, + "TN": 788, + "TP": 4, + "n_pred": 4, + "n_ref": 12 + }, + "2": { + "Dice": 0.0, + "FN": 432, + "FP": 4, + "IoU": 0.0, + "TN": 364, + "TP": 0, + "n_pred": 4, + "n_ref": 432 + }, + "3": { + "Dice": 0.0, + "FN": 12, + "FP": 0, + "IoU": 0.0, + "TN": 788, + "TP": 0, + "n_pred": 0, + "n_ref": 12 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.25609756097560976, + "FN": 62, + "FP": 60, + "IoU": 0.14685314685314685, + "TN": 657, + "TP": 21, + "n_pred": 81, + "n_ref": 83 + }, + "2": { + "Dice": 0.2275449101796407, + "FN": 71, + "FP": 58, + "IoU": 0.12837837837837837, + "TN": 652, + "TP": 19, + "n_pred": 77, + "n_ref": 90 + }, + "3": { + "Dice": 0.13333333333333333, + "FN": 133, + "FP": 36, + "IoU": 0.07142857142857142, + "TN": 618, + "TP": 13, + "n_pred": 49, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.875, + "FN": 0, + "FP": 4, + "IoU": 0.7777777777777778, + "TN": 782, + "TP": 14, + "n_pred": 18, + "n_ref": 14 + }, + "2": { + "Dice": 0.8857715430861723, + "FN": 30, + "FP": 27, + "IoU": 0.7949640287769785, + "TN": 522, + "TP": 221, + "n_pred": 248, + "n_ref": 251 + }, + "3": { + "Dice": 0.950420954162769, + "FN": 27, + "FP": 26, + "IoU": 0.9055258467023173, + "TN": 239, + "TP": 508, + "n_pred": 534, + "n_ref": 535 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.5886342461106396, + "FN": 31.722222222222218, + "FP": 31.999999999999996, + "IoU": 0.5196452797940386, + "TN": 632.0555555555555, + "TP": 104.22222222222223, + "n_pred": 136.22222222222223, + "n_ref": 135.94444444444446 + }, + "mean": { + "1": { + "Dice": 0.5999840242830897, + "FN": 1.0, + "FP": 51.5, + "IoU": 0.5517863778733344, + "TN": 572.1666666666666, + "TP": 175.33333333333334, + "n_pred": 226.83333333333334, + "n_ref": 176.33333333333334 + }, + "2": { + "Dice": 0.34410017393291975, + "FN": 42.0, + "FP": 43.666666666666664, + "IoU": 0.2936242692177088, + "TN": 653.3333333333334, + "TP": 61.0, + "n_pred": 104.66666666666667, + "n_ref": 103.0 + }, + "3": { + "Dice": 0.8218185401159094, + "FN": 52.166666666666664, + "FP": 0.8333333333333334, + "IoU": 0.7135251922910726, + "TN": 670.6666666666666, + "TP": 76.33333333333333, + "n_pred": 77.16666666666667, + "n_ref": 128.5 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9794392523364486, + "FN": 0, + "FP": 22, + "IoU": 0.9597069597069597, + "TN": 254, + "TP": 524, + "n_pred": 546, + "n_ref": 524 + }, + "2": { + "Dice": 0.9246231155778895, + "FN": 24, + "FP": 6, + "IoU": 0.8598130841121495, + "TN": 586, + "TP": 184, + "n_pred": 190, + "n_ref": 208 + }, + "3": { + "Dice": 0.9393939393939394, + "FN": 6, + "FP": 2, + "IoU": 0.8857142857142857, + "TN": 730, + "TP": 62, + "n_pred": 64, + "n_ref": 68 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 62, + "IoU": 0.0, + "TN": 738, + "TP": 0, + "n_pred": 62, + "n_ref": 0 + }, + "2": { + "Dice": 0.06666666666666667, + "FN": 149, + "FP": 159, + "IoU": 0.034482758620689655, + "TN": 481, + "TP": 11, + "n_pred": 170, + "n_ref": 160 + }, + "3": { + "Dice": 0.6633165829145728, + "FN": 266, + "FP": 2, + "IoU": 0.49624060150375937, + "TN": 268, + "TP": 264, + "n_pred": 266, + "n_ref": 530 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 772, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7292110874200426, + "FN": 79, + "FP": 48, + "IoU": 0.5738255033557047, + "TN": 502, + "TP": 171, + "n_pred": 219, + "n_ref": 250 + }, + "3": { + "Dice": 0.8627450980392157, + "FN": 41, + "FP": 1, + "IoU": 0.7586206896551724, + "TN": 626, + "TP": 132, + "n_pred": 133, + "n_ref": 173 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8205128205128205, + "FN": 6, + "FP": 225, + "IoU": 0.6956521739130435, + "TN": 41, + "TP": 528, + "n_pred": 753, + "n_ref": 534 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 21, + "IoU": 0.0, + "TN": 779, + "TP": 0, + "n_pred": 21, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.6619137979640571, + "FN": 33.94444444444445, + "FP": 7.5, + "IoU": 0.5824063827786431, + "TN": 675.388888888889, + "TP": 83.16666666666667, + "n_pred": 90.66666666666667, + "n_ref": 117.11111111111113 + }, + "mean": { + "1": { + "Dice": 0.8911392405063291, + "FN": 14.333333333333334, + "FP": 0.0, + "IoU": 0.8036529680365296, + "TN": 727.0, + "TP": 58.666666666666664, + "n_pred": 58.666666666666664, + "n_ref": 73.0 + }, + "2": { + "Dice": 0.44945250827603767, + "FN": 54.666666666666664, + "FP": 10.666666666666666, + "IoU": 0.33942028985507244, + "TN": 707.3333333333334, + "TP": 27.333333333333332, + "n_pred": 38.0, + "n_ref": 82.0 + }, + "3": { + "Dice": 0.6451496451098047, + "FN": 32.833333333333336, + "FP": 11.833333333333334, + "IoU": 0.6041458904443271, + "TN": 591.8333333333334, + "TP": 163.5, + "n_pred": 175.33333333333334, + "n_ref": 196.33333333333334 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 226, + "FP": 0, + "IoU": 0.0, + "TN": 574, + "TP": 0, + "n_pred": 0, + "n_ref": 226 + }, + "3": { + "Dice": 0.05181347150259067, + "FN": 183, + "FP": 0, + "IoU": 0.026595744680851064, + "TN": 612, + "TP": 5, + "n_pred": 5, + "n_ref": 188 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7012987012987013, + "FN": 36, + "FP": 10, + "IoU": 0.54, + "TN": 700, + "TP": 54, + "n_pred": 64, + "n_ref": 90 + }, + "3": { + "Dice": 0.9831460674157303, + "FN": 10, + "FP": 14, + "IoU": 0.9668508287292817, + "TN": 76, + "TP": 700, + "n_pred": 714, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6470588235294118, + "FN": 66, + "FP": 54, + "IoU": 0.4782608695652174, + "TN": 570, + "TP": 110, + "n_pred": 164, + "n_ref": 176 + }, + "3": { + "Dice": 0.9004893964110929, + "FN": 4, + "FP": 57, + "IoU": 0.8189910979228486, + "TN": 463, + "TP": 276, + "n_pred": 333, + "n_ref": 280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8911392405063291, + "FN": 86, + "FP": 0, + "IoU": 0.8036529680365296, + "TN": 362, + "TP": 352, + "n_pred": 352, + "n_ref": 438 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.45156182328432637, + "FN": 4.444444444444444, + "FP": 6.5, + "IoU": 0.38819733658835226, + "TN": 706.0555555555555, + "TP": 83.00000000000001, + "n_pred": 89.5, + "n_ref": 87.44444444444444 + }, + "mean": { + "1": { + "Dice": 0.6478861332028961, + "FN": 8.166666666666666, + "FP": 5.166666666666667, + "IoU": 0.6304138223610629, + "TN": 568.8333333333334, + "TP": 217.83333333333334, + "n_pred": 223.0, + "n_ref": 226.0 + }, + "2": { + "Dice": 0.3067993366500829, + "FN": 4.166666666666667, + "FP": 14.333333333333334, + "IoU": 0.28417818740399386, + "TN": 750.6666666666666, + "TP": 30.833333333333332, + "n_pred": 45.166666666666664, + "n_ref": 35.0 + }, + "3": { + "Dice": 0.4, + "FN": 1.0, + "FP": 0.0, + "IoU": 0.25, + "TN": 798.6666666666666, + "TP": 0.3333333333333333, + "n_pred": 0.3333333333333333, + "n_ref": 1.3333333333333333 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9869109947643979, + "FN": 20, + "FP": 0, + "IoU": 0.9741602067183462, + "TN": 26, + "TP": 754, + "n_pred": 754, + "n_ref": 774 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 790, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 15, + "IoU": 0.0, + "TN": 785, + "TP": 0, + "n_pred": 15, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 64, + "IoU": 0.0, + "TN": 736, + "TP": 0, + "n_pred": 64, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9567474048442907, + "FN": 29, + "FP": 21, + "IoU": 0.9170812603648425, + "TN": 197, + "TP": 553, + "n_pred": 574, + "n_ref": 582 + }, + "2": { + "Dice": 0.9203980099502488, + "FN": 25, + "FP": 7, + "IoU": 0.8525345622119815, + "TN": 583, + "TP": 185, + "n_pred": 192, + "n_ref": 210 + }, + "3": { + "Dice": 0.4, + "FN": 6, + "FP": 0, + "IoU": 0.25, + "TN": 792, + "TP": 2, + "n_pred": 2, + "n_ref": 8 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.4824871883068646, + "FN": 12.222222222222221, + "FP": 23.61111111111111, + "IoU": 0.42529506321465305, + "TN": 697.5, + "TP": 66.66666666666667, + "n_pred": 90.27777777777779, + "n_ref": 78.88888888888889 + }, + "mean": { + "1": { + "Dice": 0.14339622641509434, + "FN": 22.5, + "FP": 54.5, + "IoU": 0.09134615384615385, + "TN": 713.5, + "TP": 9.5, + "n_pred": 64.0, + "n_ref": 32.0 + }, + "2": { + "Dice": 0.3503184713375796, + "FN": 7.5, + "FP": 16.333333333333332, + "IoU": 0.2696078431372549, + "TN": 748.6666666666666, + "TP": 27.5, + "n_pred": 43.833333333333336, + "n_ref": 35.0 + }, + "3": { + "Dice": 0.9537468671679198, + "FN": 6.666666666666667, + "FP": 0.0, + "IoU": 0.9149311926605505, + "TN": 630.3333333333334, + "TP": 163.0, + "n_pred": 163.0, + "n_ref": 169.66666666666666 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": 0.9974937343358395, + "FN": 4, + "FP": 0, + "IoU": 0.995, + "TN": 0, + "TP": 796, + "n_pred": 796, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 310, + "IoU": 0.0, + "TN": 490, + "TP": 0, + "n_pred": 310, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.43018867924528303, + "FN": 135, + "FP": 16, + "IoU": 0.27403846153846156, + "TN": 592, + "TP": 57, + "n_pred": 73, + "n_ref": 192 + }, + "2": { + "Dice": 0.7006369426751592, + "FN": 45, + "FP": 96, + "IoU": 0.5392156862745098, + "TN": 494, + "TP": 165, + "n_pred": 261, + "n_ref": 210 + }, + "3": { + "Dice": 0.91, + "FN": 36, + "FP": 0, + "IoU": 0.8348623853211009, + "TN": 582, + "TP": 182, + "n_pred": 182, + "n_ref": 218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2853262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.5120936715872042, + "FN": 25.077777777777776, + "FP": 16.422222222222224, + "IoU": 0.44508490403932316, + "TN": 682.2, + "TP": 76.3, + "n_pred": 92.72222222222223, + "n_ref": 101.37777777777778 + }, + "mean": { + "1": { + "Dice": 0.5652209622798557, + "FN": 11.533333333333333, + "FP": 24.366666666666667, + "IoU": 0.4993041482877, + "TN": 670.5333333333333, + "TP": 93.56666666666668, + "n_pred": 117.93333333333335, + "n_ref": 105.1 + }, + "2": { + "Dice": 0.3346667561699565, + "FN": 39.43333333333332, + "FP": 20.299999999999997, + "IoU": 0.2742998142090203, + "TN": 702.9333333333333, + "TP": 37.333333333333336, + "n_pred": 57.63333333333334, + "n_ref": 76.76666666666668 + }, + "3": { + "Dice": 0.6363932963118002, + "FN": 24.266666666666666, + "FP": 4.6, + "IoU": 0.5616507496212493, + "TN": 673.1333333333333, + "TP": 97.99999999999999, + "n_pred": 102.6, + "n_ref": 122.26666666666668 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_001/summary.json b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_001/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..bdc50932cb6c6f7d874cbe62f9276330e8de8b01 --- /dev/null +++ b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_001/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.6326343590911992, + "FN": 3724.02, + "FP": 3033.3799999999997, + "IoU": 0.4956850361620604, + "TN": 841201.1466666666, + "TP": 6470.093333333333, + "n_pred": 9503.473333333333, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.49547406342560807, + "FN": 4441.58, + "FP": 5490.84, + "IoU": 0.34763733195794694, + "TN": 839083.74, + "TP": 5412.48, + "n_pred": 10903.32, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.5914802992227743, + "FN": 4744.54, + "FP": 2447.58, + "IoU": 0.4358395650858425, + "TN": 841925.56, + "TP": 5310.96, + "n_pred": 7758.54, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8109487146252152, + "FN": 1985.94, + "FP": 1161.72, + "IoU": 0.7035782114423916, + "TN": 842594.14, + "TP": 8686.84, + "n_pred": 9848.56, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7545011086474501, + "FN": 2939, + "FP": 2597, + "IoU": 0.6057822402620523, + "TN": 1091877, + "TP": 8507, + "n_pred": 11104, + "n_ref": 11446 + }, + "2": { + "Dice": 0.6794836146971202, + "FN": 4903, + "FP": 3166, + "IoU": 0.5145590181686921, + "TN": 1089298, + "TP": 8553, + "n_pred": 11719, + "n_ref": 13456 + }, + "3": { + "Dice": 0.8846918489065606, + "FN": 3738, + "FP": 1598, + "IoU": 0.7932263814616756, + "TN": 1080114, + "TP": 20470, + "n_pred": 22068, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6267949254147498, + "FN": 382, + "FP": 4972, + "IoU": 0.4564467005076142, + "TN": 1096070, + "TP": 4496, + "n_pred": 9468, + "n_ref": 4878 + }, + "2": { + "Dice": 0.6404019807748325, + "FN": 7186, + "FP": 2690, + "IoU": 0.4710230316014997, + "TN": 1087250, + "TP": 8794, + "n_pred": 11484, + "n_ref": 15980 + }, + "3": { + "Dice": 0.848245664573371, + "FN": 3759, + "FP": 1509, + "IoU": 0.7364814166374869, + "TN": 1085929, + "TP": 14723, + "n_pred": 16232, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.34772109870208273, + "FN": 4838, + "FP": 10289, + "IoU": 0.21044939715016442, + "TN": 890281, + "TP": 4032, + "n_pred": 14321, + "n_ref": 8870 + }, + "2": { + "Dice": 0.6750810460341474, + "FN": 5977, + "FP": 1540, + "IoU": 0.5095262951846535, + "TN": 894114, + "TP": 7809, + "n_pred": 9349, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9015943379593482, + "FN": 3514, + "FP": 393, + "IoU": 0.8208209126347168, + "TN": 887635, + "TP": 17898, + "n_pred": 18291, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.16972053462940462, + "FN": 5232, + "FP": 11851, + "IoU": 0.09272930054702852, + "TN": 890611, + "TP": 1746, + "n_pred": 13597, + "n_ref": 6978 + }, + "2": { + "Dice": 0.606725393867525, + "FN": 7161, + "FP": 2125, + "IoU": 0.435467201653596, + "TN": 892991, + "TP": 7163, + "n_pred": 9288, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9184205251553418, + "FN": 2597, + "FP": 252, + "IoU": 0.8491475166790216, + "TN": 890554, + "TP": 16037, + "n_pred": 16289, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5913142620232172, + "FN": 12768, + "FP": 3004, + "IoU": 0.41976307850783606, + "TN": 1398578, + "TP": 11410, + "n_pred": 14414, + "n_ref": 24178 + }, + "2": { + "Dice": 0.6109432421396488, + "FN": 7603, + "FP": 1925, + "IoU": 0.43982597448409666, + "TN": 1408751, + "TP": 7481, + "n_pred": 9406, + "n_ref": 15084 + }, + "3": { + "Dice": 0.8895664104183454, + "FN": 4852, + "FP": 219, + "IoU": 0.8010982545597176, + "TN": 1400265, + "TP": 20424, + "n_pred": 20643, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.560285297455017, + "FN": 8909, + "FP": 4654, + "IoU": 0.3891641145739506, + "TN": 1403556, + "TP": 8641, + "n_pred": 13295, + "n_ref": 17550 + }, + "2": { + "Dice": 0.5954241980133529, + "FN": 7755, + "FP": 2183, + "IoU": 0.4239174540606342, + "TN": 1408509, + "TP": 7313, + "n_pred": 9496, + "n_ref": 15068 + }, + "3": { + "Dice": 0.8740606565001346, + "FN": 4846, + "FP": 299, + "IoU": 0.7762946215052828, + "TN": 1402761, + "TP": 17854, + "n_pred": 18153, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.60032425784089, + "FN": 3889, + "FP": 3260, + "IoU": 0.4289023805719763, + "TN": 749530, + "TP": 5369, + "n_pred": 8629, + "n_ref": 9258 + }, + "2": { + "Dice": 0.6925188743994509, + "FN": 3356, + "FP": 2020, + "IoU": 0.5296587926509186, + "TN": 750618, + "TP": 6054, + "n_pred": 8074, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9194630872483222, + "FN": 1905, + "FP": 567, + "IoU": 0.8509316770186336, + "TN": 745465, + "TP": 14111, + "n_pred": 14678, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5467085600429151, + "FN": 1351, + "FP": 4564, + "IoU": 0.3761864585530479, + "TN": 752566, + "TP": 3567, + "n_pred": 8131, + "n_ref": 4918 + }, + "2": { + "Dice": 0.6875987361769352, + "FN": 4274, + "FP": 2054, + "IoU": 0.5239241649112248, + "TN": 748756, + "TP": 6964, + "n_pred": 9018, + "n_ref": 11238 + }, + "3": { + "Dice": 0.8893099782779498, + "FN": 2291, + "FP": 104, + "IoU": 0.8006824234354194, + "TN": 750032, + "TP": 9621, + "n_pred": 9725, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.16906744196290913, + "FN": 11925, + "FP": 6938, + "IoU": 0.09233952458858628, + "TN": 1057490, + "TP": 1919, + "n_pred": 8857, + "n_ref": 13844 + }, + "2": { + "Dice": 0.4011104340171982, + "FN": 6908, + "FP": 1937, + "IoU": 0.2508681290759719, + "TN": 1066465, + "TP": 2962, + "n_pred": 4899, + "n_ref": 9870 + }, + "3": { + "Dice": 0.6064439474419905, + "FN": 9727, + "FP": 1535, + "IoU": 0.4351772907367471, + "TN": 1058333, + "TP": 8677, + "n_pred": 10212, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.199745825846882, + "FN": 11017, + "FP": 7244, + "IoU": 0.11095423563777994, + "TN": 1057732, + "TP": 2279, + "n_pred": 9523, + "n_ref": 13296 + }, + "2": { + "Dice": 0.4106373681253511, + "FN": 7511, + "FP": 1930, + "IoU": 0.2583660644147683, + "TN": 1065542, + "TP": 3289, + "n_pred": 5219, + "n_ref": 10800 + }, + "3": { + "Dice": 0.6454684978946126, + "FN": 7025, + "FP": 1984, + "IoU": 0.47652527600232425, + "TN": 1061062, + "TP": 8201, + "n_pred": 10185, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49578080015884046, + "FN": 4138, + "FP": 6020, + "IoU": 0.3295934530095037, + "TN": 1090768, + "TP": 4994, + "n_pred": 11014, + "n_ref": 9132 + }, + "2": { + "Dice": 0.5450101409329658, + "FN": 6242, + "FP": 2507, + "IoU": 0.37458002716420047, + "TN": 1091931, + "TP": 5240, + "n_pred": 7747, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8526759937819232, + "FN": 1897, + "FP": 1420, + "IoU": 0.7431867451223289, + "TN": 1093004, + "TP": 9599, + "n_pred": 11019, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2504135829342621, + "FN": 1614, + "FP": 6995, + "IoU": 0.14312730168209417, + "TN": 1095873, + "TP": 1438, + "n_pred": 8433, + "n_ref": 3052 + }, + "2": { + "Dice": 0.4696684357701307, + "FN": 8237, + "FP": 1056, + "IoU": 0.3069063245823389, + "TN": 1092512, + "TP": 4115, + "n_pred": 5171, + "n_ref": 12352 + }, + "3": { + "Dice": 0.6307953506595272, + "FN": 865, + "FP": 1962, + "IoU": 0.4607020221289584, + "TN": 1100678, + "TP": 2415, + "n_pred": 4377, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7685898112013501, + "FN": 1877, + "FP": 2511, + "IoU": 0.6241541755888651, + "TN": 1135205, + "TP": 7287, + "n_pred": 9798, + "n_ref": 9164 + }, + "2": { + "Dice": 0.45052979221136646, + "FN": 12868, + "FP": 3104, + "IoU": 0.29076376554174066, + "TN": 1124360, + "TP": 6548, + "n_pred": 9652, + "n_ref": 19416 + }, + "3": { + "Dice": 0.8412045889101338, + "FN": 3131, + "FP": 191, + "IoU": 0.7259302037785661, + "TN": 1134759, + "TP": 8799, + "n_pred": 8990, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 2466, + "FP": 3777, + "IoU": 0.0, + "TN": 1140637, + "TP": 0, + "n_pred": 3777, + "n_ref": 2466 + }, + "2": { + "Dice": 0.0033187835936654524, + "FN": 24390, + "FP": 3239, + "IoU": 0.0016621499548328817, + "TN": 1119205, + "TP": 46, + "n_pred": 3285, + "n_ref": 24436 + }, + "3": { + "Dice": 0.1408995080815179, + "FN": 2315, + "FP": 2575, + "IoU": 0.07578907578907579, + "TN": 1141589, + "TP": 401, + "n_pred": 2976, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7638714891897354, + "FN": 2395, + "FP": 3448, + "IoU": 0.6179547534981038, + "TN": 785506, + "TP": 9451, + "n_pred": 12899, + "n_ref": 11846 + }, + "2": { + "Dice": 0.7665415153566812, + "FN": 2407, + "FP": 1386, + "IoU": 0.6214570858283434, + "TN": 790780, + "TP": 6227, + "n_pred": 7613, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9210914019682951, + "FN": 838, + "FP": 501, + "IoU": 0.853725147476513, + "TN": 791646, + "TP": 7815, + "n_pred": 8316, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3932752927048934, + "FN": 1319, + "FP": 6765, + "IoU": 0.24476831091180867, + "TN": 790096, + "TP": 2620, + "n_pred": 9385, + "n_ref": 3939 + }, + "2": { + "Dice": 0.39419652210349887, + "FN": 8889, + "FP": 2677, + "IoU": 0.2454824189444843, + "TN": 785471, + "TP": 3763, + "n_pred": 6440, + "n_ref": 12652 + }, + "3": { + "Dice": 0.7574310796242106, + "FN": 387, + "FP": 1188, + "IoU": 0.6095686663361428, + "TN": 796766, + "TP": 2459, + "n_pred": 3647, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6024540861336114, + "FN": 6680, + "FP": 3234, + "IoU": 0.43107999540915876, + "TN": 1330414, + "TP": 7512, + "n_pred": 10746, + "n_ref": 14192 + }, + "2": { + "Dice": 0.7191550648103696, + "FN": 3865, + "FP": 1400, + "IoU": 0.5614692653673163, + "TN": 1335834, + "TP": 6741, + "n_pred": 8141, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9033180955934944, + "FN": 2804, + "FP": 305, + "IoU": 0.8236828673509896, + "TN": 1330207, + "TP": 14524, + "n_pred": 14829, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5744494578759513, + "FN": 1603, + "FP": 4716, + "IoU": 0.40296674225245654, + "TN": 1337256, + "TP": 4265, + "n_pred": 8981, + "n_ref": 5868 + }, + "2": { + "Dice": 0.6403852837495656, + "FN": 5665, + "FP": 1578, + "IoU": 0.4710049664037394, + "TN": 1334148, + "TP": 6449, + "n_pred": 8027, + "n_ref": 12114 + }, + "3": { + "Dice": 0.8730839975475169, + "FN": 2362, + "FP": 329, + "IoU": 0.7747551686615887, + "TN": 1335893, + "TP": 9256, + "n_pred": 9585, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6480180930841567, + "FN": 4296, + "FP": 4575, + "IoU": 0.4793097376298644, + "TN": 834931, + "TP": 8166, + "n_pred": 12741, + "n_ref": 12462 + }, + "2": { + "Dice": 0.6645249115164715, + "FN": 3346, + "FP": 2815, + "IoU": 0.49759438962733427, + "TN": 839705, + "TP": 6102, + "n_pred": 8917, + "n_ref": 9448 + }, + "3": { + "Dice": 0.8409836559010324, + "FN": 4518, + "FP": 765, + "IoU": 0.7256012050070119, + "TN": 832715, + "TP": 13970, + "n_pred": 14735, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5580818520049607, + "FN": 1538, + "FP": 7014, + "IoU": 0.38704128440366975, + "TN": 838016, + "TP": 5400, + "n_pred": 12414, + "n_ref": 6938 + }, + "2": { + "Dice": 0.6446621970087674, + "FN": 5042, + "FP": 1848, + "IoU": 0.4756468797564688, + "TN": 838828, + "TP": 6250, + "n_pred": 8098, + "n_ref": 11292 + }, + "3": { + "Dice": 0.7781971780354093, + "FN": 4337, + "FP": 599, + "IoU": 0.6369253401986025, + "TN": 838373, + "TP": 8659, + "n_pred": 9258, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4843176402395827, + "FN": 2096, + "FP": 5911, + "IoU": 0.31953769015042066, + "TN": 840201, + "TP": 3760, + "n_pred": 9671, + "n_ref": 5856 + }, + "2": { + "Dice": 0.7118576284743051, + "FN": 3600, + "FP": 2164, + "IoU": 0.55262340887923, + "TN": 839084, + "TP": 7120, + "n_pred": 9284, + "n_ref": 10720 + }, + "3": { + "Dice": 0.878863897274544, + "FN": 2621, + "FP": 228, + "IoU": 0.7839047330097088, + "TN": 838784, + "TP": 10335, + "n_pred": 10563, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.20577800304105423, + "FN": 886, + "FP": 8516, + "IoU": 0.11468926553672316, + "TN": 841348, + "TP": 1218, + "n_pred": 9734, + "n_ref": 2104 + }, + "2": { + "Dice": 0.6765943671090968, + "FN": 5271, + "FP": 1722, + "IoU": 0.511252446183953, + "TN": 837660, + "TP": 7315, + "n_pred": 9037, + "n_ref": 12586 + }, + "3": { + "Dice": 0.8940769047050394, + "FN": 1259, + "FP": 515, + "IoU": 0.8084440125256451, + "TN": 842707, + "TP": 7487, + "n_pred": 8002, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42870647550023633, + "FN": 7646, + "FP": 6858, + "IoU": 0.272836658979244, + "TN": 777094, + "TP": 5442, + "n_pred": 12300, + "n_ref": 13088 + }, + "2": { + "Dice": 0.6776569624693091, + "FN": 3058, + "FP": 2456, + "IoU": 0.5124668435013262, + "TN": 785730, + "TP": 5796, + "n_pred": 8252, + "n_ref": 8854 + }, + "3": { + "Dice": 0.8933804131661187, + "FN": 2452, + "FP": 175, + "IoU": 0.8073058020978509, + "TN": 783407, + "TP": 11006, + "n_pred": 11181, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3909110035766884, + "FN": 3952, + "FP": 7628, + "IoU": 0.24293933054393305, + "TN": 781744, + "TP": 3716, + "n_pred": 11344, + "n_ref": 7668 + }, + "2": { + "Dice": 0.6899715463678068, + "FN": 3681, + "FP": 1658, + "IoU": 0.5266843971631205, + "TN": 785760, + "TP": 5941, + "n_pred": 7599, + "n_ref": 9622 + }, + "3": { + "Dice": 0.8988817511301451, + "FN": 1476, + "FP": 224, + "IoU": 0.8163353500432152, + "TN": 787784, + "TP": 7556, + "n_pred": 7780, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5663019048671751, + "FN": 4783, + "FP": 6988, + "IoU": 0.3949938322368421, + "TN": 877214, + "TP": 7685, + "n_pred": 14673, + "n_ref": 12468 + }, + "2": { + "Dice": 0.6124684529882404, + "FN": 4635, + "FP": 2582, + "IoU": 0.44140866873065016, + "TN": 883750, + "TP": 5703, + "n_pred": 8285, + "n_ref": 10338 + }, + "3": { + "Dice": 0.8176010792365989, + "FN": 1949, + "FP": 2648, + "IoU": 0.6914765100671141, + "TN": 881770, + "TP": 10303, + "n_pred": 12951, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4451251716488856, + "FN": 2142, + "FP": 8364, + "IoU": 0.28627717391304347, + "TN": 881950, + "TP": 4214, + "n_pred": 12578, + "n_ref": 6356 + }, + "2": { + "Dice": 0.5599546928898729, + "FN": 6080, + "FP": 2467, + "IoU": 0.3888451912763675, + "TN": 882685, + "TP": 5438, + "n_pred": 7905, + "n_ref": 11518 + }, + "3": { + "Dice": 0.7497771017989197, + "FN": 1678, + "FP": 3093, + "IoU": 0.5997147411695612, + "TN": 884751, + "TP": 7148, + "n_pred": 10241, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.597085435182961, + "FN": 3763, + "FP": 6301, + "IoU": 0.42560356144055705, + "TN": 744527, + "TP": 7457, + "n_pred": 13758, + "n_ref": 11220 + }, + "2": { + "Dice": 0.7659251769464105, + "FN": 2837, + "FP": 1793, + "IoU": 0.6206472757066775, + "TN": 749843, + "TP": 7575, + "n_pred": 9368, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9406107642989708, + "FN": 602, + "FP": 806, + "IoU": 0.8878802357063227, + "TN": 749490, + "TP": 11150, + "n_pred": 11956, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3654924175370272, + "FN": 695, + "FP": 10058, + "IoU": 0.2236101083032491, + "TN": 748198, + "TP": 3097, + "n_pred": 13155, + "n_ref": 3792 + }, + "2": { + "Dice": 0.5861652397709963, + "FN": 6052, + "FP": 1827, + "IoU": 0.41459246600787575, + "TN": 748589, + "TP": 5580, + "n_pred": 7407, + "n_ref": 11632 + }, + "3": { + "Dice": 0.8799940480619002, + "FN": 920, + "FP": 693, + "IoU": 0.7857047960674903, + "TN": 754521, + "TP": 5914, + "n_pred": 6607, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6213449524909445, + "FN": 2024, + "FP": 5189, + "IoU": 0.45068920874267004, + "TN": 982197, + "TP": 5918, + "n_pred": 11107, + "n_ref": 7942 + }, + "2": { + "Dice": 0.7286670863618153, + "FN": 2382, + "FP": 2359, + "IoU": 0.5731520662645179, + "TN": 984221, + "TP": 6366, + "n_pred": 8725, + "n_ref": 8748 + }, + "3": { + "Dice": 0.8960437579637629, + "FN": 2130, + "FP": 1215, + "IoU": 0.8116660097967456, + "TN": 977567, + "TP": 14416, + "n_pred": 15631, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.43353103993673386, + "FN": 501, + "FP": 6662, + "IoU": 0.2767568659127625, + "TN": 985424, + "TP": 2741, + "n_pred": 9403, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7258231042789951, + "FN": 2007, + "FP": 2773, + "IoU": 0.569640767083821, + "TN": 984221, + "TP": 6327, + "n_pred": 9100, + "n_ref": 8334 + }, + "3": { + "Dice": 0.892712359762421, + "FN": 1145, + "FP": 1131, + "IoU": 0.806215410813112, + "TN": 983583, + "TP": 9469, + "n_pred": 10600, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7320356264861162, + "FN": 5242, + "FP": 1407, + "IoU": 0.5773313838916788, + "TN": 742285, + "TP": 9082, + "n_pred": 10489, + "n_ref": 14324 + }, + "2": { + "Dice": 0.76247407588142, + "FN": 2562, + "FP": 1332, + "IoU": 0.6161277602523659, + "TN": 747872, + "TP": 6250, + "n_pred": 7582, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9203563837004206, + "FN": 1127, + "FP": 634, + "IoU": 0.8524631367292225, + "TN": 746080, + "TP": 10175, + "n_pred": 10809, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6915901366693181, + "FN": 454, + "FP": 3811, + "IoU": 0.5285730076268377, + "TN": 748969, + "TP": 4782, + "n_pred": 8593, + "n_ref": 5236 + }, + "2": { + "Dice": 0.7450889761959787, + "FN": 2884, + "FP": 1528, + "IoU": 0.5937384898710866, + "TN": 747156, + "TP": 6448, + "n_pred": 7976, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8192538593481989, + "FN": 371, + "FP": 1315, + "IoU": 0.6938441982930815, + "TN": 752509, + "TP": 3821, + "n_pred": 5136, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7109779031499764, + "FN": 1897, + "FP": 3021, + "IoU": 0.5515637822558584, + "TN": 628009, + "TP": 6049, + "n_pred": 9070, + "n_ref": 7946 + }, + "2": { + "Dice": 0.731328320802005, + "FN": 989, + "FP": 2227, + "IoU": 0.576451995258791, + "TN": 631383, + "TP": 4377, + "n_pred": 6604, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9484723484583654, + "FN": 551, + "FP": 186, + "IoU": 0.9019946808510638, + "TN": 631456, + "TP": 6783, + "n_pred": 6969, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.46899391028390086, + "FN": 286, + "FP": 5905, + "IoU": 0.30633053221288514, + "TN": 630051, + "TP": 2734, + "n_pred": 8639, + "n_ref": 3020 + }, + "2": { + "Dice": 0.73512252042007, + "FN": 1997, + "FP": 1862, + "IoU": 0.5811808118081181, + "TN": 629762, + "TP": 5355, + "n_pred": 7217, + "n_ref": 7352 + }, + "3": { + "Dice": 0.8860585197934595, + "FN": 182, + "FP": 480, + "IoU": 0.7954264524103832, + "TN": 635740, + "TP": 2574, + "n_pred": 3054, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5632065016623569, + "FN": 7817, + "FP": 4007, + "IoU": 0.3919884815138582, + "TN": 963593, + "TP": 7623, + "n_pred": 11630, + "n_ref": 15440 + }, + "2": { + "Dice": 0.7542304593070105, + "FN": 2876, + "FP": 1699, + "IoU": 0.6054333764553687, + "TN": 971445, + "TP": 7020, + "n_pred": 8719, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9348991767993354, + "FN": 839, + "FP": 885, + "IoU": 0.8777565057080053, + "TN": 968937, + "TP": 12379, + "n_pred": 13264, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5517052082618541, + "FN": 2168, + "FP": 4365, + "IoU": 0.3809343314697243, + "TN": 972487, + "TP": 4020, + "n_pred": 8385, + "n_ref": 6188 + }, + "2": { + "Dice": 0.5451774173881234, + "FN": 5485, + "FP": 1975, + "IoU": 0.37473807727768, + "TN": 971109, + "TP": 4471, + "n_pred": 6446, + "n_ref": 9956 + }, + "3": { + "Dice": 0.7326948193295603, + "FN": 941, + "FP": 2743, + "IoU": 0.5781518378564068, + "TN": 974307, + "TP": 5049, + "n_pred": 7792, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6796773532025429, + "FN": 6237, + "FP": 3135, + "IoU": 0.5147812580895677, + "TN": 1029261, + "TP": 9943, + "n_pred": 13078, + "n_ref": 16180 + }, + "2": { + "Dice": 0.6848095002474023, + "FN": 2480, + "FP": 3253, + "IoU": 0.5206922498118887, + "TN": 1036615, + "TP": 6228, + "n_pred": 9481, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9107214670634601, + "FN": 937, + "FP": 1283, + "IoU": 0.836077678505501, + "TN": 1035033, + "TP": 11323, + "n_pred": 12606, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5213398481191499, + "FN": 1002, + "FP": 7129, + "IoU": 0.35257584202563896, + "TN": 1036017, + "TP": 4428, + "n_pred": 11557, + "n_ref": 5430 + }, + "2": { + "Dice": 0.6082822085889571, + "FN": 4373, + "FP": 3289, + "IoU": 0.4370729556975975, + "TN": 1034965, + "TP": 5949, + "n_pred": 9238, + "n_ref": 10322 + }, + "3": { + "Dice": 0.8415555348316702, + "FN": 568, + "FP": 1131, + "IoU": 0.7264530671389471, + "TN": 1042365, + "TP": 4512, + "n_pred": 5643, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.22879330943847073, + "FN": 8864, + "FP": 6628, + "IoU": 0.12917369308600338, + "TN": 471426, + "TP": 2298, + "n_pred": 8926, + "n_ref": 11162 + }, + "2": { + "Dice": 0.462223291626564, + "FN": 796, + "FP": 3674, + "IoU": 0.300578939133156, + "TN": 482825, + "TP": 1921, + "n_pred": 5595, + "n_ref": 2717 + }, + "3": { + "Dice": 0.8489513180681162, + "FN": 239, + "FP": 1331, + "IoU": 0.7375459712470745, + "TN": 483234, + "TP": 4412, + "n_pred": 5743, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3542512773483558, + "FN": 3947, + "FP": 5911, + "IoU": 0.21525234835217322, + "TN": 476654, + "TP": 2704, + "n_pred": 8615, + "n_ref": 6651 + }, + "2": { + "Dice": 0.6007786010297627, + "FN": 968, + "FP": 2211, + "IoU": 0.42936636151498836, + "TN": 483645, + "TP": 2392, + "n_pred": 4603, + "n_ref": 3360 + }, + "3": { + "Dice": 0.6377880184331797, + "FN": 60, + "FP": 1905, + "IoU": 0.46820027063599456, + "TN": 485521, + "TP": 1730, + "n_pred": 3635, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.600515813764083, + "FN": 7028, + "FP": 4744, + "IoU": 0.42909796314258003, + "TN": 459860, + "TP": 8848, + "n_pred": 13592, + "n_ref": 15876 + }, + "2": { + "Dice": 0.633348815606131, + "FN": 1110, + "FP": 2837, + "IoU": 0.4634312126155519, + "TN": 473124, + "TP": 3409, + "n_pred": 6246, + "n_ref": 4519 + }, + "3": { + "Dice": 0.8999359020012819, + "FN": 642, + "FP": 763, + "IoU": 0.8180758772497734, + "TN": 472757, + "TP": 6318, + "n_pred": 7081, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5782201503506783, + "FN": 4727, + "FP": 5316, + "IoU": 0.40668754061558454, + "TN": 463553, + "TP": 6884, + "n_pred": 12200, + "n_ref": 11611 + }, + "2": { + "Dice": 0.5948849104859335, + "FN": 2173, + "FP": 2579, + "IoU": 0.4233709501274117, + "TN": 472239, + "TP": 3489, + "n_pred": 6068, + "n_ref": 5662 + }, + "3": { + "Dice": 0.6960731576116191, + "FN": 218, + "FP": 2042, + "IoU": 0.5338283828382838, + "TN": 475632, + "TP": 2588, + "n_pred": 4630, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6467413864674139, + "FN": 9766, + "FP": 2148, + "IoU": 0.47791411042944787, + "TN": 621820, + "TP": 10906, + "n_pred": 13054, + "n_ref": 20672 + }, + "2": { + "Dice": 0.6373465480346886, + "FN": 3407, + "FP": 3033, + "IoU": 0.4677246053392842, + "TN": 632541, + "TP": 5659, + "n_pred": 8692, + "n_ref": 9066 + }, + "3": { + "Dice": 0.8708818503358106, + "FN": 3041, + "FP": 208, + "IoU": 0.7712938195128819, + "TN": 630434, + "TP": 10957, + "n_pred": 11165, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7027367536921677, + "FN": 5292, + "FP": 3202, + "IoU": 0.5417071328369483, + "TN": 626106, + "TP": 10040, + "n_pred": 13242, + "n_ref": 15332 + }, + "2": { + "Dice": 0.6435648543982296, + "FN": 5768, + "FP": 1319, + "IoU": 0.47445309603262886, + "TN": 631155, + "TP": 6398, + "n_pred": 7717, + "n_ref": 12166 + }, + "3": { + "Dice": 0.8591693377889927, + "FN": 1263, + "FP": 802, + "IoU": 0.7531085604973696, + "TN": 636276, + "TP": 6299, + "n_pred": 7101, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5068011938406276, + "FN": 12458, + "FP": 6215, + "IoU": 0.339406374924824, + "TN": 536213, + "TP": 9594, + "n_pred": 15809, + "n_ref": 22052 + }, + "2": { + "Dice": 0.564799294221438, + "FN": 1268, + "FP": 3665, + "IoU": 0.39353331694123433, + "TN": 556346, + "TP": 3201, + "n_pred": 6866, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9018639674114307, + "FN": 591, + "FP": 999, + "IoU": 0.8212679856115108, + "TN": 555584, + "TP": 7306, + "n_pred": 8305, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4873172659028052, + "FN": 2265, + "FP": 10711, + "IoU": 0.32215431228125163, + "TN": 545337, + "TP": 6167, + "n_pred": 16878, + "n_ref": 8432 + }, + "2": { + "Dice": 0.5911253351786178, + "FN": 1446, + "FP": 3281, + "IoU": 0.4195726915520629, + "TN": 556336, + "TP": 3417, + "n_pred": 6698, + "n_ref": 4863 + }, + "3": { + "Dice": 0.7672971323978035, + "FN": 308, + "FP": 1599, + "IoU": 0.6224509998020195, + "TN": 559429, + "TP": 3144, + "n_pred": 4743, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.26332005711279777, + "FN": 5823, + "FP": 3980, + "IoU": 0.15162267416702727, + "TN": 407325, + "TP": 1752, + "n_pred": 5732, + "n_ref": 7575 + }, + "2": { + "Dice": 0.14205360097055256, + "FN": 2212, + "FP": 5567, + "IoU": 0.07645731924492462, + "TN": 410457, + "TP": 644, + "n_pred": 6211, + "n_ref": 2856 + }, + "3": { + "Dice": 0.5298701298701298, + "FN": 2057, + "FP": 1744, + "IoU": 0.36042402826855124, + "TN": 412937, + "TP": 2142, + "n_pred": 3886, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.23253071253071253, + "FN": 3554, + "FP": 4255, + "IoU": 0.13156138790035588, + "TN": 409888, + "TP": 1183, + "n_pred": 5438, + "n_ref": 4737 + }, + "2": { + "Dice": 0.13517933064428214, + "FN": 2373, + "FP": 5560, + "IoU": 0.07248918508125804, + "TN": 410327, + "TP": 620, + "n_pred": 6180, + "n_ref": 2993 + }, + "3": { + "Dice": 0.4267769607843137, + "FN": 990, + "FP": 2752, + "IoU": 0.2712755598831548, + "TN": 413745, + "TP": 1393, + "n_pred": 4145, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6984342546732705, + "FN": 4823, + "FP": 2727, + "IoU": 0.5366108144601976, + "TN": 480217, + "TP": 8743, + "n_pred": 11470, + "n_ref": 13566 + }, + "2": { + "Dice": 0.5821553027812479, + "FN": 3245, + "FP": 3110, + "IoU": 0.41059172695232793, + "TN": 485728, + "TP": 4427, + "n_pred": 7537, + "n_ref": 7672 + }, + "3": { + "Dice": 0.8803844372394627, + "FN": 169, + "FP": 1897, + "IoU": 0.7863274382045713, + "TN": 486841, + "TP": 7603, + "n_pred": 9500, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.394802686449234, + "FN": 8765, + "FP": 5022, + "IoU": 0.24595274556989719, + "TN": 478226, + "TP": 4497, + "n_pred": 9519, + "n_ref": 13262 + }, + "2": { + "Dice": 0.38703980437440566, + "FN": 5627, + "FP": 3397, + "IoU": 0.2399562031500042, + "TN": 484637, + "TP": 2849, + "n_pred": 6246, + "n_ref": 8476 + }, + "3": { + "Dice": 0.5755435281166865, + "FN": 263, + "FP": 4364, + "IoU": 0.4040443070582174, + "TN": 488746, + "TP": 3137, + "n_pred": 7501, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_001/summary_cross_val.json b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_001/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..b296419dcdb9d99e794fe914ec06b67a9868d3ca --- /dev/null +++ b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_001/summary_cross_val.json @@ -0,0 +1,1968 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.5186025775361397, + "FN": 32.81481481481482, + "FP": 21.888888888888886, + "IoU": 0.427410920784149, + "TN": 930.9629629629629, + "TP": 81.0, + "n_pred": 102.88888888888887, + "n_ref": 113.81481481481482 + }, + "mean": { + "1": { + "Dice": 0.5194397214237148, + "FN": 63.111111111111114, + "FP": 23.444444444444443, + "IoU": 0.3970221697494425, + "TN": 888.6666666666666, + "TP": 91.44444444444444, + "n_pred": 114.88888888888889, + "n_ref": 154.55555555555554 + }, + "2": { + "Dice": 0.49798712001512524, + "FN": 20.11111111111111, + "FP": 30.444444444444443, + "IoU": 0.40098420443611654, + "TN": 969.5555555555555, + "TP": 46.55555555555556, + "n_pred": 77.0, + "n_ref": 66.66666666666667 + }, + "3": { + "Dice": 0.5383808911695793, + "FN": 15.222222222222221, + "FP": 11.777777777777779, + "IoU": 0.48422638816688807, + "TN": 934.6666666666666, + "TP": 105.0, + "n_pred": 116.77777777777777, + "n_ref": 120.22222222222223 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7050359712230215, + "FN": 41, + "FP": 0, + "IoU": 0.5444444444444444, + "TN": 710, + "TP": 49, + "n_pred": 49, + "n_ref": 90 + }, + "3": { + "Dice": 0.9894736842105263, + "FN": 5, + "FP": 10, + "IoU": 0.9791666666666666, + "TN": 80, + "TP": 705, + "n_pred": 715, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5547445255474452, + "FN": 354, + "FP": 12, + "IoU": 0.3838383838383838, + "TN": 206, + "TP": 228, + "n_pred": 240, + "n_ref": 582 + }, + "2": { + "Dice": 0.9261083743842364, + "FN": 22, + "FP": 8, + "IoU": 0.8623853211009175, + "TN": 582, + "TP": 188, + "n_pred": 196, + "n_ref": 210 + }, + "3": { + "Dice": 0.0, + "FN": 8, + "FP": 0, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 0, + "n_ref": 8 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6666666666666666, + "FN": 93, + "FP": 6, + "IoU": 0.5, + "TN": 602, + "TP": 99, + "n_pred": 105, + "n_ref": 192 + }, + "2": { + "Dice": 0.6500956022944551, + "FN": 40, + "FP": 143, + "IoU": 0.48158640226628896, + "TN": 447, + "TP": 170, + "n_pred": 313, + "n_ref": 210 + }, + "3": { + "Dice": 0.8869936034115139, + "FN": 10, + "FP": 43, + "IoU": 0.7969348659003831, + "TN": 539, + "TP": 208, + "n_pred": 251, + "n_ref": 218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.046511627906976744, + "FN": 81, + "FP": 1, + "IoU": 0.023809523809523808, + "TN": 1516, + "TP": 2, + "n_pred": 3, + "n_ref": 83 + }, + "2": { + "Dice": 0.20869565217391303, + "FN": 78, + "FP": 13, + "IoU": 0.11650485436893204, + "TN": 1497, + "TP": 12, + "n_pred": 25, + "n_ref": 90 + }, + "3": { + "Dice": 0.27705627705627706, + "FN": 114, + "FP": 53, + "IoU": 0.16080402010050251, + "TN": 1401, + "TP": 32, + "n_pred": 85, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8098360655737705, + "FN": 40, + "FP": 192, + "IoU": 0.6804407713498623, + "TN": 874, + "TP": 494, + "n_pred": 686, + "n_ref": 534 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 110, + "IoU": 0.0, + "TN": 1490, + "TP": 0, + "n_pred": 110, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.6281172875054031, + "FN": 31.740740740740737, + "FP": 1.5555555555555556, + "IoU": 0.5696429954271435, + "TN": 782.2222222222223, + "TP": 73.37037037037037, + "n_pred": 74.92592592592592, + "n_ref": 105.1111111111111 + }, + "mean": { + "1": { + "Dice": 0.5420102738565026, + "FN": 80.55555555555556, + "FP": 1.2222222222222223, + "IoU": 0.4730319387602776, + "TN": 683.4444444444445, + "TP": 123.66666666666667, + "n_pred": 124.88888888888889, + "n_ref": 204.22222222222223 + }, + "2": { + "Dice": 0.8581997976149305, + "FN": 12.88888888888889, + "FP": 1.1111111111111112, + "IoU": 0.7666384580093988, + "TN": 836.1111111111111, + "TP": 38.77777777777778, + "n_pred": 39.888888888888886, + "n_ref": 51.666666666666664 + }, + "3": { + "Dice": 0.4841417910447761, + "FN": 1.7777777777777777, + "FP": 2.3333333333333335, + "IoU": 0.4692585895117541, + "TN": 827.1111111111111, + "TP": 57.666666666666664, + "n_pred": 60.0, + "n_ref": 59.44444444444444 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7503566333808844, + "FN": 175, + "FP": 0, + "IoU": 0.6004566210045662, + "TN": 362, + "TP": 263, + "n_pred": 263, + "n_ref": 438 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8148148148148148, + "FN": 3, + "FP": 2, + "IoU": 0.6875, + "TN": 784, + "TP": 11, + "n_pred": 13, + "n_ref": 14 + }, + "2": { + "Dice": 0.9368635437881874, + "FN": 21, + "FP": 10, + "IoU": 0.8812260536398467, + "TN": 539, + "TP": 230, + "n_pred": 240, + "n_ref": 251 + }, + "3": { + "Dice": 0.9682835820895522, + "FN": 16, + "FP": 18, + "IoU": 0.9385171790235082, + "TN": 247, + "TP": 519, + "n_pred": 537, + "n_ref": 535 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.14551083591331268, + "FN": 547, + "FP": 5, + "IoU": 0.07846410684474124, + "TN": 1001, + "TP": 47, + "n_pred": 52, + "n_ref": 594 + }, + "2": { + "Dice": 0.7044025157232704, + "FN": 94, + "FP": 0, + "IoU": 0.5436893203883495, + "TN": 1394, + "TP": 112, + "n_pred": 112, + "n_ref": 206 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 1597, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9993690851735015, + "FN": 0, + "FP": 1, + "IoU": 0.9987389659520807, + "TN": 7, + "TP": 792, + "n_pred": 793, + "n_ref": 792 + }, + "2": { + "Dice": 0.9333333333333333, + "FN": 1, + "FP": 0, + "IoU": 0.875, + "TN": 792, + "TP": 7, + "n_pred": 7, + "n_ref": 8 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.4497574351889182, + "FN": 71.13333333333334, + "FP": 51.166666666666664, + "IoU": 0.3666228443026723, + "TN": 949.5333333333333, + "TP": 48.166666666666664, + "n_pred": 99.33333333333333, + "n_ref": 119.3 + }, + "mean": { + "1": { + "Dice": 0.2528314421365949, + "FN": 74.5, + "FP": 126.0, + "IoU": 0.21597858988556662, + "TN": 855.0, + "TP": 64.5, + "n_pred": 190.5, + "n_ref": 139.0 + }, + "2": { + "Dice": 0.4334422362711952, + "FN": 26.0, + "FP": 27.1, + "IoU": 0.3464964593131771, + "TN": 1031.1, + "TP": 35.8, + "n_pred": 62.9, + "n_ref": 61.8 + }, + "3": { + "Dice": 0.6629986271589646, + "FN": 112.9, + "FP": 0.4, + "IoU": 0.5373934837092732, + "TN": 962.5, + "TP": 44.2, + "n_pred": 44.6, + "n_ref": 157.1 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.17452830188679244, + "FN": 700, + "FP": 0, + "IoU": 0.09560723514211886, + "TN": 26, + "TP": 74, + "n_pred": 74, + "n_ref": 774 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9535941765241128, + "FN": 0, + "FP": 51, + "IoU": 0.9113043478260869, + "TN": 225, + "TP": 524, + "n_pred": 575, + "n_ref": 524 + }, + "2": { + "Dice": 0.8401084010840109, + "FN": 53, + "FP": 6, + "IoU": 0.7242990654205608, + "TN": 586, + "TP": 155, + "n_pred": 161, + "n_ref": 208 + }, + "3": { + "Dice": 0.8135593220338984, + "FN": 20, + "FP": 2, + "IoU": 0.6857142857142857, + "TN": 730, + "TP": 48, + "n_pred": 50, + "n_ref": 68 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 1572, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + }, + "2": { + "Dice": 0.16714697406340057, + "FN": 131, + "FP": 158, + "IoU": 0.09119496855345911, + "TN": 1282, + "TP": 29, + "n_pred": 187, + "n_ref": 160 + }, + "3": { + "Dice": 0.3343769567939887, + "FN": 1063, + "FP": 0, + "IoU": 0.20075187969924813, + "TN": 270, + "TP": 267, + "n_pred": 267, + "n_ref": 1330 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.13603473227206947, + "FN": 45, + "FP": 552, + "IoU": 0.07298136645962733, + "TN": 956, + "TP": 47, + "n_pred": 599, + "n_ref": 92 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 629, + "IoU": 0.0, + "TN": 171, + "TP": 0, + "n_pred": 629, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 52, + "IoU": 0.0, + "TN": 748, + "TP": 0, + "n_pred": 52, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7265135699373695, + "FN": 76, + "FP": 55, + "IoU": 0.5704918032786885, + "TN": 495, + "TP": 174, + "n_pred": 229, + "n_ref": 250 + }, + "3": { + "Dice": 0.8410596026490066, + "FN": 46, + "FP": 2, + "IoU": 0.7257142857142858, + "TN": 625, + "TP": 127, + "n_pred": 129, + "n_ref": 173 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.47222397826287876, + "FN": 5.533333333333334, + "FP": 14.1, + "IoU": 0.4369816991038496, + "TN": 958.6999999999999, + "TP": 61.666666666666664, + "n_pred": 75.76666666666667, + "n_ref": 67.2 + }, + "mean": { + "1": { + "Dice": 0.3165401426270991, + "FN": 7.2, + "FP": 22.7, + "IoU": 0.30135786246167323, + "TN": 941.3, + "TP": 68.8, + "n_pred": 91.5, + "n_ref": 76.0 + }, + "2": { + "Dice": 0.15669515669515668, + "FN": 6.6, + "FP": 13.7, + "IoU": 0.11410788381742738, + "TN": 1008.7, + "TP": 11.0, + "n_pred": 24.7, + "n_ref": 17.6 + }, + "3": { + "Dice": 0.9434366354663806, + "FN": 2.8, + "FP": 5.9, + "IoU": 0.8954793510324484, + "TN": 926.1, + "TP": 105.2, + "n_pred": 111.1, + "n_ref": 108.0 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 225, + "IoU": 0.0, + "TN": 575, + "TP": 0, + "n_pred": 225, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 793, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 795, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + }, + "3": { + "Dice": 0.9821882951653944, + "FN": 28, + "FP": 0, + "IoU": 0.965, + "TN": 0, + "TP": 772, + "n_pred": 772, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6267806267806267, + "FN": 66, + "FP": 65, + "IoU": 0.45643153526970953, + "TN": 559, + "TP": 110, + "n_pred": 175, + "n_ref": 176 + }, + "3": { + "Dice": 0.9046849757673667, + "FN": 0, + "FP": 59, + "IoU": 0.8259587020648967, + "TN": 461, + "TP": 280, + "n_pred": 339, + "n_ref": 280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9496204278812974, + "FN": 72, + "FP": 1, + "IoU": 0.9040735873850198, + "TN": 39, + "TP": 688, + "n_pred": 689, + "n_ref": 760 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 60, + "IoU": 0.0, + "TN": 740, + "TP": 0, + "n_pred": 60, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame12.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.08716377916661737, + "FN": 54.888888888888886, + "FP": 23.666666666666668, + "IoU": 0.062002185176229185, + "TN": 891.2962962962962, + "TP": 7.9259259259259265, + "n_pred": 31.59259259259259, + "n_ref": 62.81481481481481 + }, + "mean": { + "1": { + "Dice": 0.0, + "FN": 1.3333333333333333, + "FP": 19.333333333333332, + "IoU": 0.0, + "TN": 957.1111111111111, + "TP": 0.0, + "n_pred": 19.333333333333332, + "n_ref": 1.3333333333333333 + }, + "2": { + "Dice": 0.13821943435677342, + "FN": 74.33333333333333, + "FP": 9.444444444444445, + "IoU": 0.10932890855457228, + "TN": 891.0, + "TP": 3.0, + "n_pred": 12.444444444444445, + "n_ref": 77.33333333333333 + }, + "3": { + "Dice": 0.12327190314307868, + "FN": 89.0, + "FP": 42.22222222222222, + "IoU": 0.07667764697411528, + "TN": 825.7777777777778, + "TP": 20.77777777777778, + "n_pred": 63.0, + "n_ref": 109.77777777777777 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.060085836909871244, + "FN": 219, + "FP": 0, + "IoU": 0.030973451327433628, + "TN": 1374, + "TP": 7, + "n_pred": 7, + "n_ref": 226 + }, + "3": { + "Dice": 0.45267489711934156, + "FN": 133, + "FP": 0, + "IoU": 0.2925531914893617, + "TN": 1412, + "TP": 55, + "n_pred": 55, + "n_ref": 188 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 27, + "IoU": 0.0, + "TN": 1573, + "TP": 0, + "n_pred": 27, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 17, + "IoU": 0.0, + "TN": 1583, + "TP": 0, + "n_pred": 17, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 12, + "FP": 46, + "IoU": 0.0, + "TN": 742, + "TP": 0, + "n_pred": 46, + "n_ref": 12 + }, + "3": { + "Dice": 0.28695652173913044, + "FN": 656, + "FP": 0, + "IoU": 0.16751269035532995, + "TN": 12, + "TP": 132, + "n_pred": 132, + "n_ref": 788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 12, + "FP": 0, + "IoU": 0.0, + "TN": 788, + "TP": 0, + "n_pred": 0, + "n_ref": 12 + }, + "2": { + "Dice": 0.0, + "FN": 432, + "FP": 0, + "IoU": 0.0, + "TN": 368, + "TP": 0, + "n_pred": 0, + "n_ref": 432 + }, + "3": { + "Dice": 0.0, + "FN": 12, + "FP": 0, + "IoU": 0.0, + "TN": 788, + "TP": 0, + "n_pred": 0, + "n_ref": 12 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 349, + "IoU": 0.0, + "TN": 451, + "TP": 0, + "n_pred": 349, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 174, + "IoU": 0.0, + "TN": 626, + "TP": 0, + "n_pred": 174, + "n_ref": 0 + }, + "2": { + "Dice": 0.7692307692307693, + "FN": 6, + "FP": 6, + "IoU": 0.625, + "TN": 768, + "TP": 20, + "n_pred": 26, + "n_ref": 26 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 14, + "IoU": 0.0, + "TN": 786, + "TP": 0, + "n_pred": 14, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854399/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.43117301153199145, + "FN": 39.22222222222222, + "FP": 22.475555555555555, + "IoU": 0.3725321289588087, + "TN": 902.5429629629629, + "TP": 54.425925925925924, + "n_pred": 76.90148148148147, + "n_ref": 93.64814814814815 + }, + "mean": { + "1": { + "Dice": 0.32616431600878226, + "FN": 45.34, + "FP": 38.54, + "IoU": 0.277478112171392, + "TN": 865.1044444444445, + "TP": 69.68222222222222, + "n_pred": 108.22222222222224, + "n_ref": 115.02222222222224 + }, + "2": { + "Dice": 0.4169087489906362, + "FN": 27.986666666666668, + "FP": 16.36, + "IoU": 0.34751118282613846, + "TN": 947.2933333333333, + "TP": 27.026666666666664, + "n_pred": 43.38666666666667, + "n_ref": 55.013333333333335 + }, + "3": { + "Dice": 0.5504459695965558, + "FN": 44.34, + "FP": 12.526666666666667, + "IoU": 0.4926070918788958, + "TN": 895.231111111111, + "TP": 66.56888888888889, + "n_pred": 79.09555555555555, + "n_ref": 110.9088888888889 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_002/summary.json b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_002/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..ffd07fcca40946bef64b750f392ed63a6ba8a56d --- /dev/null +++ b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_002/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.7105770750542334, + "FN": 3020.3666666666663, + "FP": 1961.24, + "IoU": 0.5824525269690081, + "TN": 842273.2866666667, + "TP": 7173.746666666666, + "n_pred": 9134.986666666666, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.5884152815215962, + "FN": 4030.14, + "FP": 2792.72, + "IoU": 0.4453922653439178, + "TN": 841781.86, + "TP": 5823.92, + "n_pred": 8616.64, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.6730215055425949, + "FN": 3558.5, + "FP": 2199.88, + "IoU": 0.5245143653330624, + "TN": 842173.26, + "TP": 6497.0, + "n_pred": 8696.88, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8702944380985095, + "FN": 1472.46, + "FP": 891.12, + "IoU": 0.777450950230044, + "TN": 842864.74, + "TP": 9200.32, + "n_pred": 10091.44, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7830117131541249, + "FN": 2154, + "FP": 2996, + "IoU": 0.6434011909707796, + "TN": 1091478, + "TP": 9292, + "n_pred": 12288, + "n_ref": 11446 + }, + "2": { + "Dice": 0.7416545146415481, + "FN": 4047, + "FP": 2508, + "IoU": 0.589388624404911, + "TN": 1089956, + "TP": 9409, + "n_pred": 11917, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9191966753331832, + "FN": 1758, + "FP": 2189, + "IoU": 0.8504754328143349, + "TN": 1079523, + "TP": 22450, + "n_pred": 24639, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6826153959051883, + "FN": 227, + "FP": 4098, + "IoU": 0.5181595365418895, + "TN": 1096944, + "TP": 4651, + "n_pred": 8749, + "n_ref": 4878 + }, + "2": { + "Dice": 0.7796435207487441, + "FN": 4651, + "FP": 1753, + "IoU": 0.6388653922066204, + "TN": 1088187, + "TP": 11329, + "n_pred": 13082, + "n_ref": 15980 + }, + "3": { + "Dice": 0.8916425276257912, + "FN": 1860, + "FP": 2180, + "IoU": 0.8044719775433162, + "TN": 1085258, + "TP": 16622, + "n_pred": 18802, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2659194395796848, + "FN": 6972, + "FP": 3507, + "IoU": 0.1533489537044518, + "TN": 897063, + "TP": 1898, + "n_pred": 5405, + "n_ref": 8870 + }, + "2": { + "Dice": 0.5870390684330437, + "FN": 6829, + "FP": 2959, + "IoU": 0.41546730367273815, + "TN": 892695, + "TP": 6957, + "n_pred": 9916, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9157063381680906, + "FN": 2977, + "FP": 417, + "IoU": 0.8445187594484401, + "TN": 887611, + "TP": 18435, + "n_pred": 18852, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.10430161102806842, + "FN": 6350, + "FP": 4436, + "IoU": 0.055020150692132466, + "TN": 898026, + "TP": 628, + "n_pred": 5064, + "n_ref": 6978 + }, + "2": { + "Dice": 0.5499510284035259, + "FN": 7586, + "FP": 3442, + "IoU": 0.37926376224248565, + "TN": 891674, + "TP": 6738, + "n_pred": 10180, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9110879870505261, + "FN": 2874, + "FP": 202, + "IoU": 0.8366956891059673, + "TN": 890604, + "TP": 15760, + "n_pred": 15962, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6524762460852487, + "FN": 11886, + "FP": 1208, + "IoU": 0.48420389190892615, + "TN": 1400374, + "TP": 12292, + "n_pred": 13500, + "n_ref": 24178 + }, + "2": { + "Dice": 0.5454181031027019, + "FN": 8281, + "FP": 3059, + "IoU": 0.3749655514523508, + "TN": 1407617, + "TP": 6803, + "n_pred": 9862, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9021302207605167, + "FN": 4292, + "FP": 261, + "IoU": 0.8217096761561655, + "TN": 1400223, + "TP": 20984, + "n_pred": 21245, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7024295562546015, + "FN": 7055, + "FP": 1837, + "IoU": 0.5413421364832104, + "TN": 1406373, + "TP": 10495, + "n_pred": 12332, + "n_ref": 17550 + }, + "2": { + "Dice": 0.5180547701752969, + "FN": 8655, + "FP": 3277, + "IoU": 0.34957754156445897, + "TN": 1407415, + "TP": 6413, + "n_pred": 9690, + "n_ref": 15068 + }, + "3": { + "Dice": 0.8678695727297411, + "FN": 5120, + "FP": 233, + "IoU": 0.7665809096062443, + "TN": 1402827, + "TP": 17580, + "n_pred": 17813, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.30016638935108153, + "FN": 7003, + "FP": 3512, + "IoU": 0.17658574784651526, + "TN": 749278, + "TP": 2255, + "n_pred": 5767, + "n_ref": 9258 + }, + "2": { + "Dice": 0.6026761819803746, + "FN": 4343, + "FP": 2338, + "IoU": 0.43130745658835545, + "TN": 750300, + "TP": 5067, + "n_pred": 7405, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9091309823677581, + "FN": 1579, + "FP": 1307, + "IoU": 0.8334006811753161, + "TN": 744725, + "TP": 14437, + "n_pred": 15744, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.26136058080129065, + "FN": 3460, + "FP": 4781, + "IoU": 0.15032477575007733, + "TN": 752349, + "TP": 1458, + "n_pred": 6239, + "n_ref": 4918 + }, + "2": { + "Dice": 0.6376024590163935, + "FN": 5015, + "FP": 2059, + "IoU": 0.46800030081973376, + "TN": 748751, + "TP": 6223, + "n_pred": 8282, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9176397183349675, + "FN": 1617, + "FP": 231, + "IoU": 0.8478135551346455, + "TN": 749905, + "TP": 10295, + "n_pred": 10526, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.05038560411311054, + "FN": 13452, + "FP": 1324, + "IoU": 0.025843881856540084, + "TN": 1063104, + "TP": 392, + "n_pred": 1716, + "n_ref": 13844 + }, + "2": { + "Dice": 0.3856182872896445, + "FN": 6513, + "FP": 4184, + "IoU": 0.23886438024761633, + "TN": 1064218, + "TP": 3357, + "n_pred": 7541, + "n_ref": 9870 + }, + "3": { + "Dice": 0.728900601391986, + "FN": 7617, + "FP": 407, + "IoU": 0.5734410717133592, + "TN": 1059461, + "TP": 10787, + "n_pred": 11194, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.09414376183325716, + "FN": 12575, + "FP": 1300, + "IoU": 0.04939709509454645, + "TN": 1063676, + "TP": 721, + "n_pred": 2021, + "n_ref": 13296 + }, + "2": { + "Dice": 0.45917022510411726, + "FN": 6445, + "FP": 3814, + "IoU": 0.29800191597098674, + "TN": 1063658, + "TP": 4355, + "n_pred": 8169, + "n_ref": 10800 + }, + "3": { + "Dice": 0.7765593404884119, + "FN": 5241, + "FP": 505, + "IoU": 0.6347339647829128, + "TN": 1062541, + "TP": 9985, + "n_pred": 10490, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4899851870934501, + "FN": 5328, + "FP": 2591, + "IoU": 0.3244903181779408, + "TN": 1094197, + "TP": 3804, + "n_pred": 6395, + "n_ref": 9132 + }, + "2": { + "Dice": 0.6137941367427459, + "FN": 5337, + "FP": 2396, + "IoU": 0.44278714512177547, + "TN": 1092042, + "TP": 6145, + "n_pred": 8541, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8598456776668556, + "FN": 1634, + "FP": 1581, + "IoU": 0.754148505008794, + "TN": 1092843, + "TP": 9862, + "n_pred": 11443, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.44507125890736343, + "FN": 1553, + "FP": 2185, + "IoU": 0.2862325759022341, + "TN": 1100683, + "TP": 1499, + "n_pred": 3684, + "n_ref": 3052 + }, + "2": { + "Dice": 0.7334883720930233, + "FN": 4467, + "FP": 1263, + "IoU": 0.5791406536907823, + "TN": 1092305, + "TP": 7885, + "n_pred": 9148, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7195304695304695, + "FN": 399, + "FP": 1847, + "IoU": 0.5619270528574215, + "TN": 1100793, + "TP": 2881, + "n_pred": 4728, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8660153904928233, + "FN": 1230, + "FP": 1225, + "IoU": 0.763692366926557, + "TN": 1136491, + "TP": 7934, + "n_pred": 9159, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8376743679163035, + "FN": 4043, + "FP": 1915, + "IoU": 0.7206882002719047, + "TN": 1125549, + "TP": 15373, + "n_pred": 17288, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9127663290254977, + "FN": 1477, + "FP": 521, + "IoU": 0.8395309613685648, + "TN": 1134429, + "TP": 10453, + "n_pred": 10974, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.19881656804733727, + "FN": 2046, + "FP": 1339, + "IoU": 0.11038107752956636, + "TN": 1143075, + "TP": 420, + "n_pred": 1759, + "n_ref": 2466 + }, + "2": { + "Dice": 0.701333528364904, + "FN": 10052, + "FP": 2199, + "IoU": 0.5400412990426131, + "TN": 1120245, + "TP": 14384, + "n_pred": 16583, + "n_ref": 24436 + }, + "3": { + "Dice": 0.6215615123492918, + "FN": 61, + "FP": 3172, + "IoU": 0.4509171195652174, + "TN": 1140992, + "TP": 2655, + "n_pred": 5827, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8038961581873667, + "FN": 2231, + "FP": 2460, + "IoU": 0.6720956242136167, + "TN": 786494, + "TP": 9615, + "n_pred": 12075, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8159050445103857, + "FN": 1760, + "FP": 1342, + "IoU": 0.6890537289494787, + "TN": 790824, + "TP": 6874, + "n_pred": 8216, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9497922848664688, + "FN": 651, + "FP": 195, + "IoU": 0.904385171790235, + "TN": 791952, + "TP": 8002, + "n_pred": 8197, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5004592134925273, + "FN": 942, + "FP": 5041, + "IoU": 0.3337416481069042, + "TN": 791820, + "TP": 2997, + "n_pred": 8038, + "n_ref": 3939 + }, + "2": { + "Dice": 0.7568502503413747, + "FN": 4338, + "FP": 1004, + "IoU": 0.6088166373755126, + "TN": 787144, + "TP": 8314, + "n_pred": 9318, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8164840253125483, + "FN": 201, + "FP": 988, + "IoU": 0.6898800208659364, + "TN": 796966, + "TP": 2645, + "n_pred": 3633, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6486118344617603, + "FN": 6097, + "FP": 2674, + "IoU": 0.4799596822008775, + "TN": 1330974, + "TP": 8095, + "n_pred": 10769, + "n_ref": 14192 + }, + "2": { + "Dice": 0.7195273968890575, + "FN": 3968, + "FP": 1207, + "IoU": 0.5619233048336578, + "TN": 1336027, + "TP": 6638, + "n_pred": 7845, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9286701520341326, + "FN": 1874, + "FP": 500, + "IoU": 0.8668386807269464, + "TN": 1330012, + "TP": 15454, + "n_pred": 15954, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7103984450923226, + "FN": 751, + "FP": 3421, + "IoU": 0.5508666164280331, + "TN": 1338551, + "TP": 5117, + "n_pred": 8538, + "n_ref": 5868 + }, + "2": { + "Dice": 0.690798961638304, + "FN": 4929, + "FP": 1503, + "IoU": 0.5276492619519718, + "TN": 1334223, + "TP": 7185, + "n_pred": 8688, + "n_ref": 12114 + }, + "3": { + "Dice": 0.8995059154163456, + "FN": 1696, + "FP": 521, + "IoU": 0.8173655161051158, + "TN": 1335701, + "TP": 9922, + "n_pred": 10443, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6575922565033273, + "FN": 4853, + "FP": 3071, + "IoU": 0.48986029743127535, + "TN": 836435, + "TP": 7609, + "n_pred": 10680, + "n_ref": 12462 + }, + "2": { + "Dice": 0.6717103485544448, + "FN": 3233, + "FP": 2842, + "IoU": 0.5056956875508544, + "TN": 839678, + "TP": 6215, + "n_pred": 9057, + "n_ref": 9448 + }, + "3": { + "Dice": 0.8811253851072487, + "FN": 3330, + "FP": 760, + "IoU": 0.7875103906899418, + "TN": 832720, + "TP": 15158, + "n_pred": 15918, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5738482384823849, + "FN": 2703, + "FP": 3587, + "IoU": 0.402375296912114, + "TN": 841443, + "TP": 4235, + "n_pred": 7822, + "n_ref": 6938 + }, + "2": { + "Dice": 0.7204986813713737, + "FN": 3779, + "FP": 2050, + "IoU": 0.5631089791635437, + "TN": 838626, + "TP": 7513, + "n_pred": 9563, + "n_ref": 11292 + }, + "3": { + "Dice": 0.8523922633186292, + "FN": 2948, + "FP": 532, + "IoU": 0.742755765819042, + "TN": 838440, + "TP": 10048, + "n_pred": 10580, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6296585874381027, + "FN": 2232, + "FP": 2031, + "IoU": 0.4594903004944846, + "TN": 844081, + "TP": 3624, + "n_pred": 5655, + "n_ref": 5856 + }, + "2": { + "Dice": 0.7323121110579225, + "FN": 3071, + "FP": 2521, + "IoU": 0.5776754021599577, + "TN": 838727, + "TP": 7649, + "n_pred": 10170, + "n_ref": 10720 + }, + "3": { + "Dice": 0.8948373138760446, + "FN": 2409, + "FP": 70, + "IoU": 0.8096883156763396, + "TN": 838942, + "TP": 10547, + "n_pred": 10617, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4404191616766467, + "FN": 633, + "FP": 3105, + "IoU": 0.28239585333077366, + "TN": 846759, + "TP": 1471, + "n_pred": 4576, + "n_ref": 2104 + }, + "2": { + "Dice": 0.7397769516728625, + "FN": 4029, + "FP": 1991, + "IoU": 0.5870206489675516, + "TN": 837391, + "TP": 8557, + "n_pred": 10548, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9036697247706422, + "FN": 1260, + "FP": 336, + "IoU": 0.8242677824267782, + "TN": 842886, + "TP": 7486, + "n_pred": 7822, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5682386134623136, + "FN": 6039, + "FP": 4673, + "IoU": 0.3968808062609087, + "TN": 779279, + "TP": 7049, + "n_pred": 11722, + "n_ref": 13088 + }, + "2": { + "Dice": 0.6902133922001472, + "FN": 3226, + "FP": 1826, + "IoU": 0.5269662921348315, + "TN": 786360, + "TP": 5628, + "n_pred": 7454, + "n_ref": 8854 + }, + "3": { + "Dice": 0.8957262210796915, + "FN": 2308, + "FP": 288, + "IoU": 0.8111450603812018, + "TN": 783294, + "TP": 11150, + "n_pred": 11438, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.37890666953066265, + "FN": 4140, + "FP": 7426, + "IoU": 0.23373525904332848, + "TN": 781946, + "TP": 3528, + "n_pred": 10954, + "n_ref": 7668 + }, + "2": { + "Dice": 0.7008092485549133, + "FN": 3560, + "FP": 1616, + "IoU": 0.5394198255917423, + "TN": 785802, + "TP": 6062, + "n_pred": 7678, + "n_ref": 9622 + }, + "3": { + "Dice": 0.8621130101575329, + "FN": 1945, + "FP": 322, + "IoU": 0.7576437887534745, + "TN": 787686, + "TP": 7087, + "n_pred": 7409, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6450212451505635, + "FN": 5485, + "FP": 2201, + "IoU": 0.4760379030608767, + "TN": 882001, + "TP": 6983, + "n_pred": 9184, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7281143496617325, + "FN": 3181, + "FP": 2164, + "IoU": 0.5724684050551911, + "TN": 884168, + "TP": 7157, + "n_pred": 9321, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9057606376554889, + "FN": 1002, + "FP": 1339, + "IoU": 0.827753660510632, + "TN": 883079, + "TP": 11250, + "n_pred": 12589, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5712208245473714, + "FN": 2428, + "FP": 3469, + "IoU": 0.39979643765903305, + "TN": 886845, + "TP": 3928, + "n_pred": 7397, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8217719005280498, + "FN": 2414, + "FP": 1535, + "IoU": 0.6974641844786639, + "TN": 883617, + "TP": 9104, + "n_pred": 10639, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9086734979562126, + "FN": 712, + "FP": 919, + "IoU": 0.8326321190354028, + "TN": 886925, + "TP": 8114, + "n_pred": 9033, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7282630623360904, + "FN": 4000, + "FP": 1388, + "IoU": 0.5726522842639594, + "TN": 749440, + "TP": 7220, + "n_pred": 8608, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8359394896347986, + "FN": 2206, + "FP": 1015, + "IoU": 0.718123742014527, + "TN": 750621, + "TP": 8206, + "n_pred": 9221, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9538786725850772, + "FN": 470, + "FP": 621, + "IoU": 0.9118241331932434, + "TN": 749675, + "TP": 11282, + "n_pred": 11903, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6416190970420342, + "FN": 701, + "FP": 2752, + "IoU": 0.47234107579462103, + "TN": 755504, + "TP": 3091, + "n_pred": 5843, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8277839437661857, + "FN": 2682, + "FP": 1042, + "IoU": 0.7061701120403977, + "TN": 749374, + "TP": 8950, + "n_pred": 9992, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9188649650648795, + "FN": 390, + "FP": 748, + "IoU": 0.8499076760749142, + "TN": 754466, + "TP": 6444, + "n_pred": 7192, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8101644245142003, + "FN": 1438, + "FP": 1610, + "IoU": 0.6809045226130653, + "TN": 985776, + "TP": 6504, + "n_pred": 8114, + "n_ref": 7942 + }, + "2": { + "Dice": 0.6646833829154272, + "FN": 3274, + "FP": 2249, + "IoU": 0.49777211966900065, + "TN": 984331, + "TP": 5474, + "n_pred": 7723, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9062741599762117, + "FN": 1307, + "FP": 1845, + "IoU": 0.8286118209994019, + "TN": 976937, + "TP": 15239, + "n_pred": 17084, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7202176741985093, + "FN": 198, + "FP": 2167, + "IoU": 0.5627657607690886, + "TN": 989919, + "TP": 3044, + "n_pred": 5211, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7930324251162243, + "FN": 1596, + "FP": 1921, + "IoU": 0.6570453437347635, + "TN": 985073, + "TP": 6738, + "n_pred": 8659, + "n_ref": 8334 + }, + "3": { + "Dice": 0.8883156846773463, + "FN": 799, + "FP": 1669, + "IoU": 0.7990718879752503, + "TN": 983045, + "TP": 9815, + "n_pred": 11484, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7441786028646875, + "FN": 5024, + "FP": 1370, + "IoU": 0.5925831527972474, + "TN": 742322, + "TP": 9300, + "n_pred": 10670, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8078551702976373, + "FN": 2230, + "FP": 901, + "IoU": 0.677648512303099, + "TN": 748303, + "TP": 6582, + "n_pred": 7483, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9433945908460472, + "FN": 419, + "FP": 887, + "IoU": 0.892854212814833, + "TN": 745827, + "TP": 10883, + "n_pred": 11770, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7367033648627694, + "FN": 485, + "FP": 2911, + "IoU": 0.5831594451945501, + "TN": 749869, + "TP": 4751, + "n_pred": 7662, + "n_ref": 5236 + }, + "2": { + "Dice": 0.829221583868424, + "FN": 1971, + "FP": 1061, + "IoU": 0.7082651784855191, + "TN": 747623, + "TP": 7361, + "n_pred": 8422, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8111360391596981, + "FN": 215, + "FP": 1637, + "IoU": 0.682278263853148, + "TN": 752187, + "TP": 3977, + "n_pred": 5614, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6790674291459813, + "FN": 2543, + "FP": 2564, + "IoU": 0.514081826831589, + "TN": 628466, + "TP": 5403, + "n_pred": 7967, + "n_ref": 7946 + }, + "2": { + "Dice": 0.6650111745716414, + "FN": 1349, + "FP": 2698, + "IoU": 0.49813988095238093, + "TN": 630912, + "TP": 4017, + "n_pred": 6715, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9211356466876972, + "FN": 910, + "FP": 190, + "IoU": 0.8538011695906432, + "TN": 631452, + "TP": 6424, + "n_pred": 6614, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5153386258943448, + "FN": 391, + "FP": 4554, + "IoU": 0.3471085291787695, + "TN": 631402, + "TP": 2629, + "n_pred": 7183, + "n_ref": 3020 + }, + "2": { + "Dice": 0.8146690284064817, + "FN": 1143, + "FP": 1682, + "IoU": 0.6872924507416427, + "TN": 629942, + "TP": 6209, + "n_pred": 7891, + "n_ref": 7352 + }, + "3": { + "Dice": 0.8934191702432046, + "FN": 258, + "FP": 338, + "IoU": 0.8073691014867486, + "TN": 635882, + "TP": 2498, + "n_pred": 2836, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6898467889179963, + "FN": 6750, + "FP": 1064, + "IoU": 0.5265390208434318, + "TN": 966536, + "TP": 8690, + "n_pred": 9754, + "n_ref": 15440 + }, + "2": { + "Dice": 0.7105805647442351, + "FN": 2485, + "FP": 3552, + "IoU": 0.5510856632956573, + "TN": 969592, + "TP": 7411, + "n_pred": 10963, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9387440888595623, + "FN": 414, + "FP": 1257, + "IoU": 0.884559585492228, + "TN": 968565, + "TP": 12804, + "n_pred": 14061, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7859760956175299, + "FN": 1256, + "FP": 1430, + "IoU": 0.6474140194276713, + "TN": 975422, + "TP": 4932, + "n_pred": 6362, + "n_ref": 6188 + }, + "2": { + "Dice": 0.7598031906962874, + "FN": 2312, + "FP": 2521, + "IoU": 0.6126472709786006, + "TN": 970563, + "TP": 7644, + "n_pred": 10165, + "n_ref": 9956 + }, + "3": { + "Dice": 0.8280154528544856, + "FN": 203, + "FP": 2201, + "IoU": 0.7065071419851056, + "TN": 974849, + "TP": 5787, + "n_pred": 7988, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8589227774172615, + "FN": 2944, + "FP": 1404, + "IoU": 0.752729754322111, + "TN": 1030992, + "TP": 13236, + "n_pred": 14640, + "n_ref": 16180 + }, + "2": { + "Dice": 0.7887120984689282, + "FN": 2140, + "FP": 1379, + "IoU": 0.6511351244175672, + "TN": 1038489, + "TP": 6568, + "n_pred": 7947, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9351519502273271, + "FN": 536, + "FP": 1090, + "IoU": 0.8782022471910113, + "TN": 1035226, + "TP": 11724, + "n_pred": 12814, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6446438800840175, + "FN": 366, + "FP": 5217, + "IoU": 0.4756269371653987, + "TN": 1037929, + "TP": 5064, + "n_pred": 10281, + "n_ref": 5430 + }, + "2": { + "Dice": 0.794731871130234, + "FN": 2749, + "FP": 1163, + "IoU": 0.6593818023508925, + "TN": 1037091, + "TP": 7573, + "n_pred": 8736, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9144909249733087, + "FN": 369, + "FP": 512, + "IoU": 0.8424535050071531, + "TN": 1042984, + "TP": 4711, + "n_pred": 5223, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2353859080542552, + "FN": 9201, + "FP": 3539, + "IoU": 0.13339228623903135, + "TN": 474515, + "TP": 1961, + "n_pred": 5500, + "n_ref": 11162 + }, + "2": { + "Dice": 0.36442316545437803, + "FN": 738, + "FP": 6165, + "IoU": 0.2228101778878631, + "TN": 480334, + "TP": 1979, + "n_pred": 8144, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9029738660258336, + "FN": 142, + "FP": 827, + "IoU": 0.8231106243154436, + "TN": 483738, + "TP": 4509, + "n_pred": 5336, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6347396955584903, + "FN": 2085, + "FP": 3170, + "IoU": 0.46492210569188475, + "TN": 479395, + "TP": 4566, + "n_pred": 7736, + "n_ref": 6651 + }, + "2": { + "Dice": 0.5478514642246151, + "FN": 638, + "FP": 3855, + "IoU": 0.37726957726957727, + "TN": 482001, + "TP": 2722, + "n_pred": 6577, + "n_ref": 3360 + }, + "3": { + "Dice": 0.7913503565677479, + "FN": 70, + "FP": 837, + "IoU": 0.6547392462885421, + "TN": 486589, + "TP": 1720, + "n_pred": 2557, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8495190816009929, + "FN": 3555, + "FP": 810, + "IoU": 0.738403451995685, + "TN": 463794, + "TP": 12321, + "n_pred": 13131, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7382090172449616, + "FN": 966, + "FP": 1554, + "IoU": 0.5850485756627697, + "TN": 474407, + "TP": 3553, + "n_pred": 5107, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9390288426433004, + "FN": 530, + "FP": 305, + "IoU": 0.8850653819683414, + "TN": 473215, + "TP": 6430, + "n_pred": 6735, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8277496695382652, + "FN": 2531, + "FP": 1248, + "IoU": 0.7061202270783109, + "TN": 467621, + "TP": 9080, + "n_pred": 10328, + "n_ref": 11611 + }, + "2": { + "Dice": 0.7177700348432056, + "FN": 1851, + "FP": 1146, + "IoU": 0.5597826086956522, + "TN": 473672, + "TP": 3811, + "n_pred": 4957, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8546651678175686, + "FN": 145, + "FP": 760, + "IoU": 0.7462142456533931, + "TN": 476914, + "TP": 2661, + "n_pred": 3421, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.625468284717108, + "FN": 10905, + "FP": 792, + "IoU": 0.4550409988818487, + "TN": 623176, + "TP": 9767, + "n_pred": 10559, + "n_ref": 20672 + }, + "2": { + "Dice": 0.5643477753804886, + "FN": 4227, + "FP": 3244, + "IoU": 0.39309504467912265, + "TN": 632330, + "TP": 4839, + "n_pred": 8083, + "n_ref": 9066 + }, + "3": { + "Dice": 0.8793548643387756, + "FN": 2930, + "FP": 107, + "IoU": 0.784686281460475, + "TN": 630535, + "TP": 11068, + "n_pred": 11175, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6544185486782462, + "FN": 7175, + "FP": 1440, + "IoU": 0.48634629143811114, + "TN": 627868, + "TP": 8157, + "n_pred": 9597, + "n_ref": 15332 + }, + "2": { + "Dice": 0.7119174801989316, + "FN": 4436, + "FP": 1820, + "IoU": 0.5526955526955527, + "TN": 630654, + "TP": 7730, + "n_pred": 9550, + "n_ref": 12166 + }, + "3": { + "Dice": 0.8698196665532494, + "FN": 1171, + "FP": 742, + "IoU": 0.7696290944123314, + "TN": 636336, + "TP": 6391, + "n_pred": 7133, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7493537432206396, + "FN": 7268, + "FP": 2622, + "IoU": 0.5991732187727973, + "TN": 539806, + "TP": 14784, + "n_pred": 17406, + "n_ref": 22052 + }, + "2": { + "Dice": 0.5645813881107998, + "FN": 1748, + "FP": 2449, + "IoU": 0.3933217692974848, + "TN": 557562, + "TP": 2721, + "n_pred": 5170, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9029492009873977, + "FN": 947, + "FP": 547, + "IoU": 0.8230696352439603, + "TN": 556036, + "TP": 6950, + "n_pred": 7497, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6722403287515941, + "FN": 1316, + "FP": 5623, + "IoU": 0.5062966915688367, + "TN": 550425, + "TP": 7116, + "n_pred": 12739, + "n_ref": 8432 + }, + "2": { + "Dice": 0.6746987951807228, + "FN": 1279, + "FP": 2177, + "IoU": 0.509090909090909, + "TN": 557440, + "TP": 3584, + "n_pred": 5761, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8310277957336781, + "FN": 238, + "FP": 1069, + "IoU": 0.7109046671090467, + "TN": 559959, + "TP": 3214, + "n_pred": 4283, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4208434533009494, + "FN": 4716, + "FP": 3153, + "IoU": 0.26649888143176736, + "TN": 408152, + "TP": 2859, + "n_pred": 6012, + "n_ref": 7575 + }, + "2": { + "Dice": 0.1620392920928722, + "FN": 2357, + "FP": 2804, + "IoU": 0.0881625441696113, + "TN": 413220, + "TP": 499, + "n_pred": 3303, + "n_ref": 2856 + }, + "3": { + "Dice": 0.6544174276598086, + "FN": 1225, + "FP": 1916, + "IoU": 0.48634505314799675, + "TN": 412765, + "TP": 2974, + "n_pred": 4890, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5911602209944752, + "FN": 1206, + "FP": 3678, + "IoU": 0.4196078431372549, + "TN": 410465, + "TP": 3531, + "n_pred": 7209, + "n_ref": 4737 + }, + "2": { + "Dice": 0.1915782706525233, + "FN": 2397, + "FP": 2633, + "IoU": 0.10593672236046925, + "TN": 413254, + "TP": 596, + "n_pred": 3229, + "n_ref": 2993 + }, + "3": { + "Dice": 0.6881400111711041, + "FN": 535, + "FP": 1140, + "IoU": 0.5245529378370707, + "TN": 415357, + "TP": 1848, + "n_pred": 2988, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8048187444739169, + "FN": 2643, + "FP": 2655, + "IoU": 0.6733863510264472, + "TN": 480289, + "TP": 10923, + "n_pred": 13578, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8228646517739816, + "FN": 1410, + "FP": 1286, + "IoU": 0.6990399642777406, + "TN": 487552, + "TP": 6262, + "n_pred": 7548, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9389371486969852, + "FN": 422, + "FP": 534, + "IoU": 0.8849024801348423, + "TN": 488204, + "TP": 7350, + "n_pred": 7884, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7751546236234726, + "FN": 2985, + "FP": 2977, + "IoU": 0.6328591662048155, + "TN": 480271, + "TP": 10277, + "n_pred": 13254, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8173628173628174, + "FN": 1989, + "FP": 910, + "IoU": 0.6911357340720221, + "TN": 487124, + "TP": 6487, + "n_pred": 7397, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8569178262011027, + "FN": 136, + "FP": 954, + "IoU": 0.7496554892053284, + "TN": 492156, + "TP": 3264, + "n_pred": 4218, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_002/summary_cross_val.json b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_002/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..ac382de13e2fa91187dddd1f03b249b2db4e934d --- /dev/null +++ b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_002/summary_cross_val.json @@ -0,0 +1,2580 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.29808380717591504, + "FN": 47.769230769230774, + "FP": 82.15384615384615, + "IoU": 0.2428938359828818, + "TN": 1049.5128205128206, + "TP": 51.333333333333336, + "n_pred": 133.48717948717947, + "n_ref": 99.1025641025641 + }, + "mean": { + "1": { + "Dice": 0.15097360260400058, + "FN": 43.30769230769231, + "FP": 160.6153846153846, + "IoU": 0.12120280133750819, + "TN": 979.5384615384615, + "TP": 47.30769230769231, + "n_pred": 207.92307692307693, + "n_ref": 90.61538461538461 + }, + "2": { + "Dice": 0.295702541156161, + "FN": 86.07692307692308, + "FP": 28.76923076923077, + "IoU": 0.2240371397076451, + "TN": 1054.1538461538462, + "TP": 61.76923076923077, + "n_pred": 90.53846153846153, + "n_ref": 147.84615384615384 + }, + "3": { + "Dice": 0.4475752777675835, + "FN": 13.923076923076923, + "FP": 57.07692307692308, + "IoU": 0.38344156690349207, + "TN": 1114.8461538461538, + "TP": 44.92307692307692, + "n_pred": 102.0, + "n_ref": 58.84615384615385 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 209, + "IoU": 0.0, + "TN": 591, + "TP": 0, + "n_pred": 209, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 168, + "IoU": 0.0, + "TN": 632, + "TP": 0, + "n_pred": 168, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 790, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2077922077922078, + "FN": 488, + "FP": 0, + "IoU": 0.11594202898550725, + "TN": 1848, + "TP": 64, + "n_pred": 64, + "n_ref": 552 + }, + "2": { + "Dice": 0.42342342342342343, + "FN": 148, + "FP": 108, + "IoU": 0.26857142857142857, + "TN": 2050, + "TP": 94, + "n_pred": 202, + "n_ref": 242 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 649, + "IoU": 0.0, + "TN": 1751, + "TP": 0, + "n_pred": 649, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 15, + "IoU": 0.0, + "TN": 2385, + "TP": 0, + "n_pred": 15, + "n_ref": 0 + }, + "2": { + "Dice": 0.24752475247524752, + "FN": 600, + "FP": 8, + "IoU": 0.14124293785310735, + "TN": 1692, + "TP": 100, + "n_pred": 108, + "n_ref": 700 + }, + "3": { + "Dice": 0.1308411214953271, + "FN": 93, + "FP": 0, + "IoU": 0.07, + "TN": 2300, + "TP": 7, + "n_pred": 7, + "n_ref": 100 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.116, + "FN": 63, + "FP": 379, + "IoU": 0.06157112526539278, + "TN": 1929, + "TP": 29, + "n_pred": 408, + "n_ref": 92 + }, + "2": { + "Dice": 0.9208282582216809, + "FN": 48, + "FP": 17, + "IoU": 0.8532731376975169, + "TN": 1957, + "TP": 378, + "n_pred": 395, + "n_ref": 426 + }, + "3": { + "Dice": 0.9062087186261559, + "FN": 31, + "FP": 40, + "IoU": 0.8285024154589372, + "TN": 1986, + "TP": 343, + "n_pred": 383, + "n_ref": 374 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 581, + "IoU": 0.0, + "TN": 219, + "TP": 0, + "n_pred": 581, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 250, + "IoU": 0.0, + "TN": 550, + "TP": 0, + "n_pred": 250, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 793, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 529, + "IoU": 0.0, + "TN": 271, + "TP": 0, + "n_pred": 529, + "n_ref": 0 + }, + "2": { + "Dice": 0.4, + "FN": 228, + "FP": 0, + "IoU": 0.25, + "TN": 496, + "TP": 76, + "n_pred": 76, + "n_ref": 304 + }, + "3": { + "Dice": 0.8333333333333334, + "FN": 3, + "FP": 43, + "IoU": 0.7142857142857143, + "TN": 639, + "TP": 115, + "n_pred": 158, + "n_ref": 118 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6695464362850972, + "FN": 95, + "FP": 58, + "IoU": 0.5032467532467533, + "TN": 492, + "TP": 155, + "n_pred": 213, + "n_ref": 250 + }, + "3": { + "Dice": 0.815068493150685, + "FN": 54, + "FP": 0, + "IoU": 0.6878612716763006, + "TN": 627, + "TP": 119, + "n_pred": 119, + "n_ref": 173 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8839966130397968, + "FN": 12, + "FP": 125, + "IoU": 0.7921092564491654, + "TN": 941, + "TP": 522, + "n_pred": 647, + "n_ref": 534 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 1594, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.6584200097584748, + "FN": 55.58974358974359, + "FP": 21.74358974358974, + "IoU": 0.5878001154176449, + "TN": 658.2051282051282, + "TP": 126.0, + "n_pred": 147.74358974358975, + "n_ref": 181.58974358974356 + }, + "mean": { + "1": { + "Dice": 0.5993966837122772, + "FN": 111.6923076923077, + "FP": 16.0, + "IoU": 0.5557698494186367, + "TN": 630.3076923076923, + "TP": 103.53846153846153, + "n_pred": 119.53846153846153, + "n_ref": 215.23076923076923 + }, + "2": { + "Dice": 0.5722419479138533, + "FN": 38.15384615384615, + "FP": 11.538461538461538, + "IoU": 0.4619035558388968, + "TN": 728.2307692307693, + "TP": 83.61538461538461, + "n_pred": 95.15384615384616, + "n_ref": 121.76923076923077 + }, + "3": { + "Dice": 0.8036213976492939, + "FN": 16.923076923076923, + "FP": 37.69230769230769, + "IoU": 0.7457269409954009, + "TN": 616.0769230769231, + "TP": 190.84615384615384, + "n_pred": 228.53846153846155, + "n_ref": 207.76923076923077 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9527272727272728, + "FN": 0, + "FP": 52, + "IoU": 0.9097222222222222, + "TN": 224, + "TP": 524, + "n_pred": 576, + "n_ref": 524 + }, + "2": { + "Dice": 0.8241758241758241, + "FN": 58, + "FP": 6, + "IoU": 0.7009345794392523, + "TN": 586, + "TP": 150, + "n_pred": 156, + "n_ref": 208 + }, + "3": { + "Dice": 0.9117647058823529, + "FN": 6, + "FP": 6, + "IoU": 0.8378378378378378, + "TN": 726, + "TP": 62, + "n_pred": 68, + "n_ref": 68 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6715328467153284, + "FN": 44, + "FP": 1, + "IoU": 0.5054945054945055, + "TN": 709, + "TP": 46, + "n_pred": 47, + "n_ref": 90 + }, + "3": { + "Dice": 0.9145038167938931, + "FN": 111, + "FP": 1, + "IoU": 0.8424753867791842, + "TN": 89, + "TP": 599, + "n_pred": 600, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.07453416149068323, + "FN": 0, + "FP": 149, + "IoU": 0.03870967741935484, + "TN": 645, + "TP": 6, + "n_pred": 155, + "n_ref": 6 + }, + "2": { + "Dice": 0.7742639040348964, + "FN": 185, + "FP": 22, + "IoU": 0.6316725978647687, + "TN": 238, + "TP": 355, + "n_pred": 377, + "n_ref": 540 + }, + "3": { + "Dice": 0.925, + "FN": 22, + "FP": 2, + "IoU": 0.8604651162790697, + "TN": 628, + "TP": 148, + "n_pred": 150, + "n_ref": 170 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.9974937343358395, + "FN": 4, + "FP": 0, + "IoU": 0.995, + "TN": 0, + "TP": 796, + "n_pred": 796, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.46963562753036436, + "FN": 118, + "FP": 13, + "IoU": 0.30687830687830686, + "TN": 611, + "TP": 58, + "n_pred": 71, + "n_ref": 176 + }, + "3": { + "Dice": 0.875, + "FN": 0, + "FP": 80, + "IoU": 0.7777777777777778, + "TN": 440, + "TP": 280, + "n_pred": 360, + "n_ref": 280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.896124031007752, + "FN": 27, + "FP": 40, + "IoU": 0.8117977528089888, + "TN": 444, + "TP": 289, + "n_pred": 329, + "n_ref": 316 + }, + "3": { + "Dice": 0.8536585365853658, + "FN": 33, + "FP": 3, + "IoU": 0.7446808510638298, + "TN": 659, + "TP": 105, + "n_pred": 108, + "n_ref": 138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9032258064516129, + "FN": 0, + "FP": 3, + "IoU": 0.8235294117647058, + "TN": 783, + "TP": 14, + "n_pred": 17, + "n_ref": 14 + }, + "2": { + "Dice": 0.7940552016985138, + "FN": 64, + "FP": 33, + "IoU": 0.6584507042253521, + "TN": 516, + "TP": 187, + "n_pred": 220, + "n_ref": 251 + }, + "3": { + "Dice": 0.9515503875968992, + "FN": 44, + "FP": 6, + "IoU": 0.9075785582255084, + "TN": 259, + "TP": 491, + "n_pred": 497, + "n_ref": 535 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.08584240871236387, + "FN": 1427, + "FP": 0, + "IoU": 0.04484605087014726, + "TN": 106, + "TP": 67, + "n_pred": 67, + "n_ref": 1494 + }, + "2": { + "Dice": 0.14814814814814814, + "FN": 0, + "FP": 23, + "IoU": 0.08, + "TN": 1575, + "TP": 2, + "n_pred": 25, + "n_ref": 2 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 392, + "IoU": 0.0, + "TN": 1208, + "TP": 0, + "n_pred": 392, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.980653769179453, + "FN": 25, + "FP": 4, + "IoU": 0.9620418848167539, + "TN": 36, + "TP": 735, + "n_pred": 739, + "n_ref": 760 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 12, + "IoU": 0.0, + "TN": 788, + "TP": 0, + "n_pred": 12, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame12.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.3781354186118011, + "FN": 25.74358974358974, + "FP": 36.82051282051282, + "IoU": 0.3024353715920262, + "TN": 949.025641025641, + "TP": 34.56410256410256, + "n_pred": 71.38461538461539, + "n_ref": 60.307692307692314 + }, + "mean": { + "1": { + "Dice": 0.125, + "FN": 0.9230769230769231, + "FP": 48.84615384615385, + "IoU": 0.08333333333333333, + "TN": 995.9230769230769, + "TP": 0.46153846153846156, + "n_pred": 49.30769230769231, + "n_ref": 1.3846153846153846 + }, + "2": { + "Dice": 0.2831668958551757, + "FN": 33.53846153846154, + "FP": 51.46153846153846, + "IoU": 0.2256542168266715, + "TN": 909.6153846153846, + "TP": 51.53846153846154, + "n_pred": 103.0, + "n_ref": 85.07692307692308 + }, + "3": { + "Dice": 0.7262393599802277, + "FN": 42.76923076923077, + "FP": 10.153846153846153, + "IoU": 0.5983185646160738, + "TN": 941.5384615384615, + "TP": 51.69230769230769, + "n_pred": 61.84615384615385, + "n_ref": 94.46153846153847 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 607, + "IoU": 0.0, + "TN": 1793, + "TP": 0, + "n_pred": 607, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 2395, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 22, + "IoU": 0.0, + "TN": 778, + "TP": 0, + "n_pred": 22, + "n_ref": 0 + }, + "2": { + "Dice": 0.046242774566473986, + "FN": 0, + "FP": 495, + "IoU": 0.023668639053254437, + "TN": 293, + "TP": 12, + "n_pred": 507, + "n_ref": 12 + }, + "3": { + "Dice": 0.47876447876447875, + "FN": 540, + "FP": 0, + "IoU": 0.3147208121827411, + "TN": 12, + "TP": 248, + "n_pred": 248, + "n_ref": 788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5, + "FN": 6, + "FP": 6, + "IoU": 0.3333333333333333, + "TN": 782, + "TP": 6, + "n_pred": 12, + "n_ref": 12 + }, + "2": { + "Dice": 0.4483985765124555, + "FN": 306, + "FP": 4, + "IoU": 0.2889908256880734, + "TN": 364, + "TP": 126, + "n_pred": 130, + "n_ref": 432 + }, + "3": { + "Dice": 0.6666666666666666, + "FN": 4, + "FP": 4, + "IoU": 0.5, + "TN": 784, + "TP": 8, + "n_pred": 12, + "n_ref": 12 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9437652811735942, + "FN": 8, + "FP": 38, + "IoU": 0.8935185185185185, + "TN": 368, + "TP": 386, + "n_pred": 424, + "n_ref": 394 + }, + "3": { + "Dice": 0.9323308270676691, + "FN": 12, + "FP": 6, + "IoU": 0.8732394366197183, + "TN": 658, + "TP": 124, + "n_pred": 130, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 0, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 0, + "n_ref": 6 + }, + "2": { + "Dice": 0.5437616387337058, + "FN": 122, + "FP": 123, + "IoU": 0.3734015345268542, + "TN": 409, + "TP": 146, + "n_pred": 269, + "n_ref": 268 + }, + "3": { + "Dice": 0.8271954674220963, + "FN": 0, + "FP": 122, + "IoU": 0.7053140096618358, + "TN": 386, + "TP": 292, + "n_pred": 414, + "n_ref": 292 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.41194449921570014, + "FN": 81.07692307692308, + "FP": 32.0, + "IoU": 0.3093979087884456, + "TN": 986.5897435897436, + "TP": 69.56410256410255, + "n_pred": 101.56410256410258, + "n_ref": 150.64102564102564 + }, + "mean": { + "1": { + "Dice": 0.4777084886940529, + "FN": 77.46153846153847, + "FP": 46.92307692307692, + "IoU": 0.3808852291504226, + "TN": 905.6153846153846, + "TP": 139.23076923076923, + "n_pred": 186.15384615384616, + "n_ref": 216.69230769230768 + }, + "2": { + "Dice": 0.4639277683866985, + "FN": 58.84615384615385, + "FP": 11.692307692307692, + "IoU": 0.3474263943942098, + "TN": 1063.6923076923076, + "TP": 35.0, + "n_pred": 46.69230769230769, + "n_ref": 93.84615384615384 + }, + "3": { + "Dice": 0.2941972405663488, + "FN": 106.92307692307692, + "FP": 37.38461538461539, + "IoU": 0.1998821028207044, + "TN": 990.4615384615385, + "TP": 34.46153846153846, + "n_pred": 71.84615384615384, + "n_ref": 141.3846153846154 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 333, + "IoU": 0.0, + "TN": 1267, + "TP": 0, + "n_pred": 333, + "n_ref": 0 + }, + "2": { + "Dice": 0.683291770573566, + "FN": 23, + "FP": 104, + "IoU": 0.5189393939393939, + "TN": 1336, + "TP": 137, + "n_pred": 241, + "n_ref": 160 + }, + "3": { + "Dice": 0.18855218855218855, + "FN": 1190, + "FP": 15, + "IoU": 0.10408921933085502, + "TN": 255, + "TP": 140, + "n_pred": 155, + "n_ref": 1330 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 136, + "FP": 0, + "IoU": 0.0, + "TN": 1464, + "TP": 0, + "n_pred": 0, + "n_ref": 136 + }, + "2": { + "Dice": 0.19680851063829788, + "FN": 299, + "FP": 3, + "IoU": 0.10914454277286136, + "TN": 1261, + "TP": 37, + "n_pred": 40, + "n_ref": 336 + }, + "3": { + "Dice": 0.42040185471406494, + "FN": 0, + "FP": 375, + "IoU": 0.26614481409001955, + "TN": 1089, + "TP": 136, + "n_pred": 511, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7783350050150452, + "FN": 194, + "FP": 27, + "IoU": 0.6371100164203612, + "TN": 191, + "TP": 388, + "n_pred": 415, + "n_ref": 582 + }, + "2": { + "Dice": 0.9045226130653267, + "FN": 30, + "FP": 8, + "IoU": 0.8256880733944955, + "TN": 582, + "TP": 180, + "n_pred": 188, + "n_ref": 210 + }, + "3": { + "Dice": 0.0, + "FN": 8, + "FP": 0, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 0, + "n_ref": 8 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.580226904376013, + "FN": 259, + "FP": 0, + "IoU": 0.408675799086758, + "TN": 362, + "TP": 179, + "n_pred": 179, + "n_ref": 438 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4685466377440347, + "FN": 84, + "FP": 161, + "IoU": 0.3059490084985836, + "TN": 447, + "TP": 108, + "n_pred": 269, + "n_ref": 192 + }, + "2": { + "Dice": 0.3488372093023256, + "FN": 165, + "FP": 3, + "IoU": 0.2112676056338028, + "TN": 587, + "TP": 45, + "n_pred": 48, + "n_ref": 210 + }, + "3": { + "Dice": 0.6846846846846847, + "FN": 104, + "FP": 1, + "IoU": 0.5205479452054794, + "TN": 581, + "TP": 114, + "n_pred": 115, + "n_ref": 218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3270440251572327, + "FN": 57, + "FP": 50, + "IoU": 0.19548872180451127, + "TN": 1467, + "TP": 26, + "n_pred": 76, + "n_ref": 83 + }, + "2": { + "Dice": 0.07874015748031496, + "FN": 85, + "FP": 32, + "IoU": 0.040983606557377046, + "TN": 1478, + "TP": 5, + "n_pred": 37, + "n_ref": 90 + }, + "3": { + "Dice": 0.4715447154471545, + "FN": 88, + "FP": 42, + "IoU": 0.30851063829787234, + "TN": 1412, + "TP": 58, + "n_pred": 100, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6687763713080169, + "FN": 277, + "FP": 37, + "IoU": 0.5023771790808241, + "TN": 969, + "TP": 317, + "n_pred": 354, + "n_ref": 594 + }, + "2": { + "Dice": 0.3686274509803922, + "FN": 159, + "FP": 2, + "IoU": 0.22596153846153846, + "TN": 1392, + "TP": 47, + "n_pred": 49, + "n_ref": 206 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 53, + "IoU": 0.0, + "TN": 1547, + "TP": 0, + "n_pred": 53, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9987389659520807, + "FN": 0, + "FP": 2, + "IoU": 0.9974811083123426, + "TN": 6, + "TP": 792, + "n_pred": 794, + "n_ref": 792 + }, + "2": { + "Dice": 0.6666666666666666, + "FN": 4, + "FP": 0, + "IoU": 0.5, + "TN": 792, + "TP": 4, + "n_pred": 4, + "n_ref": 8 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.3928039461475769, + "FN": 56.55555555555555, + "FP": 33.69444444444444, + "IoU": 0.33527737381362854, + "TN": 1158.5, + "TP": 84.58333333333333, + "n_pred": 118.27777777777777, + "n_ref": 141.1388888888889 + }, + "mean": { + "1": { + "Dice": 0.31631849320780353, + "FN": 33.25, + "FP": 52.416666666666664, + "IoU": 0.26089742964013474, + "TN": 1159.9166666666667, + "TP": 87.75, + "n_pred": 140.16666666666666, + "n_ref": 121.0 + }, + "2": { + "Dice": 0.3842583366692306, + "FN": 59.416666666666664, + "FP": 35.583333333333336, + "IoU": 0.33691735124497957, + "TN": 1151.6666666666667, + "TP": 86.66666666666667, + "n_pred": 122.25, + "n_ref": 146.08333333333334 + }, + "3": { + "Dice": 0.47783500856569666, + "FN": 77.0, + "FP": 13.083333333333334, + "IoU": 0.4080173405557714, + "TN": 1163.9166666666667, + "TP": 79.33333333333333, + "n_pred": 92.41666666666667, + "n_ref": 156.33333333333334 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 226, + "FP": 0, + "IoU": 0.0, + "TN": 1374, + "TP": 0, + "n_pred": 0, + "n_ref": 226 + }, + "3": { + "Dice": 0.0, + "FN": 188, + "FP": 0, + "IoU": 0.0, + "TN": 1412, + "TP": 0, + "n_pred": 0, + "n_ref": 188 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.009302325581395349, + "FN": 163, + "FP": 50, + "IoU": 0.004672897196261682, + "TN": 586, + "TP": 1, + "n_pred": 51, + "n_ref": 164 + }, + "3": { + "Dice": 0.29017160686427457, + "FN": 455, + "FP": 0, + "IoU": 0.16970802919708028, + "TN": 252, + "TP": 93, + "n_pred": 93, + "n_ref": 548 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8823104693140794, + "FN": 163, + "FP": 0, + "IoU": 0.789405684754522, + "TN": 26, + "TP": 611, + "n_pred": 611, + "n_ref": 774 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 416, + "IoU": 0.0, + "TN": 1984, + "TP": 0, + "n_pred": 416, + "n_ref": 0 + }, + "2": { + "Dice": 0.3641304347826087, + "FN": 272, + "FP": 196, + "IoU": 0.22259136212624583, + "TN": 1798, + "TP": 134, + "n_pred": 330, + "n_ref": 406 + }, + "3": { + "Dice": 0.7573467674223342, + "FN": 251, + "FP": 38, + "IoU": 0.6094594594594595, + "TN": 1660, + "TP": 451, + "n_pred": 489, + "n_ref": 702 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 82, + "IoU": 0.0, + "TN": 1518, + "TP": 0, + "n_pred": 82, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 77, + "IoU": 0.0, + "TN": 1523, + "TP": 0, + "n_pred": 77, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 68, + "IoU": 0.0, + "TN": 1532, + "TP": 0, + "n_pred": 68, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 26, + "IoU": 0.0, + "TN": 774, + "TP": 0, + "n_pred": 26, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.9548511047070125, + "FN": 17, + "FP": 30, + "IoU": 0.9136029411764706, + "TN": 256, + "TP": 497, + "n_pred": 527, + "n_ref": 514 + }, + "3": { + "Dice": 0.9144144144144144, + "FN": 27, + "FP": 11, + "IoU": 0.8423236514522822, + "TN": 559, + "TP": 203, + "n_pred": 214, + "n_ref": 230 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.23121387283236994, + "FN": 8, + "FP": 125, + "IoU": 0.13071895424836602, + "TN": 2247, + "TP": 20, + "n_pred": 145, + "n_ref": 28 + }, + "2": { + "Dice": 0.9175, + "FN": 35, + "FP": 31, + "IoU": 0.8475750577367206, + "TN": 1967, + "TP": 367, + "n_pred": 398, + "n_ref": 402 + }, + "3": { + "Dice": 0.9050772626931567, + "FN": 3, + "FP": 40, + "IoU": 0.8266129032258065, + "TN": 2152, + "TP": 205, + "n_pred": 245, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7843866171003717, + "FN": 228, + "FP": 4, + "IoU": 0.6452599388379205, + "TN": 1746, + "TP": 422, + "n_pred": 426, + "n_ref": 650 + }, + "2": { + "Dice": 0.8282828282828283, + "FN": 0, + "FP": 17, + "IoU": 0.7068965517241379, + "TN": 2342, + "TP": 41, + "n_pred": 58, + "n_ref": 41 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2854762/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.4278775361818936, + "FN": 53.34700854700854, + "FP": 41.28247863247863, + "IoU": 0.3555609211189254, + "TN": 960.3666666666668, + "TP": 73.20897435897436, + "n_pred": 114.491452991453, + "n_ref": 126.55598290598292 + }, + "mean": { + "1": { + "Dice": 0.3338794536436268, + "FN": 53.32692307692308, + "FP": 64.9602564102564, + "IoU": 0.2804177285760071, + "TN": 934.2602564102565, + "TP": 75.65769230769232, + "n_pred": 140.6179487179487, + "n_ref": 128.98461538461538 + }, + "2": { + "Dice": 0.39985949799622383, + "FN": 55.20641025641025, + "FP": 27.80897435897436, + "IoU": 0.31918773160248054, + "TN": 981.4717948717949, + "TP": 63.717948717948715, + "n_pred": 91.52692307692307, + "n_ref": 118.92435897435898 + }, + "3": { + "Dice": 0.5498936569058301, + "FN": 51.50769230769231, + "FP": 31.078205128205134, + "IoU": 0.46707730317828855, + "TN": 965.3679487179488, + "TP": 80.25128205128205, + "n_pred": 111.32948717948719, + "n_ref": 131.75897435897437 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_003/summary.json b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_003/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..3ac2554ea0d7336e262c50f1d0804fe1327631d4 --- /dev/null +++ b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_003/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.7418357984990657, + "FN": 2473.7200000000003, + "FP": 1887.6466666666665, + "IoU": 0.6178355108925863, + "TN": 842346.88, + "TP": 7720.393333333333, + "n_pred": 9608.04, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.6514551833451695, + "FN": 3364.14, + "FP": 2483.9, + "IoU": 0.4996558852807281, + "TN": 842090.68, + "TP": 6489.92, + "n_pred": 8973.82, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.703519808957069, + "FN": 3189.88, + "FP": 1969.08, + "IoU": 0.5597286626537838, + "TN": 842404.06, + "TP": 6865.62, + "n_pred": 8834.7, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8705324031949584, + "FN": 867.14, + "FP": 1209.96, + "IoU": 0.794121984743247, + "TN": 842545.9, + "TP": 9805.64, + "n_pred": 11015.6, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7916451983670881, + "FN": 1459, + "FP": 3798, + "IoU": 0.6551430070847547, + "TN": 1090676, + "TP": 9987, + "n_pred": 13785, + "n_ref": 11446 + }, + "2": { + "Dice": 0.7876740210046406, + "FN": 3781, + "FP": 1435, + "IoU": 0.6497213081727218, + "TN": 1091029, + "TP": 9675, + "n_pred": 11110, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9302067034505477, + "FN": 1617, + "FP": 1773, + "IoU": 0.8695200338709057, + "TN": 1079939, + "TP": 22591, + "n_pred": 24364, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6750454050127134, + "FN": 232, + "FP": 4241, + "IoU": 0.5094856892203092, + "TN": 1096801, + "TP": 4646, + "n_pred": 8887, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8050095668811967, + "FN": 4410, + "FP": 1195, + "IoU": 0.6736535662299854, + "TN": 1088745, + "TP": 11570, + "n_pred": 12765, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9265386802415315, + "FN": 1373, + "FP": 1340, + "IoU": 0.8631318736757139, + "TN": 1086098, + "TP": 17109, + "n_pred": 18449, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7079436952455951, + "FN": 1678, + "FP": 4256, + "IoU": 0.547920158464117, + "TN": 896314, + "TP": 7192, + "n_pred": 11448, + "n_ref": 8870 + }, + "2": { + "Dice": 0.7497121237045566, + "FN": 4671, + "FP": 1415, + "IoU": 0.5996316031840011, + "TN": 894239, + "TP": 9115, + "n_pred": 10530, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9610617371726508, + "FN": 1136, + "FP": 507, + "IoU": 0.9250422008303298, + "TN": 887521, + "TP": 20276, + "n_pred": 20783, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5352986811481769, + "FN": 2493, + "FP": 5294, + "IoU": 0.3654661016949153, + "TN": 897168, + "TP": 4485, + "n_pred": 9779, + "n_ref": 6978 + }, + "2": { + "Dice": 0.7023786351072527, + "FN": 5303, + "FP": 2342, + "IoU": 0.5412816512660507, + "TN": 892774, + "TP": 9021, + "n_pred": 11363, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9452510251579297, + "FN": 1576, + "FP": 400, + "IoU": 0.8961857728275717, + "TN": 890406, + "TP": 17058, + "n_pred": 17458, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7782475297755659, + "FN": 8071, + "FP": 1108, + "IoU": 0.6369928023412165, + "TN": 1400474, + "TP": 16107, + "n_pred": 17215, + "n_ref": 24178 + }, + "2": { + "Dice": 0.7236595425571803, + "FN": 5434, + "FP": 1936, + "IoU": 0.5669800235017627, + "TN": 1408740, + "TP": 9650, + "n_pred": 11586, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9426450191727176, + "FN": 2168, + "FP": 644, + "IoU": 0.8915123456790124, + "TN": 1399840, + "TP": 23108, + "n_pred": 23752, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8100426338228328, + "FN": 3870, + "FP": 2546, + "IoU": 0.6807324840764332, + "TN": 1405664, + "TP": 13680, + "n_pred": 16226, + "n_ref": 17550 + }, + "2": { + "Dice": 0.7278513803567463, + "FN": 5234, + "FP": 2120, + "IoU": 0.5721433558296486, + "TN": 1408572, + "TP": 9834, + "n_pred": 11954, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9343788691704499, + "FN": 2324, + "FP": 538, + "IoU": 0.876839659178931, + "TN": 1402522, + "TP": 20376, + "n_pred": 20914, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5961142563046835, + "FN": 4625, + "FP": 1653, + "IoU": 0.4246173586289066, + "TN": 751137, + "TP": 4633, + "n_pred": 6286, + "n_ref": 9258 + }, + "2": { + "Dice": 0.6781637114403692, + "FN": 3826, + "FP": 1474, + "IoU": 0.5130466740169055, + "TN": 751164, + "TP": 5584, + "n_pred": 7058, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9408028611950422, + "FN": 759, + "FP": 1161, + "IoU": 0.88822262327531, + "TN": 744871, + "TP": 15257, + "n_pred": 16418, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5804597701149425, + "FN": 1888, + "FP": 2492, + "IoU": 0.4089068825910931, + "TN": 754638, + "TP": 3030, + "n_pred": 5522, + "n_ref": 4918 + }, + "2": { + "Dice": 0.67753567982122, + "FN": 4568, + "FP": 1781, + "IoU": 0.5123281358015208, + "TN": 749029, + "TP": 6670, + "n_pred": 8451, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9224666108343985, + "FN": 1448, + "FP": 311, + "IoU": 0.8560909760287981, + "TN": 749825, + "TP": 10464, + "n_pred": 10775, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6815827275497323, + "FN": 6015, + "FP": 1300, + "IoU": 0.5169704173269942, + "TN": 1063128, + "TP": 7829, + "n_pred": 9129, + "n_ref": 13844 + }, + "2": { + "Dice": 0.6990844800175429, + "FN": 3494, + "FP": 1995, + "IoU": 0.5373788453434472, + "TN": 1066407, + "TP": 6376, + "n_pred": 8371, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9325193502670882, + "FN": 1296, + "FP": 1180, + "IoU": 0.8735702614379085, + "TN": 1058688, + "TP": 17108, + "n_pred": 18288, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7085236914240961, + "FN": 5154, + "FP": 1545, + "IoU": 0.5486153224176269, + "TN": 1063431, + "TP": 8142, + "n_pred": 9687, + "n_ref": 13296 + }, + "2": { + "Dice": 0.723274901205796, + "FN": 3662, + "FP": 1800, + "IoU": 0.5665079365079365, + "TN": 1065672, + "TP": 7138, + "n_pred": 8938, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9258291982240794, + "FN": 1046, + "FP": 1226, + "IoU": 0.861901288597131, + "TN": 1061820, + "TP": 14180, + "n_pred": 15406, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.62572954178567, + "FN": 4093, + "FP": 1935, + "IoU": 0.45531761091533385, + "TN": 1094853, + "TP": 5039, + "n_pred": 6974, + "n_ref": 9132 + }, + "2": { + "Dice": 0.690164391195319, + "FN": 4051, + "FP": 2621, + "IoU": 0.5269091682620719, + "TN": 1091817, + "TP": 7431, + "n_pred": 10052, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8688776818531498, + "FN": 1331, + "FP": 1737, + "IoU": 0.7681553691528754, + "TN": 1092687, + "TP": 10165, + "n_pred": 11902, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3537165873306481, + "FN": 2086, + "FP": 1444, + "IoU": 0.2148576512455516, + "TN": 1101424, + "TP": 966, + "n_pred": 2410, + "n_ref": 3052 + }, + "2": { + "Dice": 0.7939715704743963, + "FN": 3080, + "FP": 1732, + "IoU": 0.658335700085203, + "TN": 1091836, + "TP": 9272, + "n_pred": 11004, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7103053899501156, + "FN": 361, + "FP": 2020, + "IoU": 0.5507547169811321, + "TN": 1100620, + "TP": 2919, + "n_pred": 4939, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8485187255449972, + "FN": 1574, + "FP": 1136, + "IoU": 0.7368932038834951, + "TN": 1136580, + "TP": 7590, + "n_pred": 8726, + "n_ref": 9164 + }, + "2": { + "Dice": 0.831481892912686, + "FN": 4446, + "FP": 1622, + "IoU": 0.7115695408308774, + "TN": 1125842, + "TP": 14970, + "n_pred": 16592, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9039039039039038, + "FN": 1094, + "FP": 1210, + "IoU": 0.8246575342465754, + "TN": 1133740, + "TP": 10836, + "n_pred": 12046, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2641811986370014, + "FN": 1807, + "FP": 1864, + "IoU": 0.15219399538106235, + "TN": 1142550, + "TP": 659, + "n_pred": 2523, + "n_ref": 2466 + }, + "2": { + "Dice": 0.5121321631388746, + "FN": 15012, + "FP": 2943, + "IoU": 0.34420541290770296, + "TN": 1119501, + "TP": 9424, + "n_pred": 12367, + "n_ref": 24436 + }, + "3": { + "Dice": 0.27797963256742236, + "FN": 0, + "FP": 14109, + "IoU": 0.16142644873699852, + "TN": 1130055, + "TP": 2716, + "n_pred": 16825, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8390813859790491, + "FN": 1433, + "FP": 2561, + "IoU": 0.7227736516970917, + "TN": 786393, + "TP": 10413, + "n_pred": 12974, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8100935908067765, + "FN": 1796, + "FP": 1410, + "IoU": 0.6808044603743528, + "TN": 790756, + "TP": 6838, + "n_pred": 8248, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9447582803115895, + "FN": 709, + "FP": 220, + "IoU": 0.895300349374507, + "TN": 791927, + "TP": 7944, + "n_pred": 8164, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5041178692859841, + "FN": 603, + "FP": 5960, + "IoU": 0.337003737751288, + "TN": 790901, + "TP": 3336, + "n_pred": 9296, + "n_ref": 3939 + }, + "2": { + "Dice": 0.802570042396958, + "FN": 3471, + "FP": 1046, + "IoU": 0.670243831216236, + "TN": 787102, + "TP": 9181, + "n_pred": 10227, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8573258606885509, + "FN": 169, + "FP": 722, + "IoU": 0.7502802690582959, + "TN": 797232, + "TP": 2677, + "n_pred": 3399, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6576576576576577, + "FN": 5724, + "FP": 3092, + "IoU": 0.4899328859060403, + "TN": 1330556, + "TP": 8468, + "n_pred": 11560, + "n_ref": 14192 + }, + "2": { + "Dice": 0.796038987971796, + "FN": 2929, + "FP": 1005, + "IoU": 0.6611833606063215, + "TN": 1336229, + "TP": 7677, + "n_pred": 8682, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9627758420441347, + "FN": 749, + "FP": 533, + "IoU": 0.9282235037231958, + "TN": 1329979, + "TP": 16579, + "n_pred": 17112, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7101290145484491, + "FN": 694, + "FP": 3530, + "IoU": 0.5505426686529049, + "TN": 1338442, + "TP": 5174, + "n_pred": 8704, + "n_ref": 5868 + }, + "2": { + "Dice": 0.7545133072771264, + "FN": 4006, + "FP": 1270, + "IoU": 0.6057979677226539, + "TN": 1334456, + "TP": 8108, + "n_pred": 9378, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9279208267647574, + "FN": 1023, + "FP": 623, + "IoU": 0.8655338616126134, + "TN": 1335599, + "TP": 10595, + "n_pred": 11218, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6822568337896674, + "FN": 4862, + "FP": 2217, + "IoU": 0.5177464404932216, + "TN": 837289, + "TP": 7600, + "n_pred": 9817, + "n_ref": 12462 + }, + "2": { + "Dice": 0.727938764352105, + "FN": 2791, + "FP": 2185, + "IoU": 0.5722513539069888, + "TN": 840335, + "TP": 6657, + "n_pred": 8842, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9323120472899842, + "FN": 1691, + "FP": 748, + "IoU": 0.8732064878353087, + "TN": 832732, + "TP": 16797, + "n_pred": 17545, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6452457109624891, + "FN": 2500, + "FP": 2380, + "IoU": 0.476282464048079, + "TN": 842650, + "TP": 4438, + "n_pred": 6818, + "n_ref": 6938 + }, + "2": { + "Dice": 0.7451151515151515, + "FN": 3608, + "FP": 1649, + "IoU": 0.5937717332509079, + "TN": 839027, + "TP": 7684, + "n_pred": 9333, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9238939435354758, + "FN": 1166, + "FP": 783, + "IoU": 0.8585528703098919, + "TN": 838189, + "TP": 11830, + "n_pred": 12613, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7706571242680547, + "FN": 1118, + "FP": 1702, + "IoU": 0.6268854194231278, + "TN": 844410, + "TP": 4738, + "n_pred": 6440, + "n_ref": 5856 + }, + "2": { + "Dice": 0.7791044776119403, + "FN": 2629, + "FP": 1959, + "IoU": 0.6381418092909535, + "TN": 839289, + "TP": 8091, + "n_pred": 10050, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9150798589504252, + "FN": 1927, + "FP": 120, + "IoU": 0.8434536555521567, + "TN": 838892, + "TP": 11029, + "n_pred": 11149, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5040372670807454, + "FN": 481, + "FP": 2713, + "IoU": 0.3369317002283579, + "TN": 847151, + "TP": 1623, + "n_pred": 4336, + "n_ref": 2104 + }, + "2": { + "Dice": 0.7879771155324055, + "FN": 3358, + "FP": 1608, + "IoU": 0.6501338593772016, + "TN": 837774, + "TP": 9228, + "n_pred": 10836, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9265171968540908, + "FN": 853, + "FP": 399, + "IoU": 0.8630945872061235, + "TN": 842823, + "TP": 7893, + "n_pred": 8292, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5981176884510511, + "FN": 6288, + "FP": 2850, + "IoU": 0.4266532814656795, + "TN": 781102, + "TP": 6800, + "n_pred": 9650, + "n_ref": 13088 + }, + "2": { + "Dice": 0.6555075593952484, + "FN": 3391, + "FP": 2351, + "IoU": 0.4875502008032129, + "TN": 785835, + "TP": 5463, + "n_pred": 7814, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9158577323639222, + "FN": 1806, + "FP": 335, + "IoU": 0.8447763358225187, + "TN": 783247, + "TP": 11652, + "n_pred": 11987, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5569815805109922, + "FN": 2981, + "FP": 4475, + "IoU": 0.3859836943094787, + "TN": 784897, + "TP": 4687, + "n_pred": 9162, + "n_ref": 7668 + }, + "2": { + "Dice": 0.6876399334060509, + "FN": 3633, + "FP": 1808, + "IoU": 0.5239720034995625, + "TN": 785610, + "TP": 5989, + "n_pred": 7797, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9045372473644359, + "FN": 1267, + "FP": 372, + "IoU": 0.825712462781795, + "TN": 787636, + "TP": 7765, + "n_pred": 8137, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6636460554371002, + "FN": 4998, + "FP": 2574, + "IoU": 0.4966094934184284, + "TN": 881628, + "TP": 7470, + "n_pred": 10044, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7002753653886888, + "FN": 3726, + "FP": 1934, + "IoU": 0.538787483702738, + "TN": 884398, + "TP": 6612, + "n_pred": 8546, + "n_ref": 10338 + }, + "3": { + "Dice": 0.8949858810959322, + "FN": 525, + "FP": 2227, + "IoU": 0.8099316251122315, + "TN": 882191, + "TP": 11727, + "n_pred": 13954, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5868965517241379, + "FN": 2101, + "FP": 3889, + "IoU": 0.4153245485602733, + "TN": 886425, + "TP": 4255, + "n_pred": 8144, + "n_ref": 6356 + }, + "2": { + "Dice": 0.7956869822759035, + "FN": 2921, + "FP": 1494, + "IoU": 0.6606978173993237, + "TN": 883658, + "TP": 8597, + "n_pred": 10091, + "n_ref": 11518 + }, + "3": { + "Dice": 0.8844660194174757, + "FN": 627, + "FP": 1515, + "IoU": 0.7928633594429939, + "TN": 886329, + "TP": 8199, + "n_pred": 9714, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.673895501311277, + "FN": 4539, + "FP": 1927, + "IoU": 0.508176770365863, + "TN": 748901, + "TP": 6681, + "n_pred": 8608, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8168718889179984, + "FN": 2617, + "FP": 878, + "IoU": 0.6904340124003543, + "TN": 750758, + "TP": 7795, + "n_pred": 8673, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9570907260601484, + "FN": 343, + "FP": 680, + "IoU": 0.9177123552123552, + "TN": 749616, + "TP": 11409, + "n_pred": 12089, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5772959449598666, + "FN": 1023, + "FP": 3032, + "IoU": 0.40577373974208675, + "TN": 755224, + "TP": 2769, + "n_pred": 5801, + "n_ref": 3792 + }, + "2": { + "Dice": 0.803274809521556, + "FN": 3145, + "FP": 1012, + "IoU": 0.6712274596646631, + "TN": 749404, + "TP": 8487, + "n_pred": 9499, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9087701968531715, + "FN": 394, + "FP": 899, + "IoU": 0.8327945170050434, + "TN": 754315, + "TP": 6440, + "n_pred": 7339, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7740123572364725, + "FN": 1741, + "FP": 1880, + "IoU": 0.631337813072694, + "TN": 985506, + "TP": 6201, + "n_pred": 8081, + "n_ref": 7942 + }, + "2": { + "Dice": 0.6819652120842233, + "FN": 3161, + "FP": 2050, + "IoU": 0.5174106315984441, + "TN": 984530, + "TP": 5587, + "n_pred": 7637, + "n_ref": 8748 + }, + "3": { + "Dice": 0.931380064162621, + "FN": 143, + "FP": 2274, + "IoU": 0.8715727948990436, + "TN": 976508, + "TP": 16403, + "n_pred": 18677, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7191889581043117, + "FN": 298, + "FP": 2001, + "IoU": 0.5615105855426282, + "TN": 990085, + "TP": 2944, + "n_pred": 4945, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7666310921380292, + "FN": 1869, + "FP": 2067, + "IoU": 0.6215748485722526, + "TN": 984927, + "TP": 6465, + "n_pred": 8532, + "n_ref": 8334 + }, + "3": { + "Dice": 0.8923755186721992, + "FN": 291, + "FP": 2199, + "IoU": 0.8056661203465231, + "TN": 982515, + "TP": 10323, + "n_pred": 12522, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7262792645475212, + "FN": 5219, + "FP": 1644, + "IoU": 0.5702029058116233, + "TN": 742048, + "TP": 9105, + "n_pred": 10749, + "n_ref": 14324 + }, + "2": { + "Dice": 0.762138905961893, + "FN": 2612, + "FP": 1258, + "IoU": 0.6156901688182721, + "TN": 747946, + "TP": 6200, + "n_pred": 7458, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9422587756486349, + "FN": 189, + "FP": 1173, + "IoU": 0.8908216432865731, + "TN": 745541, + "TP": 11113, + "n_pred": 12286, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7489951926865789, + "FN": 484, + "FP": 2701, + "IoU": 0.59871487967746, + "TN": 750079, + "TP": 4752, + "n_pred": 7453, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8401001415042996, + "FN": 1614, + "FP": 1324, + "IoU": 0.7242867867867868, + "TN": 747360, + "TP": 7718, + "n_pred": 9042, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8111548954228555, + "FN": 178, + "FP": 1691, + "IoU": 0.6823049464558899, + "TN": 752133, + "TP": 4014, + "n_pred": 5705, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8385330446962944, + "FN": 1361, + "FP": 1175, + "IoU": 0.7219603113693674, + "TN": 629855, + "TP": 6585, + "n_pred": 7760, + "n_ref": 7946 + }, + "2": { + "Dice": 0.7835909631391201, + "FN": 753, + "FP": 1795, + "IoU": 0.6441837732160313, + "TN": 631815, + "TP": 4613, + "n_pred": 6408, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9599387953818334, + "FN": 433, + "FP": 143, + "IoU": 0.9229637555169186, + "TN": 631499, + "TP": 6901, + "n_pred": 7044, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6159670415321233, + "FN": 254, + "FP": 3195, + "IoU": 0.44505229283990344, + "TN": 632761, + "TP": 2766, + "n_pred": 5961, + "n_ref": 3020 + }, + "2": { + "Dice": 0.821939586645469, + "FN": 1148, + "FP": 1540, + "IoU": 0.6977058029689609, + "TN": 630084, + "TP": 6204, + "n_pred": 7744, + "n_ref": 7352 + }, + "3": { + "Dice": 0.8988723823160909, + "FN": 245, + "FP": 320, + "IoU": 0.8163198959687906, + "TN": 635900, + "TP": 2511, + "n_pred": 2831, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5464738598442714, + "FN": 9299, + "FP": 894, + "IoU": 0.37596424635729153, + "TN": 966706, + "TP": 6141, + "n_pred": 7035, + "n_ref": 15440 + }, + "2": { + "Dice": 0.7832590706556334, + "FN": 2513, + "FP": 1573, + "IoU": 0.6437352864242741, + "TN": 971571, + "TP": 7383, + "n_pred": 8956, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9612941350273305, + "FN": 204, + "FP": 844, + "IoU": 0.9254729057033139, + "TN": 968978, + "TP": 13014, + "n_pred": 13858, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.611367394899469, + "FN": 2676, + "FP": 1789, + "IoU": 0.44026576407170614, + "TN": 975063, + "TP": 3512, + "n_pred": 5301, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8026102845210128, + "FN": 2269, + "FP": 1512, + "IoU": 0.6702999651203349, + "TN": 971572, + "TP": 7687, + "n_pred": 9199, + "n_ref": 9956 + }, + "3": { + "Dice": 0.8294656163508622, + "FN": 146, + "FP": 2257, + "IoU": 0.7086213168424882, + "TN": 974793, + "TP": 5844, + "n_pred": 8101, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8518708026862808, + "FN": 2861, + "FP": 1771, + "IoU": 0.7419642359757117, + "TN": 1030625, + "TP": 13319, + "n_pred": 15090, + "n_ref": 16180 + }, + "2": { + "Dice": 0.7590655727437841, + "FN": 2648, + "FP": 1199, + "IoU": 0.6116887049560916, + "TN": 1038669, + "TP": 6060, + "n_pred": 7259, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9255198782724046, + "FN": 399, + "FP": 1510, + "IoU": 0.861365286855483, + "TN": 1034806, + "TP": 11861, + "n_pred": 13371, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6577608142493638, + "FN": 260, + "FP": 5120, + "IoU": 0.4900473933649289, + "TN": 1038026, + "TP": 5170, + "n_pred": 10290, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8114593029268797, + "FN": 2476, + "FP": 1170, + "IoU": 0.6827358162199791, + "TN": 1037084, + "TP": 7846, + "n_pred": 9016, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9137065637065637, + "FN": 347, + "FP": 547, + "IoU": 0.8411231562111249, + "TN": 1042949, + "TP": 4733, + "n_pred": 5280, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.36337074174912015, + "FN": 8426, + "FP": 1161, + "IoU": 0.22202385782682788, + "TN": 476893, + "TP": 2736, + "n_pred": 3897, + "n_ref": 11162 + }, + "2": { + "Dice": 0.46569278441788403, + "FN": 613, + "FP": 4215, + "IoU": 0.3035199076745528, + "TN": 482284, + "TP": 2104, + "n_pred": 6319, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9300512820512821, + "FN": 117, + "FP": 565, + "IoU": 0.8692484662576687, + "TN": 484000, + "TP": 4534, + "n_pred": 5099, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.677938937414857, + "FN": 2421, + "FP": 1598, + "IoU": 0.5127894290216995, + "TN": 480967, + "TP": 4230, + "n_pred": 5828, + "n_ref": 6651 + }, + "2": { + "Dice": 0.6083658928981843, + "FN": 713, + "FP": 2695, + "IoU": 0.43715937241948805, + "TN": 483161, + "TP": 2647, + "n_pred": 5342, + "n_ref": 3360 + }, + "3": { + "Dice": 0.7631055076310551, + "FN": 65, + "FP": 1006, + "IoU": 0.6169527896995708, + "TN": 486420, + "TP": 1725, + "n_pred": 2731, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8643533123028391, + "FN": 3272, + "FP": 684, + "IoU": 0.7611111111111111, + "TN": 463920, + "TP": 12604, + "n_pred": 13288, + "n_ref": 15876 + }, + "2": { + "Dice": 0.6592985814985641, + "FN": 731, + "FP": 3184, + "IoU": 0.49175645852265354, + "TN": 472777, + "TP": 3788, + "n_pred": 6972, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9454049788363584, + "FN": 371, + "FP": 390, + "IoU": 0.8964625850340137, + "TN": 473130, + "TP": 6589, + "n_pred": 6979, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8536357571714477, + "FN": 2014, + "FP": 1277, + "IoU": 0.7446461824953445, + "TN": 467592, + "TP": 9597, + "n_pred": 10874, + "n_ref": 11611 + }, + "2": { + "Dice": 0.608868501529052, + "FN": 1680, + "FP": 3436, + "IoU": 0.43767861068366676, + "TN": 471382, + "TP": 3982, + "n_pred": 7418, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8465757718225984, + "FN": 105, + "FP": 874, + "IoU": 0.7339673913043478, + "TN": 476800, + "TP": 2701, + "n_pred": 3575, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7018012818565658, + "FN": 9120, + "FP": 697, + "IoU": 0.5405961907436005, + "TN": 623271, + "TP": 11552, + "n_pred": 12249, + "n_ref": 20672 + }, + "2": { + "Dice": 0.670247687257535, + "FN": 3451, + "FP": 2074, + "IoU": 0.5040394973070018, + "TN": 633500, + "TP": 5615, + "n_pred": 7689, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9103135567168767, + "FN": 2153, + "FP": 181, + "IoU": 0.8353903660342761, + "TN": 630461, + "TP": 11845, + "n_pred": 12026, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7210004971889701, + "FN": 5906, + "FP": 1389, + "IoU": 0.5637222654147479, + "TN": 627919, + "TP": 9426, + "n_pred": 10815, + "n_ref": 15332 + }, + "2": { + "Dice": 0.7412731006160165, + "FN": 4224, + "FP": 1320, + "IoU": 0.5889070146818923, + "TN": 631154, + "TP": 7942, + "n_pred": 9262, + "n_ref": 12166 + }, + "3": { + "Dice": 0.8758387032485219, + "FN": 970, + "FP": 899, + "IoU": 0.7791041248079423, + "TN": 636179, + "TP": 6592, + "n_pred": 7491, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6965366021187225, + "FN": 8869, + "FP": 2618, + "IoU": 0.5343737332792866, + "TN": 539810, + "TP": 13183, + "n_pred": 15801, + "n_ref": 22052 + }, + "2": { + "Dice": 0.5511601369341955, + "FN": 1571, + "FP": 3149, + "IoU": 0.3804148070359675, + "TN": 556862, + "TP": 2898, + "n_pred": 6047, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9297946287519747, + "FN": 540, + "FP": 571, + "IoU": 0.8688001889466226, + "TN": 556012, + "TP": 7357, + "n_pred": 7928, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6494142003481861, + "FN": 1531, + "FP": 5920, + "IoU": 0.48083890746934227, + "TN": 550128, + "TP": 6901, + "n_pred": 12821, + "n_ref": 8432 + }, + "2": { + "Dice": 0.7010659371757382, + "FN": 1147, + "FP": 2022, + "IoU": 0.5397240377632534, + "TN": 557595, + "TP": 3716, + "n_pred": 5738, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8649289099526066, + "FN": 167, + "FP": 859, + "IoU": 0.7620041753653445, + "TN": 560169, + "TP": 3285, + "n_pred": 4144, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2414309795841918, + "FN": 6286, + "FP": 1814, + "IoU": 0.13728831611460218, + "TN": 409491, + "TP": 1289, + "n_pred": 3103, + "n_ref": 7575 + }, + "2": { + "Dice": 0.033608658501851324, + "FN": 2738, + "FP": 4048, + "IoU": 0.017091541135573582, + "TN": 411976, + "TP": 118, + "n_pred": 4166, + "n_ref": 2856 + }, + "3": { + "Dice": 0.25024533856722275, + "FN": 3434, + "FP": 1150, + "IoU": 0.1430173864273696, + "TN": 413531, + "TP": 765, + "n_pred": 1915, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.30234515935057127, + "FN": 3480, + "FP": 2321, + "IoU": 0.1780957778407481, + "TN": 411822, + "TP": 1257, + "n_pred": 3578, + "n_ref": 4737 + }, + "2": { + "Dice": 0.051395197923426346, + "FN": 2795, + "FP": 4514, + "IoU": 0.02637538297588917, + "TN": 411373, + "TP": 198, + "n_pred": 4712, + "n_ref": 2993 + }, + "3": { + "Dice": 0.3617559181797288, + "FN": 1596, + "FP": 1181, + "IoU": 0.22081930415263748, + "TN": 415316, + "TP": 787, + "n_pred": 1968, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.759575629924331, + "FN": 3829, + "FP": 2335, + "IoU": 0.6123514244387146, + "TN": 480609, + "TP": 9737, + "n_pred": 12072, + "n_ref": 13566 + }, + "2": { + "Dice": 0.7221466551255101, + "FN": 1832, + "FP": 2662, + "IoU": 0.5651248306560867, + "TN": 486176, + "TP": 5840, + "n_pred": 8502, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9351385390428212, + "FN": 347, + "FP": 683, + "IoU": 0.8781785925487877, + "TN": 488055, + "TP": 7425, + "n_pred": 8108, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7238415097357163, + "FN": 4210, + "FP": 2697, + "IoU": 0.5672034588633373, + "TN": 480551, + "TP": 9052, + "n_pred": 11749, + "n_ref": 13262 + }, + "2": { + "Dice": 0.7854051454676605, + "FN": 1943, + "FP": 1627, + "IoU": 0.6466396119964367, + "TN": 486407, + "TP": 6533, + "n_pred": 8160, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8684420772303595, + "FN": 139, + "FP": 849, + "IoU": 0.7674746999293951, + "TN": 492261, + "TP": 3261, + "n_pred": 4110, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_003/summary_cross_val.json b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_003/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..f1afbfea21b3839836858cc81241576526d44a68 --- /dev/null +++ b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_003/summary_cross_val.json @@ -0,0 +1,3048 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.5459548097832042, + "FN": 17.458333333333332, + "FP": 32.041666666666664, + "IoU": 0.4830181492217485, + "TN": 770.5, + "TP": 80.0, + "n_pred": 112.04166666666667, + "n_ref": 97.45833333333333 + }, + "mean": { + "1": { + "Dice": 0.3325940606171711, + "FN": 27.5625, + "FP": 60.1875, + "IoU": 0.2832445754132597, + "TN": 730.4375, + "TP": 81.8125, + "n_pred": 142.0, + "n_ref": 109.375 + }, + "2": { + "Dice": 0.5554689968228376, + "FN": 22.125, + "FP": 20.1875, + "IoU": 0.4791424415814694, + "TN": 777.9375, + "TP": 79.75, + "n_pred": 99.9375, + "n_ref": 101.875 + }, + "3": { + "Dice": 0.7498013719096038, + "FN": 2.6875, + "FP": 15.75, + "IoU": 0.6866674306705164, + "TN": 803.125, + "TP": 78.4375, + "n_pred": 94.1875, + "n_ref": 81.125 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9860583016476553, + "FN": 0, + "FP": 22, + "IoU": 0.9725, + "TN": 0, + "TP": 778, + "n_pred": 800, + "n_ref": 778 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6574154379878577, + "FN": 395, + "FP": 0, + "IoU": 0.4896640826873385, + "TN": 26, + "TP": 379, + "n_pred": 379, + "n_ref": 774 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 1594, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 17, + "IoU": 0.0, + "TN": 1583, + "TP": 0, + "n_pred": 17, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 5, + "IoU": 0.0, + "TN": 1589, + "TP": 0, + "n_pred": 5, + "n_ref": 6 + }, + "2": { + "Dice": 0.40347826086956523, + "FN": 152, + "FP": 191, + "IoU": 0.25272331154684097, + "TN": 1141, + "TP": 116, + "n_pred": 307, + "n_ref": 268 + }, + "3": { + "Dice": 0.7924016282225237, + "FN": 0, + "FP": 153, + "IoU": 0.6561797752808989, + "TN": 1155, + "TP": 292, + "n_pred": 445, + "n_ref": 292 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 16, + "IoU": 0.0, + "TN": 784, + "TP": 0, + "n_pred": 16, + "n_ref": 0 + }, + "2": { + "Dice": 0.8517241379310345, + "FN": 53, + "FP": 33, + "IoU": 0.7417417417417418, + "TN": 467, + "TP": 247, + "n_pred": 280, + "n_ref": 300 + }, + "3": { + "Dice": 0.958659217877095, + "FN": 11, + "FP": 26, + "IoU": 0.9206008583690987, + "TN": 334, + "TP": 429, + "n_pred": 455, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6846846846846847, + "FN": 40, + "FP": 100, + "IoU": 0.5205479452054794, + "TN": 508, + "TP": 152, + "n_pred": 252, + "n_ref": 192 + }, + "2": { + "Dice": 0.8502202643171806, + "FN": 17, + "FP": 51, + "IoU": 0.7394636015325671, + "TN": 539, + "TP": 193, + "n_pred": 244, + "n_ref": 210 + }, + "3": { + "Dice": 0.9681818181818181, + "FN": 5, + "FP": 9, + "IoU": 0.9383259911894273, + "TN": 573, + "TP": 213, + "n_pred": 222, + "n_ref": 218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 414, + "IoU": 0.0, + "TN": 386, + "TP": 0, + "n_pred": 414, + "n_ref": 0 + }, + "2": { + "Dice": 0.8280961182994455, + "FN": 80, + "FP": 13, + "IoU": 0.7066246056782335, + "TN": 483, + "TP": 224, + "n_pred": 237, + "n_ref": 304 + }, + "3": { + "Dice": 0.8636363636363636, + "FN": 4, + "FP": 32, + "IoU": 0.76, + "TN": 650, + "TP": 114, + "n_pred": 146, + "n_ref": 118 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9547641963426372, + "FN": 18, + "FP": 29, + "IoU": 0.9134438305709024, + "TN": 257, + "TP": 496, + "n_pred": 525, + "n_ref": 514 + }, + "3": { + "Dice": 0.915929203539823, + "FN": 23, + "FP": 15, + "IoU": 0.8448979591836735, + "TN": 555, + "TP": 207, + "n_pred": 222, + "n_ref": 230 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 406, + "IoU": 0.0, + "TN": 394, + "TP": 0, + "n_pred": 406, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 34, + "FP": 0, + "IoU": 0.0, + "TN": 766, + "TP": 0, + "n_pred": 0, + "n_ref": 34 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.5665036793585102, + "FN": 31.822222222222223, + "FP": 26.355555555555554, + "IoU": 0.5085644174171476, + "TN": 921.3777777777777, + "TP": 140.44444444444443, + "n_pred": 166.8, + "n_ref": 172.26666666666665 + }, + "mean": { + "1": { + "Dice": 0.3688142051658808, + "FN": 0.8666666666666667, + "FP": 55.4, + "IoU": 0.33009557726024114, + "TN": 972.8666666666667, + "TP": 90.86666666666666, + "n_pred": 146.26666666666668, + "n_ref": 91.73333333333333 + }, + "2": { + "Dice": 0.5658607962740869, + "FN": 31.6, + "FP": 20.733333333333334, + "IoU": 0.4814873174379249, + "TN": 996.1333333333333, + "TP": 71.53333333333333, + "n_pred": 92.26666666666667, + "n_ref": 103.13333333333334 + }, + "3": { + "Dice": 0.7648360366355627, + "FN": 63.0, + "FP": 2.933333333333333, + "IoU": 0.7141103575532767, + "TN": 795.1333333333333, + "TP": 258.93333333333334, + "n_pred": 261.8666666666667, + "n_ref": 321.93333333333334 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 2, + "FP": 0, + "IoU": 0.0, + "TN": 2398, + "TP": 0, + "n_pred": 0, + "n_ref": 2 + }, + "2": { + "Dice": 0.9859154929577465, + "FN": 3, + "FP": 2, + "IoU": 0.9722222222222222, + "TN": 2220, + "TP": 175, + "n_pred": 177, + "n_ref": 178 + }, + "3": { + "Dice": 0.9989447766443897, + "FN": 0, + "FP": 3, + "IoU": 0.9978917779339423, + "TN": 977, + "TP": 1420, + "n_pred": 1423, + "n_ref": 1420 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8970099667774086, + "FN": 11, + "FP": 20, + "IoU": 0.8132530120481928, + "TN": 634, + "TP": 135, + "n_pred": 155, + "n_ref": 146 + }, + "3": { + "Dice": 0.9836575875486381, + "FN": 10, + "FP": 11, + "IoU": 0.9678407350689127, + "TN": 147, + "TP": 632, + "n_pred": 643, + "n_ref": 642 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.543859649122807, + "FN": 4, + "FP": 100, + "IoU": 0.37349397590361444, + "TN": 634, + "TP": 62, + "n_pred": 162, + "n_ref": 66 + }, + "3": { + "Dice": 0.9266862170087976, + "FN": 100, + "FP": 0, + "IoU": 0.8633879781420765, + "TN": 68, + "TP": 632, + "n_pred": 632, + "n_ref": 732 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 213, + "IoU": 0.0, + "TN": 1387, + "TP": 0, + "n_pred": 213, + "n_ref": 0 + }, + "2": { + "Dice": 0.27672955974842767, + "FN": 116, + "FP": 114, + "IoU": 0.16058394160583941, + "TN": 1326, + "TP": 44, + "n_pred": 158, + "n_ref": 160 + }, + "3": { + "Dice": 0.5691231845077999, + "FN": 801, + "FP": 0, + "IoU": 0.3977443609022556, + "TN": 270, + "TP": 529, + "n_pred": 529, + "n_ref": 1330 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 296, + "IoU": 0.0, + "TN": 2104, + "TP": 0, + "n_pred": 296, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 36, + "IoU": 0.0, + "TN": 2364, + "TP": 0, + "n_pred": 36, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.05454545454545454, + "FN": 0, + "FP": 208, + "IoU": 0.028037383177570093, + "TN": 586, + "TP": 6, + "n_pred": 214, + "n_ref": 6 + }, + "2": { + "Dice": 0.7096045197740113, + "FN": 226, + "FP": 31, + "IoU": 0.5499124343257443, + "TN": 229, + "TP": 314, + "n_pred": 345, + "n_ref": 540 + }, + "3": { + "Dice": 0.8938906752411575, + "FN": 31, + "FP": 2, + "IoU": 0.8081395348837209, + "TN": 628, + "TP": 139, + "n_pred": 141, + "n_ref": 170 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6086956521739131, + "FN": 0, + "FP": 18, + "IoU": 0.4375, + "TN": 768, + "TP": 14, + "n_pred": 32, + "n_ref": 14 + }, + "2": { + "Dice": 0.9191489361702128, + "FN": 35, + "FP": 3, + "IoU": 0.8503937007874016, + "TN": 546, + "TP": 216, + "n_pred": 219, + "n_ref": 251 + }, + "3": { + "Dice": 0.981549815498155, + "FN": 3, + "FP": 17, + "IoU": 0.9637681159420289, + "TN": 248, + "TP": 532, + "n_pred": 549, + "n_ref": 535 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9365461847389558, + "FN": 11, + "FP": 68, + "IoU": 0.8806646525679759, + "TN": 938, + "TP": 583, + "n_pred": 651, + "n_ref": 594 + }, + "2": { + "Dice": 0.7604790419161677, + "FN": 79, + "FP": 1, + "IoU": 0.6135265700483091, + "TN": 1393, + "TP": 127, + "n_pred": 128, + "n_ref": 206 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 1589, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9819121447028424, + "FN": 0, + "FP": 28, + "IoU": 0.9644670050761421, + "TN": 12, + "TP": 760, + "n_pred": 788, + "n_ref": 760 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 796, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame12.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.6259534691574874, + "FN": 61.97777777777778, + "FP": 32.02222222222222, + "IoU": 0.5259957903736506, + "TN": 1109.4666666666665, + "TP": 183.20000000000002, + "n_pred": 215.22222222222226, + "n_ref": 245.17777777777778 + }, + "mean": { + "1": { + "Dice": 0.5268542942338227, + "FN": 94.6, + "FP": 11.4, + "IoU": 0.42500006921669364, + "TN": 1170.0666666666666, + "TP": 110.6, + "n_pred": 122.0, + "n_ref": 205.2 + }, + "2": { + "Dice": 0.5654511427813235, + "FN": 72.33333333333333, + "FP": 20.8, + "IoU": 0.4394174424509069, + "TN": 1197.3333333333333, + "TP": 96.2, + "n_pred": 117.0, + "n_ref": 168.53333333333333 + }, + "3": { + "Dice": 0.7855549704573158, + "FN": 19.0, + "FP": 63.86666666666667, + "IoU": 0.7135698594533513, + "TN": 961.0, + "TP": 342.8, + "n_pred": 406.6666666666667, + "n_ref": 361.8 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.32340425531914896, + "FN": 126, + "FP": 33, + "IoU": 0.19289340101522842, + "TN": 3003, + "TP": 38, + "n_pred": 71, + "n_ref": 164 + }, + "3": { + "Dice": 0.9694189602446484, + "FN": 80, + "FP": 0, + "IoU": 0.9406528189910979, + "TN": 1852, + "TP": 1268, + "n_pred": 1268, + "n_ref": 1348 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8275862068965517, + "FN": 4, + "FP": 1, + "IoU": 0.7058823529411765, + "TN": 783, + "TP": 12, + "n_pred": 13, + "n_ref": 16 + }, + "3": { + "Dice": 0.9968173138128581, + "FN": 1, + "FP": 4, + "IoU": 0.9936548223350253, + "TN": 12, + "TP": 783, + "n_pred": 787, + "n_ref": 784 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8291171915332989, + "FN": 331, + "FP": 0, + "IoU": 0.7081128747795414, + "TN": 1266, + "TP": 803, + "n_pred": 803, + "n_ref": 1134 + }, + "2": { + "Dice": 0.5714285714285714, + "FN": 134, + "FP": 10, + "IoU": 0.4, + "TN": 2160, + "TP": 96, + "n_pred": 106, + "n_ref": 230 + }, + "3": { + "Dice": 0.8981481481481481, + "FN": 0, + "FP": 132, + "IoU": 0.8151260504201681, + "TN": 1686, + "TP": 582, + "n_pred": 714, + "n_ref": 582 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 140, + "IoU": 0.0, + "TN": 3060, + "TP": 0, + "n_pred": 140, + "n_ref": 0 + }, + "2": { + "Dice": 0.749003984063745, + "FN": 124, + "FP": 65, + "IoU": 0.5987261146496815, + "TN": 2729, + "TP": 282, + "n_pred": 347, + "n_ref": 406 + }, + "3": { + "Dice": 0.8593530239099859, + "FN": 91, + "FP": 109, + "IoU": 0.7533908754623921, + "TN": 2389, + "TP": 611, + "n_pred": 720, + "n_ref": 702 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8362427265170407, + "FN": 197, + "FP": 0, + "IoU": 0.7185714285714285, + "TN": 1700, + "TP": 503, + "n_pred": 503, + "n_ref": 700 + }, + "3": { + "Dice": 0.5291005291005291, + "FN": 0, + "FP": 178, + "IoU": 0.3597122302158273, + "TN": 2122, + "TP": 100, + "n_pred": 278, + "n_ref": 100 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.48, + "FN": 0, + "FP": 26, + "IoU": 0.3157894736842105, + "TN": 762, + "TP": 12, + "n_pred": 38, + "n_ref": 12 + }, + "3": { + "Dice": 0.983225806451613, + "FN": 26, + "FP": 0, + "IoU": 0.9670050761421319, + "TN": 12, + "TP": 762, + "n_pred": 762, + "n_ref": 788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4074074074074074, + "FN": 1, + "FP": 31, + "IoU": 0.2558139534883721, + "TN": 757, + "TP": 11, + "n_pred": 42, + "n_ref": 12 + }, + "2": { + "Dice": 0.3166023166023166, + "FN": 350, + "FP": 4, + "IoU": 0.18807339449541285, + "TN": 364, + "TP": 82, + "n_pred": 86, + "n_ref": 432 + }, + "3": { + "Dice": 0.7272727272727273, + "FN": 4, + "FP": 2, + "IoU": 0.5714285714285714, + "TN": 786, + "TP": 8, + "n_pred": 10, + "n_ref": 12 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 0, + "TP": 800, + "n_pred": 800, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9144981412639405, + "FN": 69, + "FP": 0, + "IoU": 0.8424657534246576, + "TN": 362, + "TP": 369, + "n_pred": 369, + "n_ref": 438 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8980891719745223, + "FN": 34, + "FP": 30, + "IoU": 0.815028901734104, + "TN": 454, + "TP": 282, + "n_pred": 312, + "n_ref": 316 + }, + "3": { + "Dice": 0.875, + "FN": 26, + "FP": 6, + "IoU": 0.7777777777777778, + "TN": 656, + "TP": 112, + "n_pred": 118, + "n_ref": 138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.483248730964467, + "FN": 1018, + "FP": 0, + "IoU": 0.31860776439089694, + "TN": 106, + "TP": 476, + "n_pred": 476, + "n_ref": 1494 + }, + "2": { + "Dice": 0.044444444444444446, + "FN": 0, + "FP": 86, + "IoU": 0.022727272727272728, + "TN": 1512, + "TP": 2, + "n_pred": 88, + "n_ref": 2 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 527, + "IoU": 0.0, + "TN": 1073, + "TP": 0, + "n_pred": 527, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6077097505668935, + "FN": 116, + "FP": 57, + "IoU": 0.4364820846905538, + "TN": 493, + "TP": 134, + "n_pred": 191, + "n_ref": 250 + }, + "3": { + "Dice": 0.8027681660899654, + "FN": 57, + "FP": 0, + "IoU": 0.6705202312138728, + "TN": 627, + "TP": 116, + "n_pred": 116, + "n_ref": 173 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.4707959695889943, + "FN": 54.644444444444446, + "FP": 51.288888888888884, + "IoU": 0.38209286185812524, + "TN": 1131.711111111111, + "TP": 95.68888888888888, + "n_pred": 146.9777777777778, + "n_ref": 150.33333333333334 + }, + "mean": { + "1": { + "Dice": 0.2924726641007396, + "FN": 83.93333333333334, + "FP": 72.6, + "IoU": 0.21722398739683507, + "TN": 1101.3333333333333, + "TP": 75.46666666666667, + "n_pred": 148.06666666666666, + "n_ref": 159.4 + }, + "2": { + "Dice": 0.4943826817991767, + "FN": 43.06666666666667, + "FP": 39.6, + "IoU": 0.400894708909596, + "TN": 1184.2666666666667, + "TP": 66.4, + "n_pred": 106.0, + "n_ref": 109.46666666666667 + }, + "3": { + "Dice": 0.6255325628670665, + "FN": 36.93333333333333, + "FP": 41.666666666666664, + "IoU": 0.5281598892679445, + "TN": 1109.5333333333333, + "TP": 145.2, + "n_pred": 186.86666666666667, + "n_ref": 182.13333333333333 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 0, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 0, + "n_ref": 6 + }, + "2": { + "Dice": 0.8782608695652174, + "FN": 15, + "FP": 13, + "IoU": 0.7829457364341085, + "TN": 671, + "TP": 101, + "n_pred": 114, + "n_ref": 116 + }, + "3": { + "Dice": 0.983751846381093, + "FN": 12, + "FP": 10, + "IoU": 0.9680232558139535, + "TN": 112, + "TP": 666, + "n_pred": 676, + "n_ref": 678 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7132867132867133, + "FN": 39, + "FP": 2, + "IoU": 0.5543478260869565, + "TN": 708, + "TP": 51, + "n_pred": 53, + "n_ref": 90 + }, + "3": { + "Dice": 0.9867595818815331, + "FN": 2, + "FP": 17, + "IoU": 0.9738651994497937, + "TN": 73, + "TP": 708, + "n_pred": 725, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.18434343434343434, + "FN": 19, + "FP": 627, + "IoU": 0.10152990264255911, + "TN": 1681, + "TP": 73, + "n_pred": 700, + "n_ref": 92 + }, + "2": { + "Dice": 0.8279883381924198, + "FN": 0, + "FP": 177, + "IoU": 0.7064676616915423, + "TN": 1797, + "TP": 426, + "n_pred": 603, + "n_ref": 426 + }, + "3": { + "Dice": 0.6900175131348512, + "FN": 177, + "FP": 0, + "IoU": 0.5267379679144385, + "TN": 2026, + "TP": 197, + "n_pred": 197, + "n_ref": 374 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.24705882352941178, + "FN": 115, + "FP": 13, + "IoU": 0.14093959731543623, + "TN": 1451, + "TP": 21, + "n_pred": 34, + "n_ref": 136 + }, + "2": { + "Dice": 0.15873015873015872, + "FN": 301, + "FP": 70, + "IoU": 0.08620689655172414, + "TN": 1194, + "TP": 35, + "n_pred": 105, + "n_ref": 336 + }, + "3": { + "Dice": 0.3788300835654596, + "FN": 0, + "FP": 446, + "IoU": 0.23367697594501718, + "TN": 1018, + "TP": 136, + "n_pred": 582, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 340, + "IoU": 0.0, + "TN": 460, + "TP": 0, + "n_pred": 340, + "n_ref": 0 + }, + "2": { + "Dice": 0.5909090909090909, + "FN": 20, + "FP": 16, + "IoU": 0.41935483870967744, + "TN": 738, + "TP": 26, + "n_pred": 42, + "n_ref": 46 + }, + "3": { + "Dice": 0.6486486486486487, + "FN": 0, + "FP": 26, + "IoU": 0.48, + "TN": 750, + "TP": 24, + "n_pred": 50, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 793, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.44280442804428044, + "FN": 116, + "FP": 35, + "IoU": 0.2843601895734597, + "TN": 589, + "TP": 60, + "n_pred": 95, + "n_ref": 176 + }, + "3": { + "Dice": 0.849772382397572, + "FN": 0, + "FP": 99, + "IoU": 0.7387862796833773, + "TN": 421, + "TP": 280, + "n_pred": 379, + "n_ref": 280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5792610250297974, + "FN": 339, + "FP": 14, + "IoU": 0.4077181208053691, + "TN": 204, + "TP": 243, + "n_pred": 257, + "n_ref": 582 + }, + "2": { + "Dice": 0.9313725490196079, + "FN": 20, + "FP": 8, + "IoU": 0.8715596330275229, + "TN": 582, + "TP": 190, + "n_pred": 198, + "n_ref": 210 + }, + "3": { + "Dice": 0.0, + "FN": 8, + "FP": 0, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 0, + "n_ref": 8 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.14351851851851852, + "FN": 360, + "FP": 10, + "IoU": 0.0773067331670823, + "TN": 1999, + "TP": 31, + "n_pred": 41, + "n_ref": 391 + }, + "2": { + "Dice": 0.5441696113074205, + "FN": 124, + "FP": 5, + "IoU": 0.3737864077669903, + "TN": 2194, + "TP": 77, + "n_pred": 82, + "n_ref": 201 + }, + "3": { + "Dice": 0.4664804469273743, + "FN": 355, + "FP": 27, + "IoU": 0.30418943533697634, + "TN": 1851, + "TP": 167, + "n_pred": 194, + "n_ref": 522 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5739130434782609, + "FN": 386, + "FP": 6, + "IoU": 0.4024390243902439, + "TN": 1744, + "TP": 264, + "n_pred": 270, + "n_ref": 650 + }, + "2": { + "Dice": 0.8450704225352113, + "FN": 11, + "FP": 0, + "IoU": 0.7317073170731707, + "TN": 2359, + "TP": 30, + "n_pred": 30, + "n_ref": 41 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9041591320072333, + "FN": 34, + "FP": 72, + "IoU": 0.8250825082508251, + "TN": 994, + "TP": 500, + "n_pred": 572, + "n_ref": 534 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 81, + "IoU": 0.0, + "TN": 1519, + "TP": 0, + "n_pred": 81, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 147, + "IoU": 0.0, + "TN": 653, + "TP": 0, + "n_pred": 147, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 40, + "IoU": 0.0, + "TN": 760, + "TP": 0, + "n_pred": 40, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.5598736065083764, + "FN": 16.333333333333332, + "FP": 66.58333333333333, + "IoU": 0.4942811997284832, + "TN": 1302.1666666666667, + "TP": 114.91666666666667, + "n_pred": 181.5, + "n_ref": 131.25 + }, + "mean": { + "1": { + "Dice": 0.35440621395599525, + "FN": 15.3125, + "FP": 110.1875, + "IoU": 0.30600489061723224, + "TN": 1271.1875, + "TP": 103.3125, + "n_pred": 213.5, + "n_ref": 118.625 + }, + "2": { + "Dice": 0.5177439676839122, + "FN": 28.5625, + "FP": 29.75, + "IoU": 0.42375060251701413, + "TN": 1353.25, + "TP": 88.4375, + "n_pred": 118.1875, + "n_ref": 117.0 + }, + "3": { + "Dice": 0.8074706378852217, + "FN": 5.125, + "FP": 59.8125, + "IoU": 0.7530881060512034, + "TN": 1282.0625, + "TP": 153.0, + "n_pred": 212.8125, + "n_ref": 158.125 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 702, + "IoU": 0.0, + "TN": 1698, + "TP": 0, + "n_pred": 702, + "n_ref": 0 + }, + "2": { + "Dice": 0.2047244094488189, + "FN": 200, + "FP": 2, + "IoU": 0.11403508771929824, + "TN": 2172, + "TP": 26, + "n_pred": 28, + "n_ref": 226 + }, + "3": { + "Dice": 0.9132947976878613, + "FN": 30, + "FP": 0, + "IoU": 0.8404255319148937, + "TN": 2212, + "TP": 158, + "n_pred": 158, + "n_ref": 188 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6491228070175439, + "FN": 21, + "FP": 19, + "IoU": 0.4805194805194805, + "TN": 1523, + "TP": 37, + "n_pred": 56, + "n_ref": 58 + }, + "3": { + "Dice": 0.9772570640937285, + "FN": 25, + "FP": 8, + "IoU": 0.9555256064690026, + "TN": 858, + "TP": 709, + "n_pred": 717, + "n_ref": 734 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 2394, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": 0.2594594594594595, + "FN": 0, + "FP": 137, + "IoU": 0.14906832298136646, + "TN": 2239, + "TP": 24, + "n_pred": 161, + "n_ref": 24 + }, + "3": { + "Dice": 0.8073490813648294, + "FN": 7, + "FP": 360, + "IoU": 0.6769366197183099, + "TN": 1264, + "TP": 769, + "n_pred": 1129, + "n_ref": 776 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9432943294329433, + "FN": 0, + "FP": 63, + "IoU": 0.8926746166950597, + "TN": 213, + "TP": 524, + "n_pred": 587, + "n_ref": 524 + }, + "2": { + "Dice": 0.8011204481792717, + "FN": 65, + "FP": 6, + "IoU": 0.6682242990654206, + "TN": 586, + "TP": 143, + "n_pred": 149, + "n_ref": 208 + }, + "3": { + "Dice": 0.9393939393939394, + "FN": 6, + "FP": 2, + "IoU": 0.8857142857142857, + "TN": 730, + "TP": 62, + "n_pred": 64, + "n_ref": 68 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7120181405895691, + "FN": 238, + "FP": 16, + "IoU": 0.5528169014084507, + "TN": 1832, + "TP": 314, + "n_pred": 330, + "n_ref": 552 + }, + "2": { + "Dice": 0.6282722513089005, + "FN": 62, + "FP": 151, + "IoU": 0.4580152671755725, + "TN": 2007, + "TP": 180, + "n_pred": 331, + "n_ref": 242 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 494, + "IoU": 0.0, + "TN": 1906, + "TP": 0, + "n_pred": 494, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 796, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + }, + "2": { + "Dice": 0.900117508813161, + "FN": 11, + "FP": 74, + "IoU": 0.8183760683760684, + "TN": 332, + "TP": 383, + "n_pred": 457, + "n_ref": 394 + }, + "3": { + "Dice": 0.9611307420494699, + "FN": 0, + "FP": 11, + "IoU": 0.9251700680272109, + "TN": 653, + "TP": 136, + "n_pred": 147, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 767, + "IoU": 0.0, + "TN": 33, + "TP": 0, + "n_pred": 767, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 796, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.36363636363636365, + "FN": 0, + "FP": 7, + "IoU": 0.2222222222222222, + "TN": 791, + "TP": 2, + "n_pred": 9, + "n_ref": 2 + }, + "2": { + "Dice": 0.7869918699186992, + "FN": 68, + "FP": 63, + "IoU": 0.6487935656836461, + "TN": 427, + "TP": 242, + "n_pred": 305, + "n_ref": 310 + }, + "3": { + "Dice": 0.92152466367713, + "FN": 9, + "FP": 61, + "IoU": 0.8544698544698545, + "TN": 319, + "TP": 411, + "n_pred": 472, + "n_ref": 420 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.17573221757322174, + "FN": 7, + "FP": 190, + "IoU": 0.0963302752293578, + "TN": 2982, + "TP": 21, + "n_pred": 211, + "n_ref": 28 + }, + "2": { + "Dice": 0.9476309226932669, + "FN": 22, + "FP": 20, + "IoU": 0.9004739336492891, + "TN": 2778, + "TP": 380, + "n_pred": 400, + "n_ref": 402 + }, + "3": { + "Dice": 0.9398148148148148, + "FN": 5, + "FP": 21, + "IoU": 0.8864628820960698, + "TN": 2971, + "TP": 203, + "n_pred": 224, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9949748743718593, + "FN": 0, + "FP": 8, + "IoU": 0.99, + "TN": 0, + "TP": 792, + "n_pred": 800, + "n_ref": 792 + }, + "2": { + "Dice": 0.0, + "FN": 8, + "FP": 0, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 0, + "n_ref": 8 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2855410/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.5538163068793145, + "FN": 36.44722222222222, + "FP": 41.658333333333324, + "IoU": 0.4787904837198311, + "TN": 1047.0444444444443, + "TP": 122.85, + "n_pred": 164.50833333333335, + "n_ref": 159.29722222222222 + }, + "mean": { + "1": { + "Dice": 0.3750282876147219, + "FN": 44.455, + "FP": 61.955, + "IoU": 0.31231381998085234, + "TN": 1049.1783333333333, + "TP": 92.41166666666668, + "n_pred": 154.36666666666665, + "n_ref": 136.86666666666667 + }, + "2": { + "Dice": 0.5397815170722673, + "FN": 39.5375, + "FP": 26.214166666666664, + "IoU": 0.4449385025793823, + "TN": 1101.7841666666666, + "TP": 80.46416666666667, + "n_pred": 106.67833333333333, + "n_ref": 120.00166666666667 + }, + "3": { + "Dice": 0.7466391159509541, + "FN": 25.34916666666667, + "FP": 36.80583333333333, + "IoU": 0.6791191285992585, + "TN": 990.1708333333332, + "TP": 195.67416666666668, + "n_pred": 232.48000000000002, + "n_ref": 221.02333333333337 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_004/summary.json b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_004/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..d89fdd6aade11bf9b255f208004e881354fb28cc --- /dev/null +++ b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_004/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.7801999619953112, + "FN": 2299.8733333333334, + "FP": 1489.0600000000002, + "IoU": 0.6592913012466803, + "TN": 842745.4666666667, + "TP": 7894.240000000001, + "n_pred": 9383.300000000001, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.7109043025528622, + "FN": 3292.94, + "FP": 1606.9, + "IoU": 0.5603085336821243, + "TN": 842967.68, + "TP": 6561.12, + "n_pred": 8168.02, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.7349563349959013, + "FN": 2774.14, + "FP": 1912.76, + "IoU": 0.5955056668194636, + "TN": 842460.38, + "TP": 7281.36, + "n_pred": 9194.12, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.89473924843717, + "FN": 832.54, + "FP": 947.52, + "IoU": 0.8220597032384531, + "TN": 842808.34, + "TP": 9840.24, + "n_pred": 10787.76, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.739400535074593, + "FN": 3293, + "FP": 2454, + "IoU": 0.5865467625899281, + "TN": 1092020, + "TP": 8153, + "n_pred": 10607, + "n_ref": 11446 + }, + "2": { + "Dice": 0.7868788364546272, + "FN": 3393, + "FP": 2058, + "IoU": 0.6486399381204073, + "TN": 1090406, + "TP": 10063, + "n_pred": 12121, + "n_ref": 13456 + }, + "3": { + "Dice": 0.92382796407679, + "FN": 1783, + "FP": 1915, + "IoU": 0.8584389235539562, + "TN": 1079797, + "TP": 22425, + "n_pred": 24340, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7198248905565978, + "FN": 274, + "FP": 3310, + "IoU": 0.5622862725940401, + "TN": 1097732, + "TP": 4604, + "n_pred": 7914, + "n_ref": 4878 + }, + "2": { + "Dice": 0.7912999494183106, + "FN": 4247, + "FP": 1942, + "IoU": 0.6546702376966856, + "TN": 1087998, + "TP": 11733, + "n_pred": 13675, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9045591722353956, + "FN": 1697, + "FP": 1845, + "IoU": 0.8257490037880652, + "TN": 1085593, + "TP": 16785, + "n_pred": 18630, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8463871543264943, + "FN": 1754, + "FP": 829, + "IoU": 0.7336838849365914, + "TN": 899741, + "TP": 7116, + "n_pred": 7945, + "n_ref": 8870 + }, + "2": { + "Dice": 0.7255948686116284, + "FN": 5019, + "FP": 1612, + "IoU": 0.5693596570983245, + "TN": 894042, + "TP": 8767, + "n_pred": 10379, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9604061881719148, + "FN": 1267, + "FP": 394, + "IoU": 0.9238283041364762, + "TN": 887634, + "TP": 20145, + "n_pred": 20539, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7433656443667567, + "FN": 2300, + "FP": 930, + "IoU": 0.5915528578654528, + "TN": 901532, + "TP": 4678, + "n_pred": 5608, + "n_ref": 6978 + }, + "2": { + "Dice": 0.6891222044416689, + "FN": 5496, + "FP": 2469, + "IoU": 0.5256952301554219, + "TN": 892647, + "TP": 8828, + "n_pred": 11297, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9416722482697031, + "FN": 1763, + "FP": 327, + "IoU": 0.8897737461104372, + "TN": 890479, + "TP": 16871, + "n_pred": 17198, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6749376992952651, + "FN": 11584, + "FP": 547, + "IoU": 0.5093629929221436, + "TN": 1401035, + "TP": 12594, + "n_pred": 13141, + "n_ref": 24178 + }, + "2": { + "Dice": 0.740423614240649, + "FN": 5226, + "FP": 1686, + "IoU": 0.58783542039356, + "TN": 1408990, + "TP": 9858, + "n_pred": 11544, + "n_ref": 15084 + }, + "3": { + "Dice": 0.946518298512928, + "FN": 2012, + "FP": 617, + "IoU": 0.8984667670799058, + "TN": 1399867, + "TP": 23264, + "n_pred": 23881, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7582273809923178, + "FN": 6249, + "FP": 958, + "IoU": 0.6106008212664794, + "TN": 1407252, + "TP": 11301, + "n_pred": 12259, + "n_ref": 17550 + }, + "2": { + "Dice": 0.7381607315441231, + "FN": 5139, + "FP": 1905, + "IoU": 0.5849879219937548, + "TN": 1408787, + "TP": 9929, + "n_pred": 11834, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9373037159296701, + "FN": 2256, + "FP": 479, + "IoU": 0.8820052633849605, + "TN": 1402581, + "TP": 20444, + "n_pred": 20923, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8242481203007519, + "FN": 2242, + "FP": 750, + "IoU": 0.701039168665068, + "TN": 752040, + "TP": 7016, + "n_pred": 7766, + "n_ref": 9258 + }, + "2": { + "Dice": 0.7237494892896749, + "FN": 3210, + "FP": 1523, + "IoU": 0.5670904600750023, + "TN": 751115, + "TP": 6200, + "n_pred": 7723, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9394087765469123, + "FN": 667, + "FP": 1313, + "IoU": 0.8857406659357147, + "TN": 744719, + "TP": 15349, + "n_pred": 16662, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7370190881218475, + "FN": 1192, + "FP": 1467, + "IoU": 0.5835552075176195, + "TN": 755663, + "TP": 3726, + "n_pred": 5193, + "n_ref": 4918 + }, + "2": { + "Dice": 0.7065440672992273, + "FN": 4015, + "FP": 1985, + "IoU": 0.5462451788550253, + "TN": 748825, + "TP": 7223, + "n_pred": 9208, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9256147450842388, + "FN": 1391, + "FP": 300, + "IoU": 0.8615296429741238, + "TN": 749836, + "TP": 10521, + "n_pred": 10821, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7470307758994364, + "FN": 5227, + "FP": 609, + "IoU": 0.5962083996402131, + "TN": 1063819, + "TP": 8617, + "n_pred": 9226, + "n_ref": 13844 + }, + "2": { + "Dice": 0.6830175747784795, + "FN": 2894, + "FP": 3581, + "IoU": 0.5186231506951156, + "TN": 1064821, + "TP": 6976, + "n_pred": 10557, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9394990366088632, + "FN": 1338, + "FP": 860, + "IoU": 0.8859011627906976, + "TN": 1059008, + "TP": 17066, + "n_pred": 17926, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7525627430187345, + "FN": 4780, + "FP": 820, + "IoU": 0.6032870501558515, + "TN": 1064156, + "TP": 8516, + "n_pred": 9336, + "n_ref": 13296 + }, + "2": { + "Dice": 0.7077133728890918, + "FN": 3047, + "FP": 3357, + "IoU": 0.5476442749170022, + "TN": 1064115, + "TP": 7753, + "n_pred": 11110, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9322656430958605, + "FN": 1139, + "FP": 908, + "IoU": 0.8731250774761373, + "TN": 1062138, + "TP": 14087, + "n_pred": 14995, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6272704339051464, + "FN": 4159, + "FP": 1751, + "IoU": 0.45695120830653313, + "TN": 1095037, + "TP": 4973, + "n_pred": 6724, + "n_ref": 9132 + }, + "2": { + "Dice": 0.7423888659982603, + "FN": 3374, + "FP": 2253, + "IoU": 0.5903167091372407, + "TN": 1092185, + "TP": 8108, + "n_pred": 10361, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9032511455378573, + "FN": 1147, + "FP": 1070, + "IoU": 0.8235715422568837, + "TN": 1093354, + "TP": 10349, + "n_pred": 11419, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6082826183761318, + "FN": 1003, + "FP": 1636, + "IoU": 0.43707337883959047, + "TN": 1101232, + "TP": 2049, + "n_pred": 3685, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8352656601885061, + "FN": 2338, + "FP": 1612, + "IoU": 0.7171297622457748, + "TN": 1091956, + "TP": 10014, + "n_pred": 11626, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7662009314703926, + "FN": 401, + "FP": 1356, + "IoU": 0.6210094909404659, + "TN": 1101284, + "TP": 2879, + "n_pred": 4235, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8554168344744261, + "FN": 1730, + "FP": 783, + "IoU": 0.7473610133708656, + "TN": 1136933, + "TP": 7434, + "n_pred": 8217, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8653244565653325, + "FN": 3234, + "FP": 1803, + "IoU": 0.7626184080305387, + "TN": 1125661, + "TP": 16182, + "n_pred": 17985, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9268526173795745, + "FN": 1280, + "FP": 401, + "IoU": 0.8636769118481875, + "TN": 1134549, + "TP": 10650, + "n_pred": 11051, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49044585987261147, + "FN": 1388, + "FP": 852, + "IoU": 0.32489451476793246, + "TN": 1143562, + "TP": 1078, + "n_pred": 1930, + "n_ref": 2466 + }, + "2": { + "Dice": 0.6487045025961613, + "FN": 11880, + "FP": 1719, + "IoU": 0.48006117377174534, + "TN": 1120725, + "TP": 12556, + "n_pred": 14275, + "n_ref": 24436 + }, + "3": { + "Dice": 0.35645256722109, + "FN": 5, + "FP": 9784, + "IoU": 0.21688, + "TN": 1134380, + "TP": 2711, + "n_pred": 12495, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8425149700598802, + "FN": 1997, + "FP": 1685, + "IoU": 0.727884117951371, + "TN": 787269, + "TP": 9849, + "n_pred": 11534, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8104476747553137, + "FN": 1637, + "FP": 1636, + "IoU": 0.6813047711781889, + "TN": 790530, + "TP": 6997, + "n_pred": 8633, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9418186180422264, + "FN": 802, + "FP": 168, + "IoU": 0.8900351434077769, + "TN": 791979, + "TP": 7851, + "n_pred": 8019, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.612325297814464, + "FN": 675, + "FP": 3458, + "IoU": 0.4412599702582128, + "TN": 793403, + "TP": 3264, + "n_pred": 6722, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8389995760915642, + "FN": 2756, + "FP": 1042, + "IoU": 0.7226522564626844, + "TN": 787106, + "TP": 9896, + "n_pred": 10938, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8879000513434879, + "FN": 252, + "FP": 403, + "IoU": 0.7983995075407818, + "TN": 797551, + "TP": 2594, + "n_pred": 2997, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7094400367942969, + "FN": 4937, + "FP": 2644, + "IoU": 0.5497148966500356, + "TN": 1331004, + "TP": 9255, + "n_pred": 11899, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8049363057324841, + "FN": 2518, + "FP": 1402, + "IoU": 0.6735509660226515, + "TN": 1335832, + "TP": 8088, + "n_pred": 9490, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9666936978683967, + "FN": 639, + "FP": 511, + "IoU": 0.935534503055104, + "TN": 1330001, + "TP": 16689, + "n_pred": 17200, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7418738049713193, + "FN": 630, + "FP": 3015, + "IoU": 0.5896656534954408, + "TN": 1338957, + "TP": 5238, + "n_pred": 8253, + "n_ref": 5868 + }, + "2": { + "Dice": 0.7948227549704221, + "FN": 3179, + "FP": 1434, + "IoU": 0.6595069382934751, + "TN": 1334292, + "TP": 8935, + "n_pred": 10369, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9305863432868258, + "FN": 913, + "FP": 684, + "IoU": 0.8701837099658593, + "TN": 1335538, + "TP": 10705, + "n_pred": 11389, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6215578284815106, + "FN": 6142, + "FP": 1554, + "IoU": 0.4509132420091324, + "TN": 837952, + "TP": 6320, + "n_pred": 7874, + "n_ref": 12462 + }, + "2": { + "Dice": 0.7536990545376849, + "FN": 2393, + "FP": 2218, + "IoU": 0.6047488427910166, + "TN": 840302, + "TP": 7055, + "n_pred": 9273, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9519156877813152, + "FN": 1146, + "FP": 606, + "IoU": 0.9082434272546349, + "TN": 832874, + "TP": 17342, + "n_pred": 17948, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6004312489633439, + "FN": 3318, + "FP": 1500, + "IoU": 0.4290116141265703, + "TN": 843530, + "TP": 3620, + "n_pred": 5120, + "n_ref": 6938 + }, + "2": { + "Dice": 0.7757088846880907, + "FN": 3085, + "FP": 1661, + "IoU": 0.6335983941943951, + "TN": 839015, + "TP": 8207, + "n_pred": 9868, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9277160132631168, + "FN": 1105, + "FP": 748, + "IoU": 0.8651775320139697, + "TN": 838224, + "TP": 11891, + "n_pred": 12639, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7209097320169252, + "FN": 1767, + "FP": 1399, + "IoU": 0.5636113025499655, + "TN": 844713, + "TP": 4089, + "n_pred": 5488, + "n_ref": 5856 + }, + "2": { + "Dice": 0.78359041070433, + "FN": 2287, + "FP": 2371, + "IoU": 0.6441830265067604, + "TN": 838877, + "TP": 8433, + "n_pred": 10804, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9100458524385161, + "FN": 2040, + "FP": 118, + "IoU": 0.8349395747284687, + "TN": 838894, + "TP": 10916, + "n_pred": 11034, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5322607675548852, + "FN": 516, + "FP": 2275, + "IoU": 0.36263987211692167, + "TN": 847589, + "TP": 1588, + "n_pred": 3863, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8147654916975321, + "FN": 2797, + "FP": 1654, + "IoU": 0.6874297752808989, + "TN": 837728, + "TP": 9789, + "n_pred": 11443, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9281826163301141, + "FN": 817, + "FP": 410, + "IoU": 0.8659895150720839, + "TN": 842812, + "TP": 7929, + "n_pred": 8339, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6468840057636888, + "FN": 5905, + "FP": 1937, + "IoU": 0.4780698835274542, + "TN": 782015, + "TP": 7183, + "n_pred": 9120, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7151986985823844, + "FN": 2699, + "FP": 2203, + "IoU": 0.5566609387718188, + "TN": 785983, + "TP": 6155, + "n_pred": 8358, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9157857227699252, + "FN": 1893, + "FP": 234, + "IoU": 0.8446538124452235, + "TN": 783348, + "TP": 11565, + "n_pred": 11799, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6125954198473282, + "FN": 2853, + "FP": 3237, + "IoU": 0.44154057771664373, + "TN": 786135, + "TP": 4815, + "n_pred": 8052, + "n_ref": 7668 + }, + "2": { + "Dice": 0.7473427812223207, + "FN": 2872, + "FP": 1692, + "IoU": 0.596605974898356, + "TN": 785726, + "TP": 6750, + "n_pred": 8442, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9159551605970843, + "FN": 1147, + "FP": 300, + "IoU": 0.8449421345906558, + "TN": 787708, + "TP": 7885, + "n_pred": 8185, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7345659383091809, + "FN": 4383, + "FP": 1460, + "IoU": 0.5804853532452613, + "TN": 882742, + "TP": 8085, + "n_pred": 9545, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7583916619833444, + "FN": 2916, + "FP": 1813, + "IoU": 0.6108139247798535, + "TN": 884519, + "TP": 7422, + "n_pred": 9235, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9084080631562811, + "FN": 400, + "FP": 1990, + "IoU": 0.8321864906614239, + "TN": 882428, + "TP": 11852, + "n_pred": 13842, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6484492622704005, + "FN": 2049, + "FP": 2621, + "IoU": 0.4797816642530912, + "TN": 887693, + "TP": 4307, + "n_pred": 6928, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8258419243986255, + "FN": 2506, + "FP": 1295, + "IoU": 0.7033481620229455, + "TN": 883857, + "TP": 9012, + "n_pred": 10307, + "n_ref": 11518 + }, + "3": { + "Dice": 0.902792812297034, + "FN": 486, + "FP": 1310, + "IoU": 0.8228097868981847, + "TN": 886534, + "TP": 8340, + "n_pred": 9650, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7446247464503043, + "FN": 3878, + "FP": 1158, + "IoU": 0.5931491355630958, + "TN": 749670, + "TP": 7342, + "n_pred": 8500, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8307191942506426, + "FN": 2494, + "FP": 733, + "IoU": 0.7104531179901301, + "TN": 750903, + "TP": 7918, + "n_pred": 8651, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9651202167287504, + "FN": 352, + "FP": 472, + "IoU": 0.9325916230366492, + "TN": 749824, + "TP": 11400, + "n_pred": 11872, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6818638954073081, + "FN": 741, + "FP": 2106, + "IoU": 0.517293997965412, + "TN": 756150, + "TP": 3051, + "n_pred": 5157, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8169332079021637, + "FN": 2948, + "FP": 944, + "IoU": 0.6905216284987278, + "TN": 749472, + "TP": 8684, + "n_pred": 9628, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9147453853336206, + "FN": 466, + "FP": 721, + "IoU": 0.842885506287227, + "TN": 754493, + "TP": 6368, + "n_pred": 7089, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7733544596289694, + "FN": 2085, + "FP": 1348, + "IoU": 0.6304628632938644, + "TN": 986038, + "TP": 5857, + "n_pred": 7205, + "n_ref": 7942 + }, + "2": { + "Dice": 0.7474920200638395, + "FN": 2191, + "FP": 2239, + "IoU": 0.5967962137071084, + "TN": 984341, + "TP": 6557, + "n_pred": 8796, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9488082183874877, + "FN": 106, + "FP": 1668, + "IoU": 0.9026023937630394, + "TN": 977114, + "TP": 16440, + "n_pred": 18108, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7659686553404451, + "FN": 334, + "FP": 1443, + "IoU": 0.6207043756670224, + "TN": 990643, + "TP": 2908, + "n_pred": 4351, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7693970420932879, + "FN": 1571, + "FP": 2483, + "IoU": 0.625219561800869, + "TN": 984511, + "TP": 6763, + "n_pred": 9246, + "n_ref": 8334 + }, + "3": { + "Dice": 0.8960268317853457, + "FN": 195, + "FP": 2223, + "IoU": 0.8116382332320635, + "TN": 982491, + "TP": 10419, + "n_pred": 12642, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6901761121776145, + "FN": 6055, + "FP": 1369, + "IoU": 0.5269228318358504, + "TN": 742323, + "TP": 8269, + "n_pred": 9638, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8328754031776371, + "FN": 1840, + "FP": 958, + "IoU": 0.7136131013306038, + "TN": 748246, + "TP": 6972, + "n_pred": 7930, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9519440991126162, + "FN": 199, + "FP": 922, + "IoU": 0.9082951570680629, + "TN": 745792, + "TP": 11103, + "n_pred": 12025, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7950523964954476, + "FN": 608, + "FP": 1778, + "IoU": 0.6598232107214144, + "TN": 751002, + "TP": 4628, + "n_pred": 6406, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8643941013036974, + "FN": 1243, + "FP": 1295, + "IoU": 0.761174367177943, + "TN": 747389, + "TP": 8089, + "n_pred": 9384, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8114771079345349, + "FN": 275, + "FP": 1545, + "IoU": 0.6827610249259195, + "TN": 752279, + "TP": 3917, + "n_pred": 5462, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8666541752545125, + "FN": 1008, + "FP": 1127, + "IoU": 0.764686432271575, + "TN": 629903, + "TP": 6938, + "n_pred": 8065, + "n_ref": 7946 + }, + "2": { + "Dice": 0.7847054770926628, + "FN": 810, + "FP": 1690, + "IoU": 0.6456916099773242, + "TN": 631920, + "TP": 4556, + "n_pred": 6246, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9585922770756232, + "FN": 470, + "FP": 123, + "IoU": 0.9204774037816816, + "TN": 631519, + "TP": 6864, + "n_pred": 6987, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6051701281484755, + "FN": 281, + "FP": 3293, + "IoU": 0.43386662442578805, + "TN": 632663, + "TP": 2739, + "n_pred": 6032, + "n_ref": 3020 + }, + "2": { + "Dice": 0.8622026887280249, + "FN": 682, + "FP": 1450, + "IoU": 0.7577823221995001, + "TN": 630174, + "TP": 6670, + "n_pred": 8120, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9227927595123753, + "FN": 258, + "FP": 160, + "IoU": 0.8566529492455418, + "TN": 636060, + "TP": 2498, + "n_pred": 2658, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7751902931645188, + "FN": 5154, + "FP": 812, + "IoU": 0.6329067191730249, + "TN": 966788, + "TP": 10286, + "n_pred": 11098, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8294819035559776, + "FN": 2035, + "FP": 1197, + "IoU": 0.7086450914991436, + "TN": 971947, + "TP": 7861, + "n_pred": 9058, + "n_ref": 9896 + }, + "3": { + "Dice": 0.971581212436002, + "FN": 124, + "FP": 642, + "IoU": 0.9447330447330448, + "TN": 969180, + "TP": 13094, + "n_pred": 13736, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7129057798891528, + "FN": 1686, + "FP": 1940, + "IoU": 0.5538877952755905, + "TN": 974912, + "TP": 4502, + "n_pred": 6442, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8188984491730641, + "FN": 2009, + "FP": 1506, + "IoU": 0.6933344965974525, + "TN": 971578, + "TP": 7947, + "n_pred": 9453, + "n_ref": 9956 + }, + "3": { + "Dice": 0.8361589970081208, + "FN": 121, + "FP": 2179, + "IoU": 0.7184477904272248, + "TN": 974871, + "TP": 5869, + "n_pred": 8048, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8335756059632873, + "FN": 3851, + "FP": 1072, + "IoU": 0.7146417806631116, + "TN": 1031324, + "TP": 12329, + "n_pred": 13401, + "n_ref": 16180 + }, + "2": { + "Dice": 0.7922015596880624, + "FN": 2105, + "FP": 1359, + "IoU": 0.655905433594914, + "TN": 1038509, + "TP": 6603, + "n_pred": 7962, + "n_ref": 8708 + }, + "3": { + "Dice": 0.946635361534482, + "FN": 366, + "FP": 975, + "IoU": 0.8986777483944087, + "TN": 1035341, + "TP": 11894, + "n_pred": 12869, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7310954832161242, + "FN": 388, + "FP": 3321, + "IoU": 0.5761627242600845, + "TN": 1039825, + "TP": 5042, + "n_pred": 8363, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8116060901214949, + "FN": 2406, + "FP": 1269, + "IoU": 0.6829436631869554, + "TN": 1036985, + "TP": 7916, + "n_pred": 9185, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9119687347337567, + "FN": 413, + "FP": 488, + "IoU": 0.8381824712643678, + "TN": 1043008, + "TP": 4667, + "n_pred": 5155, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5665230692389336, + "FN": 6625, + "FP": 318, + "IoU": 0.39520905923344946, + "TN": 477736, + "TP": 4537, + "n_pred": 4855, + "n_ref": 11162 + }, + "2": { + "Dice": 0.5204451669376016, + "FN": 636, + "FP": 3199, + "IoU": 0.3517579445571332, + "TN": 483300, + "TP": 2081, + "n_pred": 5280, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9375777685607631, + "FN": 130, + "FP": 472, + "IoU": 0.8824907280890103, + "TN": 484093, + "TP": 4521, + "n_pred": 4993, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7988847863763092, + "FN": 1350, + "FP": 1319, + "IoU": 0.6651191969887077, + "TN": 481246, + "TP": 5301, + "n_pred": 6620, + "n_ref": 6651 + }, + "2": { + "Dice": 0.692986881937437, + "FN": 613, + "FP": 1821, + "IoU": 0.5302065238370971, + "TN": 484035, + "TP": 2747, + "n_pred": 4568, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8248858995916406, + "FN": 73, + "FP": 656, + "IoU": 0.7019623875715454, + "TN": 486770, + "TP": 1717, + "n_pred": 2373, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.839223494275759, + "FN": 4074, + "FP": 448, + "IoU": 0.7229845626072041, + "TN": 464156, + "TP": 11802, + "n_pred": 12250, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7234943236482586, + "FN": 759, + "FP": 2115, + "IoU": 0.5667772083207718, + "TN": 473846, + "TP": 3760, + "n_pred": 5875, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9471638353008927, + "FN": 381, + "FP": 353, + "IoU": 0.8996307944755915, + "TN": 473167, + "TP": 6579, + "n_pred": 6932, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8430547765937558, + "FN": 2592, + "FP": 766, + "IoU": 0.7286903126767391, + "TN": 468103, + "TP": 9019, + "n_pred": 9785, + "n_ref": 11611 + }, + "2": { + "Dice": 0.7146734520780322, + "FN": 1449, + "FP": 1915, + "IoU": 0.5560248119308433, + "TN": 472903, + "TP": 4213, + "n_pred": 6128, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8676662320730117, + "FN": 144, + "FP": 668, + "IoU": 0.7662636729994243, + "TN": 477006, + "TP": 2662, + "n_pred": 3330, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.682347100257548, + "FN": 9677, + "FP": 560, + "IoU": 0.5178504144687265, + "TN": 623408, + "TP": 10995, + "n_pred": 11555, + "n_ref": 20672 + }, + "2": { + "Dice": 0.6741762544425035, + "FN": 3470, + "FP": 1939, + "IoU": 0.5084961381190368, + "TN": 633635, + "TP": 5596, + "n_pred": 7535, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9071615990121933, + "FN": 2243, + "FP": 163, + "IoU": 0.830096744580185, + "TN": 630479, + "TP": 11755, + "n_pred": 11918, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7151765500258173, + "FN": 6329, + "FP": 842, + "IoU": 0.5566341041177199, + "TN": 628466, + "TP": 9003, + "n_pred": 9845, + "n_ref": 15332 + }, + "2": { + "Dice": 0.7683201803833145, + "FN": 3988, + "FP": 944, + "IoU": 0.6237986270022883, + "TN": 631530, + "TP": 8178, + "n_pred": 9122, + "n_ref": 12166 + }, + "3": { + "Dice": 0.8886508202209574, + "FN": 926, + "FP": 737, + "IoU": 0.7996144113748644, + "TN": 636341, + "TP": 6636, + "n_pred": 7373, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7151748024677995, + "FN": 8837, + "FP": 1689, + "IoU": 0.5566319868581778, + "TN": 540739, + "TP": 13215, + "n_pred": 14904, + "n_ref": 22052 + }, + "2": { + "Dice": 0.5746526158724238, + "FN": 1388, + "FP": 3173, + "IoU": 0.40316671028526563, + "TN": 556838, + "TP": 3081, + "n_pred": 6254, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9322933316284125, + "FN": 606, + "FP": 453, + "IoU": 0.8731736526946108, + "TN": 556130, + "TP": 7291, + "n_pred": 7744, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7133597011645793, + "FN": 1939, + "FP": 3279, + "IoU": 0.5544360003415593, + "TN": 552769, + "TP": 6493, + "n_pred": 9772, + "n_ref": 8432 + }, + "2": { + "Dice": 0.7114217399301085, + "FN": 995, + "FP": 2143, + "IoU": 0.5520982015415358, + "TN": 557474, + "TP": 3868, + "n_pred": 6011, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8786301369863013, + "FN": 245, + "FP": 641, + "IoU": 0.7835328609821647, + "TN": 560387, + "TP": 3207, + "n_pred": 3848, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3916030534351145, + "FN": 5523, + "FP": 853, + "IoU": 0.24347413383958236, + "TN": 410452, + "TP": 2052, + "n_pred": 2905, + "n_ref": 7575 + }, + "2": { + "Dice": 0.11506693249786386, + "FN": 2452, + "FP": 3762, + "IoU": 0.06104563312178906, + "TN": 412262, + "TP": 404, + "n_pred": 4166, + "n_ref": 2856 + }, + "3": { + "Dice": 0.4857480182155507, + "FN": 2759, + "FP": 290, + "IoU": 0.32078413900646024, + "TN": 414391, + "TP": 1440, + "n_pred": 1730, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5783742162578375, + "FN": 2108, + "FP": 1725, + "IoU": 0.4068399876199319, + "TN": 412418, + "TP": 2629, + "n_pred": 4354, + "n_ref": 4737 + }, + "2": { + "Dice": 0.18286479250334672, + "FN": 2310, + "FP": 3794, + "IoU": 0.10063356416678945, + "TN": 412093, + "TP": 683, + "n_pred": 4477, + "n_ref": 2993 + }, + "3": { + "Dice": 0.82923781757601, + "FN": 392, + "FP": 428, + "IoU": 0.7082888651725364, + "TN": 416069, + "TP": 1991, + "n_pred": 2419, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8147164505546008, + "FN": 3136, + "FP": 1608, + "IoU": 0.6873599578225913, + "TN": 481336, + "TP": 10430, + "n_pred": 12038, + "n_ref": 13566 + }, + "2": { + "Dice": 0.7137818251779645, + "FN": 2107, + "FP": 2356, + "IoU": 0.5549461507778221, + "TN": 486482, + "TP": 5565, + "n_pred": 7921, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9348200063714559, + "FN": 436, + "FP": 587, + "IoU": 0.877616939825338, + "TN": 488151, + "TP": 7336, + "n_pred": 7923, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.762917304430563, + "FN": 4041, + "FP": 1690, + "IoU": 0.6167067950775816, + "TN": 481558, + "TP": 9221, + "n_pred": 10911, + "n_ref": 13262 + }, + "2": { + "Dice": 0.7870920335558141, + "FN": 2049, + "FP": 1428, + "IoU": 0.6489297253634895, + "TN": 486606, + "TP": 6427, + "n_pred": 7855, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8756420654230873, + "FN": 161, + "FP": 759, + "IoU": 0.77879297908151, + "TN": 492351, + "TP": 3239, + "n_pred": 3998, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_004/summary_cross_val.json b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_004/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..7ced62a22df12d3f68b8b7397e87b28c0210e1fc --- /dev/null +++ b/nnActive_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/loop_004/summary_cross_val.json @@ -0,0 +1,3408 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.606107503902715, + "FN": 64.90196078431372, + "FP": 42.37254901960784, + "IoU": 0.5163528871563513, + "TN": 1268.235294117647, + "TP": 130.37254901960785, + "n_pred": 172.7450980392157, + "n_ref": 195.27450980392155 + }, + "mean": { + "1": { + "Dice": 0.41013855948331757, + "FN": 140.94117647058823, + "FP": 110.23529411764706, + "IoU": 0.33308923582784816, + "TN": 1076.235294117647, + "TP": 178.47058823529412, + "n_pred": 288.70588235294116, + "n_ref": 319.4117647058824 + }, + "2": { + "Dice": 0.6715015835138599, + "FN": 21.470588235294116, + "FP": 12.117647058823529, + "IoU": 0.5557684360676189, + "TN": 1376.1764705882354, + "TP": 96.11764705882354, + "n_pred": 108.23529411764706, + "n_ref": 117.58823529411765 + }, + "3": { + "Dice": 0.7366823687109674, + "FN": 32.294117647058826, + "FP": 4.764705882352941, + "IoU": 0.6602009895735866, + "TN": 1352.2941176470588, + "TP": 116.52941176470588, + "n_pred": 121.29411764705883, + "n_ref": 148.8235294117647 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9860583016476553, + "FN": 0, + "FP": 22, + "IoU": 0.9725, + "TN": 0, + "TP": 778, + "n_pred": 800, + "n_ref": 778 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 114, + "IoU": 0.0, + "TN": 686, + "TP": 0, + "n_pred": 114, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3669724770642202, + "FN": 524, + "FP": 28, + "IoU": 0.2247191011235955, + "TN": 888, + "TP": 160, + "n_pred": 188, + "n_ref": 684 + }, + "2": { + "Dice": 0.8523809523809524, + "FN": 33, + "FP": 29, + "IoU": 0.7427385892116183, + "TN": 1359, + "TP": 179, + "n_pred": 208, + "n_ref": 212 + }, + "3": { + "Dice": 0.981021897810219, + "FN": 20, + "FP": 6, + "IoU": 0.9627507163323782, + "TN": 902, + "TP": 672, + "n_pred": 678, + "n_ref": 692 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.940014114326041, + "FN": 34, + "FP": 51, + "IoU": 0.8868175765645806, + "TN": 1649, + "TP": 666, + "n_pred": 717, + "n_ref": 700 + }, + "3": { + "Dice": 0.5536723163841808, + "FN": 51, + "FP": 28, + "IoU": 0.3828125, + "TN": 2272, + "TP": 49, + "n_pred": 77, + "n_ref": 100 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 112, + "IoU": 0.0, + "TN": 2288, + "TP": 0, + "n_pred": 112, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 2394, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6653266331658292, + "FN": 333, + "FP": 0, + "IoU": 0.49849397590361444, + "TN": 936, + "TP": 331, + "n_pred": 331, + "n_ref": 664 + }, + "2": { + "Dice": 0.6981818181818182, + "FN": 52, + "FP": 31, + "IoU": 0.5363128491620112, + "TN": 1421, + "TP": 96, + "n_pred": 127, + "n_ref": 148 + }, + "3": { + "Dice": 0.9890955740859525, + "FN": 17, + "FP": 0, + "IoU": 0.9784263959390863, + "TN": 812, + "TP": 771, + "n_pred": 771, + "n_ref": 788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 695, + "IoU": 0.0, + "TN": 105, + "TP": 0, + "n_pred": 695, + "n_ref": 0 + }, + "2": { + "Dice": 0.7, + "FN": 12, + "FP": 0, + "IoU": 0.5384615384615384, + "TN": 774, + "TP": 14, + "n_pred": 14, + "n_ref": 26 + }, + "3": { + "Dice": 0.5, + "FN": 0, + "FP": 4, + "IoU": 0.3333333333333333, + "TN": 794, + "TP": 2, + "n_pred": 6, + "n_ref": 2 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8314937454010302, + "FN": 229, + "FP": 0, + "IoU": 0.7115869017632241, + "TN": 806, + "TP": 565, + "n_pred": 565, + "n_ref": 794 + }, + "2": { + "Dice": 0.6666666666666666, + "FN": 0, + "FP": 6, + "IoU": 0.5, + "TN": 1588, + "TP": 6, + "n_pred": 12, + "n_ref": 6 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6758620689655173, + "FN": 45, + "FP": 96, + "IoU": 0.5104166666666666, + "TN": 512, + "TP": 147, + "n_pred": 243, + "n_ref": 192 + }, + "2": { + "Dice": 0.8603603603603603, + "FN": 19, + "FP": 43, + "IoU": 0.7549407114624506, + "TN": 547, + "TP": 191, + "n_pred": 234, + "n_ref": 210 + }, + "3": { + "Dice": 0.9751693002257337, + "FN": 2, + "FP": 9, + "IoU": 0.9515418502202643, + "TN": 573, + "TP": 216, + "n_pred": 225, + "n_ref": 218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.06859205776173286, + "FN": 9, + "FP": 507, + "IoU": 0.03551401869158879, + "TN": 2665, + "TP": 19, + "n_pred": 526, + "n_ref": 28 + }, + "2": { + "Dice": 0.9274292742927429, + "FN": 25, + "FP": 34, + "IoU": 0.8646788990825688, + "TN": 2764, + "TP": 377, + "n_pred": 411, + "n_ref": 402 + }, + "3": { + "Dice": 0.9430523917995444, + "FN": 1, + "FP": 24, + "IoU": 0.8922413793103449, + "TN": 2968, + "TP": 207, + "n_pred": 231, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4914712153518124, + "FN": 730, + "FP": 224, + "IoU": 0.32579505300353356, + "TN": 1785, + "TP": 461, + "n_pred": 685, + "n_ref": 1191 + }, + "2": { + "Dice": 0.4835164835164835, + "FN": 135, + "FP": 6, + "IoU": 0.3188405797101449, + "TN": 2993, + "TP": 66, + "n_pred": 72, + "n_ref": 201 + }, + "3": { + "Dice": 0.21476510067114093, + "FN": 458, + "FP": 10, + "IoU": 0.12030075187969924, + "TN": 2668, + "TP": 64, + "n_pred": 74, + "n_ref": 522 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 317, + "FP": 60, + "IoU": 0.0, + "TN": 2023, + "TP": 0, + "n_pred": 60, + "n_ref": 317 + }, + "2": { + "Dice": 0.5864661654135338, + "FN": 55, + "FP": 0, + "IoU": 0.4148936170212766, + "TN": 2306, + "TP": 39, + "n_pred": 39, + "n_ref": 94 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8358862144420132, + "FN": 209, + "FP": 16, + "IoU": 0.7180451127819549, + "TN": 2, + "TP": 573, + "n_pred": 589, + "n_ref": 782 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.5658357809478519, + "FN": 40.84313725490196, + "FP": 45.411764705882355, + "IoU": 0.48809931847494176, + "TN": 1081.607843137255, + "TP": 149.7843137254902, + "n_pred": 195.19607843137257, + "n_ref": 190.62745098039215 + }, + "mean": { + "1": { + "Dice": 0.4687224545440129, + "FN": 22.0, + "FP": 49.88235294117647, + "IoU": 0.4169099452415204, + "TN": 1051.0588235294117, + "TP": 194.7058823529412, + "n_pred": 244.58823529411765, + "n_ref": 216.7058823529412 + }, + "2": { + "Dice": 0.5698226546433914, + "FN": 73.23529411764706, + "FP": 25.235294117647058, + "IoU": 0.4536815929326232, + "TN": 1140.9411764705883, + "TP": 78.23529411764706, + "n_pred": 103.47058823529412, + "n_ref": 151.47058823529412 + }, + "3": { + "Dice": 0.6589622336561516, + "FN": 27.294117647058822, + "FP": 61.11764705882353, + "IoU": 0.5937064172506817, + "TN": 1052.8235294117646, + "TP": 176.41176470588235, + "n_pred": 237.52941176470588, + "n_ref": 203.7058823529412 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8, + "FN": 2, + "FP": 26, + "IoU": 0.6666666666666666, + "TN": 1516, + "TP": 56, + "n_pred": 82, + "n_ref": 58 + }, + "3": { + "Dice": 0.9820193637621023, + "FN": 24, + "FP": 2, + "IoU": 0.9646739130434783, + "TN": 864, + "TP": 710, + "n_pred": 712, + "n_ref": 734 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9446768944676894, + "FN": 118, + "FP": 1, + "IoU": 0.8951541850220265, + "TN": 1265, + "TP": 1016, + "n_pred": 1017, + "n_ref": 1134 + }, + "2": { + "Dice": 0.4968152866242038, + "FN": 152, + "FP": 6, + "IoU": 0.3305084745762712, + "TN": 2164, + "TP": 78, + "n_pred": 84, + "n_ref": 230 + }, + "3": { + "Dice": 0.8858447488584474, + "FN": 0, + "FP": 150, + "IoU": 0.7950819672131147, + "TN": 1668, + "TP": 582, + "n_pred": 732, + "n_ref": 582 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9954692556634305, + "FN": 5, + "FP": 2, + "IoU": 0.990979381443299, + "TN": 824, + "TP": 769, + "n_pred": 771, + "n_ref": 774 + }, + "2": { + "Dice": 0.0, + "FN": 202, + "FP": 0, + "IoU": 0.0, + "TN": 1398, + "TP": 0, + "n_pred": 0, + "n_ref": 202 + }, + "3": { + "Dice": 0.5057766367137355, + "FN": 365, + "FP": 20, + "IoU": 0.3384879725085911, + "TN": 1018, + "TP": 197, + "n_pred": 217, + "n_ref": 562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 2399, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9494773519163763, + "FN": 33, + "FP": 25, + "IoU": 0.9038142620232172, + "TN": 2597, + "TP": 545, + "n_pred": 570, + "n_ref": 578 + }, + "2": { + "Dice": 0.5158730158730159, + "FN": 370, + "FP": 118, + "IoU": 0.34759358288770054, + "TN": 2452, + "TP": 260, + "n_pred": 378, + "n_ref": 630 + }, + "3": { + "Dice": 0.0, + "FN": 50, + "FP": 544, + "IoU": 0.0, + "TN": 2606, + "TP": 0, + "n_pred": 544, + "n_ref": 50 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 6, + "IoU": 0.0, + "TN": 1588, + "TP": 0, + "n_pred": 6, + "n_ref": 6 + }, + "2": { + "Dice": 0.27692307692307694, + "FN": 196, + "FP": 180, + "IoU": 0.16071428571428573, + "TN": 1152, + "TP": 72, + "n_pred": 252, + "n_ref": 268 + }, + "3": { + "Dice": 0.7487179487179487, + "FN": 0, + "FP": 196, + "IoU": 0.5983606557377049, + "TN": 1112, + "TP": 292, + "n_pred": 488, + "n_ref": 292 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 157, + "IoU": 0.0, + "TN": 643, + "TP": 0, + "n_pred": 157, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6530612244897959, + "FN": 80, + "FP": 22, + "IoU": 0.48484848484848486, + "TN": 602, + "TP": 96, + "n_pred": 118, + "n_ref": 176 + }, + "3": { + "Dice": 0.8888888888888888, + "FN": 0, + "FP": 70, + "IoU": 0.8, + "TN": 450, + "TP": 280, + "n_pred": 350, + "n_ref": 280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8698884758364313, + "FN": 114, + "FP": 26, + "IoU": 0.7697368421052632, + "TN": 192, + "TP": 468, + "n_pred": 494, + "n_ref": 582 + }, + "2": { + "Dice": 0.9154228855721394, + "FN": 26, + "FP": 8, + "IoU": 0.8440366972477065, + "TN": 582, + "TP": 184, + "n_pred": 192, + "n_ref": 210 + }, + "3": { + "Dice": 0.0, + "FN": 8, + "FP": 0, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 0, + "n_ref": 8 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4, + "FN": 0, + "FP": 6, + "IoU": 0.25, + "TN": 792, + "TP": 2, + "n_pred": 8, + "n_ref": 2 + }, + "2": { + "Dice": 0.8238993710691824, + "FN": 48, + "FP": 64, + "IoU": 0.7005347593582888, + "TN": 426, + "TP": 262, + "n_pred": 326, + "n_ref": 310 + }, + "3": { + "Dice": 0.9379310344827586, + "FN": 12, + "FP": 42, + "IoU": 0.8831168831168831, + "TN": 338, + "TP": 408, + "n_pred": 450, + "n_ref": 420 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5957446808510638, + "FN": 0, + "FP": 19, + "IoU": 0.42424242424242425, + "TN": 767, + "TP": 14, + "n_pred": 33, + "n_ref": 14 + }, + "2": { + "Dice": 0.9175475687103594, + "FN": 34, + "FP": 5, + "IoU": 0.84765625, + "TN": 544, + "TP": 217, + "n_pred": 222, + "n_ref": 251 + }, + "3": { + "Dice": 0.9814814814814815, + "FN": 5, + "FP": 15, + "IoU": 0.9636363636363636, + "TN": 250, + "TP": 530, + "n_pred": 545, + "n_ref": 535 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8694127957931639, + "FN": 98, + "FP": 51, + "IoU": 0.7689922480620155, + "TN": 955, + "TP": 496, + "n_pred": 547, + "n_ref": 594 + }, + "2": { + "Dice": 0.6579804560260586, + "FN": 105, + "FP": 0, + "IoU": 0.49029126213592233, + "TN": 1394, + "TP": 101, + "n_pred": 101, + "n_ref": 206 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 266, + "IoU": 0.0, + "TN": 534, + "TP": 0, + "n_pred": 266, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 288, + "IoU": 0.0, + "TN": 512, + "TP": 0, + "n_pred": 288, + "n_ref": 0 + }, + "2": { + "Dice": 0.21052631578947367, + "FN": 30, + "FP": 0, + "IoU": 0.11764705882352941, + "TN": 766, + "TP": 4, + "n_pred": 4, + "n_ref": 34 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.6069872918964451, + "FN": 43.425925925925924, + "FP": 36.2962962962963, + "IoU": 0.5232744311782338, + "TN": 1074.7592592592591, + "TP": 134.4074074074074, + "n_pred": 170.7037037037037, + "n_ref": 177.83333333333334 + }, + "mean": { + "1": { + "Dice": 0.4155981520162542, + "FN": 71.61111111111111, + "FP": 46.0, + "IoU": 0.35646144397039015, + "TN": 1069.3333333333333, + "TP": 101.94444444444444, + "n_pred": 147.94444444444446, + "n_ref": 173.55555555555554 + }, + "2": { + "Dice": 0.5031847740732512, + "FN": 42.05555555555556, + "FP": 42.44444444444444, + "IoU": 0.3844970912698223, + "TN": 1156.0, + "TP": 48.388888888888886, + "n_pred": 90.83333333333333, + "n_ref": 90.44444444444444 + }, + "3": { + "Dice": 0.9021789495998296, + "FN": 16.61111111111111, + "FP": 20.444444444444443, + "IoU": 0.828864758294489, + "TN": 998.9444444444445, + "TP": 252.88888888888889, + "n_pred": 273.3333333333333, + "n_ref": 269.5 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.18072289156626506, + "FN": 134, + "FP": 138, + "IoU": 0.09933774834437085, + "TN": 2898, + "TP": 30, + "n_pred": 168, + "n_ref": 164 + }, + "3": { + "Dice": 0.946051602814699, + "FN": 138, + "FP": 0, + "IoU": 0.8976261127596439, + "TN": 1852, + "TP": 1210, + "n_pred": 1210, + "n_ref": 1348 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0967741935483871, + "FN": 0, + "FP": 448, + "IoU": 0.05084745762711865, + "TN": 2728, + "TP": 24, + "n_pred": 472, + "n_ref": 24 + }, + "3": { + "Dice": 0.8426229508196721, + "FN": 5, + "FP": 283, + "IoU": 0.7280453257790368, + "TN": 2141, + "TP": 771, + "n_pred": 1054, + "n_ref": 776 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9518619436875567, + "FN": 0, + "FP": 53, + "IoU": 0.9081455805892548, + "TN": 223, + "TP": 524, + "n_pred": 577, + "n_ref": 524 + }, + "2": { + "Dice": 0.8273972602739726, + "FN": 57, + "FP": 6, + "IoU": 0.705607476635514, + "TN": 586, + "TP": 151, + "n_pred": 157, + "n_ref": 208 + }, + "3": { + "Dice": 0.9253731343283582, + "FN": 6, + "FP": 4, + "IoU": 0.8611111111111112, + "TN": 728, + "TP": 62, + "n_pred": 66, + "n_ref": 68 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 70, + "FP": 0, + "IoU": 0.0, + "TN": 1530, + "TP": 0, + "n_pred": 0, + "n_ref": 70 + }, + "2": { + "Dice": 0.6951566951566952, + "FN": 4, + "FP": 103, + "IoU": 0.5327510917030568, + "TN": 1371, + "TP": 122, + "n_pred": 225, + "n_ref": 126 + }, + "3": { + "Dice": 0.9684519442406456, + "FN": 82, + "FP": 4, + "IoU": 0.9388335704125178, + "TN": 194, + "TP": 1320, + "n_pred": 1324, + "n_ref": 1402 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6666666666666666, + "FN": 2, + "FP": 0, + "IoU": 0.5, + "TN": 796, + "TP": 2, + "n_pred": 2, + "n_ref": 4 + }, + "3": { + "Dice": 0.998745294855709, + "FN": 0, + "FP": 2, + "IoU": 0.9974937343358395, + "TN": 2, + "TP": 796, + "n_pred": 798, + "n_ref": 796 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 16, + "IoU": 0.0, + "TN": 1584, + "TP": 0, + "n_pred": 16, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 1599, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.035398230088495575, + "FN": 2, + "FP": 216, + "IoU": 0.018018018018018018, + "TN": 578, + "TP": 4, + "n_pred": 220, + "n_ref": 6 + }, + "2": { + "Dice": 0.6935483870967742, + "FN": 239, + "FP": 27, + "IoU": 0.5308641975308642, + "TN": 233, + "TP": 301, + "n_pred": 328, + "n_ref": 540 + }, + "3": { + "Dice": 0.89937106918239, + "FN": 27, + "FP": 5, + "IoU": 0.8171428571428572, + "TN": 625, + "TP": 143, + "n_pred": 148, + "n_ref": 170 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8351063829787234, + "FN": 124, + "FP": 0, + "IoU": 0.7168949771689498, + "TN": 362, + "TP": 314, + "n_pred": 314, + "n_ref": 438 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 541, + "IoU": 0.0, + "TN": 259, + "TP": 0, + "n_pred": 541, + "n_ref": 0 + }, + "2": { + "Dice": 0.37866666666666665, + "FN": 233, + "FP": 0, + "IoU": 0.23355263157894737, + "TN": 496, + "TP": 71, + "n_pred": 71, + "n_ref": 304 + }, + "3": { + "Dice": 0.7712418300653595, + "FN": 0, + "FP": 70, + "IoU": 0.6276595744680851, + "TN": 612, + "TP": 118, + "n_pred": 188, + "n_ref": 118 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7236842105263158, + "FN": 85, + "FP": 41, + "IoU": 0.5670103092783505, + "TN": 509, + "TP": 165, + "n_pred": 206, + "n_ref": 250 + }, + "3": { + "Dice": 0.8655737704918033, + "FN": 41, + "FP": 0, + "IoU": 0.7630057803468208, + "TN": 627, + "TP": 132, + "n_pred": 132, + "n_ref": 173 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5667870036101083, + "FN": 478, + "FP": 2, + "IoU": 0.3954659949622166, + "TN": 6, + "TP": 314, + "n_pred": 316, + "n_ref": 792 + }, + "2": { + "Dice": 0.7692307692307693, + "FN": 3, + "FP": 0, + "IoU": 0.625, + "TN": 792, + "TP": 5, + "n_pred": 5, + "n_ref": 8 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.38812301166489926, + "FN": 577, + "FP": 0, + "IoU": 0.24078947368421053, + "TN": 40, + "TP": 183, + "n_pred": 183, + "n_ref": 760 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9631067961165048, + "FN": 38, + "FP": 0, + "IoU": 0.9288389513108615, + "TN": 1066, + "TP": 496, + "n_pred": 496, + "n_ref": 534 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.537154124955079, + "FN": 30.87037037037037, + "FP": 28.574074074074076, + "IoU": 0.4691576533127737, + "TN": 1143.1666666666667, + "TP": 86.27777777777777, + "n_pred": 114.85185185185185, + "n_ref": 117.14814814814815 + }, + "mean": { + "1": { + "Dice": 0.1847707754973293, + "FN": 12.833333333333334, + "FP": 33.05555555555556, + "IoU": 0.15483310426777763, + "TN": 1203.611111111111, + "TP": 39.388888888888886, + "n_pred": 72.44444444444444, + "n_ref": 52.22222222222222 + }, + "2": { + "Dice": 0.639199301711644, + "FN": 41.72222222222222, + "FP": 21.38888888888889, + "IoU": 0.5428442520981456, + "TN": 1135.8333333333333, + "TP": 89.94444444444444, + "n_pred": 111.33333333333333, + "n_ref": 131.66666666666666 + }, + "3": { + "Dice": 0.7874922976562636, + "FN": 38.05555555555556, + "FP": 31.27777777777778, + "IoU": 0.7097956035723979, + "TN": 1090.0555555555557, + "TP": 129.5, + "n_pred": 160.77777777777777, + "n_ref": 167.55555555555554 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 2393, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + }, + "2": { + "Dice": 0.601823708206687, + "FN": 127, + "FP": 4, + "IoU": 0.43043478260869567, + "TN": 2170, + "TP": 99, + "n_pred": 103, + "n_ref": 226 + }, + "3": { + "Dice": 0.9348441926345609, + "FN": 23, + "FP": 0, + "IoU": 0.8776595744680851, + "TN": 2212, + "TP": 165, + "n_pred": 165, + "n_ref": 188 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 0, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 0, + "n_ref": 6 + }, + "2": { + "Dice": 0.8760330578512396, + "FN": 10, + "FP": 20, + "IoU": 0.7794117647058824, + "TN": 664, + "TP": 106, + "n_pred": 126, + "n_ref": 116 + }, + "3": { + "Dice": 0.9822485207100592, + "FN": 14, + "FP": 10, + "IoU": 0.9651162790697675, + "TN": 112, + "TP": 664, + "n_pred": 674, + "n_ref": 678 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8571428571428571, + "FN": 4, + "FP": 0, + "IoU": 0.75, + "TN": 784, + "TP": 12, + "n_pred": 12, + "n_ref": 16 + }, + "3": { + "Dice": 0.9974554707379135, + "FN": 0, + "FP": 4, + "IoU": 0.9949238578680203, + "TN": 12, + "TP": 784, + "n_pred": 788, + "n_ref": 784 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 120, + "IoU": 0.0, + "TN": 3080, + "TP": 0, + "n_pred": 120, + "n_ref": 0 + }, + "2": { + "Dice": 0.5263157894736842, + "FN": 231, + "FP": 84, + "IoU": 0.35714285714285715, + "TN": 2710, + "TP": 175, + "n_pred": 259, + "n_ref": 406 + }, + "3": { + "Dice": 0.25052192066805845, + "FN": 582, + "FP": 136, + "IoU": 0.1431980906921241, + "TN": 2362, + "TP": 120, + "n_pred": 256, + "n_ref": 702 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.752, + "FN": 42, + "FP": 20, + "IoU": 0.6025641025641025, + "TN": 1444, + "TP": 94, + "n_pred": 114, + "n_ref": 136 + }, + "2": { + "Dice": 0.07106598984771574, + "FN": 322, + "FP": 44, + "IoU": 0.03684210526315789, + "TN": 1220, + "TP": 14, + "n_pred": 58, + "n_ref": 336 + }, + "3": { + "Dice": 0.4171779141104294, + "FN": 0, + "FP": 380, + "IoU": 0.26356589147286824, + "TN": 1084, + "TP": 136, + "n_pred": 516, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.04081632653061224, + "FN": 0, + "FP": 94, + "IoU": 0.020833333333333332, + "TN": 1504, + "TP": 2, + "n_pred": 96, + "n_ref": 2 + }, + "2": { + "Dice": 0.832967032967033, + "FN": 15, + "FP": 137, + "IoU": 0.7137476459510358, + "TN": 1069, + "TP": 379, + "n_pred": 516, + "n_ref": 394 + }, + "3": { + "Dice": 0.9290780141843972, + "FN": 5, + "FP": 15, + "IoU": 0.8675496688741722, + "TN": 1449, + "TP": 131, + "n_pred": 146, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 337, + "IoU": 0.0, + "TN": 1263, + "TP": 0, + "n_pred": 337, + "n_ref": 0 + }, + "2": { + "Dice": 0.7789473684210526, + "FN": 9, + "FP": 12, + "IoU": 0.6379310344827587, + "TN": 1542, + "TP": 37, + "n_pred": 49, + "n_ref": 46 + }, + "3": { + "Dice": 0.8292682926829268, + "FN": 7, + "FP": 0, + "IoU": 0.7083333333333334, + "TN": 1576, + "TP": 17, + "n_pred": 17, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 793, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + }, + "2": { + "Dice": 0.8807069219440353, + "FN": 17, + "FP": 64, + "IoU": 0.7868421052631579, + "TN": 420, + "TP": 299, + "n_pred": 363, + "n_ref": 316 + }, + "3": { + "Dice": 0.7950819672131147, + "FN": 41, + "FP": 9, + "IoU": 0.6598639455782312, + "TN": 653, + "TP": 97, + "n_pred": 106, + "n_ref": 138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9669902912621359, + "FN": 16, + "FP": 18, + "IoU": 0.9360902255639098, + "TN": 268, + "TP": 498, + "n_pred": 516, + "n_ref": 514 + }, + "3": { + "Dice": 0.9517543859649122, + "FN": 13, + "FP": 9, + "IoU": 0.9079497907949791, + "TN": 561, + "TP": 217, + "n_pred": 226, + "n_ref": 230 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 790, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8701206529453513, + "FN": 183, + "FP": 0, + "IoU": 0.7701005025125628, + "TN": 4, + "TP": 613, + "n_pred": 613, + "n_ref": 796 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.5139627160411075, + "FN": 41.666666666666664, + "FP": 73.21568627450979, + "IoU": 0.4477730078999012, + "TN": 1218.5882352941176, + "TP": 172.41176470588235, + "n_pred": 245.62745098039215, + "n_ref": 214.07843137254903 + }, + "mean": { + "1": { + "Dice": 0.3002150842411245, + "FN": 73.47058823529412, + "FP": 136.76470588235293, + "IoU": 0.24318388197165586, + "TN": 1172.5882352941176, + "TP": 123.05882352941177, + "n_pred": 259.8235294117647, + "n_ref": 196.52941176470588 + }, + "2": { + "Dice": 0.5703095268410461, + "FN": 25.529411764705884, + "FP": 32.470588235294116, + "IoU": 0.476189826387959, + "TN": 1368.7058823529412, + "TP": 79.17647058823529, + "n_pred": 111.6470588235294, + "n_ref": 104.70588235294117 + }, + "3": { + "Dice": 0.6713635370411523, + "FN": 26.0, + "FP": 50.411764705882355, + "IoU": 0.6239453153400888, + "TN": 1114.4705882352941, + "TP": 315.0, + "n_pred": 365.4117647058824, + "n_ref": 341.0 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6666666666666666, + "FN": 1, + "FP": 0, + "IoU": 0.5, + "TN": 2398, + "TP": 1, + "n_pred": 1, + "n_ref": 2 + }, + "2": { + "Dice": 0.9833333333333333, + "FN": 1, + "FP": 5, + "IoU": 0.9672131147540983, + "TN": 2217, + "TP": 177, + "n_pred": 182, + "n_ref": 178 + }, + "3": { + "Dice": 0.9982375749030666, + "FN": 4, + "FP": 1, + "IoU": 0.9964813511611541, + "TN": 979, + "TP": 1416, + "n_pred": 1417, + "n_ref": 1420 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 47, + "IoU": 0.0, + "TN": 753, + "TP": 0, + "n_pred": 47, + "n_ref": 0 + }, + "2": { + "Dice": 0.779874213836478, + "FN": 26, + "FP": 9, + "IoU": 0.6391752577319587, + "TN": 703, + "TP": 62, + "n_pred": 71, + "n_ref": 88 + }, + "3": { + "Dice": 0.9867060561299852, + "FN": 4, + "FP": 14, + "IoU": 0.9737609329446064, + "TN": 114, + "TP": 668, + "n_pred": 682, + "n_ref": 672 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 22, + "IoU": 0.0, + "TN": 1578, + "TP": 0, + "n_pred": 22, + "n_ref": 0 + }, + "2": { + "Dice": 0.060836501901140684, + "FN": 152, + "FP": 95, + "IoU": 0.03137254901960784, + "TN": 1345, + "TP": 8, + "n_pred": 103, + "n_ref": 160 + }, + "3": { + "Dice": 0.90625, + "FN": 228, + "FP": 0, + "IoU": 0.8285714285714286, + "TN": 270, + "TP": 1102, + "n_pred": 1102, + "n_ref": 1330 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 429, + "IoU": 0.0, + "TN": 371, + "TP": 0, + "n_pred": 429, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 795, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8977272727272727, + "FN": 11, + "FP": 7, + "IoU": 0.8144329896907216, + "TN": 703, + "TP": 79, + "n_pred": 86, + "n_ref": 90 + }, + "3": { + "Dice": 0.9929378531073446, + "FN": 7, + "FP": 3, + "IoU": 0.9859747545582047, + "TN": 87, + "TP": 703, + "n_pred": 706, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 3172, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 152, + "IoU": 0.0, + "TN": 3048, + "TP": 0, + "n_pred": 152, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 145, + "IoU": 0.0, + "TN": 3055, + "TP": 0, + "n_pred": 145, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.12698412698412698, + "FN": 48, + "FP": 557, + "IoU": 0.06779661016949153, + "TN": 1751, + "TP": 44, + "n_pred": 601, + "n_ref": 92 + }, + "2": { + "Dice": 0.8223938223938224, + "FN": 0, + "FP": 184, + "IoU": 0.6983606557377049, + "TN": 1790, + "TP": 426, + "n_pred": 610, + "n_ref": 426 + }, + "3": { + "Dice": 0.6737588652482269, + "FN": 184, + "FP": 0, + "IoU": 0.5080213903743316, + "TN": 2026, + "TP": 190, + "n_pred": 190, + "n_ref": 374 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2, + "FN": 10, + "FP": 6, + "IoU": 0.1111111111111111, + "TN": 782, + "TP": 2, + "n_pred": 8, + "n_ref": 12 + }, + "2": { + "Dice": 0.7251461988304093, + "FN": 184, + "FP": 4, + "IoU": 0.5688073394495413, + "TN": 364, + "TP": 248, + "n_pred": 252, + "n_ref": 432 + }, + "3": { + "Dice": 0.6666666666666666, + "FN": 4, + "FP": 4, + "IoU": 0.5, + "TN": 784, + "TP": 8, + "n_pred": 12, + "n_ref": 12 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 347, + "IoU": 0.0, + "TN": 453, + "TP": 0, + "n_pred": 347, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 0, + "TP": 800, + "n_pred": 800, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9343683839096684, + "FN": 92, + "FP": 1, + "IoU": 0.8768211920529801, + "TN": 845, + "TP": 662, + "n_pred": 663, + "n_ref": 754 + }, + "2": { + "Dice": 0.8576449912126538, + "FN": 56, + "FP": 25, + "IoU": 0.7507692307692307, + "TN": 1275, + "TP": 244, + "n_pred": 269, + "n_ref": 300 + }, + "3": { + "Dice": 0.9550930996714129, + "FN": 4, + "FP": 37, + "IoU": 0.9140461215932913, + "TN": 1123, + "TP": 436, + "n_pred": 473, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 756, + "IoU": 0.0, + "TN": 44, + "TP": 0, + "n_pred": 756, + "n_ref": 0 + }, + "2": { + "Dice": 0.3333333333333333, + "FN": 0, + "FP": 8, + "IoU": 0.2, + "TN": 790, + "TP": 2, + "n_pred": 10, + "n_ref": 2 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6179463459759482, + "FN": 826, + "FP": 0, + "IoU": 0.44712182061579653, + "TN": 106, + "TP": 668, + "n_pred": 668, + "n_ref": 1494 + }, + "2": { + "Dice": 0.4, + "FN": 0, + "FP": 6, + "IoU": 0.25, + "TN": 1592, + "TP": 2, + "n_pred": 8, + "n_ref": 2 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 641, + "IoU": 0.0, + "TN": 959, + "TP": 0, + "n_pred": 641, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4083769633507853, + "FN": 220, + "FP": 119, + "IoU": 0.2565789473684211, + "TN": 1144, + "TP": 117, + "n_pred": 236, + "n_ref": 337 + }, + "2": { + "Dice": 0.7814569536423841, + "FN": 2, + "FP": 31, + "IoU": 0.6413043478260869, + "TN": 1508, + "TP": 59, + "n_pred": 90, + "n_ref": 61 + }, + "3": { + "Dice": 0.8767123287671232, + "FN": 7, + "FP": 2, + "IoU": 0.7804878048780488, + "TN": 1559, + "TP": 32, + "n_pred": 34, + "n_ref": 39 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9484536082474226, + "FN": 52, + "FP": 13, + "IoU": 0.9019607843137255, + "TN": 1737, + "TP": 598, + "n_pred": 611, + "n_ref": 650 + }, + "2": { + "Dice": 0.7722772277227723, + "FN": 2, + "FP": 21, + "IoU": 0.6290322580645161, + "TN": 2338, + "TP": 39, + "n_pred": 60, + "n_ref": 41 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 2390, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2852262/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset296_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-30__qs-30__unc-mutual_information__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.5660094835486397, + "FN": 44.34161220043573, + "FP": 45.17407407407408, + "IoU": 0.4889314596044404, + "TN": 1157.2714596949893, + "TP": 134.6507625272331, + "n_pred": 179.8248366013072, + "n_ref": 178.99237472766885 + }, + "mean": { + "1": { + "Dice": 0.3558890051564077, + "FN": 64.17124183006536, + "FP": 75.1875816993464, + "IoU": 0.30089552225583843, + "TN": 1114.565359477124, + "TP": 127.51372549019607, + "n_pred": 202.70130718954246, + "n_ref": 191.68496732026142 + }, + "2": { + "Dice": 0.5908035681566386, + "FN": 40.80261437908497, + "FP": 26.731372549019607, + "IoU": 0.48259623975123384, + "TN": 1235.5313725490196, + "TP": 78.37254901960785, + "n_pred": 105.10392156862744, + "n_ref": 119.17516339869283 + }, + "3": { + "Dice": 0.7513358773328729, + "FN": 28.050980392156863, + "FP": 33.603267973856205, + "IoU": 0.6833026168062488, + "TN": 1121.7176470588233, + "TP": 198.0660130718954, + "n_pred": 231.66928104575163, + "n_ref": 226.1169934640523 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_000/summary.json b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_000/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..aec818e9168800d4a35583fca49fec18989491c8 --- /dev/null +++ b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_000/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.6206519435766674, + "FN": 2287.36, + "FP": 9853.78, + "IoU": 0.49307486627182096, + "TN": 834380.7466666667, + "TP": 7906.753333333334, + "n_pred": 17760.533333333333, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.3675665701041035, + "FN": 2000.92, + "FP": 25365.98, + "IoU": 0.24418824672421874, + "TN": 819208.6, + "TP": 7853.14, + "n_pred": 33219.12, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.6763724713620366, + "FN": 3169.06, + "FP": 2752.62, + "IoU": 0.5259062036892362, + "TN": 841620.52, + "TP": 6886.44, + "n_pred": 9639.06, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8180167892638621, + "FN": 1692.1, + "FP": 1442.74, + "IoU": 0.7091301484020077, + "TN": 842313.12, + "TP": 8980.68, + "n_pred": 10423.42, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.43407118235807135, + "FN": 994, + "FP": 26260, + "IoU": 0.27719726303506076, + "TN": 1068214, + "TP": 10452, + "n_pred": 36712, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8035151600028009, + "FN": 1981, + "FP": 3631, + "IoU": 0.6715631766840288, + "TN": 1088833, + "TP": 11475, + "n_pred": 15106, + "n_ref": 13456 + }, + "3": { + "Dice": 0.8809275164638435, + "FN": 3541, + "FP": 2046, + "IoU": 0.7871943322922221, + "TN": 1079666, + "TP": 20667, + "n_pred": 22713, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2255383362475748, + "FN": 170, + "FP": 32163, + "IoU": 0.12710240004319537, + "TN": 1068879, + "TP": 4708, + "n_pred": 36871, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8156788962057071, + "FN": 2974, + "FP": 2904, + "IoU": 0.6887312010167338, + "TN": 1087036, + "TP": 13006, + "n_pred": 15910, + "n_ref": 15980 + }, + "3": { + "Dice": 0.8679661838350116, + "FN": 2363, + "FP": 2541, + "IoU": 0.7667316748323265, + "TN": 1084897, + "TP": 16119, + "n_pred": 18660, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1477975016436555, + "FN": 5498, + "FP": 33388, + "IoU": 0.07979554167258271, + "TN": 867182, + "TP": 3372, + "n_pred": 36760, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8407696704134121, + "FN": 2753, + "FP": 1426, + "IoU": 0.7252826715750723, + "TN": 894228, + "TP": 11033, + "n_pred": 12459, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9512200985695396, + "FN": 1629, + "FP": 400, + "IoU": 0.9069778103796076, + "TN": 887628, + "TP": 19783, + "n_pred": 20183, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.09849904074032276, + "FN": 4796, + "FP": 35145, + "IoU": 0.05180067896398642, + "TN": 867317, + "TP": 2182, + "n_pred": 37327, + "n_ref": 6978 + }, + "2": { + "Dice": 0.827482122965252, + "FN": 2810, + "FP": 1991, + "IoU": 0.7057309224639902, + "TN": 893125, + "TP": 11514, + "n_pred": 13505, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9421925059200446, + "FN": 1724, + "FP": 351, + "IoU": 0.890703186726363, + "TN": 890455, + "TP": 16910, + "n_pred": 17261, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5916387481938997, + "FN": 5547, + "FP": 20172, + "IoU": 0.4200901916572717, + "TN": 1381410, + "TP": 18631, + "n_pred": 38803, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8125104420757175, + "FN": 2926, + "FP": 2685, + "IoU": 0.6842253362597782, + "TN": 1407991, + "TP": 12158, + "n_pred": 14843, + "n_ref": 15084 + }, + "3": { + "Dice": 0.8975136189244759, + "FN": 4105, + "FP": 730, + "IoU": 0.8140813658386526, + "TN": 1399754, + "TP": 21171, + "n_pred": 21901, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5108043110358956, + "FN": 3213, + "FP": 24248, + "IoU": 0.3430068424326523, + "TN": 1383962, + "TP": 14337, + "n_pred": 38585, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8148439548911618, + "FN": 2640, + "FP": 3008, + "IoU": 0.687541491480416, + "TN": 1407684, + "TP": 12428, + "n_pred": 15436, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9050205450337694, + "FN": 3538, + "FP": 484, + "IoU": 0.8265182884748102, + "TN": 1402576, + "TP": 19162, + "n_pred": 19646, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.32517860014242067, + "FN": 2180, + "FP": 27197, + "IoU": 0.19415718008503635, + "TN": 725593, + "TP": 7078, + "n_pred": 34275, + "n_ref": 9258 + }, + "2": { + "Dice": 0.7524892540399369, + "FN": 2495, + "FP": 2054, + "IoU": 0.6031926029309141, + "TN": 750584, + "TP": 6915, + "n_pred": 8969, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9162344398340249, + "FN": 1884, + "FP": 700, + "IoU": 0.8454175640105288, + "TN": 745332, + "TP": 14132, + "n_pred": 14832, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.19504578039605366, + "FN": 796, + "FP": 33227, + "IoU": 0.10806134486826582, + "TN": 723903, + "TP": 4122, + "n_pred": 37349, + "n_ref": 4918 + }, + "2": { + "Dice": 0.7381465517241379, + "FN": 3703, + "FP": 1643, + "IoU": 0.5849701110162254, + "TN": 749167, + "TP": 7535, + "n_pred": 9178, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9035954346551179, + "FN": 1897, + "FP": 240, + "IoU": 0.8241441737985516, + "TN": 749896, + "TP": 10015, + "n_pred": 10255, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.14129497395563834, + "FN": 9748, + "FP": 40038, + "IoU": 0.07601796518317805, + "TN": 1024390, + "TP": 4096, + "n_pred": 44134, + "n_ref": 13844 + }, + "2": { + "Dice": 0.5747674052766416, + "FN": 3476, + "FP": 5985, + "IoU": 0.4032797224850205, + "TN": 1062417, + "TP": 6394, + "n_pred": 12379, + "n_ref": 9870 + }, + "3": { + "Dice": 0.6702186168018699, + "FN": 8655, + "FP": 939, + "IoU": 0.5040066173809646, + "TN": 1058929, + "TP": 9749, + "n_pred": 10688, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.13696686564581712, + "FN": 9338, + "FP": 40541, + "IoU": 0.0735182123818192, + "TN": 1024435, + "TP": 3958, + "n_pred": 44499, + "n_ref": 13296 + }, + "2": { + "Dice": 0.612013201320132, + "FN": 3846, + "FP": 4971, + "IoU": 0.44093589499714664, + "TN": 1062501, + "TP": 6954, + "n_pred": 11925, + "n_ref": 10800 + }, + "3": { + "Dice": 0.674538323255434, + "FN": 6971, + "FP": 995, + "IoU": 0.5089082054127366, + "TN": 1062051, + "TP": 8255, + "n_pred": 9250, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4271286835480527, + "FN": 1921, + "FP": 17422, + "IoU": 0.2715598403253747, + "TN": 1079366, + "TP": 7211, + "n_pred": 24633, + "n_ref": 9132 + }, + "2": { + "Dice": 0.7676860261644863, + "FN": 2269, + "FP": 3307, + "IoU": 0.62296301305024, + "TN": 1091131, + "TP": 9213, + "n_pred": 12520, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8485104942450914, + "FN": 1470, + "FP": 2110, + "IoU": 0.7368807878876966, + "TN": 1092314, + "TP": 10026, + "n_pred": 12136, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.14174802572390124, + "FN": 925, + "FP": 24832, + "IoU": 0.07628030411705637, + "TN": 1078036, + "TP": 2127, + "n_pred": 26959, + "n_ref": 3052 + }, + "2": { + "Dice": 0.6840654751962586, + "FN": 4161, + "FP": 3405, + "IoU": 0.5198324554166402, + "TN": 1090163, + "TP": 8191, + "n_pred": 11596, + "n_ref": 12352 + }, + "3": { + "Dice": 0.6059671914565672, + "FN": 528, + "FP": 3051, + "IoU": 0.4346864634338967, + "TN": 1099589, + "TP": 2752, + "n_pred": 5803, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.40148609779482264, + "FN": 789, + "FP": 24181, + "IoU": 0.25116209326735645, + "TN": 1113535, + "TP": 8375, + "n_pred": 32556, + "n_ref": 9164 + }, + "2": { + "Dice": 0.7829208802652854, + "FN": 5132, + "FP": 2789, + "IoU": 0.6432785408691736, + "TN": 1124675, + "TP": 14284, + "n_pred": 17073, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9122625215889465, + "FN": 1366, + "FP": 666, + "IoU": 0.8386789456970467, + "TN": 1134284, + "TP": 10564, + "n_pred": 11230, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.07247046041015891, + "FN": 1132, + "FP": 33015, + "IoU": 0.037597587441165696, + "TN": 1111399, + "TP": 1334, + "n_pred": 34349, + "n_ref": 2466 + }, + "2": { + "Dice": 0.44867509826465946, + "FN": 16046, + "FP": 4573, + "IoU": 0.28922058671446793, + "TN": 1117871, + "TP": 8390, + "n_pred": 12963, + "n_ref": 24436 + }, + "3": { + "Dice": 0.38004846526655894, + "FN": 834, + "FP": 5306, + "IoU": 0.23460483669907753, + "TN": 1138858, + "TP": 1882, + "n_pred": 7188, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4113844914913006, + "FN": 2140, + "FP": 25635, + "IoU": 0.25895787198847414, + "TN": 763319, + "TP": 9706, + "n_pred": 35341, + "n_ref": 11846 + }, + "2": { + "Dice": 0.7538722016680254, + "FN": 2623, + "FP": 1302, + "IoU": 0.6049718196457327, + "TN": 790864, + "TP": 6011, + "n_pred": 7313, + "n_ref": 8634 + }, + "3": { + "Dice": 0.8974762414248851, + "FN": 1523, + "FP": 106, + "IoU": 0.8140198652814248, + "TN": 792041, + "TP": 7130, + "n_pred": 7236, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.16631250885394533, + "FN": 417, + "FP": 34893, + "IoU": 0.09069839307787392, + "TN": 761968, + "TP": 3522, + "n_pred": 38415, + "n_ref": 3939 + }, + "2": { + "Dice": 0.7591620604765665, + "FN": 4480, + "FP": 705, + "IoU": 0.6118140300965785, + "TN": 787443, + "TP": 8172, + "n_pred": 8877, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8215189873417722, + "FN": 250, + "FP": 878, + "IoU": 0.6970998925886144, + "TN": 797076, + "TP": 2596, + "n_pred": 3474, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5826849392350909, + "FN": 1798, + "FP": 15955, + "IoU": 0.4111188509636116, + "TN": 1317693, + "TP": 12394, + "n_pred": 28349, + "n_ref": 14192 + }, + "2": { + "Dice": 0.7861288450377248, + "FN": 2479, + "FP": 1943, + "IoU": 0.6476213244083194, + "TN": 1335291, + "TP": 8127, + "n_pred": 10070, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9093460224499756, + "FN": 2422, + "FP": 550, + "IoU": 0.8337621657903569, + "TN": 1329962, + "TP": 14906, + "n_pred": 15456, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3161651292907909, + "FN": 641, + "FP": 21970, + "IoU": 0.18776492564120986, + "TN": 1320002, + "TP": 5227, + "n_pred": 27197, + "n_ref": 5868 + }, + "2": { + "Dice": 0.7852018324833607, + "FN": 3030, + "FP": 1940, + "IoU": 0.6463640244770172, + "TN": 1333786, + "TP": 9084, + "n_pred": 11024, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9024401285707818, + "FN": 1651, + "FP": 504, + "IoU": 0.8222240554363967, + "TN": 1335718, + "TP": 9967, + "n_pred": 10471, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49500998003992014, + "FN": 1798, + "FP": 19960, + "IoU": 0.32891246684350134, + "TN": 819546, + "TP": 10664, + "n_pred": 30624, + "n_ref": 12462 + }, + "2": { + "Dice": 0.6693205659260854, + "FN": 3227, + "FP": 2920, + "IoU": 0.5029915912031048, + "TN": 839600, + "TP": 6221, + "n_pred": 9141, + "n_ref": 9448 + }, + "3": { + "Dice": 0.8305798703432618, + "FN": 4587, + "FP": 1084, + "IoU": 0.7102493357858165, + "TN": 832396, + "TP": 13901, + "n_pred": 14985, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3271528418831597, + "FN": 736, + "FP": 24775, + "IoU": 0.1955664869296503, + "TN": 820255, + "TP": 6202, + "n_pred": 30977, + "n_ref": 6938 + }, + "2": { + "Dice": 0.7203532178336612, + "FN": 3787, + "FP": 2040, + "IoU": 0.5629312931293129, + "TN": 838636, + "TP": 7505, + "n_pred": 9545, + "n_ref": 11292 + }, + "3": { + "Dice": 0.833079738454579, + "FN": 2867, + "FP": 1192, + "IoU": 0.7139131660558218, + "TN": 837780, + "TP": 10129, + "n_pred": 11321, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.17123363533659702, + "FN": 1991, + "FP": 35422, + "IoU": 0.09363341247153448, + "TN": 810690, + "TP": 3865, + "n_pred": 39287, + "n_ref": 5856 + }, + "2": { + "Dice": 0.595545591890443, + "FN": 4610, + "FP": 3689, + "IoU": 0.42404053022416544, + "TN": 837559, + "TP": 6110, + "n_pred": 9799, + "n_ref": 10720 + }, + "3": { + "Dice": 0.8192585895117541, + "FN": 3895, + "FP": 103, + "IoU": 0.6938509839957118, + "TN": 838909, + "TP": 9061, + "n_pred": 9164, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.06276811921426959, + "FN": 714, + "FP": 40796, + "IoU": 0.0324009324009324, + "TN": 809068, + "TP": 1390, + "n_pred": 42186, + "n_ref": 2104 + }, + "2": { + "Dice": 0.6364774044032445, + "FN": 5720, + "FP": 2123, + "IoU": 0.46678904072336663, + "TN": 837259, + "TP": 6866, + "n_pred": 8989, + "n_ref": 12586 + }, + "3": { + "Dice": 0.8681789540012602, + "FN": 1857, + "FP": 235, + "IoU": 0.7670638013584233, + "TN": 842987, + "TP": 6889, + "n_pred": 7124, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3111304196715614, + "FN": 4136, + "FP": 35505, + "IoU": 0.18422406519457535, + "TN": 748447, + "TP": 8952, + "n_pred": 44457, + "n_ref": 13088 + }, + "2": { + "Dice": 0.6469902006532898, + "FN": 3308, + "FP": 2744, + "IoU": 0.4781858941196758, + "TN": 785442, + "TP": 5546, + "n_pred": 8290, + "n_ref": 8854 + }, + "3": { + "Dice": 0.8730823975960779, + "FN": 2417, + "FP": 793, + "IoU": 0.7747526489369168, + "TN": 782789, + "TP": 11041, + "n_pred": 11834, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.20567885364285984, + "FN": 2228, + "FP": 39790, + "IoU": 0.1146276707825867, + "TN": 749582, + "TP": 5440, + "n_pred": 45230, + "n_ref": 7668 + }, + "2": { + "Dice": 0.6682224815246985, + "FN": 3609, + "FP": 2362, + "IoU": 0.5017523364485982, + "TN": 785056, + "TP": 6013, + "n_pred": 8375, + "n_ref": 9622 + }, + "3": { + "Dice": 0.8624094047822861, + "FN": 1476, + "FP": 935, + "IoU": 0.7581017357279021, + "TN": 787073, + "TP": 7556, + "n_pred": 8491, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.44058788659266984, + "FN": 1691, + "FP": 25676, + "IoU": 0.28253460570469796, + "TN": 858526, + "TP": 10777, + "n_pred": 36453, + "n_ref": 12468 + }, + "2": { + "Dice": 0.6665954720205041, + "FN": 4096, + "FP": 2148, + "IoU": 0.4999199102995355, + "TN": 884184, + "TP": 6242, + "n_pred": 8390, + "n_ref": 10338 + }, + "3": { + "Dice": 0.8795974601653289, + "FN": 1239, + "FP": 1776, + "IoU": 0.7850727117194183, + "TN": 882642, + "TP": 11013, + "n_pred": 12789, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2727419317684458, + "FN": 436, + "FP": 31135, + "IoU": 0.15790456376196954, + "TN": 859179, + "TP": 5920, + "n_pred": 37055, + "n_ref": 6356 + }, + "2": { + "Dice": 0.7220220030349014, + "FN": 3905, + "FP": 1957, + "IoU": 0.5649721706864564, + "TN": 883195, + "TP": 7613, + "n_pred": 9570, + "n_ref": 11518 + }, + "3": { + "Dice": 0.8771375359783283, + "FN": 1055, + "FP": 1122, + "IoU": 0.7811620426216325, + "TN": 886722, + "TP": 7771, + "n_pred": 8893, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4865677162805752, + "FN": 697, + "FP": 21511, + "IoU": 0.3214994958907458, + "TN": 729317, + "TP": 10523, + "n_pred": 32034, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8002118083134763, + "FN": 2856, + "FP": 917, + "IoU": 0.6669608968134875, + "TN": 750719, + "TP": 7556, + "n_pred": 8473, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9283695037620145, + "FN": 1079, + "FP": 568, + "IoU": 0.8663149350649351, + "TN": 749728, + "TP": 10673, + "n_pred": 11241, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.19557215257401975, + "FN": 126, + "FP": 30032, + "IoU": 0.10838457899716178, + "TN": 728224, + "TP": 3666, + "n_pred": 33698, + "n_ref": 3792 + }, + "2": { + "Dice": 0.7538852783272111, + "FN": 3628, + "FP": 1598, + "IoU": 0.6049886621315193, + "TN": 748818, + "TP": 8004, + "n_pred": 9602, + "n_ref": 11632 + }, + "3": { + "Dice": 0.8697147771248388, + "FN": 766, + "FP": 1052, + "IoU": 0.7694648744610703, + "TN": 754162, + "TP": 6068, + "n_pred": 7120, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.34546224291985117, + "FN": 190, + "FP": 29185, + "IoU": 0.20879683249387238, + "TN": 958201, + "TP": 7752, + "n_pred": 36937, + "n_ref": 7942 + }, + "2": { + "Dice": 0.6045907769007063, + "FN": 2927, + "FP": 4687, + "IoU": 0.43327130628954225, + "TN": 981893, + "TP": 5821, + "n_pred": 10508, + "n_ref": 8748 + }, + "3": { + "Dice": 0.880504271972277, + "FN": 1809, + "FP": 2191, + "IoU": 0.7865186529327, + "TN": 976591, + "TP": 14737, + "n_pred": 16928, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.14858855612608407, + "FN": 218, + "FP": 34437, + "IoU": 0.08025690703044136, + "TN": 957649, + "TP": 3024, + "n_pred": 37461, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7563704852647906, + "FN": 1507, + "FP": 2891, + "IoU": 0.6081959910913141, + "TN": 984103, + "TP": 6827, + "n_pred": 9718, + "n_ref": 8334 + }, + "3": { + "Dice": 0.8772657111356119, + "FN": 668, + "FP": 2115, + "IoU": 0.7813653861261686, + "TN": 982599, + "TP": 9946, + "n_pred": 12061, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7081368083443388, + "FN": 1187, + "FP": 9642, + "IoU": 0.5481515480263707, + "TN": 734050, + "TP": 13137, + "n_pred": 22779, + "n_ref": 14324 + }, + "2": { + "Dice": 0.7367872044506258, + "FN": 2455, + "FP": 2087, + "IoU": 0.5832645196807047, + "TN": 747117, + "TP": 6357, + "n_pred": 8444, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9063820518405576, + "FN": 899, + "FP": 1250, + "IoU": 0.8287922243467176, + "TN": 745464, + "TP": 10403, + "n_pred": 11653, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3202906839821014, + "FN": 476, + "FP": 19727, + "IoU": 0.19068220967031208, + "TN": 733053, + "TP": 4760, + "n_pred": 24487, + "n_ref": 5236 + }, + "2": { + "Dice": 0.7982702459844996, + "FN": 2225, + "FP": 1367, + "IoU": 0.6642676885690252, + "TN": 747317, + "TP": 7107, + "n_pred": 8474, + "n_ref": 9332 + }, + "3": { + "Dice": 0.7978777675747373, + "FN": 282, + "FP": 1699, + "IoU": 0.6637243252418944, + "TN": 752125, + "TP": 3910, + "n_pred": 5609, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2288181552709524, + "FN": 2461, + "FP": 34511, + "IoU": 0.1291895329392091, + "TN": 596519, + "TP": 5485, + "n_pred": 39996, + "n_ref": 7946 + }, + "2": { + "Dice": 0.6340456890198969, + "FN": 1064, + "FP": 3902, + "IoU": 0.46417781614156234, + "TN": 629708, + "TP": 4302, + "n_pred": 8204, + "n_ref": 5366 + }, + "3": { + "Dice": 0.7984041588587318, + "FN": 730, + "FP": 2605, + "IoU": 0.6644531643022437, + "TN": 629037, + "TP": 6604, + "n_pred": 9209, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.10000455394143631, + "FN": 824, + "FP": 38702, + "IoU": 0.052634101912659985, + "TN": 597254, + "TP": 2196, + "n_pred": 40898, + "n_ref": 3020 + }, + "2": { + "Dice": 0.6633847631626343, + "FN": 1827, + "FP": 3780, + "IoU": 0.4963169241825368, + "TN": 627844, + "TP": 5525, + "n_pred": 9305, + "n_ref": 7352 + }, + "3": { + "Dice": 0.45878418256934883, + "FN": 424, + "FP": 5078, + "IoU": 0.297676793464386, + "TN": 631142, + "TP": 2332, + "n_pred": 7410, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5358184505973071, + "FN": 2029, + "FP": 21207, + "IoU": 0.3659508281714738, + "TN": 946393, + "TP": 13411, + "n_pred": 34618, + "n_ref": 15440 + }, + "2": { + "Dice": 0.7283427495291902, + "FN": 2161, + "FP": 3609, + "IoU": 0.5727508330248057, + "TN": 969535, + "TP": 7735, + "n_pred": 11344, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9449915232839159, + "FN": 119, + "FP": 1406, + "IoU": 0.8957193654266958, + "TN": 968416, + "TP": 13099, + "n_pred": 14505, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.24608709127537579, + "FN": 630, + "FP": 33425, + "IoU": 0.1403074748188726, + "TN": 943427, + "TP": 5558, + "n_pred": 38983, + "n_ref": 6188 + }, + "2": { + "Dice": 0.6073049938093272, + "FN": 4070, + "FP": 3542, + "IoU": 0.43606460216328347, + "TN": 969542, + "TP": 5886, + "n_pred": 9428, + "n_ref": 9956 + }, + "3": { + "Dice": 0.6856729552166837, + "FN": 302, + "FP": 4913, + "IoU": 0.5216912776300101, + "TN": 972137, + "TP": 5688, + "n_pred": 10601, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4513272863443455, + "FN": 2621, + "FP": 30346, + "IoU": 0.2914284486093797, + "TN": 1002050, + "TP": 13559, + "n_pred": 43905, + "n_ref": 16180 + }, + "2": { + "Dice": 0.7131887226052351, + "FN": 2346, + "FP": 2771, + "IoU": 0.5542294624967332, + "TN": 1037097, + "TP": 6362, + "n_pred": 9133, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9105410294359481, + "FN": 1186, + "FP": 990, + "IoU": 0.8357735849056603, + "TN": 1035326, + "TP": 11074, + "n_pred": 12064, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.20139921997507138, + "FN": 421, + "FP": 39303, + "IoU": 0.11197549907227326, + "TN": 1003843, + "TP": 5009, + "n_pred": 44312, + "n_ref": 5430 + }, + "2": { + "Dice": 0.763983220135837, + "FN": 2673, + "FP": 2053, + "IoU": 0.6181010101010102, + "TN": 1036201, + "TP": 7649, + "n_pred": 9702, + "n_ref": 10322 + }, + "3": { + "Dice": 0.8933644677952909, + "FN": 489, + "FP": 607, + "IoU": 0.8072797608580974, + "TN": 1042889, + "TP": 4591, + "n_pred": 5198, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5399537182527212, + "FN": 1712, + "FP": 14391, + "IoU": 0.36981959065471764, + "TN": 463663, + "TP": 9450, + "n_pred": 23841, + "n_ref": 11162 + }, + "2": { + "Dice": 0.43988963342530546, + "FN": 1043, + "FP": 3220, + "IoU": 0.28196058615462355, + "TN": 483279, + "TP": 1674, + "n_pred": 4894, + "n_ref": 2717 + }, + "3": { + "Dice": 0.7857873686168728, + "FN": 427, + "FP": 1876, + "IoU": 0.6471579592462081, + "TN": 482689, + "TP": 4224, + "n_pred": 6100, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3875136629589147, + "FN": 624, + "FP": 18428, + "IoU": 0.240320586945253, + "TN": 464137, + "TP": 6027, + "n_pred": 24455, + "n_ref": 6651 + }, + "2": { + "Dice": 0.5620681439123183, + "FN": 1001, + "FP": 2675, + "IoU": 0.3908864954432477, + "TN": 483181, + "TP": 2359, + "n_pred": 5034, + "n_ref": 3360 + }, + "3": { + "Dice": 0.6074950690335306, + "FN": 96, + "FP": 2093, + "IoU": 0.43626062322946174, + "TN": 485333, + "TP": 1694, + "n_pred": 3787, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7805581756644288, + "FN": 1808, + "FP": 6102, + "IoU": 0.6400946400946401, + "TN": 458502, + "TP": 14068, + "n_pred": 20170, + "n_ref": 15876 + }, + "2": { + "Dice": 0.6774224900379046, + "FN": 1034, + "FP": 2285, + "IoU": 0.512198706643151, + "TN": 473676, + "TP": 3485, + "n_pred": 5770, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9099086236436322, + "FN": 587, + "FP": 675, + "IoU": 0.8347085789129011, + "TN": 472845, + "TP": 6373, + "n_pred": 7048, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6778256329939963, + "FN": 1224, + "FP": 8650, + "IoU": 0.5126597897438429, + "TN": 460219, + "TP": 10387, + "n_pred": 19037, + "n_ref": 11611 + }, + "2": { + "Dice": 0.6874550682961897, + "FN": 1837, + "FP": 1641, + "IoU": 0.5237573599890456, + "TN": 473177, + "TP": 3825, + "n_pred": 5466, + "n_ref": 5662 + }, + "3": { + "Dice": 0.7326355851569933, + "FN": 111, + "FP": 1856, + "IoU": 0.5780780780780781, + "TN": 475818, + "TP": 2695, + "n_pred": 4551, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6175237443313083, + "FN": 6238, + "FP": 11642, + "IoU": 0.4466794578201399, + "TN": 612326, + "TP": 14434, + "n_pred": 26076, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7150546969960062, + "FN": 2889, + "FP": 2034, + "IoU": 0.5564864864864865, + "TN": 633540, + "TP": 6177, + "n_pred": 8211, + "n_ref": 9066 + }, + "3": { + "Dice": 0.83857851508498, + "FN": 3686, + "FP": 284, + "IoU": 0.7220277272090744, + "TN": 630358, + "TP": 10312, + "n_pred": 10596, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5441138949839261, + "FN": 4669, + "FP": 13199, + "IoU": 0.3737338333742245, + "TN": 616109, + "TP": 10663, + "n_pred": 23862, + "n_ref": 15332 + }, + "2": { + "Dice": 0.7641186537364518, + "FN": 4129, + "FP": 833, + "IoU": 0.6182783291022387, + "TN": 631641, + "TP": 8037, + "n_pred": 8870, + "n_ref": 12166 + }, + "3": { + "Dice": 0.8571625724537676, + "FN": 1351, + "FP": 719, + "IoU": 0.7500301895906292, + "TN": 636359, + "TP": 6211, + "n_pred": 6930, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7551479359367972, + "FN": 2744, + "FP": 9777, + "IoU": 0.6066166074963084, + "TN": 532651, + "TP": 19308, + "n_pred": 29085, + "n_ref": 22052 + }, + "2": { + "Dice": 0.5652974765150119, + "FN": 1400, + "FP": 3320, + "IoU": 0.3940172037488766, + "TN": 556691, + "TP": 3069, + "n_pred": 6389, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9121621621621622, + "FN": 742, + "FP": 636, + "IoU": 0.8385093167701864, + "TN": 555947, + "TP": 7155, + "n_pred": 7791, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4504210495643812, + "FN": 703, + "FP": 18158, + "IoU": 0.29067318540804815, + "TN": 537890, + "TP": 7729, + "n_pred": 25887, + "n_ref": 8432 + }, + "2": { + "Dice": 0.6527057079318014, + "FN": 1341, + "FP": 2407, + "IoU": 0.4844566712517194, + "TN": 557210, + "TP": 3522, + "n_pred": 5929, + "n_ref": 4863 + }, + "3": { + "Dice": 0.849485080538685, + "FN": 235, + "FP": 905, + "IoU": 0.7383520771172826, + "TN": 560123, + "TP": 3217, + "n_pred": 4122, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3931829388560158, + "FN": 1196, + "FP": 18494, + "IoU": 0.24469676627411868, + "TN": 392811, + "TP": 6379, + "n_pred": 24873, + "n_ref": 7575 + }, + "2": { + "Dice": 0.12086590499098016, + "FN": 2253, + "FP": 6519, + "IoU": 0.06432, + "TN": 409505, + "TP": 603, + "n_pred": 7122, + "n_ref": 2856 + }, + "3": { + "Dice": 0.6223741079505478, + "FN": 1103, + "FP": 2654, + "IoU": 0.4517729461549686, + "TN": 412027, + "TP": 3096, + "n_pred": 5750, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2772544628153613, + "FN": 528, + "FP": 21416, + "IoU": 0.16093755974457996, + "TN": 392727, + "TP": 4209, + "n_pred": 25625, + "n_ref": 4737 + }, + "2": { + "Dice": 0.1535221648941771, + "FN": 2264, + "FP": 5775, + "IoU": 0.08314324817518248, + "TN": 410112, + "TP": 729, + "n_pred": 6504, + "n_ref": 2993 + }, + "3": { + "Dice": 0.5602635125018716, + "FN": 512, + "FP": 2425, + "IoU": 0.3891430948419301, + "TN": 414072, + "TP": 1871, + "n_pred": 4296, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7161765102299378, + "FN": 282, + "FP": 10247, + "IoU": 0.5578465544030572, + "TN": 472697, + "TP": 13284, + "n_pred": 23531, + "n_ref": 13566 + }, + "2": { + "Dice": 0.6871944545786209, + "FN": 2963, + "FP": 1324, + "IoU": 0.5234548688305913, + "TN": 487514, + "TP": 4709, + "n_pred": 6033, + "n_ref": 7672 + }, + "3": { + "Dice": 0.8789792663476874, + "FN": 883, + "FP": 1014, + "IoU": 0.7840883223309811, + "TN": 487724, + "TP": 6889, + "n_pred": 7903, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6580645161290323, + "FN": 665, + "FP": 12426, + "IoU": 0.49038461538461536, + "TN": 470822, + "TP": 12597, + "n_pred": 25023, + "n_ref": 13262 + }, + "2": { + "Dice": 0.547207219525535, + "FN": 4474, + "FP": 2149, + "IoU": 0.37665882352941177, + "TN": 485885, + "TP": 4002, + "n_pred": 6151, + "n_ref": 8476 + }, + "3": { + "Dice": 0.663813912661839, + "FN": 375, + "FP": 2689, + "IoU": 0.49679750369518805, + "TN": 490421, + "TP": 3025, + "n_pred": 5714, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_000/summary_cross_val.json b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_000/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..a9b29780547e5ac8bbd04bc9b483c71b48e4b0a7 --- /dev/null +++ b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_000/summary_cross_val.json @@ -0,0 +1,2292 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.6281055998435088, + "FN": 41.72727272727273, + "FP": 15.93939393939394, + "IoU": 0.5377064640986574, + "TN": 690.5757575757576, + "TP": 124.4848484848485, + "n_pred": 140.4242424242424, + "n_ref": 166.21212121212122 + }, + "mean": { + "1": { + "Dice": 0.5323434544872774, + "FN": 65.81818181818181, + "FP": 10.636363636363637, + "IoU": 0.44101950584821187, + "TN": 658.0909090909091, + "TP": 138.1818181818182, + "n_pred": 148.8181818181818, + "n_ref": 204.0 + }, + "2": { + "Dice": 0.6339079006793883, + "FN": 38.45454545454545, + "FP": 31.0, + "IoU": 0.512097619133976, + "TN": 709.1818181818181, + "TP": 94.0909090909091, + "n_pred": 125.0909090909091, + "n_ref": 132.54545454545453 + }, + "3": { + "Dice": 0.7180654443638607, + "FN": 20.90909090909091, + "FP": 6.181818181818182, + "IoU": 0.6600022673137844, + "TN": 704.4545454545455, + "TP": 141.1818181818182, + "n_pred": 147.36363636363637, + "n_ref": 162.0909090909091 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.36752136752136755, + "FN": 140, + "FP": 8, + "IoU": 0.225130890052356, + "TN": 609, + "TP": 43, + "n_pred": 51, + "n_ref": 183 + }, + "2": { + "Dice": 0.6684491978609626, + "FN": 103, + "FP": 21, + "IoU": 0.5020080321285141, + "TN": 551, + "TP": 125, + "n_pred": 146, + "n_ref": 228 + }, + "3": { + "Dice": 0.9574468085106383, + "FN": 27, + "FP": 1, + "IoU": 0.9183673469387755, + "TN": 457, + "TP": 315, + "n_pred": 316, + "n_ref": 342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.23529411764705882, + "FN": 182, + "FP": 0, + "IoU": 0.13333333333333333, + "TN": 590, + "TP": 28, + "n_pred": 28, + "n_ref": 210 + }, + "2": { + "Dice": 0.6136986301369863, + "FN": 102, + "FP": 39, + "IoU": 0.4426877470355731, + "TN": 547, + "TP": 112, + "n_pred": 151, + "n_ref": 214 + }, + "3": { + "Dice": 0.9227871939736346, + "FN": 41, + "FP": 0, + "IoU": 0.8566433566433567, + "TN": 514, + "TP": 245, + "n_pred": 245, + "n_ref": 286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8057416267942584, + "FN": 203, + "FP": 0, + "IoU": 0.6746794871794872, + "TN": 176, + "TP": 421, + "n_pred": 421, + "n_ref": 624 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 43, + "IoU": 0.0, + "TN": 757, + "TP": 0, + "n_pred": 43, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 42, + "IoU": 0.0, + "TN": 758, + "TP": 0, + "n_pred": 42, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 54, + "IoU": 0.0, + "TN": 746, + "TP": 0, + "n_pred": 54, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7262247838616714, + "FN": 34, + "FP": 61, + "IoU": 0.5701357466063348, + "TN": 579, + "TP": 126, + "n_pred": 187, + "n_ref": 160 + }, + "3": { + "Dice": 0.9117647058823529, + "FN": 53, + "FP": 1, + "IoU": 0.8378378378378378, + "TN": 467, + "TP": 279, + "n_pred": 280, + "n_ref": 332 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5204301075268817, + "FN": 139, + "FP": 84, + "IoU": 0.35174418604651164, + "TN": 456, + "TP": 121, + "n_pred": 205, + "n_ref": 260 + }, + "3": { + "Dice": 0.8421052631578947, + "FN": 84, + "FP": 0, + "IoU": 0.7272727272727273, + "TN": 492, + "TP": 224, + "n_pred": 224, + "n_ref": 308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8594059405940594, + "FN": 19, + "FP": 52, + "IoU": 0.7534722222222222, + "TN": 512, + "TP": 217, + "n_pred": 269, + "n_ref": 236 + }, + "3": { + "Dice": 0.9639175257731959, + "FN": 14, + "FP": 14, + "IoU": 0.9303482587064676, + "TN": 398, + "TP": 374, + "n_pred": 388, + "n_ref": 388 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9046015712682379, + "FN": 65, + "FP": 20, + "IoU": 0.8258196721311475, + "TN": 312, + "TP": 403, + "n_pred": 423, + "n_ref": 468 + }, + "2": { + "Dice": 0.7454545454545455, + "FN": 0, + "FP": 28, + "IoU": 0.5942028985507246, + "TN": 731, + "TP": 41, + "n_pred": 69, + "n_ref": 41 + }, + "3": { + "Dice": 0.2, + "FN": 4, + "FP": 4, + "IoU": 0.1111111111111111, + "TN": 791, + "TP": 1, + "n_pred": 5, + "n_ref": 5 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8809020436927414, + "FN": 134, + "FP": 35, + "IoU": 0.7871536523929471, + "TN": 806, + "TP": 625, + "n_pred": 660, + "n_ref": 759 + }, + "2": { + "Dice": 0.9376, + "FN": 26, + "FP": 13, + "IoU": 0.8825301204819277, + "TN": 1268, + "TP": 293, + "n_pred": 306, + "n_ref": 319 + }, + "3": { + "Dice": 0.9465020576131687, + "FN": 7, + "FP": 6, + "IoU": 0.8984375, + "TN": 1472, + "TP": 115, + "n_pred": 121, + "n_ref": 122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.3777696412528761, + "FN": 34.36363636363636, + "FP": 8.484848484848486, + "IoU": 0.2978578873760405, + "TN": 804.7878787878789, + "TP": 25.09090909090909, + "n_pred": 33.57575757575757, + "n_ref": 59.454545454545446 + }, + "mean": { + "1": { + "Dice": 0.4208319911235191, + "FN": 11.818181818181818, + "FP": 17.0, + "IoU": 0.3636054331002828, + "TN": 802.0, + "TP": 41.90909090909091, + "n_pred": 58.90909090909091, + "n_ref": 53.72727272727273 + }, + "2": { + "Dice": 0.22770707332240125, + "FN": 73.81818181818181, + "FP": 4.818181818181818, + "IoU": 0.167843536218778, + "TN": 782.9090909090909, + "TP": 11.181818181818182, + "n_pred": 16.0, + "n_ref": 85.0 + }, + "3": { + "Dice": 0.484769859312708, + "FN": 17.454545454545453, + "FP": 3.6363636363636362, + "IoU": 0.3621246928090608, + "TN": 829.4545454545455, + "TP": 22.181818181818183, + "n_pred": 25.818181818181817, + "n_ref": 39.63636363636363 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8201438848920863, + "FN": 50, + "FP": 0, + "IoU": 0.6951219512195121, + "TN": 636, + "TP": 114, + "n_pred": 114, + "n_ref": 164 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.3063063063063063, + "FN": 77, + "FP": 0, + "IoU": 0.18085106382978725, + "TN": 706, + "TP": 17, + "n_pred": 17, + "n_ref": 94 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.2463768115942029, + "FN": 180, + "FP": 28, + "IoU": 0.14049586776859505, + "TN": 558, + "TP": 34, + "n_pred": 62, + "n_ref": 214 + }, + "3": { + "Dice": 0.7350993377483444, + "FN": 160, + "FP": 0, + "IoU": 0.581151832460733, + "TN": 418, + "TP": 222, + "n_pred": 222, + "n_ref": 382 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 37, + "IoU": 0.0, + "TN": 763, + "TP": 0, + "n_pred": 37, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 526, + "FP": 0, + "IoU": 0.0, + "TN": 274, + "TP": 0, + "n_pred": 0, + "n_ref": 526 + }, + "3": { + "Dice": 0.5373134328358209, + "FN": 28, + "FP": 3, + "IoU": 0.3673469387755102, + "TN": 751, + "TP": 18, + "n_pred": 21, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8631840796019901, + "FN": 80, + "FP": 30, + "IoU": 0.7592997811816192, + "TN": 1143, + "TP": 347, + "n_pred": 377, + "n_ref": 427 + }, + "2": { + "Dice": 0.8135593220338984, + "FN": 29, + "FP": 4, + "IoU": 0.6857142857142857, + "TN": 1495, + "TP": 72, + "n_pred": 76, + "n_ref": 101 + }, + "3": { + "Dice": 0.6666666666666666, + "FN": 4, + "FP": 0, + "IoU": 0.5, + "TN": 1592, + "TP": 4, + "n_pred": 4, + "n_ref": 8 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 789, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 146, + "IoU": 0.0, + "TN": 654, + "TP": 0, + "n_pred": 146, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 19, + "IoU": 0.0, + "TN": 781, + "TP": 0, + "n_pred": 19, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient088_frame12.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.6301105913064659, + "FN": 19.09090909090909, + "FP": 15.696969696969697, + "IoU": 0.5446134730433561, + "TN": 711.060606060606, + "TP": 54.151515151515156, + "n_pred": 69.84848484848486, + "n_ref": 73.24242424242425 + }, + "mean": { + "1": { + "Dice": 0.41937964325449517, + "FN": 41.63636363636363, + "FP": 33.54545454545455, + "IoU": 0.30559661868403365, + "TN": 675.2727272727273, + "TP": 49.54545454545455, + "n_pred": 83.0909090909091, + "n_ref": 91.18181818181819 + }, + "2": { + "Dice": 0.543080884836204, + "FN": 10.090909090909092, + "FP": 7.636363636363637, + "IoU": 0.4627021564612768, + "TN": 742.4545454545455, + "TP": 39.81818181818182, + "n_pred": 47.45454545454545, + "n_ref": 49.90909090909091 + }, + "3": { + "Dice": 0.9278712458286985, + "FN": 5.545454545454546, + "FP": 5.909090909090909, + "IoU": 0.8655416439847577, + "TN": 715.4545454545455, + "TP": 73.0909090909091, + "n_pred": 79.0, + "n_ref": 78.63636363636364 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3946308724832215, + "FN": 451, + "FP": 0, + "IoU": 0.24581939799331104, + "TN": 202, + "TP": 147, + "n_pred": 147, + "n_ref": 598 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7828877005347593, + "FN": 0, + "FP": 203, + "IoU": 0.6432337434094904, + "TN": 231, + "TP": 366, + "n_pred": 569, + "n_ref": 366 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8898809523809523, + "FN": 14, + "FP": 60, + "IoU": 0.8016085790884718, + "TN": 427, + "TP": 299, + "n_pred": 359, + "n_ref": 313 + }, + "3": { + "Dice": 0.9202586206896551, + "FN": 60, + "FP": 14, + "IoU": 0.8522954091816367, + "TN": 299, + "TP": 427, + "n_pred": 441, + "n_ref": 487 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5, + "FN": 7, + "FP": 57, + "IoU": 0.3333333333333333, + "TN": 704, + "TP": 32, + "n_pred": 89, + "n_ref": 39 + }, + "2": { + "Dice": 0.7393617021276596, + "FN": 97, + "FP": 1, + "IoU": 0.5864978902953587, + "TN": 563, + "TP": 139, + "n_pred": 140, + "n_ref": 236 + }, + "3": { + "Dice": 0.9354838709677419, + "FN": 1, + "FP": 51, + "IoU": 0.8787878787878788, + "TN": 371, + "TP": 377, + "n_pred": 428, + "n_ref": 378 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 109, + "IoU": 0.0, + "TN": 691, + "TP": 0, + "n_pred": 109, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 23, + "IoU": 0.0, + "TN": 777, + "TP": 0, + "n_pred": 23, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.6069940780762306, + "FN": 14.916666666666666, + "FP": 17.833333333333332, + "IoU": 0.5244772315531384, + "TN": 756.1666666666666, + "TP": 77.75, + "n_pred": 95.58333333333333, + "n_ref": 92.66666666666667 + }, + "mean": { + "1": { + "Dice": 0.3069875676477811, + "FN": 18.833333333333332, + "FP": 16.25, + "IoU": 0.25355686438522457, + "TN": 765.5, + "TP": 66.08333333333333, + "n_pred": 82.33333333333333, + "n_ref": 84.91666666666667 + }, + "2": { + "Dice": 0.6284238332416024, + "FN": 14.333333333333334, + "FP": 30.0, + "IoU": 0.514818954035586, + "TN": 737.0833333333334, + "TP": 85.25, + "n_pred": 115.25, + "n_ref": 99.58333333333333 + }, + "3": { + "Dice": 0.8855708333393082, + "FN": 11.583333333333334, + "FP": 7.25, + "IoU": 0.8050558762386048, + "TN": 765.9166666666666, + "TP": 81.91666666666667, + "n_pred": 89.16666666666667, + "n_ref": 93.5 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 3, + "FP": 3, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 3, + "n_ref": 3 + }, + "2": { + "Dice": 0.8280060882800608, + "FN": 94, + "FP": 19, + "IoU": 0.7064935064935065, + "TN": 415, + "TP": 272, + "n_pred": 291, + "n_ref": 366 + }, + "3": { + "Dice": 0.7635726795096323, + "FN": 126, + "FP": 9, + "IoU": 0.6175637393767706, + "TN": 447, + "TP": 218, + "n_pred": 227, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8925619834710744, + "FN": 58, + "FP": 7, + "IoU": 0.8059701492537313, + "TN": 465, + "TP": 270, + "n_pred": 277, + "n_ref": 328 + }, + "3": { + "Dice": 0.9346733668341709, + "FN": 7, + "FP": 58, + "IoU": 0.8773584905660378, + "TN": 270, + "TP": 465, + "n_pred": 523, + "n_ref": 472 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4588235294117647, + "FN": 63, + "FP": 29, + "IoU": 0.29770992366412213, + "TN": 669, + "TP": 39, + "n_pred": 68, + "n_ref": 102 + }, + "2": { + "Dice": 0.7682619647355163, + "FN": 0, + "FP": 184, + "IoU": 0.623721881390593, + "TN": 311, + "TP": 305, + "n_pred": 489, + "n_ref": 305 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 83, + "IoU": 0.0, + "TN": 717, + "TP": 0, + "n_pred": 83, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 793, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 48, + "IoU": 0.0, + "TN": 752, + "TP": 0, + "n_pred": 48, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9179375453885258, + "FN": 112, + "FP": 1, + "IoU": 0.8483221476510067, + "TN": 55, + "TP": 632, + "n_pred": 633, + "n_ref": 744 + }, + "2": { + "Dice": 0.562962962962963, + "FN": 0, + "FP": 59, + "IoU": 0.3917525773195876, + "TN": 703, + "TP": 38, + "n_pred": 97, + "n_ref": 38 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7721518987341772, + "FN": 48, + "FP": 24, + "IoU": 0.6288659793814433, + "TN": 606, + "TP": 122, + "n_pred": 146, + "n_ref": 170 + }, + "2": { + "Dice": 0.71875, + "FN": 20, + "FP": 88, + "IoU": 0.5609756097560976, + "TN": 554, + "TP": 138, + "n_pred": 226, + "n_ref": 158 + }, + "3": { + "Dice": 0.9584664536741214, + "FN": 6, + "FP": 20, + "IoU": 0.9202453987730062, + "TN": 474, + "TP": 300, + "n_pred": 320, + "n_ref": 306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient097_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.7885468561803114, + "FN": 15.969696969696969, + "FP": 12.84848484848485, + "IoU": 0.6999494961336293, + "TN": 761.5757575757576, + "TP": 82.33333333333333, + "n_pred": 95.18181818181819, + "n_ref": 98.30303030303031 + }, + "mean": { + "1": { + "Dice": 0.7006462684505598, + "FN": 5.2727272727272725, + "FP": 11.727272727272727, + "IoU": 0.6273758648758647, + "TN": 797.6363636363636, + "TP": 58.09090909090909, + "n_pred": 69.81818181818181, + "n_ref": 63.36363636363637 + }, + "2": { + "Dice": 0.7708117770996398, + "FN": 39.0, + "FP": 12.545454545454545, + "IoU": 0.6513924488966667, + "TN": 722.3636363636364, + "TP": 98.81818181818181, + "n_pred": 111.36363636363636, + "n_ref": 137.8181818181818 + }, + "3": { + "Dice": 0.8941825229907348, + "FN": 3.6363636363636362, + "FP": 14.272727272727273, + "IoU": 0.8210801746283565, + "TN": 764.7272727272727, + "TP": 90.0909090909091, + "n_pred": 104.36363636363636, + "n_ref": 93.72727272727273 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7468123861566485, + "FN": 139, + "FP": 0, + "IoU": 0.5959302325581395, + "TN": 456, + "TP": 205, + "n_pred": 205, + "n_ref": 344 + }, + "3": { + "Dice": 0.864, + "FN": 0, + "FP": 51, + "IoU": 0.7605633802816901, + "TN": 587, + "TP": 162, + "n_pred": 213, + "n_ref": 162 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9724770642201835, + "FN": 6, + "FP": 0, + "IoU": 0.9464285714285714, + "TN": 688, + "TP": 106, + "n_pred": 106, + "n_ref": 112 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8731942215088283, + "FN": 16, + "FP": 63, + "IoU": 0.7749287749287749, + "TN": 1249, + "TP": 272, + "n_pred": 335, + "n_ref": 288 + }, + "2": { + "Dice": 0.7542087542087542, + "FN": 73, + "FP": 0, + "IoU": 0.6054054054054054, + "TN": 1415, + "TP": 112, + "n_pred": 112, + "n_ref": 185 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8790123456790123, + "FN": 30, + "FP": 19, + "IoU": 0.7841409691629956, + "TN": 573, + "TP": 178, + "n_pred": 197, + "n_ref": 208 + }, + "3": { + "Dice": 0.9681528662420382, + "FN": 0, + "FP": 30, + "IoU": 0.9382716049382716, + "TN": 314, + "TP": 456, + "n_pred": 486, + "n_ref": 456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": 0.4492307692307692, + "FN": 73, + "FP": 106, + "IoU": 0.2896825396825397, + "TN": 548, + "TP": 73, + "n_pred": 179, + "n_ref": 146 + }, + "3": { + "Dice": 0.7204610951008645, + "FN": 31, + "FP": 66, + "IoU": 0.5630630630630631, + "TN": 578, + "TP": 125, + "n_pred": 191, + "n_ref": 156 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8181818181818182, + "FN": 0, + "FP": 8, + "IoU": 0.6923076923076923, + "TN": 774, + "TP": 18, + "n_pred": 26, + "n_ref": 18 + }, + "2": { + "Dice": 0.9347368421052632, + "FN": 26, + "FP": 5, + "IoU": 0.8774703557312253, + "TN": 547, + "TP": 222, + "n_pred": 227, + "n_ref": 248 + }, + "3": { + "Dice": 0.9709302325581395, + "FN": 1, + "FP": 9, + "IoU": 0.943502824858757, + "TN": 623, + "TP": 167, + "n_pred": 176, + "n_ref": 168 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8393782383419689, + "FN": 36, + "FP": 57, + "IoU": 0.7232142857142857, + "TN": 464, + "TP": 243, + "n_pred": 300, + "n_ref": 279 + }, + "2": { + "Dice": 0.8608695652173913, + "FN": 88, + "FP": 8, + "IoU": 0.7557251908396947, + "TN": 407, + "TP": 297, + "n_pred": 305, + "n_ref": 385 + }, + "3": { + "Dice": 0.9473684210526315, + "FN": 8, + "FP": 1, + "IoU": 0.9, + "TN": 710, + "TP": 81, + "n_pred": 82, + "n_ref": 89 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2860767/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.6063053533318785, + "FN": 25.213636363636365, + "FP": 14.16060606060606, + "IoU": 0.5209209104409644, + "TN": 744.8333333333333, + "TP": 72.76212121212122, + "n_pred": 86.92272727272726, + "n_ref": 97.97575757575757 + }, + "mean": { + "1": { + "Dice": 0.47603778499272653, + "FN": 28.675757575757576, + "FP": 17.831818181818182, + "IoU": 0.39823085737872355, + "TN": 739.6999999999999, + "TP": 70.7621212121212, + "n_pred": 88.5939393939394, + "n_ref": 99.4378787878788 + }, + "2": { + "Dice": 0.5607862938358472, + "FN": 35.13939393939394, + "FP": 17.2, + "IoU": 0.46177094294925675, + "TN": 738.7984848484849, + "TP": 65.83181818181818, + "n_pred": 83.03181818181818, + "n_ref": 100.97121212121212 + }, + "3": { + "Dice": 0.782091981167062, + "FN": 11.825757575757574, + "FP": 7.45, + "IoU": 0.7027609309949129, + "TN": 756.0015151515152, + "TP": 81.69242424242425, + "n_pred": 89.14242424242425, + "n_ref": 93.51818181818183 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_001/summary.json b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_001/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..10d68d2c32c588e61d6ae08033d3575b3f997483 --- /dev/null +++ b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_001/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.7525804903376958, + "FN": 2095.0733333333333, + "FP": 2499.52, + "IoU": 0.6319540868589507, + "TN": 841735.0066666667, + "TP": 8099.040000000001, + "n_pred": 10598.56, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.6288396124304438, + "FN": 2633.78, + "FP": 4844.94, + "IoU": 0.484008053786085, + "TN": 839729.64, + "TP": 7220.28, + "n_pred": 12065.22, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.760908738721462, + "FN": 2442.1, + "FP": 1721.42, + "IoU": 0.6291684320004013, + "TN": 842651.72, + "TP": 7613.4, + "n_pred": 9334.82, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8679931198611819, + "FN": 1209.34, + "FP": 932.2, + "IoU": 0.7826857747903658, + "TN": 842823.66, + "TP": 9463.44, + "n_pred": 10395.64, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7975711633663366, + "FN": 1135, + "FP": 4099, + "IoU": 0.6633000964940495, + "TN": 1090375, + "TP": 10311, + "n_pred": 14410, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8325952787754106, + "FN": 1517, + "FP": 3284, + "IoU": 0.7132019115890084, + "TN": 1089180, + "TP": 11939, + "n_pred": 15223, + "n_ref": 13456 + }, + "3": { + "Dice": 0.911404472260792, + "FN": 2219, + "FP": 2056, + "IoU": 0.8372296679865976, + "TN": 1079656, + "TP": 21989, + "n_pred": 24045, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5995531439514842, + "FN": 182, + "FP": 6091, + "IoU": 0.4281155985048774, + "TN": 1094951, + "TP": 4696, + "n_pred": 10787, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8304611951400942, + "FN": 2583, + "FP": 2887, + "IoU": 0.710075793713892, + "TN": 1087053, + "TP": 13397, + "n_pred": 16284, + "n_ref": 15980 + }, + "3": { + "Dice": 0.8799018300165395, + "FN": 1990, + "FP": 2512, + "IoU": 0.7855577784128799, + "TN": 1084926, + "TP": 16492, + "n_pred": 19004, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2403055717014033, + "FN": 5976, + "FP": 12322, + "IoU": 0.136560966402416, + "TN": 888248, + "TP": 2894, + "n_pred": 15216, + "n_ref": 8870 + }, + "2": { + "Dice": 0.848330417585761, + "FN": 2633, + "FP": 1355, + "IoU": 0.7366092067895119, + "TN": 894299, + "TP": 11153, + "n_pred": 12508, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9479566385264774, + "FN": 1649, + "FP": 521, + "IoU": 0.9010623261751698, + "TN": 887507, + "TP": 19763, + "n_pred": 20284, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1746389891696751, + "FN": 5043, + "FP": 13247, + "IoU": 0.09567367119901113, + "TN": 889215, + "TP": 1935, + "n_pred": 15182, + "n_ref": 6978 + }, + "2": { + "Dice": 0.840995691036644, + "FN": 2516, + "FP": 1949, + "IoU": 0.7256191237018375, + "TN": 893167, + "TP": 11808, + "n_pred": 13757, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9479273250186665, + "FN": 1495, + "FP": 388, + "IoU": 0.9010093575859531, + "TN": 890418, + "TP": 17139, + "n_pred": 17527, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7510479274324114, + "FN": 7246, + "FP": 3979, + "IoU": 0.6013424725645488, + "TN": 1397603, + "TP": 16932, + "n_pred": 20911, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8393368400026633, + "FN": 2478, + "FP": 2348, + "IoU": 0.7231528223955943, + "TN": 1408328, + "TP": 12606, + "n_pred": 14954, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9273382188548006, + "FN": 2878, + "FP": 632, + "IoU": 0.8645206113941639, + "TN": 1399852, + "TP": 22398, + "n_pred": 23030, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6823126887813744, + "FN": 4787, + "FP": 7098, + "IoU": 0.5178107757221682, + "TN": 1401112, + "TP": 12763, + "n_pred": 19861, + "n_ref": 17550 + }, + "2": { + "Dice": 0.839286876179322, + "FN": 2169, + "FP": 2771, + "IoU": 0.7230786479062727, + "TN": 1407921, + "TP": 12899, + "n_pred": 15670, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9312878332794233, + "FN": 2546, + "FP": 428, + "IoU": 0.8714112763749567, + "TN": 1402632, + "TP": 20154, + "n_pred": 20582, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6934298315051454, + "FN": 3126, + "FP": 2296, + "IoU": 0.5307252899428769, + "TN": 750494, + "TP": 6132, + "n_pred": 8428, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8227956989247311, + "FN": 1758, + "FP": 1538, + "IoU": 0.6989404457435148, + "TN": 751100, + "TP": 7652, + "n_pred": 9190, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9592734762662672, + "FN": 647, + "FP": 658, + "IoU": 0.921734436847787, + "TN": 745374, + "TP": 15369, + "n_pred": 16027, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6439161765923963, + "FN": 1031, + "FP": 3268, + "IoU": 0.4748350842902517, + "TN": 753862, + "TP": 3887, + "n_pred": 7155, + "n_ref": 4918 + }, + "2": { + "Dice": 0.795577986061043, + "FN": 2962, + "FP": 1291, + "IoU": 0.660547529731024, + "TN": 749519, + "TP": 8276, + "n_pred": 9567, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9365671641791045, + "FN": 1119, + "FP": 343, + "IoU": 0.8807017543859649, + "TN": 749793, + "TP": 10793, + "n_pred": 11136, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.28827529363280446, + "FN": 11046, + "FP": 2770, + "IoU": 0.16841218249668954, + "TN": 1061658, + "TP": 2798, + "n_pred": 5568, + "n_ref": 13844 + }, + "2": { + "Dice": 0.6138181141900688, + "FN": 3269, + "FP": 5037, + "IoU": 0.44281210169718926, + "TN": 1063365, + "TP": 6601, + "n_pred": 11638, + "n_ref": 9870 + }, + "3": { + "Dice": 0.7403266836256527, + "FN": 7345, + "FP": 413, + "IoU": 0.5877132380294414, + "TN": 1059455, + "TP": 11059, + "n_pred": 11472, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3110923125726975, + "FN": 10354, + "FP": 2676, + "IoU": 0.18419734535437016, + "TN": 1062300, + "TP": 2942, + "n_pred": 5618, + "n_ref": 13296 + }, + "2": { + "Dice": 0.6654598741487803, + "FN": 3080, + "FP": 4682, + "IoU": 0.4986435860999871, + "TN": 1062790, + "TP": 7720, + "n_pred": 12402, + "n_ref": 10800 + }, + "3": { + "Dice": 0.7313667729308745, + "FN": 6164, + "FP": 493, + "IoU": 0.5764997773395254, + "TN": 1062553, + "TP": 9062, + "n_pred": 9555, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.589145982330669, + "FN": 2130, + "FP": 7636, + "IoU": 0.41758110687022904, + "TN": 1089152, + "TP": 7002, + "n_pred": 14638, + "n_ref": 9132 + }, + "2": { + "Dice": 0.7908381986690075, + "FN": 1797, + "FP": 3326, + "IoU": 0.6540383576445165, + "TN": 1091112, + "TP": 9685, + "n_pred": 13011, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8504393894798806, + "FN": 1383, + "FP": 2174, + "IoU": 0.7397951719092904, + "TN": 1092250, + "TP": 10113, + "n_pred": 12287, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2913486005089059, + "FN": 991, + "FP": 9035, + "IoU": 0.17051377513030527, + "TN": 1093833, + "TP": 2061, + "n_pred": 11096, + "n_ref": 3052 + }, + "2": { + "Dice": 0.7908624480820914, + "FN": 2641, + "FP": 2495, + "IoU": 0.6540715296019398, + "TN": 1091073, + "TP": 9711, + "n_pred": 12206, + "n_ref": 12352 + }, + "3": { + "Dice": 0.6022272678127365, + "FN": 495, + "FP": 3184, + "IoU": 0.4308477722772277, + "TN": 1099456, + "TP": 2785, + "n_pred": 5969, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8596697510352231, + "FN": 756, + "FP": 1989, + "IoU": 0.7538778803909262, + "TN": 1135727, + "TP": 8408, + "n_pred": 10397, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8343046570068973, + "FN": 3812, + "FP": 2386, + "IoU": 0.7157141546647097, + "TN": 1125078, + "TP": 15604, + "n_pred": 17990, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9141636630623414, + "FN": 1658, + "FP": 271, + "IoU": 0.8418982050651586, + "TN": 1134679, + "TP": 10272, + "n_pred": 10543, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.39413382218148485, + "FN": 961, + "FP": 3666, + "IoU": 0.2454337899543379, + "TN": 1140748, + "TP": 1505, + "n_pred": 5171, + "n_ref": 2466 + }, + "2": { + "Dice": 0.7836123141753483, + "FN": 7700, + "FP": 1543, + "IoU": 0.6442126332807268, + "TN": 1120901, + "TP": 16736, + "n_pred": 18279, + "n_ref": 24436 + }, + "3": { + "Dice": 0.6160204205664276, + "FN": 182, + "FP": 2977, + "IoU": 0.4451080274020727, + "TN": 1141187, + "TP": 2534, + "n_pred": 5511, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8071557249989526, + "FN": 2213, + "FP": 2390, + "IoU": 0.676664793481315, + "TN": 786564, + "TP": 9633, + "n_pred": 12023, + "n_ref": 11846 + }, + "2": { + "Dice": 0.7546016021525103, + "FN": 2464, + "FP": 1549, + "IoU": 0.605911813807326, + "TN": 790617, + "TP": 6170, + "n_pred": 7719, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9158752527418663, + "FN": 1179, + "FP": 194, + "IoU": 0.8448061489770544, + "TN": 791953, + "TP": 7474, + "n_pred": 7668, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5264466019417475, + "FN": 550, + "FP": 5547, + "IoU": 0.3572633354417036, + "TN": 791314, + "TP": 3389, + "n_pred": 8936, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8165137614678899, + "FN": 3396, + "FP": 764, + "IoU": 0.689922480620155, + "TN": 787384, + "TP": 9256, + "n_pred": 10020, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8602804527791856, + "FN": 300, + "FP": 527, + "IoU": 0.7548176697302105, + "TN": 797427, + "TP": 2546, + "n_pred": 3073, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7524156502455251, + "FN": 2317, + "FP": 5498, + "IoU": 0.6030980192991366, + "TN": 1328150, + "TP": 11875, + "n_pred": 17373, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8474941451990632, + "FN": 1559, + "FP": 1697, + "IoU": 0.7353491018450784, + "TN": 1335537, + "TP": 9047, + "n_pred": 10744, + "n_ref": 10606 + }, + "3": { + "Dice": 0.960637246351532, + "FN": 806, + "FP": 548, + "IoU": 0.9242559856791228, + "TN": 1329964, + "TP": 16522, + "n_pred": 17070, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5125864860886207, + "FN": 645, + "FP": 9288, + "IoU": 0.3446159936658749, + "TN": 1332684, + "TP": 5223, + "n_pred": 14511, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8255179934569248, + "FN": 2273, + "FP": 1887, + "IoU": 0.702878365831012, + "TN": 1333839, + "TP": 9841, + "n_pred": 11728, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9335958005249344, + "FN": 947, + "FP": 571, + "IoU": 0.8754614816637952, + "TN": 1335651, + "TP": 10671, + "n_pred": 11242, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7470469298712356, + "FN": 1932, + "FP": 5199, + "IoU": 0.5962289791065059, + "TN": 834307, + "TP": 10530, + "n_pred": 15729, + "n_ref": 12462 + }, + "2": { + "Dice": 0.7228456014362658, + "FN": 3006, + "FP": 1934, + "IoU": 0.5659813740994553, + "TN": 840586, + "TP": 6442, + "n_pred": 8376, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9004530011325028, + "FN": 2586, + "FP": 930, + "IoU": 0.8189308888660006, + "TN": 832550, + "TP": 15902, + "n_pred": 16832, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6874755709419845, + "FN": 782, + "FP": 4815, + "IoU": 0.5237811622564451, + "TN": 840215, + "TP": 6156, + "n_pred": 10971, + "n_ref": 6938 + }, + "2": { + "Dice": 0.7959386068476978, + "FN": 2865, + "FP": 1456, + "IoU": 0.6610448697834954, + "TN": 839220, + "TP": 8427, + "n_pred": 9883, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9125992297414132, + "FN": 1385, + "FP": 839, + "IoU": 0.8392482833393567, + "TN": 838133, + "TP": 11611, + "n_pred": 12450, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.533737680060652, + "FN": 2336, + "FP": 3814, + "IoU": 0.3640124095139607, + "TN": 842298, + "TP": 3520, + "n_pred": 7334, + "n_ref": 5856 + }, + "2": { + "Dice": 0.6206386753400355, + "FN": 4423, + "FP": 3275, + "IoU": 0.44994640943194, + "TN": 837973, + "TP": 6297, + "n_pred": 9572, + "n_ref": 10720 + }, + "3": { + "Dice": 0.8298885693745507, + "FN": 3721, + "FP": 65, + "IoU": 0.7092389217418017, + "TN": 838947, + "TP": 9235, + "n_pred": 9300, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3011074528584256, + "FN": 595, + "FP": 6410, + "IoU": 0.17723749119097956, + "TN": 843454, + "TP": 1509, + "n_pred": 7919, + "n_ref": 2104 + }, + "2": { + "Dice": 0.6673477917614824, + "FN": 5401, + "FP": 1762, + "IoU": 0.5007666573738501, + "TN": 837620, + "TP": 7185, + "n_pred": 8947, + "n_ref": 12586 + }, + "3": { + "Dice": 0.8834927025666834, + "FN": 1724, + "FP": 128, + "IoU": 0.7913004282172639, + "TN": 843094, + "TP": 7022, + "n_pred": 7150, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4787628278221209, + "FN": 6370, + "FP": 8258, + "IoU": 0.31471938536493954, + "TN": 775694, + "TP": 6718, + "n_pred": 14976, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7050578203480902, + "FN": 2818, + "FP": 2232, + "IoU": 0.5444705033375429, + "TN": 785954, + "TP": 6036, + "n_pred": 8268, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9172176468313807, + "FN": 1597, + "FP": 544, + "IoU": 0.8470932723896586, + "TN": 783038, + "TP": 11861, + "n_pred": 12405, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3939507094846901, + "FN": 3448, + "FP": 9536, + "IoU": 0.2452917926063706, + "TN": 779836, + "TP": 4220, + "n_pred": 13756, + "n_ref": 7668 + }, + "2": { + "Dice": 0.746945123305932, + "FN": 2898, + "FP": 1658, + "IoU": 0.5960992907801419, + "TN": 785760, + "TP": 6724, + "n_pred": 8382, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9121723937099593, + "FN": 1201, + "FP": 307, + "IoU": 0.83852660884463, + "TN": 787701, + "TP": 7831, + "n_pred": 8138, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8169107366252115, + "FN": 1367, + "FP": 3609, + "IoU": 0.6904895191889034, + "TN": 880593, + "TP": 11101, + "n_pred": 14710, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7991807475678443, + "FN": 2534, + "FP": 1388, + "IoU": 0.6655295923588607, + "TN": 884944, + "TP": 7804, + "n_pred": 9192, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9300215137883826, + "FN": 364, + "FP": 1425, + "IoU": 0.8691964612122541, + "TN": 882993, + "TP": 11888, + "n_pred": 13313, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6429174404862401, + "FN": 644, + "FP": 5701, + "IoU": 0.47374968897735753, + "TN": 884613, + "TP": 5712, + "n_pred": 11413, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8197996248684752, + "FN": 2558, + "FP": 1381, + "IoU": 0.6946274905031398, + "TN": 883771, + "TP": 8960, + "n_pred": 10341, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9082162999004755, + "FN": 613, + "FP": 1047, + "IoU": 0.8318646814544718, + "TN": 886797, + "TP": 8213, + "n_pred": 9260, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8873157324893812, + "FN": 566, + "FP": 2140, + "IoU": 0.7974550898203593, + "TN": 748688, + "TP": 10654, + "n_pred": 12794, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8645682335887347, + "FN": 2062, + "FP": 554, + "IoU": 0.7614444647091009, + "TN": 751082, + "TP": 8350, + "n_pred": 8904, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9622273151684917, + "FN": 416, + "FP": 474, + "IoU": 0.9272043186651399, + "TN": 749822, + "TP": 11336, + "n_pred": 11810, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6226921785834173, + "FN": 82, + "FP": 4414, + "IoU": 0.4521082135023154, + "TN": 753842, + "TP": 3710, + "n_pred": 8124, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8375988832014891, + "FN": 2632, + "FP": 858, + "IoU": 0.7205764611689351, + "TN": 749558, + "TP": 9000, + "n_pred": 9858, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9189149343948105, + "FN": 601, + "FP": 499, + "IoU": 0.8499931815082504, + "TN": 754715, + "TP": 6233, + "n_pred": 6732, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7877961307268778, + "FN": 144, + "FP": 4057, + "IoU": 0.6498874906242187, + "TN": 983329, + "TP": 7798, + "n_pred": 11855, + "n_ref": 7942 + }, + "2": { + "Dice": 0.793454223794781, + "FN": 1572, + "FP": 2164, + "IoU": 0.657624633431085, + "TN": 984416, + "TP": 7176, + "n_pred": 9340, + "n_ref": 8748 + }, + "3": { + "Dice": 0.962411742302171, + "FN": 121, + "FP": 1162, + "IoU": 0.9275468714705218, + "TN": 977620, + "TP": 16425, + "n_pred": 17587, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5353428521064693, + "FN": 205, + "FP": 5067, + "IoU": 0.36550728126128296, + "TN": 987019, + "TP": 3037, + "n_pred": 8104, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7925549541588424, + "FN": 1159, + "FP": 2597, + "IoU": 0.656390083249474, + "TN": 984397, + "TP": 7175, + "n_pred": 9772, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9064202589024974, + "FN": 216, + "FP": 1931, + "IoU": 0.8288561179752889, + "TN": 982783, + "TP": 10398, + "n_pred": 12329, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9137677609015189, + "FN": 1269, + "FP": 1195, + "IoU": 0.8412268831754623, + "TN": 742497, + "TP": 13055, + "n_pred": 14250, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8547078395890491, + "FN": 1491, + "FP": 998, + "IoU": 0.7462793068297655, + "TN": 748206, + "TP": 7321, + "n_pred": 8319, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9554232860874405, + "FN": 146, + "FP": 895, + "IoU": 0.9146511437238666, + "TN": 745819, + "TP": 11156, + "n_pred": 12051, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.565537376072015, + "FN": 587, + "FP": 6556, + "IoU": 0.39425033921302577, + "TN": 746224, + "TP": 4649, + "n_pred": 11205, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8492927094668118, + "FN": 1527, + "FP": 1243, + "IoU": 0.7380614657210401, + "TN": 747441, + "TP": 7805, + "n_pred": 9048, + "n_ref": 9332 + }, + "3": { + "Dice": 0.7974986972381448, + "FN": 366, + "FP": 1577, + "IoU": 0.6631998613277864, + "TN": 752247, + "TP": 3826, + "n_pred": 5403, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7001196331250831, + "FN": 2679, + "FP": 1833, + "IoU": 0.5386031291543103, + "TN": 629197, + "TP": 5267, + "n_pred": 7100, + "n_ref": 7946 + }, + "2": { + "Dice": 0.832603632976246, + "FN": 897, + "FP": 900, + "IoU": 0.7132141717203958, + "TN": 632710, + "TP": 4469, + "n_pred": 5369, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9488656567811677, + "FN": 663, + "FP": 56, + "IoU": 0.9027063599458728, + "TN": 631586, + "TP": 6671, + "n_pred": 6727, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.528256989886972, + "FN": 800, + "FP": 3165, + "IoU": 0.3589329021827001, + "TN": 632791, + "TP": 2220, + "n_pred": 5385, + "n_ref": 3020 + }, + "2": { + "Dice": 0.8449781659388647, + "FN": 1547, + "FP": 583, + "IoU": 0.7315689981096408, + "TN": 631041, + "TP": 5805, + "n_pred": 6388, + "n_ref": 7352 + }, + "3": { + "Dice": 0.873244710728328, + "FN": 424, + "FP": 253, + "IoU": 0.775008308408109, + "TN": 635967, + "TP": 2332, + "n_pred": 2585, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.71479137616647, + "FN": 2112, + "FP": 8524, + "IoU": 0.556167584710399, + "TN": 959076, + "TP": 13328, + "n_pred": 21852, + "n_ref": 15440 + }, + "2": { + "Dice": 0.7725900773438974, + "FN": 1705, + "FP": 3117, + "IoU": 0.6294474756013217, + "TN": 970027, + "TP": 8191, + "n_pred": 11308, + "n_ref": 9896 + }, + "3": { + "Dice": 0.953008408255378, + "FN": 127, + "FP": 1164, + "IoU": 0.9102350159922125, + "TN": 968658, + "TP": 13091, + "n_pred": 14255, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.44086578706102764, + "FN": 658, + "FP": 13369, + "IoU": 0.2827632049905405, + "TN": 963483, + "TP": 5530, + "n_pred": 18899, + "n_ref": 6188 + }, + "2": { + "Dice": 0.7664289632473944, + "FN": 2970, + "FP": 1288, + "IoU": 0.6213091426538598, + "TN": 971796, + "TP": 6986, + "n_pred": 8274, + "n_ref": 9956 + }, + "3": { + "Dice": 0.7258176318608608, + "FN": 231, + "FP": 4120, + "IoU": 0.5696340257171117, + "TN": 972930, + "TP": 5759, + "n_pred": 9879, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.84802874043792, + "FN": 2489, + "FP": 2418, + "IoU": 0.7361544252070115, + "TN": 1029978, + "TP": 13691, + "n_pred": 16109, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8457987072945522, + "FN": 1380, + "FP": 1292, + "IoU": 0.7328, + "TN": 1038576, + "TP": 7328, + "n_pred": 8620, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9582335511628851, + "FN": 456, + "FP": 573, + "IoU": 0.9198160991194576, + "TN": 1035743, + "TP": 11804, + "n_pred": 12377, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6069752242885152, + "FN": 322, + "FP": 6293, + "IoU": 0.43572464386249254, + "TN": 1036853, + "TP": 5108, + "n_pred": 11401, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8526058631921825, + "FN": 1946, + "FP": 950, + "IoU": 0.7430801987224982, + "TN": 1037304, + "TP": 8376, + "n_pred": 9326, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9247418586179508, + "FN": 423, + "FP": 335, + "IoU": 0.8600184672206833, + "TN": 1043161, + "TP": 4657, + "n_pred": 4992, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.678026386533769, + "FN": 2965, + "FP": 4820, + "IoU": 0.5128895006882743, + "TN": 473234, + "TP": 8197, + "n_pred": 13017, + "n_ref": 11162 + }, + "2": { + "Dice": 0.6564449991085755, + "FN": 876, + "FP": 1051, + "IoU": 0.488588110403397, + "TN": 485448, + "TP": 1841, + "n_pred": 2892, + "n_ref": 2717 + }, + "3": { + "Dice": 0.8906033630069239, + "FN": 149, + "FP": 957, + "IoU": 0.8027817403708987, + "TN": 483608, + "TP": 4502, + "n_pred": 5459, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6247584403774014, + "FN": 1155, + "FP": 5447, + "IoU": 0.45428996528351795, + "TN": 477118, + "TP": 5496, + "n_pred": 10943, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8377515170871926, + "FN": 737, + "FP": 279, + "IoU": 0.720802418246771, + "TN": 485577, + "TP": 2623, + "n_pred": 2902, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8121298270552002, + "FN": 76, + "FP": 717, + "IoU": 0.6836856800957319, + "TN": 486709, + "TP": 1714, + "n_pred": 2431, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8219647919364435, + "FN": 4133, + "FP": 954, + "IoU": 0.6977421271538918, + "TN": 463650, + "TP": 11743, + "n_pred": 12697, + "n_ref": 15876 + }, + "2": { + "Dice": 0.737492149884865, + "FN": 996, + "FP": 1512, + "IoU": 0.5841485657436578, + "TN": 474449, + "TP": 3523, + "n_pred": 5035, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9474885844748858, + "FN": 320, + "FP": 416, + "IoU": 0.9002169197396963, + "TN": 473104, + "TP": 6640, + "n_pred": 7056, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8203639179248935, + "FN": 3135, + "FP": 577, + "IoU": 0.6954381358713488, + "TN": 468292, + "TP": 8476, + "n_pred": 9053, + "n_ref": 11611 + }, + "2": { + "Dice": 0.7735959438377535, + "FN": 1695, + "FP": 627, + "IoU": 0.6307839084115122, + "TN": 474191, + "TP": 3967, + "n_pred": 4594, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8466276562981213, + "FN": 57, + "FP": 939, + "IoU": 0.734045393858478, + "TN": 476735, + "TP": 2749, + "n_pred": 3688, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7124257158292815, + "FN": 7485, + "FP": 3161, + "IoU": 0.5533084378802501, + "TN": 620807, + "TP": 13187, + "n_pred": 16348, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7212758245741211, + "FN": 3096, + "FP": 1518, + "IoU": 0.5640589569160998, + "TN": 634056, + "TP": 5970, + "n_pred": 7488, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9157971180674999, + "FN": 2018, + "FP": 185, + "IoU": 0.8446732003102305, + "TN": 630457, + "TP": 11980, + "n_pred": 12165, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6913152592697325, + "FN": 5553, + "FP": 3180, + "IoU": 0.528251944684529, + "TN": 626128, + "TP": 9779, + "n_pred": 12959, + "n_ref": 15332 + }, + "2": { + "Dice": 0.7940467753366407, + "FN": 3763, + "FP": 596, + "IoU": 0.658439116125999, + "TN": 631878, + "TP": 8403, + "n_pred": 8999, + "n_ref": 12166 + }, + "3": { + "Dice": 0.8943488943488943, + "FN": 828, + "FP": 763, + "IoU": 0.8088888888888889, + "TN": 636315, + "TP": 6734, + "n_pred": 7497, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7588370313695486, + "FN": 7175, + "FP": 2281, + "IoU": 0.6113919368758476, + "TN": 540147, + "TP": 14877, + "n_pred": 17158, + "n_ref": 22052 + }, + "2": { + "Dice": 0.697614718151674, + "FN": 1208, + "FP": 1619, + "IoU": 0.5356438896189225, + "TN": 558392, + "TP": 3261, + "n_pred": 4880, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9500813211560115, + "FN": 303, + "FP": 495, + "IoU": 0.9049094375595805, + "TN": 556088, + "TP": 7594, + "n_pred": 8089, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5795778149437237, + "FN": 2021, + "FP": 7280, + "IoU": 0.40803207739307534, + "TN": 548768, + "TP": 6411, + "n_pred": 13691, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8096238705610422, + "FN": 1010, + "FP": 802, + "IoU": 0.6801412180052957, + "TN": 558815, + "TP": 3853, + "n_pred": 4655, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8597368421052631, + "FN": 185, + "FP": 881, + "IoU": 0.7539810754673436, + "TN": 560147, + "TP": 3267, + "n_pred": 4148, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6507416081186573, + "FN": 3407, + "FP": 1067, + "IoU": 0.48229576486924325, + "TN": 410238, + "TP": 4168, + "n_pred": 5235, + "n_ref": 7575 + }, + "2": { + "Dice": 0.16213903743315508, + "FN": 2477, + "FP": 1440, + "IoU": 0.08822160148975791, + "TN": 414584, + "TP": 379, + "n_pred": 1819, + "n_ref": 2856 + }, + "3": { + "Dice": 0.566707633483545, + "FN": 2124, + "FP": 1049, + "IoU": 0.3953887195121951, + "TN": 413632, + "TP": 2075, + "n_pred": 3124, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6542994325621999, + "FN": 1739, + "FP": 1429, + "IoU": 0.48621472591631526, + "TN": 412714, + "TP": 2998, + "n_pred": 4427, + "n_ref": 4737 + }, + "2": { + "Dice": 0.1543074155506696, + "FN": 2607, + "FP": 1624, + "IoU": 0.08360407190816548, + "TN": 414263, + "TP": 386, + "n_pred": 2010, + "n_ref": 2993 + }, + "3": { + "Dice": 0.3567289117836446, + "FN": 1829, + "FP": 169, + "IoU": 0.2170846394984326, + "TN": 416328, + "TP": 554, + "n_pred": 723, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9053974340067836, + "FN": 1287, + "FP": 1279, + "IoU": 0.8271471876052543, + "TN": 481665, + "TP": 12279, + "n_pred": 13558, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8013734418153318, + "FN": 2304, + "FP": 357, + "IoU": 0.6685764105118944, + "TN": 488481, + "TP": 5368, + "n_pred": 5725, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9269530541961211, + "FN": 101, + "FP": 1108, + "IoU": 0.8638513513513514, + "TN": 487630, + "TP": 7671, + "n_pred": 8779, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.875827940616673, + "FN": 1758, + "FP": 1504, + "IoU": 0.7790870919680347, + "TN": 481744, + "TP": 11504, + "n_pred": 13008, + "n_ref": 13262 + }, + "2": { + "Dice": 0.7424319052091611, + "FN": 3338, + "FP": 227, + "IoU": 0.5903711363897507, + "TN": 487807, + "TP": 5138, + "n_pred": 5365, + "n_ref": 8476 + }, + "3": { + "Dice": 0.7849934702600023, + "FN": 94, + "FP": 1717, + "IoU": 0.6460816884893492, + "TN": 491393, + "TP": 3306, + "n_pred": 5023, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_001/summary_cross_val.json b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_001/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..5132f8220801c3658d61ebe3b43db861d1b31673 --- /dev/null +++ b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_001/summary_cross_val.json @@ -0,0 +1,3444 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.7070367585665359, + "FN": 25.203703703703706, + "FP": 19.203703703703706, + "IoU": 0.6055299722076927, + "TN": 974.0185185185186, + "TP": 48.24074074074074, + "n_pred": 67.44444444444444, + "n_ref": 73.44444444444444 + }, + "mean": { + "1": { + "Dice": 0.5353059498681982, + "FN": 52.833333333333336, + "FP": 20.666666666666668, + "IoU": 0.4149716815334796, + "TN": 937.2777777777778, + "TP": 55.888888888888886, + "n_pred": 76.55555555555556, + "n_ref": 108.72222222222223 + }, + "2": { + "Dice": 0.7961900693693281, + "FN": 13.444444444444445, + "FP": 28.055555555555557, + "IoU": 0.6808730534799305, + "TN": 956.7222222222222, + "TP": 68.44444444444444, + "n_pred": 96.5, + "n_ref": 81.88888888888889 + }, + "3": { + "Dice": 0.7896142564620815, + "FN": 9.333333333333334, + "FP": 8.88888888888889, + "IoU": 0.7207451816096677, + "TN": 1028.0555555555557, + "TP": 20.38888888888889, + "n_pred": 29.27777777777778, + "n_ref": 29.72222222222222 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.41134751773049644, + "FN": 166, + "FP": 0, + "IoU": 0.25892857142857145, + "TN": 1376, + "TP": 58, + "n_pred": 58, + "n_ref": 224 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4095744680851064, + "FN": 444, + "FP": 0, + "IoU": 0.25752508361204013, + "TN": 202, + "TP": 154, + "n_pred": 154, + "n_ref": 598 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3384615384615385, + "FN": 80, + "FP": 6, + "IoU": 0.2037037037037037, + "TN": 1492, + "TP": 22, + "n_pred": 28, + "n_ref": 102 + }, + "2": { + "Dice": 0.6367432150313153, + "FN": 0, + "FP": 348, + "IoU": 0.4670750382848392, + "TN": 947, + "TP": 305, + "n_pred": 653, + "n_ref": 305 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7891891891891892, + "FN": 39, + "FP": 0, + "IoU": 0.6517857142857143, + "TN": 688, + "TP": 73, + "n_pred": 73, + "n_ref": 112 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6993143976493633, + "FN": 165, + "FP": 142, + "IoU": 0.5376506024096386, + "TN": 136, + "TP": 357, + "n_pred": 499, + "n_ref": 522 + }, + "3": { + "Dice": 0.42357274401473294, + "FN": 163, + "FP": 150, + "IoU": 0.26869158878504673, + "TN": 372, + "TP": 115, + "n_pred": 265, + "n_ref": 278 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8125594671741199, + "FN": 197, + "FP": 0, + "IoU": 0.6842948717948718, + "TN": 976, + "TP": 427, + "n_pred": 427, + "n_ref": 624 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.09944751381215469, + "FN": 0, + "FP": 326, + "IoU": 0.05232558139534884, + "TN": 1256, + "TP": 18, + "n_pred": 344, + "n_ref": 18 + }, + "2": { + "Dice": 0.9193548387096774, + "FN": 34, + "FP": 6, + "IoU": 0.8507462686567164, + "TN": 1332, + "TP": 228, + "n_pred": 234, + "n_ref": 262 + }, + "3": { + "Dice": 0.967741935483871, + "FN": 3, + "FP": 8, + "IoU": 0.9375, + "TN": 1424, + "TP": 165, + "n_pred": 173, + "n_ref": 168 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8865619546247818, + "FN": 25, + "FP": 40, + "IoU": 0.7962382445141066, + "TN": 1281, + "TP": 254, + "n_pred": 294, + "n_ref": 279 + }, + "2": { + "Dice": 0.9293478260869565, + "FN": 43, + "FP": 9, + "IoU": 0.868020304568528, + "TN": 1206, + "TP": 342, + "n_pred": 351, + "n_ref": 385 + }, + "3": { + "Dice": 0.9775280898876404, + "FN": 2, + "FP": 2, + "IoU": 0.9560439560439561, + "TN": 1509, + "TP": 87, + "n_pred": 89, + "n_ref": 89 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.7292706577587903, + "FN": 21.925925925925924, + "FP": 12.5, + "IoU": 0.6384119693687946, + "TN": 1018.8148148148148, + "TP": 102.31481481481482, + "n_pred": 114.81481481481482, + "n_ref": 124.24074074074075 + }, + "mean": { + "1": { + "Dice": 0.5582410176722782, + "FN": 40.77777777777778, + "FP": 3.8333333333333335, + "IoU": 0.4599471077562092, + "TN": 1015.7777777777778, + "TP": 95.16666666666667, + "n_pred": 99.0, + "n_ref": 135.94444444444446 + }, + "2": { + "Dice": 0.7960077598006328, + "FN": 14.666666666666666, + "FP": 26.666666666666668, + "IoU": 0.6754543016706023, + "TN": 1021.5555555555555, + "TP": 92.66666666666667, + "n_pred": 119.33333333333333, + "n_ref": 107.33333333333333 + }, + "3": { + "Dice": 0.8335631958034598, + "FN": 10.333333333333334, + "FP": 7.0, + "IoU": 0.7798344986795724, + "TN": 1019.1111111111111, + "TP": 119.11111111111111, + "n_pred": 126.11111111111111, + "n_ref": 129.44444444444446 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6827309236947792, + "FN": 79, + "FP": 0, + "IoU": 0.5182926829268293, + "TN": 1436, + "TP": 85, + "n_pred": 85, + "n_ref": 164 + }, + "2": { + "Dice": 0.7170868347338936, + "FN": 22, + "FP": 79, + "IoU": 0.5589519650655022, + "TN": 1371, + "TP": 128, + "n_pred": 207, + "n_ref": 150 + }, + "3": { + "Dice": 0.8974789915966387, + "FN": 61, + "FP": 0, + "IoU": 0.8140243902439024, + "TN": 1272, + "TP": 267, + "n_pred": 267, + "n_ref": 328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4701195219123506, + "FN": 124, + "FP": 9, + "IoU": 0.3072916666666667, + "TN": 1408, + "TP": 59, + "n_pred": 68, + "n_ref": 183 + }, + "2": { + "Dice": 0.8491379310344828, + "FN": 31, + "FP": 39, + "IoU": 0.7378277153558053, + "TN": 1333, + "TP": 197, + "n_pred": 236, + "n_ref": 228 + }, + "3": { + "Dice": 0.9653092006033183, + "FN": 22, + "FP": 1, + "IoU": 0.9329446064139941, + "TN": 1257, + "TP": 320, + "n_pred": 321, + "n_ref": 342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 17, + "IoU": 0.0, + "TN": 1583, + "TP": 0, + "n_pred": 17, + "n_ref": 0 + }, + "2": { + "Dice": 0.9041095890410958, + "FN": 4, + "FP": 52, + "IoU": 0.825, + "TN": 1280, + "TP": 264, + "n_pred": 316, + "n_ref": 268 + }, + "3": { + "Dice": 0.9532428355957768, + "FN": 28, + "FP": 3, + "IoU": 0.9106628242074928, + "TN": 1253, + "TP": 316, + "n_pred": 319, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7202380952380952, + "FN": 185, + "FP": 3, + "IoU": 0.5627906976744186, + "TN": 1970, + "TP": 242, + "n_pred": 245, + "n_ref": 427 + }, + "2": { + "Dice": 0.8682926829268293, + "FN": 12, + "FP": 15, + "IoU": 0.7672413793103449, + "TN": 2284, + "TP": 89, + "n_pred": 104, + "n_ref": 101 + }, + "3": { + "Dice": 0.9333333333333333, + "FN": 1, + "FP": 0, + "IoU": 0.875, + "TN": 2392, + "TP": 7, + "n_pred": 7, + "n_ref": 8 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9486552567237164, + "FN": 14, + "FP": 7, + "IoU": 0.9023255813953488, + "TN": 585, + "TP": 194, + "n_pred": 201, + "n_ref": 208 + }, + "3": { + "Dice": 0.9891304347826086, + "FN": 1, + "FP": 9, + "IoU": 0.978494623655914, + "TN": 335, + "TP": 455, + "n_pred": 464, + "n_ref": 456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7122153209109731, + "FN": 88, + "FP": 51, + "IoU": 0.5530546623794212, + "TN": 489, + "TP": 172, + "n_pred": 223, + "n_ref": 260 + }, + "3": { + "Dice": 0.9097345132743363, + "FN": 51, + "FP": 0, + "IoU": 0.8344155844155844, + "TN": 492, + "TP": 257, + "n_pred": 257, + "n_ref": 308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 34, + "IoU": 0.0, + "TN": 766, + "TP": 0, + "n_pred": 34, + "n_ref": 0 + }, + "2": { + "Dice": 0.6819338422391857, + "FN": 68, + "FP": 57, + "IoU": 0.5173745173745173, + "TN": 541, + "TP": 134, + "n_pred": 191, + "n_ref": 202 + }, + "3": { + "Dice": 0.8027681660899654, + "FN": 0, + "FP": 57, + "IoU": 0.6705202312138728, + "TN": 627, + "TP": 116, + "n_pred": 173, + "n_ref": 116 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8553846153846154, + "FN": 188, + "FP": 0, + "IoU": 0.7473118279569892, + "TN": 56, + "TP": 556, + "n_pred": 556, + "n_ref": 744 + }, + "2": { + "Dice": 0.6495726495726496, + "FN": 0, + "FP": 41, + "IoU": 0.4810126582278481, + "TN": 721, + "TP": 38, + "n_pred": 79, + "n_ref": 38 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 33, + "IoU": 0.0, + "TN": 767, + "TP": 0, + "n_pred": 33, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9226401703335699, + "FN": 109, + "FP": 0, + "IoU": 0.8563899868247694, + "TN": 841, + "TP": 650, + "n_pred": 650, + "n_ref": 759 + }, + "2": { + "Dice": 0.9388971684053651, + "FN": 4, + "FP": 37, + "IoU": 0.8848314606741573, + "TN": 1244, + "TP": 315, + "n_pred": 352, + "n_ref": 319 + }, + "3": { + "Dice": 0.9310344827586207, + "FN": 14, + "FP": 2, + "IoU": 0.8709677419354839, + "TN": 1476, + "TP": 108, + "n_pred": 110, + "n_ref": 122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8148148148148148, + "FN": 49, + "FP": 6, + "IoU": 0.6875, + "TN": 624, + "TP": 121, + "n_pred": 127, + "n_ref": 170 + }, + "2": { + "Dice": 0.690176322418136, + "FN": 21, + "FP": 102, + "IoU": 0.5269230769230769, + "TN": 540, + "TP": 137, + "n_pred": 239, + "n_ref": 158 + }, + "3": { + "Dice": 0.9536, + "FN": 8, + "FP": 21, + "IoU": 0.9113149847094801, + "TN": 473, + "TP": 298, + "n_pred": 319, + "n_ref": 306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.5894066887427427, + "FN": 15.814814814814815, + "FP": 3.7037037037037037, + "IoU": 0.5106896684180477, + "TN": 1017.611111111111, + "TP": 29.537037037037038, + "n_pred": 33.24074074074074, + "n_ref": 45.351851851851855 + }, + "mean": { + "1": { + "Dice": 0.3381950534281724, + "FN": 8.666666666666666, + "FP": 7.333333333333333, + "IoU": 0.2739037863207298, + "TN": 1019.5, + "TP": 31.166666666666668, + "n_pred": 38.5, + "n_ref": 39.833333333333336 + }, + "2": { + "Dice": 0.6173611902088723, + "FN": 34.22222222222222, + "FP": 3.7222222222222223, + "IoU": 0.5254118217054263, + "TN": 1006.4444444444445, + "TP": 22.27777777777778, + "n_pred": 26.0, + "n_ref": 56.5 + }, + "3": { + "Dice": 0.8126638225911834, + "FN": 4.555555555555555, + "FP": 0.05555555555555555, + "IoU": 0.7327533972279872, + "TN": 1026.888888888889, + "TP": 35.166666666666664, + "n_pred": 35.22222222222222, + "n_ref": 39.72222222222222 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 35, + "IoU": 0.0, + "TN": 765, + "TP": 0, + "n_pred": 35, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5340909090909091, + "FN": 116, + "FP": 48, + "IoU": 0.3643410852713178, + "TN": 542, + "TP": 94, + "n_pred": 142, + "n_ref": 210 + }, + "2": { + "Dice": 0.8206388206388207, + "FN": 47, + "FP": 26, + "IoU": 0.6958333333333333, + "TN": 560, + "TP": 167, + "n_pred": 193, + "n_ref": 214 + }, + "3": { + "Dice": 0.9523809523809523, + "FN": 26, + "FP": 0, + "IoU": 0.9090909090909091, + "TN": 514, + "TP": 260, + "n_pred": 260, + "n_ref": 286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 526, + "FP": 0, + "IoU": 0.0, + "TN": 274, + "TP": 0, + "n_pred": 0, + "n_ref": 526 + }, + "3": { + "Dice": 0.4406779661016949, + "FN": 33, + "FP": 0, + "IoU": 0.2826086956521739, + "TN": 754, + "TP": 13, + "n_pred": 13, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5454545454545454, + "FN": 15, + "FP": 25, + "IoU": 0.375, + "TN": 1536, + "TP": 24, + "n_pred": 49, + "n_ref": 39 + }, + "2": { + "Dice": 0.8609271523178808, + "FN": 41, + "FP": 22, + "IoU": 0.7558139534883721, + "TN": 1342, + "TP": 195, + "n_pred": 217, + "n_ref": 236 + }, + "3": { + "Dice": 0.9687074829931973, + "FN": 22, + "FP": 1, + "IoU": 0.9393139841688655, + "TN": 1221, + "TP": 356, + "n_pred": 357, + "n_ref": 378 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 1599, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9496248660235799, + "FN": 25, + "FP": 22, + "IoU": 0.9040816326530612, + "TN": 310, + "TP": 443, + "n_pred": 465, + "n_ref": 468 + }, + "2": { + "Dice": 0.7878787878787878, + "FN": 2, + "FP": 19, + "IoU": 0.65, + "TN": 740, + "TP": 39, + "n_pred": 58, + "n_ref": 41 + }, + "3": { + "Dice": 0.8888888888888888, + "FN": 1, + "FP": 0, + "IoU": 0.8, + "TN": 795, + "TP": 4, + "n_pred": 4, + "n_ref": 5 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.5051329835423409, + "FN": 19.35294117647059, + "FP": 19.411764705882355, + "IoU": 0.4415045951137167, + "TN": 917.2352941176472, + "TP": 79.29411764705883, + "n_pred": 98.70588235294117, + "n_ref": 98.6470588235294 + }, + "mean": { + "1": { + "Dice": 0.07407407407407407, + "FN": 0.17647058823529413, + "FP": 26.294117647058822, + "IoU": 0.043478260869565216, + "TN": 1007.8823529411765, + "TP": 0.9411764705882353, + "n_pred": 27.235294117647058, + "n_ref": 1.1176470588235294 + }, + "2": { + "Dice": 0.6408964845198357, + "FN": 30.058823529411764, + "FP": 22.529411764705884, + "IoU": 0.5460118151254489, + "TN": 880.8235294117648, + "TP": 101.88235294117646, + "n_pred": 124.41176470588235, + "n_ref": 131.94117647058823 + }, + "3": { + "Dice": 0.8004283920331128, + "FN": 27.823529411764707, + "FP": 9.411764705882353, + "IoU": 0.735023709346136, + "TN": 863.0, + "TP": 135.05882352941177, + "n_pred": 144.47058823529412, + "n_ref": 162.88235294117646 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8076923076923077, + "FN": 20, + "FP": 0, + "IoU": 0.6774193548387096, + "TN": 2338, + "TP": 42, + "n_pred": 42, + "n_ref": 62 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 2398, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 3, + "FP": 0, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 0, + "n_ref": 3 + }, + "2": { + "Dice": 0.8028571428571428, + "FN": 85, + "FP": 53, + "IoU": 0.6706443914081146, + "TN": 381, + "TP": 281, + "n_pred": 334, + "n_ref": 366 + }, + "3": { + "Dice": 0.9198184568835098, + "FN": 40, + "FP": 13, + "IoU": 0.8515406162464986, + "TN": 443, + "TP": 304, + "n_pred": 317, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2962962962962963, + "FN": 0, + "FP": 76, + "IoU": 0.17391304347826086, + "TN": 2308, + "TP": 16, + "n_pred": 92, + "n_ref": 16 + }, + "2": { + "Dice": 0.8745644599303136, + "FN": 144, + "FP": 0, + "IoU": 0.7770897832817337, + "TN": 1754, + "TP": 502, + "n_pred": 502, + "n_ref": 646 + }, + "3": { + "Dice": 0.9517241379310345, + "FN": 0, + "FP": 14, + "IoU": 0.9078947368421053, + "TN": 2248, + "TP": 138, + "n_pred": 152, + "n_ref": 138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 100, + "FP": 0, + "IoU": 0.0, + "TN": 700, + "TP": 0, + "n_pred": 0, + "n_ref": 100 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9203539823008849, + "FN": 6, + "FP": 30, + "IoU": 0.8524590163934426, + "TN": 556, + "TP": 208, + "n_pred": 238, + "n_ref": 214 + }, + "3": { + "Dice": 0.9838709677419355, + "FN": 2, + "FP": 2, + "IoU": 0.9682539682539683, + "TN": 674, + "TP": 122, + "n_pred": 124, + "n_ref": 124 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8952095808383234, + "FN": 14, + "FP": 56, + "IoU": 0.8102981029810298, + "TN": 1231, + "TP": 299, + "n_pred": 355, + "n_ref": 313 + }, + "3": { + "Dice": 0.924892703862661, + "FN": 56, + "FP": 14, + "IoU": 0.8602794411177644, + "TN": 1099, + "TP": 431, + "n_pred": 445, + "n_ref": 487 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 122, + "IoU": 0.0, + "TN": 678, + "TP": 0, + "n_pred": 122, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.829971181556196, + "FN": 16, + "FP": 43, + "IoU": 0.7093596059113301, + "TN": 597, + "TP": 144, + "n_pred": 187, + "n_ref": 160 + }, + "3": { + "Dice": 0.9331259720062208, + "FN": 32, + "FP": 11, + "IoU": 0.8746355685131195, + "TN": 457, + "TP": 300, + "n_pred": 311, + "n_ref": 332 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5179856115107914, + "FN": 74, + "FP": 60, + "IoU": 0.34951456310679613, + "TN": 594, + "TP": 72, + "n_pred": 132, + "n_ref": 146 + }, + "3": { + "Dice": 0.8123249299719888, + "FN": 11, + "FP": 56, + "IoU": 0.6839622641509434, + "TN": 588, + "TP": 145, + "n_pred": 201, + "n_ref": 156 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7603305785123967, + "FN": 52, + "FP": 64, + "IoU": 0.6133333333333333, + "TN": 500, + "TP": 184, + "n_pred": 248, + "n_ref": 236 + }, + "3": { + "Dice": 0.9339853300733496, + "FN": 6, + "FP": 48, + "IoU": 0.8761467889908257, + "TN": 364, + "TP": 382, + "n_pred": 430, + "n_ref": 388 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 249, + "IoU": 0.0, + "TN": 551, + "TP": 0, + "n_pred": 249, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 77, + "IoU": 0.0, + "TN": 723, + "TP": 0, + "n_pred": 77, + "n_ref": 0 + }, + "3": { + "Dice": 0.7441130298273155, + "FN": 326, + "FP": 0, + "IoU": 0.5925, + "TN": 0, + "TP": 474, + "n_pred": 474, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient088_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.6946481024134986, + "FN": 12.333333333333334, + "FP": 10.80392156862745, + "IoU": 0.6075878913019265, + "TN": 1047.8431372549019, + "TP": 58.43137254901961, + "n_pred": 69.23529411764706, + "n_ref": 70.76470588235294 + }, + "mean": { + "1": { + "Dice": 0.44918712310016656, + "FN": 1.8823529411764706, + "FP": 17.176470588235293, + "IoU": 0.37441589058359465, + "TN": 1073.0588235294117, + "TP": 37.294117647058826, + "n_pred": 54.470588235294116, + "n_ref": 39.1764705882353 + }, + "2": { + "Dice": 0.753506272058119, + "FN": 22.88235294117647, + "FP": 10.235294117647058, + "IoU": 0.6454201615954691, + "TN": 1036.4117647058824, + "TP": 59.88235294117647, + "n_pred": 70.11764705882354, + "n_ref": 82.76470588235294 + }, + "3": { + "Dice": 0.8812509120822105, + "FN": 12.235294117647058, + "FP": 5.0, + "IoU": 0.8029276217267156, + "TN": 1034.0588235294117, + "TP": 78.11764705882354, + "n_pred": 83.11764705882354, + "n_ref": 90.3529411764706 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7466666666666667, + "FN": 38, + "FP": 0, + "IoU": 0.5957446808510638, + "TN": 1506, + "TP": 56, + "n_pred": 56, + "n_ref": 94 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.2708333333333333, + "FN": 162, + "FP": 118, + "IoU": 0.1566265060240964, + "TN": 1268, + "TP": 52, + "n_pred": 170, + "n_ref": 214 + }, + "3": { + "Dice": 0.6984667802385008, + "FN": 177, + "FP": 0, + "IoU": 0.5366492146596858, + "TN": 1218, + "TP": 205, + "n_pred": 205, + "n_ref": 382 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9082426127527217, + "FN": 36, + "FP": 23, + "IoU": 0.8319088319088319, + "TN": 449, + "TP": 292, + "n_pred": 315, + "n_ref": 328 + }, + "3": { + "Dice": 0.9383490073145245, + "FN": 23, + "FP": 36, + "IoU": 0.8838582677165354, + "TN": 292, + "TP": 449, + "n_pred": 485, + "n_ref": 472 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8829113924050633, + "FN": 65, + "FP": 9, + "IoU": 0.7903682719546742, + "TN": 447, + "TP": 279, + "n_pred": 288, + "n_ref": 344 + }, + "3": { + "Dice": 0.9144542772861357, + "FN": 7, + "FP": 22, + "IoU": 0.842391304347826, + "TN": 616, + "TP": 155, + "n_pred": 177, + "n_ref": 162 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.760914760914761, + "FN": 0, + "FP": 230, + "IoU": 0.6140939597315436, + "TN": 204, + "TP": 366, + "n_pred": 596, + "n_ref": 366 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8929765886287625, + "FN": 21, + "FP": 43, + "IoU": 0.8066465256797583, + "TN": 1269, + "TP": 267, + "n_pred": 310, + "n_ref": 288 + }, + "2": { + "Dice": 0.8390804597701149, + "FN": 39, + "FP": 17, + "IoU": 0.7227722772277227, + "TN": 1398, + "TP": 146, + "n_pred": 163, + "n_ref": 185 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.14285714285714285, + "FN": 11, + "FP": 1, + "IoU": 0.07692307692307693, + "TN": 787, + "TP": 1, + "n_pred": 2, + "n_ref": 12 + }, + "2": { + "Dice": 0.8733031674208145, + "FN": 49, + "FP": 7, + "IoU": 0.7751004016064257, + "TN": 551, + "TP": 193, + "n_pred": 200, + "n_ref": 242 + }, + "3": { + "Dice": 0.9737335834896811, + "FN": 1, + "FP": 27, + "IoU": 0.9488117001828154, + "TN": 253, + "TP": 519, + "n_pred": 546, + "n_ref": 520 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 18, + "IoU": 0.0, + "TN": 782, + "TP": 0, + "n_pred": 18, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861416/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient089_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.6450990382047816, + "FN": 18.92614379084967, + "FP": 13.124618736383443, + "IoU": 0.5607448192820357, + "TN": 995.1045751633986, + "TP": 63.563616557734214, + "n_pred": 76.68823529411765, + "n_ref": 82.48976034858387 + }, + "mean": { + "1": { + "Dice": 0.3910006436285779, + "FN": 20.867320261437907, + "FP": 15.060784313725488, + "IoU": 0.3133433454127157, + "TN": 1010.6993464052288, + "TP": 44.09150326797385, + "n_pred": 59.152287581699355, + "n_ref": 64.95882352941177 + }, + "2": { + "Dice": 0.7207923551913575, + "FN": 23.054901960784314, + "FP": 18.24183006535948, + "IoU": 0.6146342307153755, + "TN": 980.3915032679739, + "TP": 69.03071895424837, + "n_pred": 87.27254901960785, + "n_ref": 92.08562091503268 + }, + "3": { + "Dice": 0.8235041157944096, + "FN": 12.856209150326796, + "FP": 6.071241830065359, + "IoU": 0.7542568817180157, + "TN": 994.2228758169935, + "TP": 77.5686274509804, + "n_pred": 83.63986928104575, + "n_ref": 90.42483660130719 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_002/summary.json b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_002/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..50c6f8736c443b9b3e984e34a54b4c3d17d6d897 --- /dev/null +++ b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_002/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.782145312657955, + "FN": 2098.7466666666664, + "FP": 1671.033333333333, + "IoU": 0.6664371127371823, + "TN": 842563.4933333333, + "TP": 8095.366666666666, + "n_pred": 9766.4, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.6857267490894065, + "FN": 3045.58, + "FP": 2374.84, + "IoU": 0.5430202875898195, + "TN": 842199.74, + "TP": 6808.48, + "n_pred": 9183.32, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.7815489809789284, + "FN": 2119.72, + "FP": 1710.86, + "IoU": 0.6579358398585474, + "TN": 842662.28, + "TP": 7935.78, + "n_pred": 9646.64, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.87916020790553, + "FN": 1130.94, + "FP": 927.4, + "IoU": 0.7983552107631798, + "TN": 842828.46, + "TP": 9541.84, + "n_pred": 10469.24, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8362933005099349, + "FN": 1934, + "FP": 1790, + "IoU": 0.7186461166515563, + "TN": 1092684, + "TP": 9512, + "n_pred": 11302, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8308469439299545, + "FN": 1120, + "FP": 3903, + "IoU": 0.7106400138256812, + "TN": 1088561, + "TP": 12336, + "n_pred": 16239, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9272248124873302, + "FN": 1338, + "FP": 2252, + "IoU": 0.86432350718065, + "TN": 1079460, + "TP": 22870, + "n_pred": 25122, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7213088839709136, + "FN": 315, + "FP": 3211, + "IoU": 0.5640993942390902, + "TN": 1097831, + "TP": 4563, + "n_pred": 7774, + "n_ref": 4878 + }, + "2": { + "Dice": 0.848852002180893, + "FN": 1968, + "FP": 3022, + "IoU": 0.7373960635722555, + "TN": 1086918, + "TP": 14012, + "n_pred": 17034, + "n_ref": 15980 + }, + "3": { + "Dice": 0.8958031456648312, + "FN": 1481, + "FP": 2474, + "IoU": 0.8112712349685054, + "TN": 1084964, + "TP": 17001, + "n_pred": 19475, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.44660857679822313, + "FN": 4949, + "FP": 4768, + "IoU": 0.2875054993400792, + "TN": 895802, + "TP": 3921, + "n_pred": 8689, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8590295072070032, + "FN": 2403, + "FP": 1333, + "IoU": 0.7528937099014485, + "TN": 894321, + "TP": 11383, + "n_pred": 12716, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9074009469225018, + "FN": 3205, + "FP": 511, + "IoU": 0.8304976508689504, + "TN": 887517, + "TP": 18207, + "n_pred": 18718, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3435500168406871, + "FN": 4428, + "FP": 5317, + "IoU": 0.2074013826758845, + "TN": 897145, + "TP": 2550, + "n_pred": 7867, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8580512965449021, + "FN": 2180, + "FP": 1838, + "IoU": 0.7513921544363321, + "TN": 893278, + "TP": 12144, + "n_pred": 13982, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9327824921840108, + "FN": 1926, + "FP": 482, + "IoU": 0.8740322243147102, + "TN": 890324, + "TP": 16708, + "n_pred": 17190, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6711484000741074, + "FN": 11499, + "FP": 926, + "IoU": 0.5050589547482472, + "TN": 1400656, + "TP": 12679, + "n_pred": 13605, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8749028749028749, + "FN": 1572, + "FP": 2292, + "IoU": 0.7776243093922652, + "TN": 1408384, + "TP": 13512, + "n_pred": 15804, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9064902331442974, + "FN": 3697, + "FP": 755, + "IoU": 0.8289731474011756, + "TN": 1399729, + "TP": 21579, + "n_pred": 22334, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6932098157090766, + "FN": 6999, + "FP": 2340, + "IoU": 0.5304675716440422, + "TN": 1405870, + "TP": 10551, + "n_pred": 12891, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8682554814108675, + "FN": 1406, + "FP": 2740, + "IoU": 0.7671832884097035, + "TN": 1407952, + "TP": 13662, + "n_pred": 16402, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9219447851341032, + "FN": 2780, + "FP": 593, + "IoU": 0.8551925471171596, + "TN": 1402467, + "TP": 19920, + "n_pred": 20513, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6694453781512605, + "FN": 4279, + "FP": 638, + "IoU": 0.5031325788197252, + "TN": 752152, + "TP": 4979, + "n_pred": 5617, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8337874659400545, + "FN": 1607, + "FP": 1504, + "IoU": 0.7149532710280374, + "TN": 751134, + "TP": 7803, + "n_pred": 9307, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9578708375378405, + "FN": 828, + "FP": 508, + "IoU": 0.9191479060760106, + "TN": 745524, + "TP": 15188, + "n_pred": 15696, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7425986842105263, + "FN": 1306, + "FP": 1198, + "IoU": 0.5905820797907129, + "TN": 755932, + "TP": 3612, + "n_pred": 4810, + "n_ref": 4918 + }, + "2": { + "Dice": 0.7958075273939972, + "FN": 2886, + "FP": 1400, + "IoU": 0.6608640607691091, + "TN": 749410, + "TP": 8352, + "n_pred": 9752, + "n_ref": 11238 + }, + "3": { + "Dice": 0.930127396843341, + "FN": 1216, + "FP": 391, + "IoU": 0.8693814516784524, + "TN": 749745, + "TP": 10696, + "n_pred": 11087, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2499560349375696, + "FN": 11712, + "FP": 1083, + "IoU": 0.14282843170094459, + "TN": 1063345, + "TP": 2132, + "n_pred": 3215, + "n_ref": 13844 + }, + "2": { + "Dice": 0.6954871162150619, + "FN": 2542, + "FP": 3875, + "IoU": 0.5331393233903238, + "TN": 1064527, + "TP": 7328, + "n_pred": 11203, + "n_ref": 9870 + }, + "3": { + "Dice": 0.7857904774218574, + "FN": 6249, + "FP": 378, + "IoU": 0.6471621765520179, + "TN": 1059490, + "TP": 12155, + "n_pred": 12533, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.32594676984406146, + "FN": 10516, + "FP": 982, + "IoU": 0.19470514077601905, + "TN": 1063994, + "TP": 2780, + "n_pred": 3762, + "n_ref": 13296 + }, + "2": { + "Dice": 0.752670501232539, + "FN": 2556, + "FP": 2862, + "IoU": 0.6034255599472991, + "TN": 1064610, + "TP": 8244, + "n_pred": 11106, + "n_ref": 10800 + }, + "3": { + "Dice": 0.7775615340583858, + "FN": 5038, + "FP": 791, + "IoU": 0.6360741711931073, + "TN": 1062255, + "TP": 10188, + "n_pred": 10979, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6500268384326355, + "FN": 3077, + "FP": 3443, + "IoU": 0.4815109343936382, + "TN": 1093345, + "TP": 6055, + "n_pred": 9498, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8031305470388898, + "FN": 1528, + "FP": 3352, + "IoU": 0.6710260213024134, + "TN": 1091086, + "TP": 9954, + "n_pred": 13306, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8667862941126206, + "FN": 1352, + "FP": 1766, + "IoU": 0.7648921731262253, + "TN": 1092658, + "TP": 10144, + "n_pred": 11910, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.23656165827380254, + "FN": 2042, + "FP": 4477, + "IoU": 0.13414796121662903, + "TN": 1098391, + "TP": 1010, + "n_pred": 5487, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8286415138418409, + "FN": 1711, + "FP": 2690, + "IoU": 0.7074192261667331, + "TN": 1090878, + "TP": 10641, + "n_pred": 13331, + "n_ref": 12352 + }, + "3": { + "Dice": 0.6617283950617284, + "FN": 466, + "FP": 2411, + "IoU": 0.4944649446494465, + "TN": 1100229, + "TP": 2814, + "n_pred": 5225, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9042094053023934, + "FN": 1098, + "FP": 611, + "IoU": 0.8251662404092072, + "TN": 1137105, + "TP": 8066, + "n_pred": 8677, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8454084234826725, + "FN": 3669, + "FP": 2090, + "IoU": 0.7322142657862922, + "TN": 1125374, + "TP": 15747, + "n_pred": 17837, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9096970454640163, + "FN": 1015, + "FP": 1152, + "IoU": 0.8343525454823422, + "TN": 1133798, + "TP": 10915, + "n_pred": 12067, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4891330308096489, + "FN": 1442, + "FP": 697, + "IoU": 0.32374328169459377, + "TN": 1143717, + "TP": 1024, + "n_pred": 1721, + "n_ref": 2466 + }, + "2": { + "Dice": 0.630884928402184, + "FN": 12188, + "FP": 2144, + "IoU": 0.46079759217456734, + "TN": 1120300, + "TP": 12248, + "n_pred": 14392, + "n_ref": 24436 + }, + "3": { + "Dice": 0.48903615632004677, + "FN": 207, + "FP": 5036, + "IoU": 0.3236584107327141, + "TN": 1139128, + "TP": 2509, + "n_pred": 7545, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8768290583577207, + "FN": 1659, + "FP": 1203, + "IoU": 0.7806728484941374, + "TN": 787751, + "TP": 10187, + "n_pred": 11390, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8365596383447317, + "FN": 1417, + "FP": 1403, + "IoU": 0.7190395536514895, + "TN": 790763, + "TP": 7217, + "n_pred": 8620, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9349070100143062, + "FN": 811, + "FP": 281, + "IoU": 0.8777703156480859, + "TN": 791866, + "TP": 7842, + "n_pred": 8123, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6245438832341079, + "FN": 687, + "FP": 3223, + "IoU": 0.4540631108628875, + "TN": 793638, + "TP": 3252, + "n_pred": 6475, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8552716065236934, + "FN": 2662, + "FP": 719, + "IoU": 0.7471393313888266, + "TN": 787429, + "TP": 9990, + "n_pred": 10709, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8559857443706463, + "FN": 204, + "FP": 685, + "IoU": 0.7482299631832342, + "TN": 797269, + "TP": 2642, + "n_pred": 3327, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7273753831263107, + "FN": 5174, + "FP": 1586, + "IoU": 0.5715553302066169, + "TN": 1332062, + "TP": 9018, + "n_pred": 10604, + "n_ref": 14192 + }, + "2": { + "Dice": 0.853460972017673, + "FN": 1334, + "FP": 1850, + "IoU": 0.7443802183686576, + "TN": 1335384, + "TP": 9272, + "n_pred": 11122, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9685371204248931, + "FN": 551, + "FP": 539, + "IoU": 0.9389936754911289, + "TN": 1329973, + "TP": 16777, + "n_pred": 17316, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.714987885081343, + "FN": 704, + "FP": 3413, + "IoU": 0.556405559745717, + "TN": 1338559, + "TP": 5164, + "n_pred": 8577, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8569343657518141, + "FN": 1545, + "FP": 1984, + "IoU": 0.7496808057880551, + "TN": 1333742, + "TP": 10569, + "n_pred": 12553, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9464762068668789, + "FN": 619, + "FP": 625, + "IoU": 0.8983909172588418, + "TN": 1335597, + "TP": 10999, + "n_pred": 11624, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7154796939376104, + "FN": 3345, + "FP": 3906, + "IoU": 0.5570014662756598, + "TN": 835600, + "TP": 9117, + "n_pred": 13023, + "n_ref": 12462 + }, + "2": { + "Dice": 0.7292090335010168, + "FN": 2635, + "FP": 2425, + "IoU": 0.5738229596563632, + "TN": 840095, + "TP": 6813, + "n_pred": 9238, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9157443968633557, + "FN": 2022, + "FP": 1008, + "IoU": 0.8445835043085761, + "TN": 832472, + "TP": 16466, + "n_pred": 17474, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6601411046844213, + "FN": 1745, + "FP": 3602, + "IoU": 0.4926944971537002, + "TN": 841428, + "TP": 5193, + "n_pred": 8795, + "n_ref": 6938 + }, + "2": { + "Dice": 0.7854423916070932, + "FN": 2832, + "FP": 1790, + "IoU": 0.6466901085460939, + "TN": 838886, + "TP": 8460, + "n_pred": 10250, + "n_ref": 11292 + }, + "3": { + "Dice": 0.8986094340357574, + "FN": 1461, + "FP": 1142, + "IoU": 0.8158862639694441, + "TN": 837830, + "TP": 11535, + "n_pred": 12677, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6302820486712147, + "FN": 2761, + "FP": 870, + "IoU": 0.46015462384775496, + "TN": 845242, + "TP": 3095, + "n_pred": 3965, + "n_ref": 5856 + }, + "2": { + "Dice": 0.7242147154972284, + "FN": 3077, + "FP": 2744, + "IoU": 0.5676619132501486, + "TN": 838504, + "TP": 7643, + "n_pred": 10387, + "n_ref": 10720 + }, + "3": { + "Dice": 0.8701985606520419, + "FN": 2920, + "FP": 74, + "IoU": 0.7702225633154259, + "TN": 838938, + "TP": 10036, + "n_pred": 10110, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.60279212086441, + "FN": 528, + "FP": 1549, + "IoU": 0.4314262250205311, + "TN": 848315, + "TP": 1576, + "n_pred": 3125, + "n_ref": 2104 + }, + "2": { + "Dice": 0.7912849927232257, + "FN": 3343, + "FP": 1533, + "IoU": 0.6546497627310716, + "TN": 837849, + "TP": 9243, + "n_pred": 10776, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9117128080316398, + "FN": 1254, + "FP": 197, + "IoU": 0.8377501956837751, + "TN": 843025, + "TP": 7492, + "n_pred": 7689, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5086988039144618, + "FN": 7474, + "FP": 3370, + "IoU": 0.341110706039616, + "TN": 780582, + "TP": 5614, + "n_pred": 8984, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7619824819106686, + "FN": 1851, + "FP": 2524, + "IoU": 0.6154860256635613, + "TN": 785662, + "TP": 7003, + "n_pred": 9527, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9234354970283184, + "FN": 1572, + "FP": 399, + "IoU": 0.857761420220827, + "TN": 783183, + "TP": 11886, + "n_pred": 12285, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4883945219571787, + "FN": 3870, + "FP": 4087, + "IoU": 0.3230965546575925, + "TN": 785285, + "TP": 3798, + "n_pred": 7885, + "n_ref": 7668 + }, + "2": { + "Dice": 0.7946502057613168, + "FN": 1898, + "FP": 2094, + "IoU": 0.6592693752133834, + "TN": 785324, + "TP": 7724, + "n_pred": 9818, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9164348632359759, + "FN": 1125, + "FP": 317, + "IoU": 0.8457589046956894, + "TN": 787691, + "TP": 7907, + "n_pred": 8224, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7470907359092227, + "FN": 3448, + "FP": 2659, + "IoU": 0.5962847887882594, + "TN": 881543, + "TP": 9020, + "n_pred": 11679, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7438899157937975, + "FN": 3094, + "FP": 1894, + "IoU": 0.592217135382603, + "TN": 884438, + "TP": 7244, + "n_pred": 9138, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9042035815268614, + "FN": 260, + "FP": 2281, + "IoU": 0.8251565402876213, + "TN": 882137, + "TP": 11992, + "n_pred": 14273, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6779807900628295, + "FN": 1662, + "FP": 2797, + "IoU": 0.5128373210969082, + "TN": 887517, + "TP": 4694, + "n_pred": 7491, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8135255189919318, + "FN": 2544, + "FP": 1570, + "IoU": 0.6856662591687042, + "TN": 883582, + "TP": 8974, + "n_pred": 10544, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9016082742188769, + "FN": 501, + "FP": 1316, + "IoU": 0.8208440149871821, + "TN": 886528, + "TP": 8325, + "n_pred": 9641, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8964614551363062, + "FN": 1289, + "FP": 1005, + "IoU": 0.8123517382413088, + "TN": 749823, + "TP": 9931, + "n_pred": 10936, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8659772808313382, + "FN": 1912, + "FP": 719, + "IoU": 0.7636330967568054, + "TN": 750917, + "TP": 8500, + "n_pred": 9219, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9704806465333901, + "FN": 344, + "FP": 350, + "IoU": 0.9426541067592134, + "TN": 749946, + "TP": 11408, + "n_pred": 11758, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7167179487179487, + "FN": 298, + "FP": 2464, + "IoU": 0.5585038363171355, + "TN": 755792, + "TP": 3494, + "n_pred": 5958, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8578302315024966, + "FN": 2183, + "FP": 949, + "IoU": 0.7510531754232573, + "TN": 749467, + "TP": 9449, + "n_pred": 10398, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9342867896123448, + "FN": 628, + "FP": 245, + "IoU": 0.876677496821585, + "TN": 754969, + "TP": 6206, + "n_pred": 6451, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8441791044776119, + "FN": 165, + "FP": 2706, + "IoU": 0.7303719008264463, + "TN": 984680, + "TP": 7777, + "n_pred": 10483, + "n_ref": 7942 + }, + "2": { + "Dice": 0.7936748619083721, + "FN": 1420, + "FP": 2390, + "IoU": 0.657927814688454, + "TN": 984190, + "TP": 7328, + "n_pred": 9718, + "n_ref": 8748 + }, + "3": { + "Dice": 0.962756761508483, + "FN": 118, + "FP": 1153, + "IoU": 0.928188033222216, + "TN": 977629, + "TP": 16428, + "n_pred": 17581, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6873928448965596, + "FN": 235, + "FP": 2500, + "IoU": 0.523685127133403, + "TN": 989586, + "TP": 3007, + "n_pred": 5507, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7692716922913231, + "FN": 1104, + "FP": 3233, + "IoU": 0.6250540330249849, + "TN": 983761, + "TP": 7230, + "n_pred": 10463, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9042479108635098, + "FN": 226, + "FP": 1974, + "IoU": 0.8252303781379091, + "TN": 982740, + "TP": 10388, + "n_pred": 12362, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8765973393292111, + "FN": 2628, + "FP": 665, + "IoU": 0.7803055574087664, + "TN": 743027, + "TP": 11696, + "n_pred": 12361, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8460528568982247, + "FN": 1401, + "FP": 1296, + "IoU": 0.733181638306292, + "TN": 747908, + "TP": 7411, + "n_pred": 8707, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9602677795166058, + "FN": 257, + "FP": 657, + "IoU": 0.9235722050338657, + "TN": 746057, + "TP": 11045, + "n_pred": 11702, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6688074733615531, + "FN": 654, + "FP": 3884, + "IoU": 0.5024122807017544, + "TN": 748896, + "TP": 4582, + "n_pred": 8466, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8535825545171339, + "FN": 1249, + "FP": 1524, + "IoU": 0.7445652173913043, + "TN": 747160, + "TP": 8083, + "n_pred": 9607, + "n_ref": 9332 + }, + "3": { + "Dice": 0.7937948501477416, + "FN": 431, + "FP": 1523, + "IoU": 0.658092738407699, + "TN": 752301, + "TP": 3761, + "n_pred": 5284, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7928848906154161, + "FN": 2129, + "FP": 910, + "IoU": 0.6568428184281843, + "TN": 630120, + "TP": 5817, + "n_pred": 6727, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8761006848705861, + "FN": 441, + "FP": 952, + "IoU": 0.7795188350743907, + "TN": 632658, + "TP": 4925, + "n_pred": 5877, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9583391977480648, + "FN": 525, + "FP": 67, + "IoU": 0.9200108093500878, + "TN": 631575, + "TP": 6809, + "n_pred": 6876, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5991932526585992, + "FN": 569, + "FP": 2710, + "IoU": 0.42774869109947644, + "TN": 633246, + "TP": 2451, + "n_pred": 5161, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9067779221667465, + "FN": 723, + "FP": 640, + "IoU": 0.8294544544544544, + "TN": 630984, + "TP": 6629, + "n_pred": 7269, + "n_ref": 7352 + }, + "3": { + "Dice": 0.8794274178748395, + "FN": 360, + "FP": 297, + "IoU": 0.7848018342613823, + "TN": 635923, + "TP": 2396, + "n_pred": 2693, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8104465561145271, + "FN": 2391, + "FP": 3713, + "IoU": 0.6813031901007675, + "TN": 963887, + "TP": 13049, + "n_pred": 16762, + "n_ref": 15440 + }, + "2": { + "Dice": 0.7986189935679152, + "FN": 1453, + "FP": 2805, + "IoU": 0.6647508070230691, + "TN": 970339, + "TP": 8443, + "n_pred": 11248, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9577825784482443, + "FN": 139, + "FP": 1014, + "IoU": 0.9189853850477796, + "TN": 968808, + "TP": 13079, + "n_pred": 14093, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5979019058603834, + "FN": 745, + "FP": 6576, + "IoU": 0.4264337198370417, + "TN": 970276, + "TP": 5443, + "n_pred": 12019, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8414671735333402, + "FN": 1766, + "FP": 1320, + "IoU": 0.7263213905640298, + "TN": 971764, + "TP": 8190, + "n_pred": 9510, + "n_ref": 9956 + }, + "3": { + "Dice": 0.7900122799836267, + "FN": 200, + "FP": 2878, + "IoU": 0.6529093369418133, + "TN": 974172, + "TP": 5790, + "n_pred": 8668, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8464256591465072, + "FN": 3724, + "FP": 796, + "IoU": 0.7337417530631479, + "TN": 1031600, + "TP": 12456, + "n_pred": 13252, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8276018099547511, + "FN": 1392, + "FP": 1656, + "IoU": 0.7059050559629486, + "TN": 1038212, + "TP": 7316, + "n_pred": 8972, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9483817295884007, + "FN": 290, + "FP": 1013, + "IoU": 0.9018307842989528, + "TN": 1035303, + "TP": 11970, + "n_pred": 12983, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7530883261272391, + "FN": 553, + "FP": 2645, + "IoU": 0.6039628482972136, + "TN": 1040501, + "TP": 4877, + "n_pred": 7522, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8696385183715971, + "FN": 1553, + "FP": 1076, + "IoU": 0.7693454992103878, + "TN": 1037178, + "TP": 8769, + "n_pred": 9845, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9285643120454319, + "FN": 420, + "FP": 297, + "IoU": 0.8666542681792822, + "TN": 1043199, + "TP": 4660, + "n_pred": 4957, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7835070068271649, + "FN": 2440, + "FP": 2380, + "IoU": 0.6440702998080047, + "TN": 475674, + "TP": 8722, + "n_pred": 11102, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7449016100178891, + "FN": 635, + "FP": 791, + "IoU": 0.5935005701254276, + "TN": 485708, + "TP": 2082, + "n_pred": 2873, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9373171750940242, + "FN": 165, + "FP": 435, + "IoU": 0.8820290994887927, + "TN": 484130, + "TP": 4486, + "n_pred": 4921, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.730662067135465, + "FN": 1144, + "FP": 2916, + "IoU": 0.5756245426988607, + "TN": 479649, + "TP": 5507, + "n_pred": 8423, + "n_ref": 6651 + }, + "2": { + "Dice": 0.855775169857937, + "FN": 589, + "FP": 345, + "IoU": 0.7479082321187585, + "TN": 485511, + "TP": 2771, + "n_pred": 3116, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8347107438016529, + "FN": 73, + "FP": 607, + "IoU": 0.7163120567375887, + "TN": 486819, + "TP": 1717, + "n_pred": 2324, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.859467961430623, + "FN": 3308, + "FP": 802, + "IoU": 0.7535675740496462, + "TN": 463802, + "TP": 12568, + "n_pred": 13370, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7544232130219392, + "FN": 788, + "FP": 1641, + "IoU": 0.6056818181818182, + "TN": 474320, + "TP": 3731, + "n_pred": 5372, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9506243720396154, + "FN": 337, + "FP": 351, + "IoU": 0.9058952263712214, + "TN": 473169, + "TP": 6623, + "n_pred": 6974, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8609827407337546, + "FN": 2482, + "FP": 466, + "IoU": 0.7558996439513124, + "TN": 468403, + "TP": 9129, + "n_pred": 9595, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8045163142283035, + "FN": 1458, + "FP": 585, + "IoU": 0.6729630222506803, + "TN": 474233, + "TP": 4204, + "n_pred": 4789, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8744809964867455, + "FN": 68, + "FP": 718, + "IoU": 0.7769580022701476, + "TN": 476956, + "TP": 2738, + "n_pred": 3456, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7084330484330484, + "FN": 8239, + "FP": 1995, + "IoU": 0.5485066396082411, + "TN": 621973, + "TP": 12433, + "n_pred": 14428, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7170279369204418, + "FN": 2996, + "FP": 1795, + "IoU": 0.5588803977534297, + "TN": 633779, + "TP": 6070, + "n_pred": 7865, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9080013828602159, + "FN": 2179, + "FP": 216, + "IoU": 0.8315041508372027, + "TN": 630426, + "TP": 11819, + "n_pred": 12035, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7146059158552269, + "FN": 5608, + "FP": 2159, + "IoU": 0.5559430564290206, + "TN": 627149, + "TP": 9724, + "n_pred": 11883, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8070776784473574, + "FN": 3454, + "FP": 711, + "IoU": 0.6765550982371671, + "TN": 631763, + "TP": 8712, + "n_pred": 9423, + "n_ref": 12166 + }, + "3": { + "Dice": 0.8891422439809537, + "FN": 933, + "FP": 720, + "IoU": 0.8004105288577639, + "TN": 636358, + "TP": 6629, + "n_pred": 7349, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.815182006510802, + "FN": 5525, + "FP": 1969, + "IoU": 0.688022979892594, + "TN": 540459, + "TP": 16527, + "n_pred": 18496, + "n_ref": 22052 + }, + "2": { + "Dice": 0.722568578553616, + "FN": 992, + "FP": 1678, + "IoU": 0.56564177647633, + "TN": 558333, + "TP": 3477, + "n_pred": 5155, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9519667170953101, + "FN": 346, + "FP": 416, + "IoU": 0.9083363406712378, + "TN": 556167, + "TP": 7551, + "n_pred": 7967, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6049592695371945, + "FN": 1674, + "FP": 7152, + "IoU": 0.4336498973305955, + "TN": 548896, + "TP": 6758, + "n_pred": 13910, + "n_ref": 8432 + }, + "2": { + "Dice": 0.7917639566970919, + "FN": 1133, + "FP": 829, + "IoU": 0.6553056921995783, + "TN": 558788, + "TP": 3730, + "n_pred": 4559, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8537183328793244, + "FN": 318, + "FP": 756, + "IoU": 0.7447718631178707, + "TN": 560272, + "TP": 3134, + "n_pred": 3890, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7230780906124308, + "FN": 2811, + "FP": 838, + "IoU": 0.5662664923332937, + "TN": 410467, + "TP": 4764, + "n_pred": 5602, + "n_ref": 7575 + }, + "2": { + "Dice": 0.03975741239892183, + "FN": 2797, + "FP": 53, + "IoU": 0.020281883808869028, + "TN": 415971, + "TP": 59, + "n_pred": 112, + "n_ref": 2856 + }, + "3": { + "Dice": 0.35944700460829493, + "FN": 3224, + "FP": 251, + "IoU": 0.21910112359550563, + "TN": 414430, + "TP": 975, + "n_pred": 1226, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6449679685885513, + "FN": 1616, + "FP": 1820, + "IoU": 0.47597986884245846, + "TN": 412323, + "TP": 3121, + "n_pred": 4941, + "n_ref": 4737 + }, + "2": { + "Dice": 0.22247191011235956, + "FN": 2597, + "FP": 171, + "IoU": 0.12515802781289506, + "TN": 415716, + "TP": 396, + "n_pred": 567, + "n_ref": 2993 + }, + "3": { + "Dice": 0.7913082842915347, + "FN": 635, + "FP": 287, + "IoU": 0.6546816479400749, + "TN": 416210, + "TP": 1748, + "n_pred": 2035, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9031916502798366, + "FN": 1624, + "FP": 936, + "IoU": 0.823472624465591, + "TN": 482008, + "TP": 11942, + "n_pred": 12878, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8167554340002879, + "FN": 1998, + "FP": 548, + "IoU": 0.6902676399026764, + "TN": 488290, + "TP": 5674, + "n_pred": 6222, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9435618470668232, + "FN": 140, + "FP": 773, + "IoU": 0.8931538911644237, + "TN": 487965, + "TP": 7632, + "n_pred": 8405, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8926101484186806, + "FN": 1775, + "FP": 989, + "IoU": 0.8060486983369588, + "TN": 482259, + "TP": 11487, + "n_pred": 12476, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8216332861285319, + "FN": 2384, + "FP": 261, + "IoU": 0.697264507267941, + "TN": 487773, + "TP": 6092, + "n_pred": 6353, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8572909915748542, + "FN": 93, + "FP": 1008, + "IoU": 0.7502268602540835, + "TN": 492102, + "TP": 3307, + "n_pred": 4315, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_002/summary_cross_val.json b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_002/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..7690b2f2ac1153f5010a5b995c01ea1cc97013b9 --- /dev/null +++ b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_002/summary_cross_val.json @@ -0,0 +1,4164 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.6368472660099109, + "FN": 16.031746031746028, + "FP": 20.50793650793651, + "IoU": 0.5647072166357788, + "TN": 1274.4603174603174, + "TP": 98.52380952380952, + "n_pred": 119.03174603174602, + "n_ref": 114.55555555555556 + }, + "mean": { + "1": { + "Dice": 0.1805419026273158, + "FN": 7.095238095238095, + "FP": 37.333333333333336, + "IoU": 0.1302774180727595, + "TN": 1342.6190476190477, + "TP": 22.476190476190474, + "n_pred": 59.80952380952381, + "n_ref": 29.571428571428573 + }, + "2": { + "Dice": 0.8104445453537831, + "FN": 31.857142857142858, + "FP": 10.952380952380953, + "IoU": 0.6974033936752005, + "TN": 1256.095238095238, + "TP": 110.61904761904762, + "n_pred": 121.57142857142857, + "n_ref": 142.47619047619048 + }, + "3": { + "Dice": 0.919555350048634, + "FN": 9.142857142857142, + "FP": 13.238095238095237, + "IoU": 0.8664408381593766, + "TN": 1224.6666666666667, + "TP": 162.47619047619048, + "n_pred": 175.71428571428572, + "n_ref": 171.61904761904762 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6521739130434783, + "FN": 32, + "FP": 0, + "IoU": 0.4838709677419355, + "TN": 2338, + "TP": 30, + "n_pred": 30, + "n_ref": 62 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 70, + "IoU": 0.0, + "TN": 1530, + "TP": 0, + "n_pred": 70, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5283018867924528, + "FN": 116, + "FP": 59, + "IoU": 0.358974358974359, + "TN": 1327, + "TP": 98, + "n_pred": 157, + "n_ref": 214 + }, + "3": { + "Dice": 0.8562874251497006, + "FN": 96, + "FP": 0, + "IoU": 0.7486910994764397, + "TN": 1218, + "TP": 286, + "n_pred": 286, + "n_ref": 382 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5732484076433121, + "FN": 134, + "FP": 0, + "IoU": 0.4017857142857143, + "TN": 2176, + "TP": 90, + "n_pred": 90, + "n_ref": 224 + }, + "2": { + "Dice": 0.8900255754475703, + "FN": 26, + "FP": 17, + "IoU": 0.8018433179723502, + "TN": 2183, + "TP": 174, + "n_pred": 191, + "n_ref": 200 + }, + "3": { + "Dice": 0.9753610875106202, + "FN": 6, + "FP": 23, + "IoU": 0.9519071310116086, + "TN": 1797, + "TP": 574, + "n_pred": 597, + "n_ref": 580 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 23, + "IoU": 0.0, + "TN": 777, + "TP": 0, + "n_pred": 23, + "n_ref": 0 + }, + "2": { + "Dice": 0.8218694885361552, + "FN": 73, + "FP": 28, + "IoU": 0.6976047904191617, + "TN": 466, + "TP": 233, + "n_pred": 261, + "n_ref": 306 + }, + "3": { + "Dice": 0.9125, + "FN": 28, + "FP": 0, + "IoU": 0.8390804597701149, + "TN": 626, + "TP": 146, + "n_pred": 146, + "n_ref": 174 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 3, + "FP": 12, + "IoU": 0.0, + "TN": 1585, + "TP": 0, + "n_pred": 12, + "n_ref": 3 + }, + "2": { + "Dice": 0.875, + "FN": 30, + "FP": 66, + "IoU": 0.7777777777777778, + "TN": 1168, + "TP": 336, + "n_pred": 402, + "n_ref": 366 + }, + "3": { + "Dice": 0.9551820728291317, + "FN": 3, + "FP": 29, + "IoU": 0.9142091152815014, + "TN": 1227, + "TP": 341, + "n_pred": 370, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3137254901960784, + "FN": 0, + "FP": 70, + "IoU": 0.18604651162790697, + "TN": 3114, + "TP": 16, + "n_pred": 86, + "n_ref": 16 + }, + "2": { + "Dice": 0.9529983792544571, + "FN": 58, + "FP": 0, + "IoU": 0.9102167182662538, + "TN": 2554, + "TP": 588, + "n_pred": 588, + "n_ref": 646 + }, + "3": { + "Dice": 0.968421052631579, + "FN": 0, + "FP": 9, + "IoU": 0.9387755102040817, + "TN": 3053, + "TP": 138, + "n_pred": 147, + "n_ref": 138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7316538882803943, + "FN": 188, + "FP": 57, + "IoU": 0.5768566493955095, + "TN": 221, + "TP": 334, + "n_pred": 391, + "n_ref": 522 + }, + "3": { + "Dice": 0.6433770014556041, + "FN": 57, + "FP": 188, + "IoU": 0.4742489270386266, + "TN": 334, + "TP": 221, + "n_pred": 409, + "n_ref": 278 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7379032258064516, + "FN": 0, + "FP": 260, + "IoU": 0.5846645367412141, + "TN": 174, + "TP": 366, + "n_pred": 626, + "n_ref": 366 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 12, + "FP": 0, + "IoU": 0.0, + "TN": 788, + "TP": 0, + "n_pred": 0, + "n_ref": 12 + }, + "2": { + "Dice": 0.8954545454545455, + "FN": 45, + "FP": 1, + "IoU": 0.8106995884773662, + "TN": 557, + "TP": 197, + "n_pred": 198, + "n_ref": 242 + }, + "3": { + "Dice": 0.9876543209876543, + "FN": 0, + "FP": 13, + "IoU": 0.975609756097561, + "TN": 267, + "TP": 520, + "n_pred": 533, + "n_ref": 520 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9057471264367816, + "FN": 39, + "FP": 2, + "IoU": 0.8277310924369747, + "TN": 562, + "TP": 197, + "n_pred": 199, + "n_ref": 236 + }, + "3": { + "Dice": 0.9772151898734177, + "FN": 2, + "FP": 16, + "IoU": 0.9554455445544554, + "TN": 396, + "TP": 386, + "n_pred": 402, + "n_ref": 388 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 0, + "TP": 800, + "n_pred": 800, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 84, + "IoU": 0.0, + "TN": 2316, + "TP": 0, + "n_pred": 84, + "n_ref": 0 + }, + "2": { + "Dice": 0.8737864077669902, + "FN": 13, + "FP": 0, + "IoU": 0.7758620689655172, + "TN": 2342, + "TP": 45, + "n_pred": 45, + "n_ref": 58 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient099_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 265, + "IoU": 0.0, + "TN": 535, + "TP": 0, + "n_pred": 265, + "n_ref": 0 + }, + "2": { + "Dice": 0.7878787878787878, + "FN": 49, + "FP": 0, + "IoU": 0.65, + "TN": 660, + "TP": 91, + "n_pred": 91, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.755500591776583, + "FN": 26.28571428571429, + "FP": 11.936507936507937, + "IoU": 0.6866186186902311, + "TN": 1131.6031746031747, + "TP": 125.41269841269842, + "n_pred": 137.34920634920636, + "n_ref": 151.69841269841268 + }, + "mean": { + "1": { + "Dice": 0.5934955200479793, + "FN": 49.95238095238095, + "FP": 11.619047619047619, + "IoU": 0.5383512775905244, + "TN": 1131.7142857142858, + "TP": 101.95238095238095, + "n_pred": 113.57142857142857, + "n_ref": 151.9047619047619 + }, + "2": { + "Dice": 0.778780661760893, + "FN": 21.428571428571427, + "FP": 11.047619047619047, + "IoU": 0.6951374860595411, + "TN": 1137.2857142857142, + "TP": 125.47619047619048, + "n_pred": 136.52380952380952, + "n_ref": 146.9047619047619 + }, + "3": { + "Dice": 0.8942255935208769, + "FN": 7.476190476190476, + "FP": 13.142857142857142, + "IoU": 0.8263670924206279, + "TN": 1125.8095238095239, + "TP": 148.8095238095238, + "n_pred": 161.95238095238096, + "n_ref": 156.28571428571428 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 17, + "IoU": 0.0, + "TN": 3183, + "TP": 0, + "n_pred": 17, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 0, + "TP": 800, + "n_pred": 800, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 598, + "FP": 0, + "IoU": 0.0, + "TN": 202, + "TP": 0, + "n_pred": 0, + "n_ref": 598 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9647779479326187, + "FN": 23, + "FP": 0, + "IoU": 0.9319526627218935, + "TN": 2062, + "TP": 315, + "n_pred": 315, + "n_ref": 338 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 170, + "IoU": 0.0, + "TN": 1430, + "TP": 0, + "n_pred": 170, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9040247678018576, + "FN": 36, + "FP": 26, + "IoU": 0.8248587570621468, + "TN": 446, + "TP": 292, + "n_pred": 318, + "n_ref": 328 + }, + "3": { + "Dice": 0.9350104821802935, + "FN": 26, + "FP": 36, + "IoU": 0.8779527559055118, + "TN": 292, + "TP": 446, + "n_pred": 482, + "n_ref": 472 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8825396825396825, + "FN": 66, + "FP": 8, + "IoU": 0.7897727272727273, + "TN": 448, + "TP": 278, + "n_pred": 286, + "n_ref": 344 + }, + "3": { + "Dice": 0.9418960244648318, + "FN": 8, + "FP": 11, + "IoU": 0.8901734104046243, + "TN": 627, + "TP": 154, + "n_pred": 165, + "n_ref": 162 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 10, + "FP": 0, + "IoU": 0.0, + "TN": 790, + "TP": 0, + "n_pred": 0, + "n_ref": 10 + }, + "2": { + "Dice": 0.9769291964996022, + "FN": 28, + "FP": 1, + "IoU": 0.9548989113530326, + "TN": 157, + "TP": 614, + "n_pred": 615, + "n_ref": 642 + }, + "3": { + "Dice": 0.9368770764119602, + "FN": 1, + "FP": 18, + "IoU": 0.88125, + "TN": 640, + "TP": 141, + "n_pred": 159, + "n_ref": 142 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8398950131233596, + "FN": 50, + "FP": 11, + "IoU": 0.7239819004524887, + "TN": 579, + "TP": 160, + "n_pred": 171, + "n_ref": 210 + }, + "2": { + "Dice": 0.9099099099099099, + "FN": 12, + "FP": 28, + "IoU": 0.8347107438016529, + "TN": 558, + "TP": 202, + "n_pred": 230, + "n_ref": 214 + }, + "3": { + "Dice": 0.9562043795620438, + "FN": 24, + "FP": 0, + "IoU": 0.916083916083916, + "TN": 514, + "TP": 262, + "n_pred": 262, + "n_ref": 286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9459459459459459, + "FN": 64, + "FP": 0, + "IoU": 0.8974358974358975, + "TN": 1776, + "TP": 560, + "n_pred": 560, + "n_ref": 624 + }, + "2": { + "Dice": 0.8926417370325693, + "FN": 26, + "FP": 63, + "IoU": 0.8061002178649237, + "TN": 1941, + "TP": 370, + "n_pred": 433, + "n_ref": 396 + }, + "3": { + "Dice": 0.908029197080292, + "FN": 63, + "FP": 0, + "IoU": 0.8315508021390374, + "TN": 2026, + "TP": 311, + "n_pred": 311, + "n_ref": 374 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9167974882260597, + "FN": 21, + "FP": 32, + "IoU": 0.8463768115942029, + "TN": 1255, + "TP": 292, + "n_pred": 324, + "n_ref": 313 + }, + "3": { + "Dice": 0.944963655244029, + "FN": 32, + "FP": 21, + "IoU": 0.8956692913385826, + "TN": 1092, + "TP": 455, + "n_pred": 476, + "n_ref": 487 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8352059925093633, + "FN": 65, + "FP": 23, + "IoU": 0.7170418006430869, + "TN": 2089, + "TP": 223, + "n_pred": 246, + "n_ref": 288 + }, + "2": { + "Dice": 0.6211180124223602, + "FN": 231, + "FP": 13, + "IoU": 0.45045045045045046, + "TN": 1956, + "TP": 200, + "n_pred": 213, + "n_ref": 431 + }, + "3": { + "Dice": 0.8536209553158706, + "FN": 0, + "FP": 190, + "IoU": 0.7446236559139785, + "TN": 1656, + "TP": 554, + "n_pred": 744, + "n_ref": 554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9561586638830898, + "FN": 19, + "FP": 2, + "IoU": 0.916, + "TN": 550, + "TP": 229, + "n_pred": 231, + "n_ref": 248 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9480249480249481, + "FN": 12, + "FP": 38, + "IoU": 0.9011857707509882, + "TN": 294, + "TP": 456, + "n_pred": 494, + "n_ref": 468 + }, + "2": { + "Dice": 0.8192771084337349, + "FN": 7, + "FP": 8, + "IoU": 0.6938775510204082, + "TN": 751, + "TP": 34, + "n_pred": 42, + "n_ref": 41 + }, + "3": { + "Dice": 0.5714285714285714, + "FN": 3, + "FP": 0, + "IoU": 0.4, + "TN": 795, + "TP": 2, + "n_pred": 2, + "n_ref": 5 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8162291169451074, + "FN": 231, + "FP": 0, + "IoU": 0.6895161290322581, + "TN": 56, + "TP": 513, + "n_pred": 513, + "n_ref": 744 + }, + "2": { + "Dice": 0.6785714285714286, + "FN": 0, + "FP": 36, + "IoU": 0.5135135135135135, + "TN": 726, + "TP": 38, + "n_pred": 74, + "n_ref": 38 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient096_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.5869806250220959, + "FN": 20.848484848484848, + "FP": 24.24242424242424, + "IoU": 0.5027471965544253, + "TN": 1389.757575757576, + "TP": 56.06060606060606, + "n_pred": 80.3030303030303, + "n_ref": 76.90909090909092 + }, + "mean": { + "1": { + "Dice": 0.29759881628862445, + "FN": 13.909090909090908, + "FP": 27.681818181818183, + "IoU": 0.22424037499364524, + "TN": 1419.409090909091, + "TP": 29.90909090909091, + "n_pred": 57.59090909090909, + "n_ref": 43.81818181818182 + }, + "2": { + "Dice": 0.5711244712015976, + "FN": 45.45454545454545, + "FP": 35.81818181818182, + "IoU": 0.4708556691573893, + "TN": 1335.9545454545455, + "TP": 73.68181818181819, + "n_pred": 109.5, + "n_ref": 119.13636363636364 + }, + "3": { + "Dice": 0.8922185875760658, + "FN": 3.1818181818181817, + "FP": 9.227272727272727, + "IoU": 0.8131455455122415, + "TN": 1413.909090909091, + "TP": 64.5909090909091, + "n_pred": 73.81818181818181, + "n_ref": 67.77272727272727 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 181, + "IoU": 0.0, + "TN": 1419, + "TP": 0, + "n_pred": 181, + "n_ref": 0 + }, + "2": { + "Dice": 0.4528301886792453, + "FN": 74, + "FP": 13, + "IoU": 0.2926829268292683, + "TN": 1477, + "TP": 36, + "n_pred": 49, + "n_ref": 110 + }, + "3": { + "Dice": 0.9454545454545454, + "FN": 24, + "FP": 15, + "IoU": 0.896551724137931, + "TN": 1223, + "TP": 338, + "n_pred": 353, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42953020134228187, + "FN": 70, + "FP": 15, + "IoU": 0.27350427350427353, + "TN": 1483, + "TP": 32, + "n_pred": 47, + "n_ref": 102 + }, + "2": { + "Dice": 0.7270560190703218, + "FN": 0, + "FP": 229, + "IoU": 0.5711610486891385, + "TN": 1066, + "TP": 305, + "n_pred": 534, + "n_ref": 305 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9333333333333333, + "FN": 2, + "FP": 12, + "IoU": 0.875, + "TN": 1488, + "TP": 98, + "n_pred": 110, + "n_ref": 100 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 20, + "IoU": 0.0, + "TN": 780, + "TP": 0, + "n_pred": 20, + "n_ref": 0 + }, + "2": { + "Dice": 0.8893805309734514, + "FN": 13, + "FP": 37, + "IoU": 0.8007968127490039, + "TN": 549, + "TP": 201, + "n_pred": 238, + "n_ref": 214 + }, + "3": { + "Dice": 0.9457364341085271, + "FN": 2, + "FP": 12, + "IoU": 0.8970588235294118, + "TN": 664, + "TP": 122, + "n_pred": 134, + "n_ref": 124 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 526, + "FP": 0, + "IoU": 0.0, + "TN": 274, + "TP": 0, + "n_pred": 0, + "n_ref": 526 + }, + "3": { + "Dice": 0.8275862068965517, + "FN": 10, + "FP": 5, + "IoU": 0.7058823529411765, + "TN": 749, + "TP": 36, + "n_pred": 41, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6, + "FN": 72, + "FP": 0, + "IoU": 0.42857142857142855, + "TN": 674, + "TP": 54, + "n_pred": 54, + "n_ref": 126 + }, + "3": { + "Dice": 0.9302325581395349, + "FN": 0, + "FP": 3, + "IoU": 0.8695652173913043, + "TN": 777, + "TP": 20, + "n_pred": 23, + "n_ref": 20 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8174807197943444, + "FN": 109, + "FP": 33, + "IoU": 0.691304347826087, + "TN": 1940, + "TP": 318, + "n_pred": 351, + "n_ref": 427 + }, + "2": { + "Dice": 0.6666666666666666, + "FN": 48, + "FP": 5, + "IoU": 0.5, + "TN": 2294, + "TP": 53, + "n_pred": 58, + "n_ref": 101 + }, + "3": { + "Dice": 0.8571428571428571, + "FN": 2, + "FP": 0, + "IoU": 0.75, + "TN": 2392, + "TP": 6, + "n_pred": 6, + "n_ref": 8 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.36619718309859156, + "FN": 26, + "FP": 19, + "IoU": 0.22413793103448276, + "TN": 2342, + "TP": 13, + "n_pred": 32, + "n_ref": 39 + }, + "2": { + "Dice": 0.8691796008869179, + "FN": 40, + "FP": 19, + "IoU": 0.7686274509803922, + "TN": 2145, + "TP": 196, + "n_pred": 215, + "n_ref": 236 + }, + "3": { + "Dice": 0.9747003994673769, + "FN": 12, + "FP": 7, + "IoU": 0.9506493506493506, + "TN": 2015, + "TP": 366, + "n_pred": 373, + "n_ref": 378 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.141643059490085, + "FN": 121, + "FP": 182, + "IoU": 0.07621951219512195, + "TN": 472, + "TP": 25, + "n_pred": 207, + "n_ref": 146 + }, + "3": { + "Dice": 0.7205542725173211, + "FN": 0, + "FP": 121, + "IoU": 0.5631768953068592, + "TN": 523, + "TP": 156, + "n_pred": 277, + "n_ref": 156 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 18, + "FP": 78, + "IoU": 0.0, + "TN": 2304, + "TP": 0, + "n_pred": 78, + "n_ref": 18 + }, + "2": { + "Dice": 0.6531914893617021, + "FN": 65, + "FP": 261, + "IoU": 0.4849921011058452, + "TN": 1767, + "TP": 307, + "n_pred": 568, + "n_ref": 372 + }, + "3": { + "Dice": 0.9341500765696784, + "FN": 3, + "FP": 40, + "IoU": 0.8764367816091954, + "TN": 2052, + "TP": 305, + "n_pred": 345, + "n_ref": 308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.788, + "FN": 82, + "FP": 24, + "IoU": 0.6501650165016502, + "TN": 1297, + "TP": 197, + "n_pred": 221, + "n_ref": 279 + }, + "2": { + "Dice": 0.9202127659574468, + "FN": 39, + "FP": 21, + "IoU": 0.8522167487684729, + "TN": 1194, + "TP": 346, + "n_pred": 367, + "n_ref": 385 + }, + "3": { + "Dice": 0.8944099378881988, + "FN": 17, + "FP": 0, + "IoU": 0.8089887640449438, + "TN": 1511, + "TP": 72, + "n_pred": 72, + "n_ref": 89 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5747800586510264, + "FN": 1, + "FP": 144, + "IoU": 0.40329218106995884, + "TN": 2957, + "TP": 98, + "n_pred": 242, + "n_ref": 99 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 3199, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 9, + "IoU": 0.0, + "TN": 3191, + "TP": 0, + "n_pred": 9, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 94, + "IoU": 0.0, + "TN": 706, + "TP": 0, + "n_pred": 94, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.5868288544537346, + "FN": 14.469696969696969, + "FP": 11.545454545454547, + "IoU": 0.5095948117975021, + "TN": 1012.7575757575756, + "TP": 52.13636363636363, + "n_pred": 63.68181818181818, + "n_ref": 66.60606060606061 + }, + "mean": { + "1": { + "Dice": 0.3511498554987823, + "FN": 21.954545454545453, + "FP": 5.7727272727272725, + "IoU": 0.2873275845998454, + "TN": 1023.5, + "TP": 39.68181818181818, + "n_pred": 45.45454545454545, + "n_ref": 61.63636363636363 + }, + "2": { + "Dice": 0.6208278542743151, + "FN": 15.5, + "FP": 19.181818181818183, + "IoU": 0.5073756755939806, + "TN": 1005.0909090909091, + "TP": 51.13636363636363, + "n_pred": 70.31818181818181, + "n_ref": 66.63636363636364 + }, + "3": { + "Dice": 0.7885088535881063, + "FN": 5.954545454545454, + "FP": 9.681818181818182, + "IoU": 0.7340811751986804, + "TN": 1009.6818181818181, + "TP": 65.5909090909091, + "n_pred": 75.27272727272727, + "n_ref": 71.54545454545455 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7467532467532467, + "FN": 61, + "FP": 17, + "IoU": 0.5958549222797928, + "TN": 607, + "TP": 115, + "n_pred": 132, + "n_ref": 176 + }, + "3": { + "Dice": 0.9551451187335093, + "FN": 17, + "FP": 0, + "IoU": 0.9141414141414141, + "TN": 602, + "TP": 181, + "n_pred": 181, + "n_ref": 198 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 154, + "FP": 0, + "IoU": 0.0, + "TN": 1446, + "TP": 0, + "n_pred": 0, + "n_ref": 154 + }, + "2": { + "Dice": 0.8831168831168831, + "FN": 24, + "FP": 39, + "IoU": 0.7906976744186046, + "TN": 1299, + "TP": 238, + "n_pred": 277, + "n_ref": 262 + }, + "3": { + "Dice": 0.9422066549912435, + "FN": 13, + "FP": 20, + "IoU": 0.890728476821192, + "TN": 1298, + "TP": 269, + "n_pred": 289, + "n_ref": 282 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.460093896713615, + "FN": 115, + "FP": 0, + "IoU": 0.29878048780487804, + "TN": 1436, + "TP": 49, + "n_pred": 49, + "n_ref": 164 + }, + "2": { + "Dice": 0.7018469656992085, + "FN": 17, + "FP": 96, + "IoU": 0.540650406504065, + "TN": 1354, + "TP": 133, + "n_pred": 229, + "n_ref": 150 + }, + "3": { + "Dice": 0.8556521739130435, + "FN": 82, + "FP": 1, + "IoU": 0.7477203647416414, + "TN": 1271, + "TP": 246, + "n_pred": 247, + "n_ref": 328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.15165876777251186, + "FN": 162, + "FP": 17, + "IoU": 0.08205128205128205, + "TN": 1405, + "TP": 16, + "n_pred": 33, + "n_ref": 178 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 122, + "IoU": 0.0, + "TN": 1478, + "TP": 0, + "n_pred": 122, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.889261744966443, + "FN": 3, + "FP": 63, + "IoU": 0.8006042296072508, + "TN": 1269, + "TP": 265, + "n_pred": 328, + "n_ref": 268 + }, + "3": { + "Dice": 0.9748892171344166, + "FN": 14, + "FP": 3, + "IoU": 0.9510086455331412, + "TN": 1253, + "TP": 330, + "n_pred": 333, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5732484076433121, + "FN": 67, + "FP": 0, + "IoU": 0.4017857142857143, + "TN": 688, + "TP": 45, + "n_pred": 45, + "n_ref": 112 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 34, + "IoU": 0.0, + "TN": 766, + "TP": 0, + "n_pred": 34, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient075_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient075_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 17, + "IoU": 0.0, + "TN": 783, + "TP": 0, + "n_pred": 17, + "n_ref": 0 + }, + "2": { + "Dice": 0.7126436781609196, + "FN": 47, + "FP": 78, + "IoU": 0.5535714285714286, + "TN": 520, + "TP": 155, + "n_pred": 233, + "n_ref": 202 + }, + "3": { + "Dice": 0.8315412186379928, + "FN": 0, + "FP": 47, + "IoU": 0.7116564417177914, + "TN": 637, + "TP": 116, + "n_pred": 163, + "n_ref": 116 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 51, + "IoU": 0.0, + "TN": 1549, + "TP": 0, + "n_pred": 51, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 2, + "FP": 0, + "IoU": 0.0, + "TN": 1598, + "TP": 0, + "n_pred": 0, + "n_ref": 2 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9079320113314447, + "FN": 115, + "FP": 15, + "IoU": 0.8313878080415046, + "TN": 2429, + "TP": 641, + "n_pred": 656, + "n_ref": 756 + }, + "2": { + "Dice": 0.7602339181286549, + "FN": 5, + "FP": 36, + "IoU": 0.6132075471698113, + "TN": 3094, + "TP": 65, + "n_pred": 101, + "n_ref": 70 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8679245283018868, + "FN": 32, + "FP": 10, + "IoU": 0.7666666666666667, + "TN": 620, + "TP": 138, + "n_pred": 148, + "n_ref": 170 + }, + "2": { + "Dice": 0.7419354838709677, + "FN": 20, + "FP": 76, + "IoU": 0.5897435897435898, + "TN": 566, + "TP": 138, + "n_pred": 214, + "n_ref": 158 + }, + "3": { + "Dice": 0.960127591706539, + "FN": 5, + "FP": 20, + "IoU": 0.9233128834355828, + "TN": 474, + "TP": 301, + "n_pred": 321, + "n_ref": 306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient097_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.5634071505185408, + "FN": 17.893939393939394, + "FP": 23.090909090909093, + "IoU": 0.499548416116188, + "TN": 1278.2878787878788, + "TP": 62.54545454545454, + "n_pred": 85.63636363636364, + "n_ref": 80.43939393939394 + }, + "mean": { + "1": { + "Dice": 0.200561814810666, + "FN": 13.909090909090908, + "FP": 40.90909090909091, + "IoU": 0.16913193048787703, + "TN": 1286.6363636363637, + "TP": 40.36363636363637, + "n_pred": 81.27272727272727, + "n_ref": 54.27272727272727 + }, + "2": { + "Dice": 0.678662224674233, + "FN": 34.86363636363637, + "FP": 13.636363636363637, + "IoU": 0.5669694641538433, + "TN": 1259.0454545454545, + "TP": 74.27272727272727, + "n_pred": 87.9090909090909, + "n_ref": 109.13636363636364 + }, + "3": { + "Dice": 0.8109974120707236, + "FN": 4.909090909090909, + "FP": 14.727272727272727, + "IoU": 0.7625438537068436, + "TN": 1289.1818181818182, + "TP": 73.0, + "n_pred": 87.72727272727273, + "n_ref": 77.9090909090909 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.4602510460251046, + "FN": 128, + "FP": 1, + "IoU": 0.29891304347826086, + "TN": 1416, + "TP": 55, + "n_pred": 56, + "n_ref": 183 + }, + "2": { + "Dice": 0.8903225806451613, + "FN": 21, + "FP": 30, + "IoU": 0.8023255813953488, + "TN": 1342, + "TP": 207, + "n_pred": 237, + "n_ref": 228 + }, + "3": { + "Dice": 0.9838472834067548, + "FN": 7, + "FP": 4, + "IoU": 0.9682080924855492, + "TN": 1254, + "TP": 335, + "n_pred": 339, + "n_ref": 342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 483, + "IoU": 0.0, + "TN": 317, + "TP": 0, + "n_pred": 483, + "n_ref": 0 + }, + "2": { + "Dice": 0.6944444444444444, + "FN": 4, + "FP": 40, + "IoU": 0.5319148936170213, + "TN": 706, + "TP": 50, + "n_pred": 90, + "n_ref": 54 + }, + "3": { + "Dice": 0.9403973509933775, + "FN": 7, + "FP": 2, + "IoU": 0.8875, + "TN": 720, + "TP": 71, + "n_pred": 73, + "n_ref": 78 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.39316239316239315, + "FN": 71, + "FP": 0, + "IoU": 0.24468085106382978, + "TN": 1506, + "TP": 23, + "n_pred": 23, + "n_ref": 94 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 42, + "IoU": 0.0, + "TN": 758, + "TP": 0, + "n_pred": 42, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8879310344827587, + "FN": 52, + "FP": 0, + "IoU": 0.7984496124031008, + "TN": 1342, + "TP": 206, + "n_pred": 206, + "n_ref": 258 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 4000, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 4000, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 4000, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 55, + "IoU": 0.0, + "TN": 745, + "TP": 0, + "n_pred": 55, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 37, + "IoU": 0.0, + "TN": 763, + "TP": 0, + "n_pred": 37, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 87, + "IoU": 0.0, + "TN": 713, + "TP": 0, + "n_pred": 87, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 268, + "IoU": 0.0, + "TN": 532, + "TP": 0, + "n_pred": 268, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 1598, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.824468085106383, + "FN": 5, + "FP": 61, + "IoU": 0.7013574660633484, + "TN": 1379, + "TP": 155, + "n_pred": 216, + "n_ref": 160 + }, + "3": { + "Dice": 0.9694189602446484, + "FN": 15, + "FP": 5, + "IoU": 0.9406528189910979, + "TN": 1263, + "TP": 317, + "n_pred": 322, + "n_ref": 332 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8064516129032258, + "FN": 72, + "FP": 0, + "IoU": 0.6756756756756757, + "TN": 1378, + "TP": 150, + "n_pred": 150, + "n_ref": 222 + }, + "2": { + "Dice": 0.8310991957104558, + "FN": 53, + "FP": 10, + "IoU": 0.7110091743119266, + "TN": 1382, + "TP": 155, + "n_pred": 165, + "n_ref": 208 + }, + "3": { + "Dice": 0.9878183831672204, + "FN": 10, + "FP": 1, + "IoU": 0.975929978118162, + "TN": 1143, + "TP": 446, + "n_pred": 447, + "n_ref": 456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7024793388429752, + "FN": 90, + "FP": 54, + "IoU": 0.5414012738853503, + "TN": 486, + "TP": 170, + "n_pred": 224, + "n_ref": 260 + }, + "3": { + "Dice": 0.9039145907473309, + "FN": 54, + "FP": 0, + "IoU": 0.8246753246753247, + "TN": 492, + "TP": 254, + "n_pred": 254, + "n_ref": 308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 30, + "FP": 2, + "IoU": 0.0, + "TN": 2368, + "TP": 0, + "n_pred": 2, + "n_ref": 30 + }, + "2": { + "Dice": 0.6232247284878863, + "FN": 447, + "FP": 4, + "IoU": 0.4526699029126214, + "TN": 1576, + "TP": 373, + "n_pred": 377, + "n_ref": 820 + }, + "3": { + "Dice": 0.7619047619047619, + "FN": 4, + "FP": 41, + "IoU": 0.6153846153846154, + "TN": 2283, + "TP": 72, + "n_pred": 113, + "n_ref": 76 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 238, + "IoU": 0.0, + "TN": 1362, + "TP": 0, + "n_pred": 238, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 2372, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9394773039889959, + "FN": 76, + "FP": 12, + "IoU": 0.8858625162127107, + "TN": 829, + "TP": 683, + "n_pred": 695, + "n_ref": 759 + }, + "2": { + "Dice": 0.9394904458598726, + "FN": 24, + "FP": 14, + "IoU": 0.8858858858858859, + "TN": 1267, + "TP": 295, + "n_pred": 309, + "n_ref": 319 + }, + "3": { + "Dice": 0.940677966101695, + "FN": 11, + "FP": 3, + "IoU": 0.888, + "TN": 1475, + "TP": 111, + "n_pred": 114, + "n_ref": 122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2862850/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.6259128975561731, + "FN": 19.105916305916303, + "FP": 18.264646464646464, + "IoU": 0.552643251958825, + "TN": 1217.3733044733046, + "TP": 78.93578643578644, + "n_pred": 97.2004329004329, + "n_ref": 98.04170274170275 + }, + "mean": { + "1": { + "Dice": 0.3246695818546736, + "FN": 21.364069264069265, + "FP": 24.663203463203462, + "IoU": 0.2698657171489304, + "TN": 1240.7757575757576, + "TP": 46.87662337662338, + "n_pred": 71.53982683982683, + "n_ref": 68.24069264069263 + }, + "2": { + "Dice": 0.6919679514529643, + "FN": 29.820779220779222, + "FP": 18.12727272727273, + "IoU": 0.587548337727991, + "TN": 1198.6943722943724, + "TP": 87.03722943722944, + "n_pred": 105.16450216450217, + "n_ref": 116.85800865800866 + }, + "3": { + "Dice": 0.8611011593608813, + "FN": 6.132900432900433, + "FP": 12.003463203463202, + "IoU": 0.800515700999554, + "TN": 1212.6497835497835, + "TP": 102.8935064935065, + "n_pred": 114.8969696969697, + "n_ref": 109.02640692640693 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_003/summary.json b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_003/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..b2182f3fe1aef99539516fe4b4578303931fcd23 --- /dev/null +++ b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_003/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8373510666142147, + "FN": 1553.2866666666669, + "FP": 1242.4, + "IoU": 0.7333776648369081, + "TN": 842992.1266666666, + "TP": 8640.826666666666, + "n_pred": 9883.226666666667, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.7813716697670064, + "FN": 2243.34, + "FP": 1337.16, + "IoU": 0.6538061063176712, + "TN": 843237.42, + "TP": 7610.72, + "n_pred": 8947.88, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8200708189116008, + "FN": 1729.72, + "FP": 1605.66, + "IoU": 0.7024406732110872, + "TN": 842767.48, + "TP": 8325.78, + "n_pred": 9931.44, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9106107111640367, + "FN": 686.8, + "FP": 784.38, + "IoU": 0.8438862149819661, + "TN": 842971.48, + "TP": 9985.98, + "n_pred": 10770.36, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8572296476306197, + "FN": 1569, + "FP": 1721, + "IoU": 0.7501329080276449, + "TN": 1092753, + "TP": 9877, + "n_pred": 11598, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8377229080932784, + "FN": 1242, + "FP": 3490, + "IoU": 0.7207600613714151, + "TN": 1088974, + "TP": 12214, + "n_pred": 15704, + "n_ref": 13456 + }, + "3": { + "Dice": 0.93765485566948, + "FN": 934, + "FP": 2161, + "IoU": 0.8826273275437067, + "TN": 1079551, + "TP": 23274, + "n_pred": 25435, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7562862669245648, + "FN": 186, + "FP": 2838, + "IoU": 0.6080870917573873, + "TN": 1098204, + "TP": 4692, + "n_pred": 7530, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8527189860772929, + "FN": 2322, + "FP": 2396, + "IoU": 0.7432520679146714, + "TN": 1087544, + "TP": 13658, + "n_pred": 16054, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9170168889817014, + "FN": 917, + "FP": 2262, + "IoU": 0.8467508677207868, + "TN": 1085176, + "TP": 17565, + "n_pred": 19827, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7771376194840907, + "FN": 2935, + "FP": 469, + "IoU": 0.6355070135988864, + "TN": 900101, + "TP": 5935, + "n_pred": 6404, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8790694161190422, + "FN": 2148, + "FP": 1054, + "IoU": 0.7842318059299191, + "TN": 894600, + "TP": 11638, + "n_pred": 12692, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9680075276405552, + "FN": 837, + "FP": 523, + "IoU": 0.9379986323227718, + "TN": 887505, + "TP": 20575, + "n_pred": 21098, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7246854663774404, + "FN": 2802, + "FP": 371, + "IoU": 0.5682405769492448, + "TN": 902091, + "TP": 4176, + "n_pred": 4547, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8739210414603085, + "FN": 1972, + "FP": 1592, + "IoU": 0.7760743905503895, + "TN": 893524, + "TP": 12352, + "n_pred": 13944, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9633067361450361, + "FN": 887, + "FP": 465, + "IoU": 0.9292109534530604, + "TN": 890341, + "TP": 17747, + "n_pred": 18212, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8647011215169383, + "FN": 5481, + "FP": 370, + "IoU": 0.7616506436369561, + "TN": 1401212, + "TP": 18697, + "n_pred": 19067, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8737518984069538, + "FN": 1564, + "FP": 2343, + "IoU": 0.7758076547885465, + "TN": 1408333, + "TP": 13520, + "n_pred": 15863, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9704121030651643, + "FN": 645, + "FP": 857, + "IoU": 0.9425247771017488, + "TN": 1399627, + "TP": 24631, + "n_pred": 25488, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8689230769230769, + "FN": 2724, + "FP": 1749, + "IoU": 0.7682263329706203, + "TN": 1406461, + "TP": 14826, + "n_pred": 16575, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8686727463378984, + "FN": 1399, + "FP": 2734, + "IoU": 0.7678350747107067, + "TN": 1407958, + "TP": 13669, + "n_pred": 16403, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9632917572906032, + "FN": 998, + "FP": 656, + "IoU": 0.9291830792943997, + "TN": 1402404, + "TP": 21702, + "n_pred": 22358, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7852853801908856, + "FN": 3046, + "FP": 351, + "IoU": 0.6464772609012385, + "TN": 752439, + "TP": 6212, + "n_pred": 6563, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8534124629080119, + "FN": 1501, + "FP": 1216, + "IoU": 0.7443064182194618, + "TN": 751422, + "TP": 7909, + "n_pred": 9125, + "n_ref": 9410 + }, + "3": { + "Dice": 0.961404608872864, + "FN": 684, + "FP": 547, + "IoU": 0.9256777153897241, + "TN": 745485, + "TP": 15332, + "n_pred": 15879, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7866153517211888, + "FN": 1239, + "FP": 757, + "IoU": 0.6482819383259912, + "TN": 756373, + "TP": 3679, + "n_pred": 4436, + "n_ref": 4918 + }, + "2": { + "Dice": 0.791849589616339, + "FN": 2941, + "FP": 1421, + "IoU": 0.655423019195829, + "TN": 749389, + "TP": 8297, + "n_pred": 9718, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9188863548345454, + "FN": 1235, + "FP": 650, + "IoU": 0.84994427638911, + "TN": 749486, + "TP": 10677, + "n_pred": 11327, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6135125852509691, + "FN": 7592, + "FP": 285, + "IoU": 0.4424941609455729, + "TN": 1064143, + "TP": 6252, + "n_pred": 6537, + "n_ref": 13844 + }, + "2": { + "Dice": 0.7495044152099477, + "FN": 1552, + "FP": 4008, + "IoU": 0.5993659028678484, + "TN": 1064394, + "TP": 8318, + "n_pred": 12326, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9131899455817569, + "FN": 2546, + "FP": 469, + "IoU": 0.8402479732951836, + "TN": 1059399, + "TP": 15858, + "n_pred": 16327, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6302784810126583, + "FN": 7072, + "FP": 230, + "IoU": 0.460150820641727, + "TN": 1064746, + "TP": 6224, + "n_pred": 6454, + "n_ref": 13296 + }, + "2": { + "Dice": 0.7653867509503267, + "FN": 1840, + "FP": 3653, + "IoU": 0.6199404967826749, + "TN": 1063819, + "TP": 8960, + "n_pred": 12613, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9157303370786517, + "FN": 1697, + "FP": 793, + "IoU": 0.844559585492228, + "TN": 1062253, + "TP": 13529, + "n_pred": 14322, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8174997114163685, + "FN": 2050, + "FP": 1112, + "IoU": 0.6913315111284655, + "TN": 1095676, + "TP": 7082, + "n_pred": 8194, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8129742962056303, + "FN": 1519, + "FP": 3065, + "IoU": 0.68488348113013, + "TN": 1091373, + "TP": 9963, + "n_pred": 13028, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8729529391484226, + "FN": 1368, + "FP": 1580, + "IoU": 0.7745487916794127, + "TN": 1092844, + "TP": 10128, + "n_pred": 11708, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6705054382597568, + "FN": 1480, + "FP": 65, + "IoU": 0.5043310875842156, + "TN": 1102803, + "TP": 1572, + "n_pred": 1637, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8370845481049562, + "FN": 1585, + "FP": 2606, + "IoU": 0.7198154833533895, + "TN": 1090962, + "TP": 10767, + "n_pred": 13373, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7731776842676802, + "FN": 432, + "FP": 1239, + "IoU": 0.6302279265324187, + "TN": 1101401, + "TP": 2848, + "n_pred": 4087, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8958075755872766, + "FN": 1194, + "FP": 660, + "IoU": 0.8112785016286646, + "TN": 1137056, + "TP": 7970, + "n_pred": 8630, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8859102570815226, + "FN": 2496, + "FP": 1862, + "IoU": 0.7951875176238369, + "TN": 1125602, + "TP": 16920, + "n_pred": 18782, + "n_ref": 19416 + }, + "3": { + "Dice": 0.939077866235259, + "FN": 901, + "FP": 530, + "IoU": 0.8851524879614767, + "TN": 1134420, + "TP": 11029, + "n_pred": 11559, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6543863688694451, + "FN": 1045, + "FP": 456, + "IoU": 0.4863107460643395, + "TN": 1143958, + "TP": 1421, + "n_pred": 1877, + "n_ref": 2466 + }, + "2": { + "Dice": 0.7379950258274345, + "FN": 9006, + "FP": 1950, + "IoU": 0.5847798074736603, + "TN": 1120494, + "TP": 15430, + "n_pred": 17380, + "n_ref": 24436 + }, + "3": { + "Dice": 0.49500047614512904, + "FN": 117, + "FP": 5186, + "IoU": 0.3289040749177423, + "TN": 1138978, + "TP": 2599, + "n_pred": 7785, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9104901117798796, + "FN": 1257, + "FP": 825, + "IoU": 0.8356877910188619, + "TN": 788129, + "TP": 10589, + "n_pred": 11414, + "n_ref": 11846 + }, + "2": { + "Dice": 0.858245813227363, + "FN": 1075, + "FP": 1422, + "IoU": 0.7516905330151153, + "TN": 790744, + "TP": 7559, + "n_pred": 8981, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9432480666270078, + "FN": 725, + "FP": 229, + "IoU": 0.8925917586129251, + "TN": 791918, + "TP": 7928, + "n_pred": 8157, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6462465966549981, + "FN": 616, + "FP": 3022, + "IoU": 0.4773739405257865, + "TN": 793839, + "TP": 3323, + "n_pred": 6345, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8723458252262922, + "FN": 2340, + "FP": 678, + "IoU": 0.7735933983495874, + "TN": 787470, + "TP": 10312, + "n_pred": 10990, + "n_ref": 12652 + }, + "3": { + "Dice": 0.858097359210945, + "FN": 149, + "FP": 743, + "IoU": 0.7514628030091948, + "TN": 797211, + "TP": 2697, + "n_pred": 3440, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8923538016912264, + "FN": 1687, + "FP": 1330, + "IoU": 0.8056307176910192, + "TN": 1332318, + "TP": 12505, + "n_pred": 13835, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8670854156159736, + "FN": 1150, + "FP": 1749, + "IoU": 0.765358154593282, + "TN": 1335485, + "TP": 9456, + "n_pred": 11205, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9699161122360428, + "FN": 563, + "FP": 477, + "IoU": 0.9415894411682112, + "TN": 1330035, + "TP": 16765, + "n_pred": 17242, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6951383293043245, + "FN": 692, + "FP": 3848, + "IoU": 0.5327295183202965, + "TN": 1338124, + "TP": 5176, + "n_pred": 9024, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8783334684283051, + "FN": 1278, + "FP": 1724, + "IoU": 0.7830611360023124, + "TN": 1334002, + "TP": 10836, + "n_pred": 12560, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9523727499784687, + "FN": 560, + "FP": 546, + "IoU": 0.9090759618546531, + "TN": 1335676, + "TP": 11058, + "n_pred": 11604, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7762423282518314, + "FN": 2660, + "FP": 2991, + "IoU": 0.6343104898725167, + "TN": 836515, + "TP": 9802, + "n_pred": 12793, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8299613899613899, + "FN": 1387, + "FP": 1916, + "IoU": 0.7093453009503696, + "TN": 840604, + "TP": 8061, + "n_pred": 9977, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9639676668036717, + "FN": 898, + "FP": 417, + "IoU": 0.9304416820946839, + "TN": 833063, + "TP": 17590, + "n_pred": 18007, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7622626838592627, + "FN": 1056, + "FP": 2613, + "IoU": 0.6158517432729557, + "TN": 842417, + "TP": 5882, + "n_pred": 8495, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8324743443557583, + "FN": 2166, + "FP": 1507, + "IoU": 0.7130244550355497, + "TN": 839169, + "TP": 9126, + "n_pred": 10633, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9414592540900985, + "FN": 854, + "FP": 656, + "IoU": 0.8893934954585409, + "TN": 838316, + "TP": 12142, + "n_pred": 12798, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8232417098699012, + "FN": 1648, + "FP": 159, + "IoU": 0.6995843724023275, + "TN": 845953, + "TP": 4208, + "n_pred": 4367, + "n_ref": 5856 + }, + "2": { + "Dice": 0.797338792221085, + "FN": 2151, + "FP": 2205, + "IoU": 0.6629787234042553, + "TN": 839043, + "TP": 8569, + "n_pred": 10774, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9002028054757478, + "FN": 2303, + "FP": 59, + "IoU": 0.8185170956588552, + "TN": 838953, + "TP": 10653, + "n_pred": 10712, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.748868778280543, + "FN": 449, + "FP": 661, + "IoU": 0.5985533453887885, + "TN": 849203, + "TP": 1655, + "n_pred": 2316, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8367304055473839, + "FN": 2631, + "FP": 1254, + "IoU": 0.7192919075144508, + "TN": 838128, + "TP": 9955, + "n_pred": 11209, + "n_ref": 12586 + }, + "3": { + "Dice": 0.935043442283823, + "FN": 836, + "FP": 263, + "IoU": 0.878010878010878, + "TN": 842959, + "TP": 7910, + "n_pred": 8173, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6787189211967973, + "FN": 5035, + "FP": 2589, + "IoU": 0.5136824647572877, + "TN": 781363, + "TP": 8053, + "n_pred": 10642, + "n_ref": 13088 + }, + "2": { + "Dice": 0.782890197951494, + "FN": 1478, + "FP": 2613, + "IoU": 0.6432371152001395, + "TN": 785573, + "TP": 7376, + "n_pred": 9989, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9261739709395684, + "FN": 1634, + "FP": 251, + "IoU": 0.86249908819024, + "TN": 783331, + "TP": 11824, + "n_pred": 12075, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6572464213307121, + "FN": 2319, + "FP": 3260, + "IoU": 0.4894765739385066, + "TN": 786112, + "TP": 5349, + "n_pred": 8609, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8223932397766712, + "FN": 1447, + "FP": 2084, + "IoU": 0.6983598154792414, + "TN": 785334, + "TP": 8175, + "n_pred": 10259, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9214574898785425, + "FN": 1066, + "FP": 292, + "IoU": 0.8543543543543544, + "TN": 787716, + "TP": 7966, + "n_pred": 8258, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7870248180154101, + "FN": 3224, + "FP": 1779, + "IoU": 0.6488383519337404, + "TN": 882423, + "TP": 9244, + "n_pred": 11023, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7884702449821419, + "FN": 2501, + "FP": 1704, + "IoU": 0.6508055140342136, + "TN": 884628, + "TP": 7837, + "n_pred": 9541, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9212667608969706, + "FN": 194, + "FP": 1867, + "IoU": 0.8540264891281252, + "TN": 882551, + "TP": 12058, + "n_pred": 13925, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7037497258972297, + "FN": 1542, + "FP": 2511, + "IoU": 0.5429119206044886, + "TN": 887803, + "TP": 4814, + "n_pred": 7325, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8302158273381295, + "FN": 2286, + "FP": 1490, + "IoU": 0.7097170971709718, + "TN": 883662, + "TP": 9232, + "n_pred": 10722, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9065420560747663, + "FN": 387, + "FP": 1353, + "IoU": 0.8290598290598291, + "TN": 886491, + "TP": 8439, + "n_pred": 9792, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9238225880201189, + "FN": 1118, + "FP": 548, + "IoU": 0.8584296397008837, + "TN": 750280, + "TP": 10102, + "n_pred": 10650, + "n_ref": 11220 + }, + "2": { + "Dice": 0.878969957081545, + "FN": 1708, + "FP": 689, + "IoU": 0.7840735068912711, + "TN": 750947, + "TP": 8704, + "n_pred": 9393, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9707453574154159, + "FN": 304, + "FP": 386, + "IoU": 0.9431537320810677, + "TN": 749910, + "TP": 11448, + "n_pred": 11834, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7855255600229754, + "FN": 373, + "FP": 1494, + "IoU": 0.6468028755202422, + "TN": 756762, + "TP": 3419, + "n_pred": 4913, + "n_ref": 3792 + }, + "2": { + "Dice": 0.86971846897736, + "FN": 2009, + "FP": 874, + "IoU": 0.7694706540860387, + "TN": 749542, + "TP": 9623, + "n_pred": 10497, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9349678576767828, + "FN": 580, + "FP": 290, + "IoU": 0.877877596855699, + "TN": 754924, + "TP": 6254, + "n_pred": 6544, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8538163001293662, + "FN": 352, + "FP": 2247, + "IoU": 0.744920993227991, + "TN": 985139, + "TP": 7590, + "n_pred": 9837, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8379614852643898, + "FN": 872, + "FP": 2174, + "IoU": 0.7211133492034426, + "TN": 984406, + "TP": 7876, + "n_pred": 10050, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9750529045333969, + "FN": 189, + "FP": 648, + "IoU": 0.951320227986507, + "TN": 978134, + "TP": 16357, + "n_pred": 17005, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7555328130996546, + "FN": 289, + "FP": 1622, + "IoU": 0.6071134868421053, + "TN": 990464, + "TP": 2953, + "n_pred": 4575, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8089107324109194, + "FN": 763, + "FP": 2814, + "IoU": 0.67913527090061, + "TN": 984180, + "TP": 7571, + "n_pred": 10385, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9147759939852285, + "FN": 272, + "FP": 1655, + "IoU": 0.8429374847175809, + "TN": 983059, + "TP": 10342, + "n_pred": 11997, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8756011663574053, + "FN": 2763, + "FP": 522, + "IoU": 0.7787282769769635, + "TN": 743170, + "TP": 11561, + "n_pred": 12083, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8741138806311457, + "FN": 1167, + "FP": 1035, + "IoU": 0.7763785924647101, + "TN": 748169, + "TP": 7645, + "n_pred": 8680, + "n_ref": 8812 + }, + "3": { + "Dice": 0.959181017654969, + "FN": 246, + "FP": 695, + "IoU": 0.9215637242643995, + "TN": 746019, + "TP": 11056, + "n_pred": 11751, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7669223636516901, + "FN": 687, + "FP": 2078, + "IoU": 0.6219578889800382, + "TN": 750702, + "TP": 4549, + "n_pred": 6627, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8635474491144595, + "FN": 1165, + "FP": 1416, + "IoU": 0.7598622999627838, + "TN": 747268, + "TP": 8167, + "n_pred": 9583, + "n_ref": 9332 + }, + "3": { + "Dice": 0.7995824634655533, + "FN": 362, + "FP": 1558, + "IoU": 0.6660869565217391, + "TN": 752266, + "TP": 3830, + "n_pred": 5388, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8849015926003199, + "FN": 1584, + "FP": 71, + "IoU": 0.7935636771859798, + "TN": 630959, + "TP": 6362, + "n_pred": 6433, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8899564095721021, + "FN": 364, + "FP": 873, + "IoU": 0.80173104664209, + "TN": 632737, + "TP": 5002, + "n_pred": 5875, + "n_ref": 5366 + }, + "3": { + "Dice": 0.955347725195134, + "FN": 541, + "FP": 94, + "IoU": 0.9145126548196015, + "TN": 631548, + "TP": 6793, + "n_pred": 6887, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7074380165289256, + "FN": 452, + "FP": 1672, + "IoU": 0.5473145780051151, + "TN": 634284, + "TP": 2568, + "n_pred": 4240, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9186728288611437, + "FN": 693, + "FP": 486, + "IoU": 0.8495789742281195, + "TN": 631138, + "TP": 6659, + "n_pred": 7145, + "n_ref": 7352 + }, + "3": { + "Dice": 0.8976752699981695, + "FN": 304, + "FP": 255, + "IoU": 0.8143473928927266, + "TN": 635965, + "TP": 2452, + "n_pred": 2707, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.904225935644248, + "FN": 2345, + "FP": 429, + "IoU": 0.8251937740248283, + "TN": 967171, + "TP": 13095, + "n_pred": 13524, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8449251920744035, + "FN": 1538, + "FP": 1530, + "IoU": 0.7314895851566603, + "TN": 971614, + "TP": 8358, + "n_pred": 9888, + "n_ref": 9896 + }, + "3": { + "Dice": 0.962497690744504, + "FN": 193, + "FP": 822, + "IoU": 0.9277065527065527, + "TN": 969000, + "TP": 13025, + "n_pred": 13847, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8411331976835186, + "FN": 814, + "FP": 1216, + "IoU": 0.7258238789843328, + "TN": 975636, + "TP": 5374, + "n_pred": 6590, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8652576633744434, + "FN": 1502, + "FP": 1131, + "IoU": 0.7625146568052674, + "TN": 971953, + "TP": 8454, + "n_pred": 9585, + "n_ref": 9956 + }, + "3": { + "Dice": 0.8456631717867878, + "FN": 223, + "FP": 1882, + "IoU": 0.7325965447154471, + "TN": 975168, + "TP": 5767, + "n_pred": 7649, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9208027410670583, + "FN": 2071, + "FP": 356, + "IoU": 0.8532293178519593, + "TN": 1032040, + "TP": 14109, + "n_pred": 14465, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8689409538649897, + "FN": 901, + "FP": 1454, + "IoU": 0.7682542806534147, + "TN": 1038414, + "TP": 7807, + "n_pred": 9261, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9671482766970699, + "FN": 278, + "FP": 536, + "IoU": 0.9363863707408565, + "TN": 1035780, + "TP": 11982, + "n_pred": 12518, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.759515570934256, + "FN": 601, + "FP": 2457, + "IoU": 0.6122733612273361, + "TN": 1040689, + "TP": 4829, + "n_pred": 7286, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8669385289231234, + "FN": 1712, + "FP": 931, + "IoU": 0.765129298853639, + "TN": 1037323, + "TP": 8610, + "n_pred": 9541, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9330445057109098, + "FN": 342, + "FP": 338, + "IoU": 0.8744924326319675, + "TN": 1043158, + "TP": 4738, + "n_pred": 5076, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.887287211342406, + "FN": 1806, + "FP": 571, + "IoU": 0.7974090173016279, + "TN": 477483, + "TP": 9356, + "n_pred": 9927, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7602584814216479, + "FN": 364, + "FP": 1120, + "IoU": 0.6132395100338807, + "TN": 485379, + "TP": 2353, + "n_pred": 3473, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9490968801313628, + "FN": 316, + "FP": 149, + "IoU": 0.903125, + "TN": 484416, + "TP": 4335, + "n_pred": 4484, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8881199538638985, + "FN": 876, + "FP": 579, + "IoU": 0.7987551867219918, + "TN": 481986, + "TP": 5775, + "n_pred": 6354, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8678846444209573, + "FN": 486, + "FP": 389, + "IoU": 0.766604427847426, + "TN": 485467, + "TP": 2874, + "n_pred": 3263, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8728487027998972, + "FN": 91, + "FP": 404, + "IoU": 0.7743846855059252, + "TN": 487022, + "TP": 1699, + "n_pred": 2103, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8644301625222921, + "FN": 3031, + "FP": 998, + "IoU": 0.7612302951286002, + "TN": 463606, + "TP": 12845, + "n_pred": 13843, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7970367363507205, + "FN": 592, + "FP": 1408, + "IoU": 0.6625611607896069, + "TN": 474553, + "TP": 3927, + "n_pred": 5335, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9554335894621295, + "FN": 432, + "FP": 177, + "IoU": 0.9146700294241278, + "TN": 473343, + "TP": 6528, + "n_pred": 6705, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.857387092178373, + "FN": 2584, + "FP": 419, + "IoU": 0.7503740648379053, + "TN": 468450, + "TP": 9027, + "n_pred": 9446, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8328709461398641, + "FN": 1309, + "FP": 438, + "IoU": 0.7136065573770491, + "TN": 474380, + "TP": 4353, + "n_pred": 4791, + "n_ref": 5662 + }, + "3": { + "Dice": 0.9144312393887946, + "FN": 113, + "FP": 391, + "IoU": 0.8423522051923679, + "TN": 477283, + "TP": 2693, + "n_pred": 3084, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7675831956573047, + "FN": 7663, + "FP": 215, + "IoU": 0.6228275961124144, + "TN": 623753, + "TP": 13009, + "n_pred": 13224, + "n_ref": 20672 + }, + "2": { + "Dice": 0.770121531758771, + "FN": 2349, + "FP": 1661, + "IoU": 0.6261769367017805, + "TN": 633913, + "TP": 6717, + "n_pred": 8378, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9321192052980133, + "FN": 1612, + "FP": 192, + "IoU": 0.8728682170542635, + "TN": 630450, + "TP": 12386, + "n_pred": 12578, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.783969465648855, + "FN": 5062, + "FP": 598, + "IoU": 0.6446955430006277, + "TN": 628710, + "TP": 10270, + "n_pred": 10868, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8294892915980231, + "FN": 3103, + "FP": 623, + "IoU": 0.7086558761435608, + "TN": 631851, + "TP": 9063, + "n_pred": 9686, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9071562966327127, + "FN": 571, + "FP": 860, + "IoU": 0.8300878651151745, + "TN": 636218, + "TP": 6991, + "n_pred": 7851, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8801815571302858, + "FN": 3048, + "FP": 2126, + "IoU": 0.7860038051120853, + "TN": 540302, + "TP": 19004, + "n_pred": 21130, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7599147986611218, + "FN": 723, + "FP": 1644, + "IoU": 0.6127924096188451, + "TN": 558367, + "TP": 3746, + "n_pred": 5390, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9618497109826589, + "FN": 409, + "FP": 185, + "IoU": 0.9265033407572383, + "TN": 556398, + "TP": 7488, + "n_pred": 7673, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6674724684394305, + "FN": 977, + "FP": 6451, + "IoU": 0.5009070751864544, + "TN": 549597, + "TP": 7455, + "n_pred": 13906, + "n_ref": 8432 + }, + "2": { + "Dice": 0.7912475370735248, + "FN": 1048, + "FP": 965, + "IoU": 0.6545984900480439, + "TN": 558652, + "TP": 3815, + "n_pred": 4780, + "n_ref": 4863 + }, + "3": { + "Dice": 0.860563188681812, + "FN": 289, + "FP": 736, + "IoU": 0.7552531041069723, + "TN": 560292, + "TP": 3163, + "n_pred": 3899, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.46730060159130604, + "FN": 5167, + "FP": 323, + "IoU": 0.3048873132438592, + "TN": 410982, + "TP": 2408, + "n_pred": 2731, + "n_ref": 7575 + }, + "2": { + "Dice": 0.41701769165964614, + "FN": 1866, + "FP": 902, + "IoU": 0.26343799893560405, + "TN": 415122, + "TP": 990, + "n_pred": 1892, + "n_ref": 2856 + }, + "3": { + "Dice": 0.7280484448114506, + "FN": 1554, + "FP": 422, + "IoU": 0.5723869292360961, + "TN": 414259, + "TP": 2645, + "n_pred": 3067, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4287020109689214, + "FN": 3330, + "FP": 420, + "IoU": 0.2728330424665503, + "TN": 413723, + "TP": 1407, + "n_pred": 1827, + "n_ref": 4737 + }, + "2": { + "Dice": 0.48748991121872476, + "FN": 1785, + "FP": 755, + "IoU": 0.3223052294557097, + "TN": 415132, + "TP": 1208, + "n_pred": 1963, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8348040221629387, + "FN": 349, + "FP": 456, + "IoU": 0.7164494540331102, + "TN": 416041, + "TP": 2034, + "n_pred": 2490, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9224128470571021, + "FN": 958, + "FP": 1163, + "IoU": 0.8559983705614773, + "TN": 481781, + "TP": 12608, + "n_pred": 13771, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8522425644864902, + "FN": 1411, + "FP": 760, + "IoU": 0.7425284629981025, + "TN": 488078, + "TP": 6261, + "n_pred": 7021, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9615753468448309, + "FN": 252, + "FP": 349, + "IoU": 0.9259943356729466, + "TN": 488389, + "TP": 7520, + "n_pred": 7869, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8900607589132179, + "FN": 1616, + "FP": 1261, + "IoU": 0.8019004337946706, + "TN": 481987, + "TP": 11646, + "n_pred": 12907, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8335939536095909, + "FN": 2079, + "FP": 475, + "IoU": 0.714668752094738, + "TN": 487559, + "TP": 6397, + "n_pred": 6872, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8880688806888068, + "FN": 151, + "FP": 668, + "IoU": 0.7986725663716814, + "TN": 492442, + "TP": 3249, + "n_pred": 3917, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_003/summary_cross_val.json b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_003/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..0c612176405145d18bffe291848e9d367b71f297 --- /dev/null +++ b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_003/summary_cross_val.json @@ -0,0 +1,4560 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.6574581718843774, + "FN": 16.0, + "FP": 45.68055555555555, + "IoU": 0.5835967596633541, + "TN": 1393.6527777777776, + "TP": 111.33333333333333, + "n_pred": 157.01388888888889, + "n_ref": 127.33333333333333 + }, + "mean": { + "1": { + "Dice": 0.4140834132119783, + "FN": 26.125, + "FP": 57.0, + "IoU": 0.3372965682919065, + "TN": 1433.5833333333333, + "TP": 49.958333333333336, + "n_pred": 106.95833333333333, + "n_ref": 76.08333333333333 + }, + "2": { + "Dice": 0.7035052255962125, + "FN": 15.708333333333334, + "FP": 26.625, + "IoU": 0.6127670728242389, + "TN": 1417.6666666666667, + "TP": 106.66666666666667, + "n_pred": 133.29166666666666, + "n_ref": 122.375 + }, + "3": { + "Dice": 0.8547858768449413, + "FN": 6.166666666666667, + "FP": 53.416666666666664, + "IoU": 0.8007266378739172, + "TN": 1329.7083333333333, + "TP": 177.375, + "n_pred": 230.79166666666666, + "n_ref": 183.54166666666666 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 37, + "IoU": 0.0, + "TN": 1563, + "TP": 0, + "n_pred": 37, + "n_ref": 0 + }, + "2": { + "Dice": 0.6066350710900474, + "FN": 46, + "FP": 37, + "IoU": 0.43537414965986393, + "TN": 1453, + "TP": 64, + "n_pred": 101, + "n_ref": 110 + }, + "3": { + "Dice": 0.9216710182767625, + "FN": 9, + "FP": 51, + "IoU": 0.8547215496368039, + "TN": 1187, + "TP": 353, + "n_pred": 404, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 4000, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.4851190476190476, + "FN": 31, + "FP": 315, + "IoU": 0.32023575638506874, + "TN": 3491, + "TP": 163, + "n_pred": 478, + "n_ref": 194 + }, + "3": { + "Dice": 0.7854077253218884, + "FN": 19, + "FP": 281, + "IoU": 0.6466431095406361, + "TN": 3151, + "TP": 549, + "n_pred": 830, + "n_ref": 568 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8157894736842105, + "FN": 26, + "FP": 2, + "IoU": 0.6888888888888889, + "TN": 1510, + "TP": 62, + "n_pred": 64, + "n_ref": 88 + }, + "3": { + "Dice": 0.9908136482939632, + "FN": 2, + "FP": 26, + "IoU": 0.9817945383615084, + "TN": 62, + "TP": 1510, + "n_pred": 1536, + "n_ref": 1512 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7894736842105263, + "FN": 9, + "FP": 15, + "IoU": 0.6521739130434783, + "TN": 731, + "TP": 45, + "n_pred": 60, + "n_ref": 54 + }, + "3": { + "Dice": 0.9512195121951219, + "FN": 0, + "FP": 8, + "IoU": 0.9069767441860465, + "TN": 714, + "TP": 78, + "n_pred": 86, + "n_ref": 78 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8349514563106796, + "FN": 0, + "FP": 34, + "IoU": 0.7166666666666667, + "TN": 680, + "TP": 86, + "n_pred": 120, + "n_ref": 86 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8571428571428571, + "FN": 57, + "FP": 26, + "IoU": 0.75, + "TN": 468, + "TP": 249, + "n_pred": 275, + "n_ref": 306 + }, + "3": { + "Dice": 0.9192546583850931, + "FN": 26, + "FP": 0, + "IoU": 0.8505747126436781, + "TN": 626, + "TP": 148, + "n_pred": 148, + "n_ref": 174 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.40993788819875776, + "FN": 25, + "FP": 260, + "IoU": 0.2578125, + "TN": 2016, + "TP": 99, + "n_pred": 359, + "n_ref": 124 + }, + "2": { + "Dice": 0.8766519823788547, + "FN": 17, + "FP": 39, + "IoU": 0.7803921568627451, + "TN": 2145, + "TP": 199, + "n_pred": 238, + "n_ref": 216 + }, + "3": { + "Dice": 0.8280871670702179, + "FN": 1, + "FP": 70, + "IoU": 0.7066115702479339, + "TN": 2158, + "TP": 171, + "n_pred": 241, + "n_ref": 172 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3315696649029982, + "FN": 370, + "FP": 9, + "IoU": 0.19873150105708245, + "TN": 1127, + "TP": 94, + "n_pred": 103, + "n_ref": 464 + }, + "2": { + "Dice": 0.8654545454545455, + "FN": 65, + "FP": 46, + "IoU": 0.7628205128205128, + "TN": 1132, + "TP": 357, + "n_pred": 403, + "n_ref": 422 + }, + "3": { + "Dice": 0.9593908629441624, + "FN": 9, + "FP": 7, + "IoU": 0.9219512195121952, + "TN": 1395, + "TP": 189, + "n_pred": 196, + "n_ref": 198 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7321428571428571, + "FN": 87, + "FP": 3, + "IoU": 0.5774647887323944, + "TN": 587, + "TP": 123, + "n_pred": 126, + "n_ref": 210 + }, + "2": { + "Dice": 0.9466666666666667, + "FN": 1, + "FP": 23, + "IoU": 0.8987341772151899, + "TN": 563, + "TP": 213, + "n_pred": 236, + "n_ref": 214 + }, + "3": { + "Dice": 0.9730700179533214, + "FN": 15, + "FP": 0, + "IoU": 0.9475524475524476, + "TN": 514, + "TP": 271, + "n_pred": 271, + "n_ref": 286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9424703891708968, + "FN": 67, + "FP": 1, + "IoU": 0.8912, + "TN": 2575, + "TP": 557, + "n_pred": 558, + "n_ref": 624 + }, + "2": { + "Dice": 0.927400468384075, + "FN": 0, + "FP": 62, + "IoU": 0.8646288209606987, + "TN": 2742, + "TP": 396, + "n_pred": 458, + "n_ref": 396 + }, + "3": { + "Dice": 0.9329529243937232, + "FN": 47, + "FP": 0, + "IoU": 0.8743315508021391, + "TN": 2826, + "TP": 327, + "n_pred": 327, + "n_ref": 374 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 4000, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 16, + "IoU": 0.0, + "TN": 3984, + "TP": 0, + "n_pred": 16, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 800, + "IoU": 0.0, + "TN": 3200, + "TP": 0, + "n_pred": 800, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 59, + "IoU": 0.0, + "TN": 1541, + "TP": 0, + "n_pred": 59, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.06972477064220184, + "FN": 20, + "FP": 487, + "IoU": 0.03612167300380228, + "TN": 1874, + "TP": 19, + "n_pred": 506, + "n_ref": 39 + }, + "2": { + "Dice": 0.8414096916299559, + "FN": 45, + "FP": 27, + "IoU": 0.7262357414448669, + "TN": 2137, + "TP": 191, + "n_pred": 218, + "n_ref": 236 + }, + "3": { + "Dice": 0.9825503355704698, + "FN": 12, + "FP": 1, + "IoU": 0.9656992084432717, + "TN": 2021, + "TP": 366, + "n_pred": 367, + "n_ref": 378 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 439, + "IoU": 0.0, + "TN": 1161, + "TP": 0, + "n_pred": 439, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 1598, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8200371057513914, + "FN": 58, + "FP": 39, + "IoU": 0.6949685534591195, + "TN": 1282, + "TP": 221, + "n_pred": 260, + "n_ref": 279 + }, + "2": { + "Dice": 0.9249329758713136, + "FN": 40, + "FP": 16, + "IoU": 0.8603491271820449, + "TN": 1199, + "TP": 345, + "n_pred": 361, + "n_ref": 385 + }, + "3": { + "Dice": 0.9473684210526315, + "FN": 8, + "FP": 1, + "IoU": 0.9, + "TN": 1510, + "TP": 81, + "n_pred": 82, + "n_ref": 89 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.912396694214876, + "FN": 40, + "FP": 13, + "IoU": 0.8389057750759878, + "TN": 471, + "TP": 276, + "n_pred": 289, + "n_ref": 316 + }, + "3": { + "Dice": 0.9204301075268817, + "FN": 0, + "FP": 37, + "IoU": 0.852589641434263, + "TN": 549, + "TP": 214, + "n_pred": 251, + "n_ref": 214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient090_frame04.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.695657644226482, + "FN": 45.25, + "FP": 14.263888888888891, + "IoU": 0.6183824199623674, + "TN": 1623.7222222222224, + "TP": 150.0972222222222, + "n_pred": 164.3611111111111, + "n_ref": 195.3472222222222 + }, + "mean": { + "1": { + "Dice": 0.36825408938176996, + "FN": 84.20833333333333, + "FP": 16.291666666666668, + "IoU": 0.2917647207438569, + "TN": 1636.125, + "TP": 96.70833333333333, + "n_pred": 113.0, + "n_ref": 180.91666666666666 + }, + "2": { + "Dice": 0.8142986871631996, + "FN": 38.625, + "FP": 15.416666666666666, + "IoU": 0.7318629282649244, + "TN": 1566.2916666666667, + "TP": 213.0, + "n_pred": 228.41666666666666, + "n_ref": 251.625 + }, + "3": { + "Dice": 0.9044201561344763, + "FN": 12.916666666666666, + "FP": 11.083333333333334, + "IoU": 0.8315196108783209, + "TN": 1668.75, + "TP": 140.58333333333334, + "n_pred": 151.66666666666666, + "n_ref": 153.5 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3870967741935484, + "FN": 0, + "FP": 19, + "IoU": 0.24, + "TN": 1575, + "TP": 6, + "n_pred": 25, + "n_ref": 6 + }, + "2": { + "Dice": 0.7959183673469388, + "FN": 19, + "FP": 41, + "IoU": 0.6610169491525424, + "TN": 1423, + "TP": 117, + "n_pred": 158, + "n_ref": 136 + }, + "3": { + "Dice": 0.967843137254902, + "FN": 41, + "FP": 0, + "IoU": 0.9376899696048632, + "TN": 942, + "TP": 617, + "n_pred": 617, + "n_ref": 658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7413213885778276, + "FN": 462, + "FP": 0, + "IoU": 0.5889679715302492, + "TN": 1276, + "TP": 662, + "n_pred": 662, + "n_ref": 1124 + }, + "2": { + "Dice": 0.8271604938271605, + "FN": 54, + "FP": 2, + "IoU": 0.7052631578947368, + "TN": 2210, + "TP": 134, + "n_pred": 136, + "n_ref": 188 + }, + "3": { + "Dice": 0.9206349206349206, + "FN": 2, + "FP": 18, + "IoU": 0.8529411764705882, + "TN": 2264, + "TP": 116, + "n_pred": 134, + "n_ref": 118 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 23, + "IoU": 0.0, + "TN": 3177, + "TP": 0, + "n_pred": 23, + "n_ref": 0 + }, + "2": { + "Dice": 0.9805097451274363, + "FN": 11, + "FP": 2, + "IoU": 0.961764705882353, + "TN": 2860, + "TP": 327, + "n_pred": 329, + "n_ref": 338 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 13, + "IoU": 0.0, + "TN": 1587, + "TP": 0, + "n_pred": 13, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8421052631578947, + "FN": 88, + "FP": 2, + "IoU": 0.7272727272727273, + "TN": 470, + "TP": 240, + "n_pred": 242, + "n_ref": 328 + }, + "3": { + "Dice": 0.912621359223301, + "FN": 2, + "FP": 88, + "IoU": 0.8392857142857143, + "TN": 240, + "TP": 470, + "n_pred": 558, + "n_ref": 472 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9436201780415431, + "FN": 26, + "FP": 12, + "IoU": 0.8932584269662921, + "TN": 444, + "TP": 318, + "n_pred": 330, + "n_ref": 344 + }, + "3": { + "Dice": 0.9520958083832335, + "FN": 3, + "FP": 13, + "IoU": 0.9085714285714286, + "TN": 625, + "TP": 159, + "n_pred": 172, + "n_ref": 162 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3137254901960784, + "FN": 0, + "FP": 70, + "IoU": 0.18604651162790697, + "TN": 3114, + "TP": 16, + "n_pred": 86, + "n_ref": 16 + }, + "2": { + "Dice": 0.9188284518828452, + "FN": 97, + "FP": 0, + "IoU": 0.8498452012383901, + "TN": 2554, + "TP": 549, + "n_pred": 549, + "n_ref": 646 + }, + "3": { + "Dice": 0.9108910891089109, + "FN": 0, + "FP": 27, + "IoU": 0.8363636363636363, + "TN": 3035, + "TP": 138, + "n_pred": 165, + "n_ref": 138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8460076045627376, + "FN": 77, + "FP": 85, + "IoU": 0.7331136738056013, + "TN": 193, + "TP": 445, + "n_pred": 530, + "n_ref": 522 + }, + "3": { + "Dice": 0.7280334728033473, + "FN": 104, + "FP": 26, + "IoU": 0.5723684210526315, + "TN": 496, + "TP": 174, + "n_pred": 200, + "n_ref": 278 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5333333333333333, + "FN": 6, + "FP": 1, + "IoU": 0.36363636363636365, + "TN": 789, + "TP": 4, + "n_pred": 5, + "n_ref": 10 + }, + "2": { + "Dice": 0.9508460918614021, + "FN": 52, + "FP": 9, + "IoU": 0.9062980030721967, + "TN": 149, + "TP": 590, + "n_pred": 599, + "n_ref": 642 + }, + "3": { + "Dice": 0.9391891891891891, + "FN": 3, + "FP": 15, + "IoU": 0.8853503184713376, + "TN": 643, + "TP": 139, + "n_pred": 154, + "n_ref": 142 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8457415128052412, + "FN": 153, + "FP": 106, + "IoU": 0.7327141382868937, + "TN": 1431, + "TP": 710, + "n_pred": 816, + "n_ref": 863 + }, + "3": { + "Dice": 0.8698167791706847, + "FN": 106, + "FP": 29, + "IoU": 0.7696245733788396, + "TN": 1814, + "TP": 451, + "n_pred": 480, + "n_ref": 557 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8956521739130435, + "FN": 23, + "FP": 1, + "IoU": 0.8110236220472441, + "TN": 673, + "TP": 103, + "n_pred": 104, + "n_ref": 126 + }, + "3": { + "Dice": 0.8636363636363636, + "FN": 1, + "FP": 5, + "IoU": 0.76, + "TN": 775, + "TP": 19, + "n_pred": 24, + "n_ref": 20 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8308080808080808, + "FN": 98, + "FP": 36, + "IoU": 0.7105831533477321, + "TN": 1937, + "TP": 329, + "n_pred": 365, + "n_ref": 427 + }, + "2": { + "Dice": 0.770949720670391, + "FN": 32, + "FP": 9, + "IoU": 0.6272727272727273, + "TN": 2290, + "TP": 69, + "n_pred": 78, + "n_ref": 101 + }, + "3": { + "Dice": 0.8571428571428571, + "FN": 2, + "FP": 0, + "IoU": 0.75, + "TN": 2392, + "TP": 6, + "n_pred": 6, + "n_ref": 8 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8045977011494253, + "FN": 34, + "FP": 0, + "IoU": 0.6730769230769231, + "TN": 1496, + "TP": 70, + "n_pred": 70, + "n_ref": 104 + }, + "2": { + "Dice": 0.9503239740820735, + "FN": 22, + "FP": 1, + "IoU": 0.9053497942386831, + "TN": 1357, + "TP": 220, + "n_pred": 221, + "n_ref": 242 + }, + "3": { + "Dice": 0.9867172675521821, + "FN": 0, + "FP": 14, + "IoU": 0.9737827715355806, + "TN": 1066, + "TP": 520, + "n_pred": 534, + "n_ref": 520 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 30, + "FP": 2, + "IoU": 0.0, + "TN": 3968, + "TP": 0, + "n_pred": 2, + "n_ref": 30 + }, + "2": { + "Dice": 0.9089767733835531, + "FN": 96, + "FP": 49, + "IoU": 0.8331415420023015, + "TN": 3131, + "TP": 724, + "n_pred": 773, + "n_ref": 820 + }, + "3": { + "Dice": 0.8275862068965517, + "FN": 16, + "FP": 9, + "IoU": 0.7058823529411765, + "TN": 3915, + "TP": 60, + "n_pred": 69, + "n_ref": 76 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1897810218978102, + "FN": 222, + "FP": 0, + "IoU": 0.10483870967741936, + "TN": 552, + "TP": 26, + "n_pred": 26, + "n_ref": 248 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 696, + "FP": 18, + "IoU": 0.0, + "TN": 1686, + "TP": 0, + "n_pred": 18, + "n_ref": 696 + }, + "2": { + "Dice": 0.0, + "FN": 6, + "FP": 0, + "IoU": 0.0, + "TN": 2394, + "TP": 0, + "n_pred": 0, + "n_ref": 6 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8241206030150754, + "FN": 210, + "FP": 0, + "IoU": 0.7008547008547008, + "TN": 1698, + "TP": 492, + "n_pred": 492, + "n_ref": 702 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 182, + "FP": 0, + "IoU": 0.0, + "TN": 2218, + "TP": 0, + "n_pred": 0, + "n_ref": 182 + }, + "2": { + "Dice": 0.43243243243243246, + "FN": 98, + "FP": 7, + "IoU": 0.27586206896551724, + "TN": 2255, + "TP": 40, + "n_pred": 47, + "n_ref": 138 + }, + "3": { + "Dice": 0.9494949494949495, + "FN": 8, + "FP": 2, + "IoU": 0.9038461538461539, + "TN": 2296, + "TP": 94, + "n_pred": 96, + "n_ref": 102 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 194, + "IoU": 0.0, + "TN": 2206, + "TP": 0, + "n_pred": 194, + "n_ref": 0 + }, + "2": { + "Dice": 0.9824561403508771, + "FN": 2, + "FP": 0, + "IoU": 0.9655172413793104, + "TN": 2342, + "TP": 56, + "n_pred": 56, + "n_ref": 58 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3111111111111111, + "FN": 31, + "FP": 0, + "IoU": 0.18421052631578946, + "TN": 3162, + "TP": 7, + "n_pred": 7, + "n_ref": 38 + }, + "2": { + "Dice": 0.8454106280193237, + "FN": 47, + "FP": 17, + "IoU": 0.7322175732217573, + "TN": 2961, + "TP": 175, + "n_pred": 192, + "n_ref": 222 + }, + "3": { + "Dice": 0.9672131147540983, + "FN": 16, + "FP": 4, + "IoU": 0.9365079365079365, + "TN": 2885, + "TP": 295, + "n_pred": 299, + "n_ref": 311 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9561699258260283, + "FN": 50, + "FP": 15, + "IoU": 0.9160206718346253, + "TN": 826, + "TP": 709, + "n_pred": 724, + "n_ref": 759 + }, + "2": { + "Dice": 0.9204368174726989, + "FN": 24, + "FP": 27, + "IoU": 0.8526011560693642, + "TN": 1254, + "TP": 295, + "n_pred": 322, + "n_ref": 319 + }, + "3": { + "Dice": 0.9133858267716536, + "FN": 6, + "FP": 16, + "IoU": 0.8405797101449275, + "TN": 1462, + "TP": 116, + "n_pred": 132, + "n_ref": 122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.5491411607922881, + "FN": 37.625, + "FP": 38.263888888888886, + "IoU": 0.46717405889517183, + "TN": 1458.3333333333333, + "TP": 99.11111111111113, + "n_pred": 137.375, + "n_ref": 136.73611111111111 + }, + "mean": { + "1": { + "Dice": 0.44146886605912833, + "FN": 36.083333333333336, + "FP": 44.291666666666664, + "IoU": 0.3547356295072392, + "TN": 1479.2916666666667, + "TP": 73.66666666666667, + "n_pred": 117.95833333333333, + "n_ref": 109.75 + }, + "2": { + "Dice": 0.6142713597633905, + "FN": 45.291666666666664, + "FP": 51.041666666666664, + "IoU": 0.5050909964474737, + "TN": 1443.7916666666667, + "TP": 93.20833333333333, + "n_pred": 144.25, + "n_ref": 138.5 + }, + "3": { + "Dice": 0.5916832565543458, + "FN": 31.5, + "FP": 19.458333333333332, + "IoU": 0.5416955507308024, + "TN": 1451.9166666666667, + "TP": 130.45833333333334, + "n_pred": 149.91666666666666, + "n_ref": 161.95833333333334 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.48148148148148145, + "FN": 112, + "FP": 0, + "IoU": 0.3170731707317073, + "TN": 1436, + "TP": 52, + "n_pred": 52, + "n_ref": 164 + }, + "2": { + "Dice": 0.6784810126582278, + "FN": 16, + "FP": 111, + "IoU": 0.5134099616858238, + "TN": 1339, + "TP": 134, + "n_pred": 245, + "n_ref": 150 + }, + "3": { + "Dice": 0.8264758497316637, + "FN": 97, + "FP": 0, + "IoU": 0.7042682926829268, + "TN": 1272, + "TP": 231, + "n_pred": 231, + "n_ref": 328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.754601226993865, + "FN": 60, + "FP": 20, + "IoU": 0.6059113300492611, + "TN": 2197, + "TP": 123, + "n_pred": 143, + "n_ref": 183 + }, + "2": { + "Dice": 0.8388059701492537, + "FN": 29, + "FP": 79, + "IoU": 0.7223650385604113, + "TN": 2011, + "TP": 281, + "n_pred": 360, + "n_ref": 310 + }, + "3": { + "Dice": 0.9798734905117884, + "FN": 32, + "FP": 3, + "IoU": 0.9605411499436303, + "TN": 1513, + "TP": 852, + "n_pred": 855, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 15, + "IoU": 0.0, + "TN": 3985, + "TP": 0, + "n_pred": 15, + "n_ref": 0 + }, + "2": { + "Dice": 0.6473988439306358, + "FN": 288, + "FP": 200, + "IoU": 0.47863247863247865, + "TN": 3064, + "TP": 448, + "n_pred": 648, + "n_ref": 736 + }, + "3": { + "Dice": 0.7051442910915935, + "FN": 470, + "FP": 0, + "IoU": 0.5445736434108527, + "TN": 2968, + "TP": 562, + "n_pred": 562, + "n_ref": 1032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7681660899653979, + "FN": 67, + "FP": 0, + "IoU": 0.6235955056179775, + "TN": 1422, + "TP": 111, + "n_pred": 111, + "n_ref": 178 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 46, + "IoU": 0.0, + "TN": 1554, + "TP": 0, + "n_pred": 46, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.40559440559440557, + "FN": 73, + "FP": 12, + "IoU": 0.2543859649122807, + "TN": 1486, + "TP": 29, + "n_pred": 41, + "n_ref": 102 + }, + "2": { + "Dice": 0.640083945435467, + "FN": 0, + "FP": 343, + "IoU": 0.470679012345679, + "TN": 952, + "TP": 305, + "n_pred": 648, + "n_ref": 305 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.26533166458072593, + "FN": 568, + "FP": 19, + "IoU": 0.15295815295815296, + "TN": 107, + "TP": 106, + "n_pred": 125, + "n_ref": 674 + }, + "2": { + "Dice": 0.0, + "FN": 8, + "FP": 0, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 0, + "n_ref": 8 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 526, + "FP": 0, + "IoU": 0.0, + "TN": 274, + "TP": 0, + "n_pred": 0, + "n_ref": 526 + }, + "3": { + "Dice": 0.0, + "FN": 46, + "FP": 0, + "IoU": 0.0, + "TN": 754, + "TP": 0, + "n_pred": 0, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.822429906542056, + "FN": 28, + "FP": 48, + "IoU": 0.6984126984126984, + "TN": 1348, + "TP": 176, + "n_pred": 224, + "n_ref": 204 + }, + "3": { + "Dice": 0.955719557195572, + "FN": 48, + "FP": 0, + "IoU": 0.9151943462897526, + "TN": 1034, + "TP": 518, + "n_pred": 518, + "n_ref": 566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 245, + "IoU": 0.0, + "TN": 555, + "TP": 0, + "n_pred": 245, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 167, + "IoU": 0.0, + "TN": 633, + "TP": 0, + "n_pred": 167, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 208, + "IoU": 0.0, + "TN": 592, + "TP": 0, + "n_pred": 208, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7733990147783252, + "FN": 3, + "FP": 89, + "IoU": 0.6305220883534136, + "TN": 1351, + "TP": 157, + "n_pred": 246, + "n_ref": 160 + }, + "3": { + "Dice": 0.9415481832543444, + "FN": 34, + "FP": 3, + "IoU": 0.8895522388059701, + "TN": 1265, + "TP": 298, + "n_pred": 301, + "n_ref": 332 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7011494252873564, + "FN": 1, + "FP": 51, + "IoU": 0.5398230088495575, + "TN": 2287, + "TP": 61, + "n_pred": 112, + "n_ref": 62 + }, + "2": { + "Dice": 0.9226006191950464, + "FN": 23, + "FP": 2, + "IoU": 0.8563218390804598, + "TN": 2226, + "TP": 149, + "n_pred": 151, + "n_ref": 172 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7971698113207547, + "FN": 67, + "FP": 19, + "IoU": 0.6627450980392157, + "TN": 545, + "TP": 169, + "n_pred": 188, + "n_ref": 236 + }, + "3": { + "Dice": 0.9723320158102767, + "FN": 19, + "FP": 2, + "IoU": 0.9461538461538461, + "TN": 410, + "TP": 369, + "n_pred": 371, + "n_ref": 388 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.33771106941838647, + "FN": 9, + "FP": 344, + "IoU": 0.20316027088036118, + "TN": 2757, + "TP": 90, + "n_pred": 434, + "n_ref": 99 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9431939978563773, + "FN": 28, + "FP": 25, + "IoU": 0.8924949290060852, + "TN": 307, + "TP": 440, + "n_pred": 465, + "n_ref": 468 + }, + "2": { + "Dice": 0.8333333333333334, + "FN": 1, + "FP": 15, + "IoU": 0.7142857142857143, + "TN": 744, + "TP": 40, + "n_pred": 55, + "n_ref": 41 + }, + "3": { + "Dice": 0.75, + "FN": 2, + "FP": 0, + "IoU": 0.6, + "TN": 795, + "TP": 3, + "n_pred": 3, + "n_ref": 5 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9670942554378137, + "FN": 15, + "FP": 44, + "IoU": 0.9362850971922246, + "TN": 674, + "TP": 867, + "n_pred": 911, + "n_ref": 882 + }, + "2": { + "Dice": 0.8328611898016998, + "FN": 11, + "FP": 48, + "IoU": 0.7135922330097088, + "TN": 1394, + "TP": 147, + "n_pred": 195, + "n_ref": 158 + }, + "3": { + "Dice": 0.9691056910569106, + "FN": 8, + "FP": 11, + "IoU": 0.9400630914826499, + "TN": 1283, + "TP": 298, + "n_pred": 309, + "n_ref": 306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 288, + "IoU": 0.0, + "TN": 1312, + "TP": 0, + "n_pred": 288, + "n_ref": 0 + }, + "2": { + "Dice": 0.6593406593406593, + "FN": 20, + "FP": 104, + "IoU": 0.4918032786885246, + "TN": 1356, + "TP": 120, + "n_pred": 224, + "n_ref": 140 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 194, + "IoU": 0.0, + "TN": 1406, + "TP": 0, + "n_pred": 194, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.6094314425931212, + "FN": 14.041666666666666, + "FP": 17.36111111111111, + "IoU": 0.5275402053641619, + "TN": 1195.652777777778, + "TP": 72.94444444444444, + "n_pred": 90.30555555555554, + "n_ref": 86.9861111111111 + }, + "mean": { + "1": { + "Dice": 0.2888003409333049, + "FN": 9.083333333333334, + "FP": 16.458333333333332, + "IoU": 0.21361436097427478, + "TN": 1256.1666666666667, + "TP": 18.291666666666668, + "n_pred": 34.75, + "n_ref": 27.375 + }, + "2": { + "Dice": 0.7181329823492596, + "FN": 28.0, + "FP": 17.666666666666668, + "IoU": 0.6086976839233, + "TN": 1175.375, + "TP": 78.95833333333333, + "n_pred": 96.625, + "n_ref": 106.95833333333333 + }, + "3": { + "Dice": 0.8213610044967989, + "FN": 5.041666666666667, + "FP": 17.958333333333332, + "IoU": 0.7603085711949111, + "TN": 1155.4166666666667, + "TP": 121.58333333333333, + "n_pred": 139.54166666666666, + "n_ref": 126.625 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 132, + "IoU": 0.0, + "TN": 668, + "TP": 0, + "n_pred": 132, + "n_ref": 0 + }, + "2": { + "Dice": 0.875, + "FN": 22, + "FP": 22, + "IoU": 0.7777777777777778, + "TN": 602, + "TP": 154, + "n_pred": 176, + "n_ref": 176 + }, + "3": { + "Dice": 0.9551451187335093, + "FN": 17, + "FP": 0, + "IoU": 0.9141414141414141, + "TN": 602, + "TP": 181, + "n_pred": 181, + "n_ref": 198 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6167146974063401, + "FN": 121, + "FP": 12, + "IoU": 0.44583333333333336, + "TN": 2960, + "TP": 107, + "n_pred": 119, + "n_ref": 228 + }, + "3": { + "Dice": 0.9372637944066515, + "FN": 0, + "FP": 83, + "IoU": 0.8819345661450925, + "TN": 2497, + "TP": 620, + "n_pred": 703, + "n_ref": 620 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 3, + "FP": 20, + "IoU": 0.0, + "TN": 1577, + "TP": 0, + "n_pred": 20, + "n_ref": 3 + }, + "2": { + "Dice": 0.8962868117797695, + "FN": 16, + "FP": 65, + "IoU": 0.8120649651972158, + "TN": 1169, + "TP": 350, + "n_pred": 415, + "n_ref": 366 + }, + "3": { + "Dice": 0.9668109668109668, + "FN": 9, + "FP": 14, + "IoU": 0.9357541899441341, + "TN": 1242, + "TP": 335, + "n_pred": 349, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9217391304347826, + "FN": 3, + "FP": 42, + "IoU": 0.8548387096774194, + "TN": 1290, + "TP": 265, + "n_pred": 307, + "n_ref": 268 + }, + "3": { + "Dice": 0.9672619047619048, + "FN": 19, + "FP": 3, + "IoU": 0.9365994236311239, + "TN": 1253, + "TP": 325, + "n_pred": 328, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.860655737704918, + "FN": 68, + "FP": 0, + "IoU": 0.7553956834532374, + "TN": 2122, + "TP": 210, + "n_pred": 210, + "n_ref": 278 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7507692307692307, + "FN": 0, + "FP": 243, + "IoU": 0.6009852216748769, + "TN": 191, + "TP": 366, + "n_pred": 609, + "n_ref": 366 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 124, + "IoU": 0.0, + "TN": 1476, + "TP": 0, + "n_pred": 124, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 1572, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.40443213296398894, + "FN": 215, + "FP": 0, + "IoU": 0.2534722222222222, + "TN": 2112, + "TP": 73, + "n_pred": 73, + "n_ref": 288 + }, + "2": { + "Dice": 0.7018072289156626, + "FN": 198, + "FP": 0, + "IoU": 0.5406032482598608, + "TN": 1969, + "TP": 233, + "n_pred": 233, + "n_ref": 431 + }, + "3": { + "Dice": 0.8738170347003155, + "FN": 0, + "FP": 160, + "IoU": 0.7759103641456583, + "TN": 1686, + "TP": 554, + "n_pred": 714, + "n_ref": 554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6912065439672802, + "FN": 91, + "FP": 60, + "IoU": 0.528125, + "TN": 480, + "TP": 169, + "n_pred": 229, + "n_ref": 260 + }, + "3": { + "Dice": 0.8920863309352518, + "FN": 60, + "FP": 0, + "IoU": 0.8051948051948052, + "TN": 492, + "TP": 248, + "n_pred": 248, + "n_ref": 308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8820754716981132, + "FN": 19, + "FP": 31, + "IoU": 0.7890295358649789, + "TN": 1363, + "TP": 187, + "n_pred": 218, + "n_ref": 206 + }, + "3": { + "Dice": 0.9705159705159705, + "FN": 5, + "FP": 19, + "IoU": 0.9427207637231504, + "TN": 1181, + "TP": 395, + "n_pred": 414, + "n_ref": 400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8860759493670886, + "FN": 13, + "FP": 14, + "IoU": 0.7954545454545454, + "TN": 2268, + "TP": 105, + "n_pred": 119, + "n_ref": 118 + }, + "3": { + "Dice": 0.8727272727272727, + "FN": 11, + "FP": 3, + "IoU": 0.7741935483870968, + "TN": 2338, + "TP": 48, + "n_pred": 51, + "n_ref": 59 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5679012345679012, + "FN": 121, + "FP": 54, + "IoU": 0.39655172413793105, + "TN": 510, + "TP": 115, + "n_pred": 169, + "n_ref": 236 + }, + "3": { + "Dice": 0.7779816513761468, + "FN": 0, + "FP": 121, + "IoU": 0.6366366366366366, + "TN": 467, + "TP": 212, + "n_pred": 333, + "n_ref": 212 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.5733580890151677, + "FN": 31.956521739130437, + "FP": 44.275362318840585, + "IoU": 0.5002398696172959, + "TN": 1555.7536231884058, + "TP": 107.14492753623189, + "n_pred": 151.42028985507247, + "n_ref": 139.10144927536234 + }, + "mean": { + "1": { + "Dice": 0.2921140407481598, + "FN": 49.608695652173914, + "FP": 67.1304347826087, + "IoU": 0.2517547670865331, + "TN": 1533.2173913043478, + "TP": 89.17391304347827, + "n_pred": 156.30434782608697, + "n_ref": 138.7826086956522 + }, + "2": { + "Dice": 0.669471458424386, + "FN": 40.130434782608695, + "FP": 33.30434782608695, + "IoU": 0.5577228430011482, + "TN": 1579.2173913043478, + "TP": 86.47826086956522, + "n_pred": 119.78260869565217, + "n_ref": 126.6086956521739 + }, + "3": { + "Dice": 0.7584887678729573, + "FN": 6.130434782608695, + "FP": 32.391304347826086, + "IoU": 0.6912419987642063, + "TN": 1554.8260869565217, + "TP": 145.7826086956522, + "n_pred": 178.17391304347825, + "n_ref": 151.91304347826087 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.3726235741444867, + "FN": 165, + "FP": 0, + "IoU": 0.22897196261682243, + "TN": 4586, + "TP": 49, + "n_pred": 49, + "n_ref": 214 + }, + "2": { + "Dice": 0.8806584362139918, + "FN": 79, + "FP": 66, + "IoU": 0.7867647058823529, + "TN": 4120, + "TP": 535, + "n_pred": 601, + "n_ref": 614 + }, + "3": { + "Dice": 0.9387308533916849, + "FN": 11, + "FP": 45, + "IoU": 0.8845360824742268, + "TN": 4315, + "TP": 429, + "n_pred": 474, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 69, + "IoU": 0.0, + "TN": 731, + "TP": 0, + "n_pred": 69, + "n_ref": 0 + }, + "2": { + "Dice": 0.935064935064935, + "FN": 2, + "FP": 3, + "IoU": 0.8780487804878049, + "TN": 759, + "TP": 36, + "n_pred": 39, + "n_ref": 38 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5757575757575758, + "FN": 56, + "FP": 0, + "IoU": 0.40425531914893614, + "TN": 1506, + "TP": 38, + "n_pred": 38, + "n_ref": 94 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.84779299847793, + "FN": 167, + "FP": 33, + "IoU": 0.7357992073976222, + "TN": 3243, + "TP": 557, + "n_pred": 590, + "n_ref": 724 + }, + "2": { + "Dice": 0.8771498771498771, + "FN": 15, + "FP": 85, + "IoU": 0.7811816192560175, + "TN": 3543, + "TP": 357, + "n_pred": 442, + "n_ref": 372 + }, + "3": { + "Dice": 0.974152785755313, + "FN": 30, + "FP": 15, + "IoU": 0.9496080627099664, + "TN": 3107, + "TP": 848, + "n_pred": 863, + "n_ref": 878 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 110, + "IoU": 0.0, + "TN": 1490, + "TP": 0, + "n_pred": 110, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 92, + "IoU": 0.0, + "TN": 1508, + "TP": 0, + "n_pred": 92, + "n_ref": 0 + }, + "2": { + "Dice": 0.8439306358381503, + "FN": 27, + "FP": 0, + "IoU": 0.73, + "TN": 1500, + "TP": 73, + "n_pred": 73, + "n_ref": 100 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.21891891891891893, + "FN": 481, + "FP": 97, + "IoU": 0.12291350531107739, + "TN": 2541, + "TP": 81, + "n_pred": 178, + "n_ref": 562 + }, + "3": { + "Dice": 0.3202247191011236, + "FN": 0, + "FP": 484, + "IoU": 0.19063545150501673, + "TN": 2602, + "TP": 114, + "n_pred": 598, + "n_ref": 114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 60, + "IoU": 0.0, + "TN": 740, + "TP": 0, + "n_pred": 60, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 41, + "IoU": 0.0, + "TN": 759, + "TP": 0, + "n_pred": 41, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 187, + "IoU": 0.0, + "TN": 613, + "TP": 0, + "n_pred": 187, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9488372093023256, + "FN": 18, + "FP": 4, + "IoU": 0.9026548672566371, + "TN": 1374, + "TP": 204, + "n_pred": 208, + "n_ref": 222 + }, + "2": { + "Dice": 0.8947368421052632, + "FN": 21, + "FP": 23, + "IoU": 0.8095238095238095, + "TN": 1369, + "TP": 187, + "n_pred": 210, + "n_ref": 208 + }, + "3": { + "Dice": 0.9764309764309764, + "FN": 21, + "FP": 0, + "IoU": 0.9539473684210527, + "TN": 1144, + "TP": 435, + "n_pred": 435, + "n_ref": 456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.886240520043337, + "FN": 105, + "FP": 0, + "IoU": 0.7957198443579766, + "TN": 1086, + "TP": 409, + "n_pred": 409, + "n_ref": 514 + }, + "2": { + "Dice": 0.48295454545454547, + "FN": 61, + "FP": 121, + "IoU": 0.31835205992509363, + "TN": 1333, + "TP": 85, + "n_pred": 206, + "n_ref": 146 + }, + "3": { + "Dice": 0.8364611260053619, + "FN": 0, + "FP": 61, + "IoU": 0.7188940092165899, + "TN": 1383, + "TP": 156, + "n_pred": 217, + "n_ref": 156 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.05161290322580645, + "FN": 6, + "FP": 435, + "IoU": 0.026490066225165563, + "TN": 1947, + "TP": 12, + "n_pred": 447, + "n_ref": 18 + }, + "2": { + "Dice": 0.7095292766934558, + "FN": 63, + "FP": 190, + "IoU": 0.5498220640569395, + "TN": 1838, + "TP": 309, + "n_pred": 499, + "n_ref": 372 + }, + "3": { + "Dice": 0.9263157894736842, + "FN": 0, + "FP": 49, + "IoU": 0.8627450980392157, + "TN": 2043, + "TP": 308, + "n_pred": 357, + "n_ref": 308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 100, + "IoU": 0.0, + "TN": 1500, + "TP": 0, + "n_pred": 100, + "n_ref": 0 + }, + "2": { + "Dice": 0.5170068027210885, + "FN": 58, + "FP": 13, + "IoU": 0.3486238532110092, + "TN": 1491, + "TP": 38, + "n_pred": 51, + "n_ref": 96 + }, + "3": { + "Dice": 0.784, + "FN": 79, + "FP": 2, + "IoU": 0.6447368421052632, + "TN": 1372, + "TP": 147, + "n_pred": 149, + "n_ref": 226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 100, + "IoU": 0.0, + "TN": 700, + "TP": 0, + "n_pred": 100, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient075_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient075_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 772, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + }, + "2": { + "Dice": 0.6875, + "FN": 48, + "FP": 92, + "IoU": 0.5238095238095238, + "TN": 506, + "TP": 154, + "n_pred": 246, + "n_ref": 202 + }, + "3": { + "Dice": 0.8285714285714286, + "FN": 0, + "FP": 48, + "IoU": 0.7073170731707317, + "TN": 636, + "TP": 116, + "n_pred": 164, + "n_ref": 116 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9390329362298528, + "FN": 86, + "FP": 1, + "IoU": 0.8850726552179656, + "TN": 3243, + "TP": 670, + "n_pred": 671, + "n_ref": 756 + }, + "2": { + "Dice": 0.8656716417910447, + "FN": 12, + "FP": 6, + "IoU": 0.7631578947368421, + "TN": 3924, + "TP": 58, + "n_pred": 64, + "n_ref": 70 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 4000, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 0, + "TP": 800, + "n_pred": 800, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 385, + "IoU": 0.0, + "TN": 2815, + "TP": 0, + "n_pred": 385, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.33557046979865773, + "FN": 594, + "FP": 0, + "IoU": 0.20161290322580644, + "TN": 56, + "TP": 150, + "n_pred": 150, + "n_ref": 744 + }, + "2": { + "Dice": 0.8837209302325582, + "FN": 0, + "FP": 10, + "IoU": 0.7916666666666666, + "TN": 752, + "TP": 38, + "n_pred": 48, + "n_ref": 38 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863778/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient096_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.6170093017022873, + "FN": 28.974637681159425, + "FP": 31.968961352657004, + "IoU": 0.5393866627004702, + "TN": 1445.4229468599035, + "TP": 108.12620772946862, + "n_pred": 140.0951690821256, + "n_ref": 137.100845410628 + }, + "mean": { + "1": { + "Dice": 0.36094415006686825, + "FN": 41.02173913043478, + "FP": 40.23442028985507, + "IoU": 0.2898332093207621, + "TN": 1467.676811594203, + "TP": 65.55978260869566, + "n_pred": 105.79420289855072, + "n_ref": 106.58152173913045 + }, + "2": { + "Dice": 0.7039359426592897, + "FN": 33.551086956521736, + "FP": 28.810869565217388, + "IoU": 0.6032283048922171, + "TN": 1436.4684782608697, + "TP": 115.6623188405797, + "n_pred": 144.4731884057971, + "n_ref": 149.21340579710144 + }, + "3": { + "Dice": 0.786147812380704, + "FN": 12.351086956521737, + "FP": 26.86159420289855, + "IoU": 0.7250984738884316, + "TN": 1432.1235507246379, + "TP": 143.15652173913045, + "n_pred": 170.01811594202897, + "n_ref": 155.50760869565218 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_004/summary.json b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_004/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..485cdac360a021c3eacc0cad7e3d74b08b060d48 --- /dev/null +++ b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_004/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8516135493467357, + "FN": 1336.7, + "FP": 1241.9066666666668, + "IoU": 0.7517894837372526, + "TN": 842992.62, + "TP": 8857.413333333332, + "n_pred": 10099.32, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8138793372510534, + "FN": 1675.56, + "FP": 1439.64, + "IoU": 0.6944702768305743, + "TN": 843134.94, + "TP": 8178.5, + "n_pred": 9618.14, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8264372199875516, + "FN": 1786.14, + "FP": 1425.74, + "IoU": 0.7100278583077071, + "TN": 842947.4, + "TP": 8269.36, + "n_pred": 9695.1, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9145240908016025, + "FN": 548.4, + "FP": 860.34, + "IoU": 0.8508703160734769, + "TN": 842895.52, + "TP": 10124.38, + "n_pred": 10984.72, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8617523167649537, + "FN": 1217, + "FP": 2065, + "IoU": 0.7570868181481756, + "TN": 1092409, + "TP": 10229, + "n_pred": 12294, + "n_ref": 11446 + }, + "2": { + "Dice": 0.84980167784057, + "FN": 1351, + "FP": 2928, + "IoU": 0.73883056640625, + "TN": 1089536, + "TP": 12105, + "n_pred": 15033, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9389279261192531, + "FN": 824, + "FP": 2218, + "IoU": 0.8848860970256566, + "TN": 1079494, + "TP": 23384, + "n_pred": 25602, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7291522024222787, + "FN": 152, + "FP": 3359, + "IoU": 0.573752579822751, + "TN": 1097683, + "TP": 4726, + "n_pred": 8085, + "n_ref": 4878 + }, + "2": { + "Dice": 0.854923434465633, + "FN": 2553, + "FP": 2004, + "IoU": 0.7466080960854092, + "TN": 1087936, + "TP": 13427, + "n_pred": 15431, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9216676208816947, + "FN": 774, + "FP": 2236, + "IoU": 0.8547157061492422, + "TN": 1085202, + "TP": 17708, + "n_pred": 19944, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8368391832706187, + "FN": 2087, + "FP": 558, + "IoU": 0.7194526941026729, + "TN": 900012, + "TP": 6783, + "n_pred": 7341, + "n_ref": 8870 + }, + "2": { + "Dice": 0.886053212588407, + "FN": 1947, + "FP": 1098, + "IoU": 0.7954178984144047, + "TN": 894556, + "TP": 11839, + "n_pred": 12937, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9735152111751746, + "FN": 644, + "FP": 486, + "IoU": 0.9483971138916796, + "TN": 887542, + "TP": 20768, + "n_pred": 21254, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.791794540461961, + "FN": 2076, + "FP": 502, + "IoU": 0.6553475935828877, + "TN": 901960, + "TP": 4902, + "n_pred": 5404, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8790890122714574, + "FN": 1895, + "FP": 1524, + "IoU": 0.7842629984856133, + "TN": 893592, + "TP": 12429, + "n_pred": 13953, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9643166558371237, + "FN": 825, + "FP": 493, + "IoU": 0.931092173367491, + "TN": 890313, + "TP": 17809, + "n_pred": 18302, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9317043688482127, + "FN": 2596, + "FP": 568, + "IoU": 0.8721409520730623, + "TN": 1401014, + "TP": 21582, + "n_pred": 22150, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8880133950556486, + "FN": 1560, + "FP": 1851, + "IoU": 0.7985828166519043, + "TN": 1408825, + "TP": 13524, + "n_pred": 15375, + "n_ref": 15084 + }, + "3": { + "Dice": 0.973287888395688, + "FN": 718, + "FP": 630, + "IoU": 0.9479657222265112, + "TN": 1399854, + "TP": 24558, + "n_pred": 25188, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.877027172161959, + "FN": 1218, + "FP": 3362, + "IoU": 0.7809869931140015, + "TN": 1404848, + "TP": 16332, + "n_pred": 19694, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8872635886200342, + "FN": 1299, + "FP": 2200, + "IoU": 0.797370859393097, + "TN": 1408492, + "TP": 13769, + "n_pred": 15969, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9675106330861558, + "FN": 976, + "FP": 483, + "IoU": 0.9370659535004098, + "TN": 1402577, + "TP": 21724, + "n_pred": 22207, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8154816583991671, + "FN": 2600, + "FP": 413, + "IoU": 0.6884500051700961, + "TN": 752377, + "TP": 6658, + "n_pred": 7071, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8538985616956851, + "FN": 1514, + "FP": 1188, + "IoU": 0.7450462351387054, + "TN": 751450, + "TP": 7896, + "n_pred": 9084, + "n_ref": 9410 + }, + "3": { + "Dice": 0.962756052141527, + "FN": 506, + "FP": 694, + "IoU": 0.9281867145421903, + "TN": 745338, + "TP": 15510, + "n_pred": 16204, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7822076457927641, + "FN": 1102, + "FP": 1023, + "IoU": 0.6423161083992593, + "TN": 756107, + "TP": 3816, + "n_pred": 4839, + "n_ref": 4918 + }, + "2": { + "Dice": 0.7913414813724047, + "FN": 3177, + "FP": 1074, + "IoU": 0.6547270955165692, + "TN": 749736, + "TP": 8061, + "n_pred": 9135, + "n_ref": 11238 + }, + "3": { + "Dice": 0.944187053474778, + "FN": 1009, + "FP": 280, + "IoU": 0.894274934383202, + "TN": 749856, + "TP": 10903, + "n_pred": 11183, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7536079308680966, + "FN": 5254, + "FP": 363, + "IoU": 0.6046315196734005, + "TN": 1064065, + "TP": 8590, + "n_pred": 8953, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8233482508060247, + "FN": 1315, + "FP": 2356, + "IoU": 0.699738262718796, + "TN": 1066046, + "TP": 8555, + "n_pred": 10911, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9610910990733357, + "FN": 928, + "FP": 487, + "IoU": 0.9250966068498226, + "TN": 1059381, + "TP": 17476, + "n_pred": 17963, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.792215226101889, + "FN": 4300, + "FP": 419, + "IoU": 0.6559241706161137, + "TN": 1064557, + "TP": 8996, + "n_pred": 9415, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8164956045473374, + "FN": 1930, + "FP": 2057, + "IoU": 0.68989655440616, + "TN": 1065415, + "TP": 8870, + "n_pred": 10927, + "n_ref": 10800 + }, + "3": { + "Dice": 0.949122519271773, + "FN": 759, + "FP": 792, + "IoU": 0.9031714321388438, + "TN": 1062254, + "TP": 14467, + "n_pred": 15259, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8037986024010034, + "FN": 2403, + "FP": 882, + "IoU": 0.6719592570401438, + "TN": 1095906, + "TP": 6729, + "n_pred": 7611, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8209960735689192, + "FN": 1550, + "FP": 2781, + "IoU": 0.6963471920353362, + "TN": 1091657, + "TP": 9932, + "n_pred": 12713, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8854483852982802, + "FN": 1173, + "FP": 1498, + "IoU": 0.7944435893489302, + "TN": 1092926, + "TP": 10323, + "n_pred": 11821, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.648870636550308, + "FN": 1156, + "FP": 896, + "IoU": 0.48024316109422494, + "TN": 1101972, + "TP": 1896, + "n_pred": 2792, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8517864003073377, + "FN": 1266, + "FP": 2592, + "IoU": 0.7418361884368309, + "TN": 1090976, + "TP": 11086, + "n_pred": 13678, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7641573185565617, + "FN": 453, + "FP": 1292, + "IoU": 0.61832895888014, + "TN": 1101348, + "TP": 2827, + "n_pred": 4119, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8833768978366053, + "FN": 1222, + "FP": 875, + "IoU": 0.79111465285387, + "TN": 1136841, + "TP": 7942, + "n_pred": 8817, + "n_ref": 9164 + }, + "2": { + "Dice": 0.868339820158368, + "FN": 3241, + "FP": 1664, + "IoU": 0.767314990512334, + "TN": 1125800, + "TP": 16175, + "n_pred": 17839, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9328766551104799, + "FN": 763, + "FP": 844, + "IoU": 0.8741975888523563, + "TN": 1134106, + "TP": 11167, + "n_pred": 12011, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6092855628577486, + "FN": 1029, + "FP": 814, + "IoU": 0.438109756097561, + "TN": 1143600, + "TP": 1437, + "n_pred": 2251, + "n_ref": 2466 + }, + "2": { + "Dice": 0.6975931862768554, + "FN": 9857, + "FP": 2783, + "IoU": 0.5356185017818436, + "TN": 1119661, + "TP": 14579, + "n_pred": 17362, + "n_ref": 24436 + }, + "3": { + "Dice": 0.43240589198036006, + "FN": 74, + "FP": 6862, + "IoU": 0.2758404677385676, + "TN": 1137302, + "TP": 2642, + "n_pred": 9504, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9369323702107887, + "FN": 756, + "FP": 737, + "IoU": 0.8813478502741795, + "TN": 788217, + "TP": 11090, + "n_pred": 11827, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8555001466705778, + "FN": 1343, + "FP": 1120, + "IoU": 0.7474882099651425, + "TN": 791046, + "TP": 7291, + "n_pred": 8411, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9424456236515248, + "FN": 572, + "FP": 415, + "IoU": 0.8911557123952359, + "TN": 791732, + "TP": 8081, + "n_pred": 8496, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6746920492721165, + "FN": 324, + "FP": 3162, + "IoU": 0.5090832277144064, + "TN": 793699, + "TP": 3615, + "n_pred": 6777, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8895769697476882, + "FN": 2022, + "FP": 617, + "IoU": 0.8011153817167834, + "TN": 787531, + "TP": 10630, + "n_pred": 11247, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8812785388127854, + "FN": 144, + "FP": 584, + "IoU": 0.7877551020408163, + "TN": 797370, + "TP": 2702, + "n_pred": 3286, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.944087472043736, + "FN": 895, + "FP": 680, + "IoU": 0.8940962883270576, + "TN": 1332968, + "TP": 13297, + "n_pred": 13977, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8776711630278589, + "FN": 1139, + "FP": 1500, + "IoU": 0.7820089211961011, + "TN": 1335734, + "TP": 9467, + "n_pred": 10967, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9706478318763387, + "FN": 562, + "FP": 452, + "IoU": 0.9429696287964004, + "TN": 1330060, + "TP": 16766, + "n_pred": 17218, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7318607764390896, + "FN": 401, + "FP": 3605, + "IoU": 0.5771139026707485, + "TN": 1338367, + "TP": 5467, + "n_pred": 9072, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8650372825186412, + "FN": 1673, + "FP": 1585, + "IoU": 0.7621724213446237, + "TN": 1334141, + "TP": 10441, + "n_pred": 12026, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9554617505168849, + "FN": 527, + "FP": 507, + "IoU": 0.914721649484536, + "TN": 1335715, + "TP": 11091, + "n_pred": 11598, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8341584158415841, + "FN": 1341, + "FP": 3081, + "IoU": 0.7154989384288747, + "TN": 836425, + "TP": 11121, + "n_pred": 14202, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8190309997947034, + "FN": 1469, + "FP": 2057, + "IoU": 0.6935245545415037, + "TN": 840463, + "TP": 7979, + "n_pred": 10036, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9607070020394289, + "FN": 823, + "FP": 622, + "IoU": 0.9243851386708529, + "TN": 832858, + "TP": 17665, + "n_pred": 18287, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7900909210699697, + "FN": 942, + "FP": 2244, + "IoU": 0.65301677194511, + "TN": 842786, + "TP": 5996, + "n_pred": 8240, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8424832787179602, + "FN": 1908, + "FP": 1601, + "IoU": 0.7278368106724579, + "TN": 839075, + "TP": 9384, + "n_pred": 10985, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9439299414887433, + "FN": 816, + "FP": 631, + "IoU": 0.8938137521097821, + "TN": 838341, + "TP": 12180, + "n_pred": 12811, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8829068941009239, + "FN": 887, + "FP": 431, + "IoU": 0.7903610625099412, + "TN": 845681, + "TP": 4969, + "n_pred": 5400, + "n_ref": 5856 + }, + "2": { + "Dice": 0.7817688757790571, + "FN": 2504, + "FP": 2083, + "IoU": 0.6417245957978599, + "TN": 839165, + "TP": 8216, + "n_pred": 10299, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9169371618809821, + "FN": 1939, + "FP": 57, + "IoU": 0.8466149235380005, + "TN": 838955, + "TP": 11017, + "n_pred": 11074, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7366191759722757, + "FN": 191, + "FP": 1177, + "IoU": 0.583053946967388, + "TN": 848687, + "TP": 1913, + "n_pred": 3090, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8397864949589088, + "FN": 2674, + "FP": 1108, + "IoU": 0.7238206513801665, + "TN": 838274, + "TP": 9912, + "n_pred": 11020, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9384570255206806, + "FN": 748, + "FP": 301, + "IoU": 0.8840499613131425, + "TN": 842921, + "TP": 7998, + "n_pred": 8299, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8096664669462752, + "FN": 2953, + "FP": 1812, + "IoU": 0.6802013422818792, + "TN": 782140, + "TP": 10135, + "n_pred": 11947, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7939336090783752, + "FN": 1368, + "FP": 2518, + "IoU": 0.6582835033415406, + "TN": 785668, + "TP": 7486, + "n_pred": 10004, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9352201742885787, + "FN": 1331, + "FP": 349, + "IoU": 0.8783225899905844, + "TN": 783233, + "TP": 12127, + "n_pred": 12476, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7449721347225587, + "FN": 1519, + "FP": 2691, + "IoU": 0.5935901148759533, + "TN": 786681, + "TP": 6149, + "n_pred": 8840, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8418462156596856, + "FN": 1241, + "FP": 1908, + "IoU": 0.7268863833477883, + "TN": 785510, + "TP": 8381, + "n_pred": 10289, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9244326690473448, + "FN": 1007, + "FP": 305, + "IoU": 0.8594837742315519, + "TN": 787703, + "TP": 8025, + "n_pred": 8330, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8820022864608852, + "FN": 1667, + "FP": 1223, + "IoU": 0.7889124242202907, + "TN": 882979, + "TP": 10801, + "n_pred": 12024, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7773337432113946, + "FN": 2752, + "FP": 1594, + "IoU": 0.6357693597049949, + "TN": 884738, + "TP": 7586, + "n_pred": 9180, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9167485822306238, + "FN": 128, + "FP": 2074, + "IoU": 0.8462934524640514, + "TN": 882344, + "TP": 12124, + "n_pred": 14198, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7691854470466932, + "FN": 1134, + "FP": 2000, + "IoU": 0.6249401627573001, + "TN": 888314, + "TP": 5222, + "n_pred": 7222, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8384919920820587, + "FN": 2199, + "FP": 1391, + "IoU": 0.7218994499961268, + "TN": 883761, + "TP": 9319, + "n_pred": 10710, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9197537531050869, + "FN": 310, + "FP": 1176, + "IoU": 0.8514297140571886, + "TN": 886668, + "TP": 8516, + "n_pred": 9692, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9375506163952129, + "FN": 801, + "FP": 587, + "IoU": 0.8824426187854663, + "TN": 750241, + "TP": 10419, + "n_pred": 11006, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8921241532706501, + "FN": 1588, + "FP": 546, + "IoU": 0.8052564336557766, + "TN": 751090, + "TP": 8824, + "n_pred": 9370, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9710963175191708, + "FN": 228, + "FP": 458, + "IoU": 0.9438165438165438, + "TN": 749838, + "TP": 11524, + "n_pred": 11982, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7949428856604193, + "FN": 208, + "FP": 1641, + "IoU": 0.6596723725381926, + "TN": 756615, + "TP": 3584, + "n_pred": 5225, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8728721477725462, + "FN": 1992, + "FP": 816, + "IoU": 0.7744215938303342, + "TN": 749600, + "TP": 9640, + "n_pred": 10456, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9437332539446264, + "FN": 494, + "FP": 262, + "IoU": 0.8934611048478016, + "TN": 754952, + "TP": 6340, + "n_pred": 6602, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8469127591176144, + "FN": 302, + "FP": 2460, + "IoU": 0.7344741395885407, + "TN": 984926, + "TP": 7640, + "n_pred": 10100, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8211228939010604, + "FN": 1121, + "FP": 2202, + "IoU": 0.6965296803652968, + "TN": 984378, + "TP": 7627, + "n_pred": 9829, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9693856463850264, + "FN": 128, + "FP": 909, + "IoU": 0.9405900887997708, + "TN": 977873, + "TP": 16418, + "n_pred": 17327, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7379859937213233, + "FN": 186, + "FP": 1984, + "IoU": 0.5847684653654803, + "TN": 990102, + "TP": 3056, + "n_pred": 5040, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7941891235081276, + "FN": 981, + "FP": 2830, + "IoU": 0.6586348978860623, + "TN": 984164, + "TP": 7353, + "n_pred": 10183, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9099189840157653, + "FN": 225, + "FP": 1832, + "IoU": 0.8347260163908083, + "TN": 982882, + "TP": 10389, + "n_pred": 12221, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9108724735148426, + "FN": 1728, + "FP": 737, + "IoU": 0.8363322488546577, + "TN": 742955, + "TP": 12596, + "n_pred": 13333, + "n_ref": 14324 + }, + "2": { + "Dice": 0.881636911662416, + "FN": 1207, + "FP": 835, + "IoU": 0.7883279776096196, + "TN": 748369, + "TP": 7605, + "n_pred": 8440, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9710776200017424, + "FN": 155, + "FP": 509, + "IoU": 0.9437812208957751, + "TN": 746205, + "TP": 11147, + "n_pred": 11656, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7457413249211357, + "FN": 508, + "FP": 2716, + "IoU": 0.5945674044265593, + "TN": 750064, + "TP": 4728, + "n_pred": 7444, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8807759953099185, + "FN": 1069, + "FP": 1168, + "IoU": 0.786952380952381, + "TN": 747516, + "TP": 8263, + "n_pred": 9431, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8159580052493438, + "FN": 306, + "FP": 1447, + "IoU": 0.6891292782408228, + "TN": 752377, + "TP": 3886, + "n_pred": 5333, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9106252907169912, + "FN": 1094, + "FP": 251, + "IoU": 0.8359155788703184, + "TN": 630779, + "TP": 6852, + "n_pred": 7103, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8760853835021708, + "FN": 523, + "FP": 847, + "IoU": 0.7794946080798326, + "TN": 632763, + "TP": 4843, + "n_pred": 5690, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9563508771929825, + "FN": 520, + "FP": 102, + "IoU": 0.9163528778913395, + "TN": 631540, + "TP": 6814, + "n_pred": 6916, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7566027964785086, + "FN": 98, + "FP": 1782, + "IoU": 0.6084964598084132, + "TN": 634174, + "TP": 2922, + "n_pred": 4704, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9190274987878368, + "FN": 718, + "FP": 451, + "IoU": 0.8501858259643726, + "TN": 631173, + "TP": 6634, + "n_pred": 7085, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9041840246332187, + "FN": 260, + "FP": 269, + "IoU": 0.8251239669421487, + "TN": 635951, + "TP": 2496, + "n_pred": 2765, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9094547964113181, + "FN": 2262, + "FP": 362, + "IoU": 0.8339450702442729, + "TN": 967238, + "TP": 13178, + "n_pred": 13540, + "n_ref": 15440 + }, + "2": { + "Dice": 0.853331975767449, + "FN": 1515, + "FP": 1366, + "IoU": 0.7441839815308116, + "TN": 971778, + "TP": 8381, + "n_pred": 9747, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9597969617832052, + "FN": 171, + "FP": 922, + "IoU": 0.9227015558698727, + "TN": 968900, + "TP": 13047, + "n_pred": 13969, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8296896499006268, + "FN": 761, + "FP": 1467, + "IoU": 0.7089483997387328, + "TN": 975385, + "TP": 5427, + "n_pred": 6894, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8850289495450786, + "FN": 1396, + "FP": 828, + "IoU": 0.7937685459940653, + "TN": 972256, + "TP": 8560, + "n_pred": 9388, + "n_ref": 9956 + }, + "3": { + "Dice": 0.8537247706422019, + "FN": 174, + "FP": 1819, + "IoU": 0.7447816621846587, + "TN": 975231, + "TP": 5816, + "n_pred": 7635, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9303709330294974, + "FN": 1482, + "FP": 718, + "IoU": 0.8698070777606818, + "TN": 1031678, + "TP": 14698, + "n_pred": 15416, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8730489660224263, + "FN": 961, + "FP": 1292, + "IoU": 0.7747, + "TN": 1038576, + "TP": 7747, + "n_pred": 9039, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9621051790919618, + "FN": 213, + "FP": 736, + "IoU": 0.9269775315481686, + "TN": 1035580, + "TP": 12047, + "n_pred": 12783, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7448346353216033, + "FN": 329, + "FP": 3166, + "IoU": 0.5934155421126105, + "TN": 1039980, + "TP": 5101, + "n_pred": 8267, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8760147229365199, + "FN": 1635, + "FP": 824, + "IoU": 0.7793827382020456, + "TN": 1037430, + "TP": 8687, + "n_pred": 9511, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9413962635201574, + "FN": 293, + "FP": 303, + "IoU": 0.8892810700352963, + "TN": 1043193, + "TP": 4787, + "n_pred": 5090, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8527031078245229, + "FN": 2629, + "FP": 319, + "IoU": 0.7432279418169149, + "TN": 477735, + "TP": 8533, + "n_pred": 8852, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7653954102691101, + "FN": 399, + "FP": 1022, + "IoU": 0.6199518587857716, + "TN": 485477, + "TP": 2318, + "n_pred": 3340, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9460794844253491, + "FN": 247, + "FP": 255, + "IoU": 0.8976763147166734, + "TN": 484310, + "TP": 4404, + "n_pred": 4659, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8534912718204489, + "FN": 1175, + "FP": 705, + "IoU": 0.744426318651441, + "TN": 481860, + "TP": 5476, + "n_pred": 6181, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8626108604325502, + "FN": 588, + "FP": 295, + "IoU": 0.7584131326949385, + "TN": 485561, + "TP": 2772, + "n_pred": 3067, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8635448136958711, + "FN": 75, + "FP": 467, + "IoU": 0.7598582188746124, + "TN": 486959, + "TP": 1715, + "n_pred": 2182, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8913129973474802, + "FN": 2435, + "FP": 843, + "IoU": 0.8039356420838567, + "TN": 463761, + "TP": 13441, + "n_pred": 14284, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7852265673494724, + "FN": 724, + "FP": 1352, + "IoU": 0.6463975472662238, + "TN": 474609, + "TP": 3795, + "n_pred": 5147, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9413027916964924, + "FN": 385, + "FP": 435, + "IoU": 0.8891142663962136, + "TN": 473085, + "TP": 6575, + "n_pred": 7010, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8769039620818186, + "FN": 2083, + "FP": 592, + "IoU": 0.780791608620831, + "TN": 468277, + "TP": 9528, + "n_pred": 10120, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8110925361392467, + "FN": 1538, + "FP": 383, + "IoU": 0.6822167080231596, + "TN": 474435, + "TP": 4124, + "n_pred": 4507, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8770967741935484, + "FN": 87, + "FP": 675, + "IoU": 0.7810973858086757, + "TN": 476999, + "TP": 2719, + "n_pred": 3394, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7759127272727273, + "FN": 7336, + "FP": 367, + "IoU": 0.6338704311041399, + "TN": 623601, + "TP": 13336, + "n_pred": 13703, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7653605379086482, + "FN": 2464, + "FP": 1584, + "IoU": 0.619906103286385, + "TN": 633990, + "TP": 6602, + "n_pred": 8186, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9250989470539915, + "FN": 1610, + "FP": 396, + "IoU": 0.8606363762678894, + "TN": 630246, + "TP": 12388, + "n_pred": 12784, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.787783162402795, + "FN": 4847, + "FP": 802, + "IoU": 0.6498698400892525, + "TN": 628506, + "TP": 10485, + "n_pred": 11287, + "n_ref": 15332 + }, + "2": { + "Dice": 0.827360964165785, + "FN": 3173, + "FP": 580, + "IoU": 0.7055546838223756, + "TN": 631894, + "TP": 8993, + "n_pred": 9573, + "n_ref": 12166 + }, + "3": { + "Dice": 0.8931739298110297, + "FN": 614, + "FP": 1048, + "IoU": 0.8069686411149826, + "TN": 636030, + "TP": 6948, + "n_pred": 7996, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8699314443482533, + "FN": 3462, + "FP": 2097, + "IoU": 0.7698041326763013, + "TN": 540331, + "TP": 18590, + "n_pred": 20687, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7662706340027337, + "FN": 825, + "FP": 1398, + "IoU": 0.6211010738026248, + "TN": 558613, + "TP": 3644, + "n_pred": 5042, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9593983045445854, + "FN": 371, + "FP": 266, + "IoU": 0.9219649638613255, + "TN": 556317, + "TP": 7526, + "n_pred": 7792, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6923224937463921, + "FN": 1236, + "FP": 5160, + "IoU": 0.5294290759270159, + "TN": 550888, + "TP": 7196, + "n_pred": 12356, + "n_ref": 8432 + }, + "2": { + "Dice": 0.78411491339248, + "FN": 1151, + "FP": 893, + "IoU": 0.6448922863099374, + "TN": 558724, + "TP": 3712, + "n_pred": 4605, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8582539895400295, + "FN": 252, + "FP": 805, + "IoU": 0.7517030772844726, + "TN": 560223, + "TP": 3200, + "n_pred": 4005, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7332571428571428, + "FN": 2763, + "FP": 738, + "IoU": 0.5788523998556477, + "TN": 410567, + "TP": 4812, + "n_pred": 5550, + "n_ref": 7575 + }, + "2": { + "Dice": 0.5508425334108077, + "FN": 1434, + "FP": 885, + "IoU": 0.38011226944667204, + "TN": 415139, + "TP": 1422, + "n_pred": 2307, + "n_ref": 2856 + }, + "3": { + "Dice": 0.862550272060563, + "FN": 553, + "FP": 609, + "IoU": 0.7583194675540765, + "TN": 414072, + "TP": 3646, + "n_pred": 4255, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6416366383819598, + "FN": 1977, + "FP": 1106, + "IoU": 0.47236008899537907, + "TN": 413037, + "TP": 2760, + "n_pred": 3866, + "n_ref": 4737 + }, + "2": { + "Dice": 0.5269512721000431, + "FN": 1771, + "FP": 423, + "IoU": 0.35772833723653397, + "TN": 415464, + "TP": 1222, + "n_pred": 1645, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8416006669445603, + "FN": 364, + "FP": 396, + "IoU": 0.7265203310543361, + "TN": 416101, + "TP": 2019, + "n_pred": 2415, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9158222059630511, + "FN": 1049, + "FP": 1252, + "IoU": 0.8447158860844919, + "TN": 481692, + "TP": 12517, + "n_pred": 13769, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8424793275473246, + "FN": 1508, + "FP": 797, + "IoU": 0.7278309127405833, + "TN": 488041, + "TP": 6164, + "n_pred": 6961, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9586576496108205, + "FN": 259, + "FP": 389, + "IoU": 0.9205979659355471, + "TN": 488349, + "TP": 7513, + "n_pred": 7902, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8930171984525224, + "FN": 1605, + "FP": 1188, + "IoU": 0.806712802768166, + "TN": 482060, + "TP": 11657, + "n_pred": 12845, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8174922498515929, + "FN": 2279, + "FP": 488, + "IoU": 0.6913208389112003, + "TN": 487546, + "TP": 6197, + "n_pred": 6685, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8634280476626948, + "FN": 103, + "FP": 940, + "IoU": 0.7596774193548387, + "TN": 492170, + "TP": 3297, + "n_pred": 4237, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_004/summary_cross_val.json b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_004/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..0ac5f38ef8268901d5de37b6dc92a4d5f7303779 --- /dev/null +++ b/nnActive_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/loop_004/summary_cross_val.json @@ -0,0 +1,5064 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.6782644486811874, + "FN": 28.28395061728395, + "FP": 23.06172839506173, + "IoU": 0.6004786309105951, + "TN": 1578.5802469135804, + "TP": 147.85185185185185, + "n_pred": 170.9135802469136, + "n_ref": 176.1358024691358 + }, + "mean": { + "1": { + "Dice": 0.49522522835488114, + "FN": 36.074074074074076, + "FP": 34.925925925925924, + "IoU": 0.4015387956525238, + "TN": 1593.888888888889, + "TP": 112.88888888888889, + "n_pred": 147.8148148148148, + "n_ref": 148.96296296296296 + }, + "2": { + "Dice": 0.7182161520707917, + "FN": 41.03703703703704, + "FP": 18.296296296296298, + "IoU": 0.6331215241244527, + "TN": 1566.3703703703704, + "TP": 152.07407407407408, + "n_pred": 170.37037037037038, + "n_ref": 193.11111111111111 + }, + "3": { + "Dice": 0.8213519656178894, + "FN": 7.7407407407407405, + "FP": 15.962962962962964, + "IoU": 0.7667755729548086, + "TN": 1575.4814814814815, + "TP": 178.59259259259258, + "n_pred": 194.55555555555554, + "n_ref": 186.33333333333334 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 349, + "IoU": 0.0, + "TN": 1251, + "TP": 0, + "n_pred": 349, + "n_ref": 0 + }, + "2": { + "Dice": 0.8816568047337278, + "FN": 27, + "FP": 13, + "IoU": 0.7883597883597884, + "TN": 1411, + "TP": 149, + "n_pred": 162, + "n_ref": 176 + }, + "3": { + "Dice": 0.9714285714285714, + "FN": 11, + "FP": 0, + "IoU": 0.9444444444444444, + "TN": 1402, + "TP": 187, + "n_pred": 187, + "n_ref": 198 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 48, + "IoU": 0.0, + "TN": 1552, + "TP": 0, + "n_pred": 48, + "n_ref": 0 + }, + "2": { + "Dice": 0.5792349726775956, + "FN": 57, + "FP": 20, + "IoU": 0.4076923076923077, + "TN": 1470, + "TP": 53, + "n_pred": 73, + "n_ref": 110 + }, + "3": { + "Dice": 0.8763358778625954, + "FN": 75, + "FP": 6, + "IoU": 0.779891304347826, + "TN": 1232, + "TP": 287, + "n_pred": 293, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42857142857142855, + "FN": 16, + "FP": 0, + "IoU": 0.2727272727272727, + "TN": 778, + "TP": 6, + "n_pred": 6, + "n_ref": 22 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6542635658914728, + "FN": 223, + "FP": 0, + "IoU": 0.4861751152073733, + "TN": 1166, + "TP": 211, + "n_pred": 211, + "n_ref": 434 + }, + "2": { + "Dice": 0.8054607508532423, + "FN": 0, + "FP": 57, + "IoU": 0.6742857142857143, + "TN": 1425, + "TP": 118, + "n_pred": 175, + "n_ref": 118 + }, + "3": { + "Dice": 0.9090909090909091, + "FN": 2, + "FP": 0, + "IoU": 0.8333333333333334, + "TN": 1588, + "TP": 10, + "n_pred": 10, + "n_ref": 12 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8983957219251337, + "FN": 4, + "FP": 15, + "IoU": 0.8155339805825242, + "TN": 1497, + "TP": 84, + "n_pred": 99, + "n_ref": 88 + }, + "3": { + "Dice": 0.9936939926983074, + "FN": 15, + "FP": 4, + "IoU": 0.987467018469657, + "TN": 84, + "TP": 1497, + "n_pred": 1501, + "n_ref": 1512 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5007974481658692, + "FN": 57, + "FP": 256, + "IoU": 0.33404255319148934, + "TN": 4330, + "TP": 157, + "n_pred": 413, + "n_ref": 214 + }, + "2": { + "Dice": 0.8836023789294817, + "FN": 94, + "FP": 43, + "IoU": 0.791476407914764, + "TN": 4143, + "TP": 520, + "n_pred": 563, + "n_ref": 614 + }, + "3": { + "Dice": 0.9342403628117913, + "FN": 28, + "FP": 30, + "IoU": 0.8765957446808511, + "TN": 4330, + "TP": 412, + "n_pred": 442, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.825, + "FN": 28, + "FP": 0, + "IoU": 0.7021276595744681, + "TN": 1506, + "TP": 66, + "n_pred": 66, + "n_ref": 94 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8720173535791758, + "FN": 118, + "FP": 0, + "IoU": 0.7730769230769231, + "TN": 280, + "TP": 402, + "n_pred": 402, + "n_ref": 520 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8002883922134102, + "FN": 169, + "FP": 108, + "IoU": 0.6670673076923077, + "TN": 3168, + "TP": 555, + "n_pred": 663, + "n_ref": 724 + }, + "2": { + "Dice": 0.8863920099875156, + "FN": 17, + "FP": 74, + "IoU": 0.7959641255605381, + "TN": 3554, + "TP": 355, + "n_pred": 429, + "n_ref": 372 + }, + "3": { + "Dice": 0.984, + "FN": 17, + "FP": 11, + "IoU": 0.968503937007874, + "TN": 3111, + "TP": 861, + "n_pred": 872, + "n_ref": 878 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8846815834767642, + "FN": 49, + "FP": 18, + "IoU": 0.7932098765432098, + "TN": 476, + "TP": 257, + "n_pred": 275, + "n_ref": 306 + }, + "3": { + "Dice": 0.9454545454545454, + "FN": 18, + "FP": 0, + "IoU": 0.896551724137931, + "TN": 626, + "TP": 156, + "n_pred": 156, + "n_ref": 174 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9260700389105059, + "FN": 85, + "FP": 10, + "IoU": 0.8623188405797102, + "TN": 910, + "TP": 595, + "n_pred": 605, + "n_ref": 680 + }, + "3": { + "Dice": 0.9428571428571428, + "FN": 10, + "FP": 46, + "IoU": 0.8918918918918919, + "TN": 1082, + "TP": 462, + "n_pred": 508, + "n_ref": 472 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9325513196480938, + "FN": 26, + "FP": 20, + "IoU": 0.8736263736263736, + "TN": 436, + "TP": 318, + "n_pred": 338, + "n_ref": 344 + }, + "3": { + "Dice": 0.9194029850746268, + "FN": 8, + "FP": 19, + "IoU": 0.850828729281768, + "TN": 619, + "TP": 154, + "n_pred": 173, + "n_ref": 162 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.34408602150537637, + "FN": 0, + "FP": 61, + "IoU": 0.2077922077922078, + "TN": 3123, + "TP": 16, + "n_pred": 77, + "n_ref": 16 + }, + "2": { + "Dice": 0.9348722176422094, + "FN": 79, + "FP": 0, + "IoU": 0.8777089783281734, + "TN": 2554, + "TP": 567, + "n_pred": 567, + "n_ref": 646 + }, + "3": { + "Dice": 0.9387755102040817, + "FN": 0, + "FP": 18, + "IoU": 0.8846153846153846, + "TN": 3044, + "TP": 138, + "n_pred": 156, + "n_ref": 138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 53, + "IoU": 0.0, + "TN": 1547, + "TP": 0, + "n_pred": 53, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 55, + "IoU": 0.0, + "TN": 1545, + "TP": 0, + "n_pred": 55, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 49, + "IoU": 0.0, + "TN": 1551, + "TP": 0, + "n_pred": 49, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4, + "FN": 12, + "FP": 0, + "IoU": 0.25, + "TN": 2384, + "TP": 4, + "n_pred": 4, + "n_ref": 16 + }, + "2": { + "Dice": 0.56, + "FN": 9, + "FP": 2, + "IoU": 0.3888888888888889, + "TN": 2382, + "TP": 7, + "n_pred": 9, + "n_ref": 16 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7783251231527094, + "FN": 90, + "FP": 0, + "IoU": 0.6370967741935484, + "TN": 1352, + "TP": 158, + "n_pred": 158, + "n_ref": 248 + }, + "2": { + "Dice": 0.007575757575757576, + "FN": 524, + "FP": 0, + "IoU": 0.0038022813688212928, + "TN": 1074, + "TP": 2, + "n_pred": 2, + "n_ref": 526 + }, + "3": { + "Dice": 0.7931034482758621, + "FN": 0, + "FP": 24, + "IoU": 0.6571428571428571, + "TN": 1530, + "TP": 46, + "n_pred": 70, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7845303867403315, + "FN": 143, + "FP": 13, + "IoU": 0.6454545454545455, + "TN": 1960, + "TP": 284, + "n_pred": 297, + "n_ref": 427 + }, + "2": { + "Dice": 0.8295454545454546, + "FN": 28, + "FP": 2, + "IoU": 0.7087378640776699, + "TN": 2297, + "TP": 73, + "n_pred": 75, + "n_ref": 101 + }, + "3": { + "Dice": 0.8571428571428571, + "FN": 2, + "FP": 0, + "IoU": 0.75, + "TN": 2392, + "TP": 6, + "n_pred": 6, + "n_ref": 8 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient075_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient075_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 772, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + }, + "2": { + "Dice": 0.7750556792873051, + "FN": 28, + "FP": 73, + "IoU": 0.6327272727272727, + "TN": 525, + "TP": 174, + "n_pred": 247, + "n_ref": 202 + }, + "3": { + "Dice": 0.8923076923076924, + "FN": 0, + "FP": 28, + "IoU": 0.8055555555555556, + "TN": 656, + "TP": 116, + "n_pred": 144, + "n_ref": 116 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 174, + "IoU": 0.0, + "TN": 626, + "TP": 0, + "n_pred": 174, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9100169779286927, + "FN": 106, + "FP": 0, + "IoU": 0.8348909657320872, + "TN": 3358, + "TP": 536, + "n_pred": 536, + "n_ref": 642 + }, + "2": { + "Dice": 0.9151785714285714, + "FN": 17, + "FP": 21, + "IoU": 0.8436213991769548, + "TN": 3757, + "TP": 205, + "n_pred": 226, + "n_ref": 222 + }, + "3": { + "Dice": 0.9771986970684039, + "FN": 11, + "FP": 3, + "IoU": 0.9554140127388535, + "TN": 3686, + "TP": 300, + "n_pred": 303, + "n_ref": 311 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9554817275747508, + "FN": 40, + "FP": 27, + "IoU": 0.9147582697201018, + "TN": 814, + "TP": 719, + "n_pred": 746, + "n_ref": 759 + }, + "2": { + "Dice": 0.9102362204724409, + "FN": 30, + "FP": 27, + "IoU": 0.8352601156069365, + "TN": 1254, + "TP": 289, + "n_pred": 316, + "n_ref": 319 + }, + "3": { + "Dice": 0.9243027888446215, + "FN": 6, + "FP": 13, + "IoU": 0.8592592592592593, + "TN": 1465, + "TP": 116, + "n_pred": 129, + "n_ref": 122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9288135593220339, + "FN": 6, + "FP": 36, + "IoU": 0.8670886075949367, + "TN": 1284, + "TP": 274, + "n_pred": 310, + "n_ref": 280 + }, + "3": { + "Dice": 0.925, + "FN": 6, + "FP": 6, + "IoU": 0.8604651162790697, + "TN": 1514, + "TP": 74, + "n_pred": 80, + "n_ref": 80 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.6353712563410258, + "FN": 47.53086419753086, + "FP": 18.740740740740744, + "IoU": 0.566322774467484, + "TN": 1970.5432098765432, + "TP": 126.14814814814815, + "n_pred": 144.88888888888889, + "n_ref": 173.679012345679 + }, + "mean": { + "1": { + "Dice": 0.4342305181467396, + "FN": 81.11111111111111, + "FP": 30.40740740740741, + "IoU": 0.37732455542708554, + "TN": 1914.037037037037, + "TP": 137.40740740740742, + "n_pred": 167.8148148148148, + "n_ref": 218.5185185185185 + }, + "2": { + "Dice": 0.7155850345796456, + "FN": 49.851851851851855, + "FP": 15.703703703703704, + "IoU": 0.6320225569602647, + "TN": 1942.9259259259259, + "TP": 154.4814814814815, + "n_pred": 170.1851851851852, + "n_ref": 204.33333333333334 + }, + "3": { + "Dice": 0.7562982162966922, + "FN": 11.62962962962963, + "FP": 10.11111111111111, + "IoU": 0.6896212110151019, + "TN": 2054.6666666666665, + "TP": 86.55555555555556, + "n_pred": 96.66666666666667, + "n_ref": 98.18518518518519 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.855, + "FN": 169, + "FP": 5, + "IoU": 0.7467248908296943, + "TN": 913, + "TP": 513, + "n_pred": 518, + "n_ref": 682 + }, + "2": { + "Dice": 0.7647058823529411, + "FN": 2, + "FP": 14, + "IoU": 0.6190476190476191, + "TN": 1558, + "TP": 26, + "n_pred": 40, + "n_ref": 28 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 0, + "IoU": 0.0, + "TN": 1594, + "TP": 0, + "n_pred": 0, + "n_ref": 6 + }, + "2": { + "Dice": 0.9125248508946322, + "FN": 57, + "FP": 31, + "IoU": 0.8391224862888482, + "TN": 1053, + "TP": 459, + "n_pred": 490, + "n_ref": 516 + }, + "3": { + "Dice": 0.9536231884057971, + "FN": 23, + "FP": 9, + "IoU": 0.9113573407202216, + "TN": 1239, + "TP": 329, + "n_pred": 338, + "n_ref": 352 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8221225710014948, + "FN": 101, + "FP": 18, + "IoU": 0.6979695431472082, + "TN": 2806, + "TP": 275, + "n_pred": 293, + "n_ref": 376 + }, + "3": { + "Dice": 0.782608695652174, + "FN": 5, + "FP": 0, + "IoU": 0.6428571428571429, + "TN": 3186, + "TP": 9, + "n_pred": 9, + "n_ref": 14 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7012987012987013, + "FN": 46, + "FP": 0, + "IoU": 0.54, + "TN": 1500, + "TP": 54, + "n_pred": 54, + "n_ref": 100 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 3992, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "2": { + "Dice": 0.10385259631490787, + "FN": 531, + "FP": 4, + "IoU": 0.054770318021201414, + "TN": 3434, + "TP": 31, + "n_pred": 35, + "n_ref": 562 + }, + "3": { + "Dice": 0.860655737704918, + "FN": 9, + "FP": 25, + "IoU": 0.7553956834532374, + "TN": 3861, + "TP": 105, + "n_pred": 130, + "n_ref": 114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 10, + "FP": 0, + "IoU": 0.0, + "TN": 790, + "TP": 0, + "n_pred": 0, + "n_ref": 10 + }, + "2": { + "Dice": 0.9649122807017544, + "FN": 37, + "FP": 7, + "IoU": 0.9322033898305084, + "TN": 151, + "TP": 605, + "n_pred": 612, + "n_ref": 642 + }, + "3": { + "Dice": 0.9547038327526133, + "FN": 5, + "FP": 8, + "IoU": 0.9133333333333333, + "TN": 650, + "TP": 137, + "n_pred": 145, + "n_ref": 142 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 195, + "IoU": 0.0, + "TN": 1405, + "TP": 0, + "n_pred": 195, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 3994, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 72, + "IoU": 0.0, + "TN": 3928, + "TP": 0, + "n_pred": 72, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 81, + "IoU": 0.0, + "TN": 3919, + "TP": 0, + "n_pred": 81, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 233, + "IoU": 0.0, + "TN": 2967, + "TP": 0, + "n_pred": 233, + "n_ref": 0 + }, + "2": { + "Dice": 0.8886554621848739, + "FN": 71, + "FP": 141, + "IoU": 0.7996219281663516, + "TN": 2142, + "TP": 846, + "n_pred": 987, + "n_ref": 917 + }, + "3": { + "Dice": 0.8507157464212679, + "FN": 141, + "FP": 5, + "IoU": 0.7402135231316725, + "TN": 2638, + "TP": 416, + "n_pred": 421, + "n_ref": 557 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7720364741641338, + "FN": 72, + "FP": 3, + "IoU": 0.6287128712871287, + "TN": 598, + "TP": 127, + "n_pred": 130, + "n_ref": 199 + }, + "2": { + "Dice": 0.7904191616766467, + "FN": 44, + "FP": 26, + "IoU": 0.6534653465346535, + "TN": 598, + "TP": 132, + "n_pred": 158, + "n_ref": 176 + }, + "3": { + "Dice": 0.9197860962566845, + "FN": 10, + "FP": 5, + "IoU": 0.8514851485148515, + "TN": 699, + "TP": 86, + "n_pred": 91, + "n_ref": 96 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9121887287024901, + "FN": 60, + "FP": 7, + "IoU": 0.8385542168674699, + "TN": 1185, + "TP": 348, + "n_pred": 355, + "n_ref": 408 + }, + "3": { + "Dice": 0.9615384615384616, + "FN": 0, + "FP": 32, + "IoU": 0.9259259259259259, + "TN": 1168, + "TP": 400, + "n_pred": 432, + "n_ref": 400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7085201793721974, + "FN": 130, + "FP": 0, + "IoU": 0.5486111111111112, + "TN": 2112, + "TP": 158, + "n_pred": 158, + "n_ref": 288 + }, + "2": { + "Dice": 0.8229027962716379, + "FN": 122, + "FP": 11, + "IoU": 0.6990950226244343, + "TN": 1958, + "TP": 309, + "n_pred": 320, + "n_ref": 431 + }, + "3": { + "Dice": 0.9145228215767635, + "FN": 3, + "FP": 100, + "IoU": 0.8425076452599388, + "TN": 1746, + "TP": 551, + "n_pred": 651, + "n_ref": 554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 30, + "FP": 0, + "IoU": 0.0, + "TN": 3970, + "TP": 0, + "n_pred": 0, + "n_ref": 30 + }, + "2": { + "Dice": 0.8706952566601689, + "FN": 150, + "FP": 49, + "IoU": 0.7710011507479861, + "TN": 3131, + "TP": 670, + "n_pred": 719, + "n_ref": 820 + }, + "3": { + "Dice": 0.918918918918919, + "FN": 8, + "FP": 4, + "IoU": 0.85, + "TN": 3920, + "TP": 68, + "n_pred": 72, + "n_ref": 76 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9740680713128039, + "FN": 15, + "FP": 17, + "IoU": 0.9494470774091627, + "TN": 967, + "TP": 601, + "n_pred": 618, + "n_ref": 616 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.31108144192256343, + "FN": 907, + "FP": 125, + "IoU": 0.1841897233201581, + "TN": 1935, + "TP": 233, + "n_pred": 358, + "n_ref": 1140 + }, + "2": { + "Dice": 0.0, + "FN": 90, + "FP": 0, + "IoU": 0.0, + "TN": 3110, + "TP": 0, + "n_pred": 0, + "n_ref": 90 + }, + "3": { + "Dice": 0.0, + "FN": 95, + "FP": 0, + "IoU": 0.0, + "TN": 3105, + "TP": 0, + "n_pred": 0, + "n_ref": 95 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6126482213438735, + "FN": 392, + "FP": 0, + "IoU": 0.4415954415954416, + "TN": 1698, + "TP": 310, + "n_pred": 310, + "n_ref": 702 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9634146341463414, + "FN": 45, + "FP": 9, + "IoU": 0.9294117647058824, + "TN": 3235, + "TP": 711, + "n_pred": 720, + "n_ref": 756 + }, + "2": { + "Dice": 0.8617886178861789, + "FN": 17, + "FP": 0, + "IoU": 0.7571428571428571, + "TN": 3930, + "TP": 53, + "n_pred": 53, + "n_ref": 70 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 4000, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.934010152284264, + "FN": 7, + "FP": 6, + "IoU": 0.8761904761904762, + "TN": 3095, + "TP": 92, + "n_pred": 98, + "n_ref": 99 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 195, + "IoU": 0.0, + "TN": 2205, + "TP": 0, + "n_pred": 195, + "n_ref": 0 + }, + "2": { + "Dice": 0.9565217391304348, + "FN": 3, + "FP": 2, + "IoU": 0.9166666666666666, + "TN": 2340, + "TP": 55, + "n_pred": 57, + "n_ref": 58 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9512459371614301, + "FN": 29, + "FP": 16, + "IoU": 0.9070247933884298, + "TN": 316, + "TP": 439, + "n_pred": 455, + "n_ref": 468 + }, + "2": { + "Dice": 0.8705882352941177, + "FN": 4, + "FP": 7, + "IoU": 0.7708333333333334, + "TN": 752, + "TP": 37, + "n_pred": 44, + "n_ref": 41 + }, + "3": { + "Dice": 0.75, + "FN": 2, + "FP": 0, + "IoU": 0.6, + "TN": 795, + "TP": 3, + "n_pred": 3, + "n_ref": 5 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7341242149337055, + "FN": 378, + "FP": 3, + "IoU": 0.5799338478500551, + "TN": 1493, + "TP": 526, + "n_pred": 529, + "n_ref": 904 + }, + "2": { + "Dice": 0.9217687074829932, + "FN": 11, + "FP": 35, + "IoU": 0.8548895899053628, + "TN": 2083, + "TP": 271, + "n_pred": 306, + "n_ref": 282 + }, + "3": { + "Dice": 0.9648033126293996, + "FN": 13, + "FP": 4, + "IoU": 0.932, + "TN": 2150, + "TP": 233, + "n_pred": 237, + "n_ref": 246 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.7869127088907315, + "FN": 20.91358024691358, + "FP": 28.691358024691358, + "IoU": 0.7036193799836146, + "TN": 1435.493827160494, + "TP": 144.53086419753086, + "n_pred": 173.2222222222222, + "n_ref": 165.44444444444446 + }, + "mean": { + "1": { + "Dice": 0.668884363172058, + "FN": 36.629629629629626, + "FP": 35.77777777777778, + "IoU": 0.5828126442465653, + "TN": 1422.4074074074074, + "TP": 134.8148148148148, + "n_pred": 170.59259259259258, + "n_ref": 171.44444444444446 + }, + "2": { + "Dice": 0.784081091943785, + "FN": 19.22222222222222, + "FP": 37.22222222222222, + "IoU": 0.686271822782032, + "TN": 1457.851851851852, + "TP": 115.33333333333333, + "n_pred": 152.55555555555554, + "n_ref": 134.55555555555554 + }, + "3": { + "Dice": 0.9077726715563513, + "FN": 6.888888888888889, + "FP": 13.074074074074074, + "IoU": 0.8417736729222463, + "TN": 1426.2222222222222, + "TP": 183.44444444444446, + "n_pred": 196.5185185185185, + "n_ref": 190.33333333333334 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7774480712166172, + "FN": 52, + "FP": 23, + "IoU": 0.6359223300970874, + "TN": 2194, + "TP": 131, + "n_pred": 154, + "n_ref": 183 + }, + "2": { + "Dice": 0.8888888888888888, + "FN": 18, + "FP": 55, + "IoU": 0.8, + "TN": 2035, + "TP": 292, + "n_pred": 347, + "n_ref": 310 + }, + "3": { + "Dice": 0.983926521239954, + "FN": 27, + "FP": 1, + "IoU": 0.9683615819209039, + "TN": 1515, + "TP": 857, + "n_pred": 858, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.764609503003823, + "FN": 424, + "FP": 7, + "IoU": 0.618921308576481, + "TN": 1269, + "TP": 700, + "n_pred": 707, + "n_ref": 1124 + }, + "2": { + "Dice": 0.759075907590759, + "FN": 73, + "FP": 0, + "IoU": 0.6117021276595744, + "TN": 2212, + "TP": 115, + "n_pred": 115, + "n_ref": 188 + }, + "3": { + "Dice": 0.8805970149253731, + "FN": 0, + "FP": 32, + "IoU": 0.7866666666666666, + "TN": 2250, + "TP": 118, + "n_pred": 150, + "n_ref": 118 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.32085561497326204, + "FN": 72, + "FP": 55, + "IoU": 0.1910828025477707, + "TN": 1443, + "TP": 30, + "n_pred": 85, + "n_ref": 102 + }, + "2": { + "Dice": 0.6861642294713161, + "FN": 0, + "FP": 279, + "IoU": 0.5222602739726028, + "TN": 1016, + "TP": 305, + "n_pred": 584, + "n_ref": 305 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3889908256880734, + "FN": 18, + "FP": 315, + "IoU": 0.24145785876993167, + "TN": 1961, + "TP": 106, + "n_pred": 421, + "n_ref": 124 + }, + "2": { + "Dice": 0.8410041841004184, + "FN": 15, + "FP": 61, + "IoU": 0.7256317689530686, + "TN": 2123, + "TP": 201, + "n_pred": 262, + "n_ref": 216 + }, + "3": { + "Dice": 0.8175182481751825, + "FN": 4, + "FP": 71, + "IoU": 0.691358024691358, + "TN": 2157, + "TP": 168, + "n_pred": 239, + "n_ref": 172 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9414758269720102, + "FN": 69, + "FP": 0, + "IoU": 0.8894230769230769, + "TN": 2576, + "TP": 555, + "n_pred": 555, + "n_ref": 624 + }, + "2": { + "Dice": 0.9230769230769231, + "FN": 0, + "FP": 66, + "IoU": 0.8571428571428571, + "TN": 2738, + "TP": 396, + "n_pred": 462, + "n_ref": 396 + }, + "3": { + "Dice": 0.9221902017291066, + "FN": 54, + "FP": 0, + "IoU": 0.8556149732620321, + "TN": 2826, + "TP": 320, + "n_pred": 320, + "n_ref": 374 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9598893499308437, + "FN": 15, + "FP": 14, + "IoU": 0.9228723404255319, + "TN": 424, + "TP": 347, + "n_pred": 361, + "n_ref": 362 + }, + "2": { + "Dice": 0.8435374149659864, + "FN": 14, + "FP": 55, + "IoU": 0.7294117647058823, + "TN": 545, + "TP": 186, + "n_pred": 241, + "n_ref": 200 + }, + "3": { + "Dice": 0.908256880733945, + "FN": 40, + "FP": 0, + "IoU": 0.8319327731092437, + "TN": 562, + "TP": 198, + "n_pred": 198, + "n_ref": 238 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.986046511627907, + "FN": 8, + "FP": 1, + "IoU": 0.9724770642201835, + "TN": 2073, + "TP": 318, + "n_pred": 319, + "n_ref": 326 + }, + "2": { + "Dice": 0.3409090909090909, + "FN": 31, + "FP": 143, + "IoU": 0.2054794520547945, + "TN": 2181, + "TP": 45, + "n_pred": 188, + "n_ref": 76 + }, + "3": { + "Dice": 0.7769784172661871, + "FN": 0, + "FP": 31, + "IoU": 0.6352941176470588, + "TN": 2315, + "TP": 54, + "n_pred": 85, + "n_ref": 54 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7863247863247863, + "FN": 12, + "FP": 38, + "IoU": 0.647887323943662, + "TN": 1458, + "TP": 92, + "n_pred": 130, + "n_ref": 104 + }, + "2": { + "Dice": 0.9726315789473684, + "FN": 11, + "FP": 2, + "IoU": 0.9467213114754098, + "TN": 1356, + "TP": 231, + "n_pred": 233, + "n_ref": 242 + }, + "3": { + "Dice": 0.9952153110047847, + "FN": 0, + "FP": 5, + "IoU": 0.9904761904761905, + "TN": 1075, + "TP": 520, + "n_pred": 525, + "n_ref": 520 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.940677966101695, + "FN": 0, + "FP": 28, + "IoU": 0.888, + "TN": 1350, + "TP": 222, + "n_pred": 250, + "n_ref": 222 + }, + "2": { + "Dice": 0.9391727493917275, + "FN": 15, + "FP": 10, + "IoU": 0.8853211009174312, + "TN": 1382, + "TP": 193, + "n_pred": 203, + "n_ref": 208 + }, + "3": { + "Dice": 0.9804772234273319, + "FN": 4, + "FP": 14, + "IoU": 0.9617021276595744, + "TN": 1130, + "TP": 452, + "n_pred": 466, + "n_ref": 456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8801742919389978, + "FN": 110, + "FP": 0, + "IoU": 0.7859922178988327, + "TN": 1086, + "TP": 404, + "n_pred": 404, + "n_ref": 514 + }, + "2": { + "Dice": 0.12280701754385964, + "FN": 125, + "FP": 175, + "IoU": 0.06542056074766354, + "TN": 1279, + "TP": 21, + "n_pred": 196, + "n_ref": 146 + }, + "3": { + "Dice": 0.7123287671232876, + "FN": 0, + "FP": 126, + "IoU": 0.5531914893617021, + "TN": 1318, + "TP": 156, + "n_pred": 282, + "n_ref": 156 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9128440366972477, + "FN": 7, + "FP": 31, + "IoU": 0.8396624472573839, + "TN": 1363, + "TP": 199, + "n_pred": 230, + "n_ref": 206 + }, + "3": { + "Dice": 0.9720812182741116, + "FN": 17, + "FP": 5, + "IoU": 0.945679012345679, + "TN": 1195, + "TP": 383, + "n_pred": 388, + "n_ref": 400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8770491803278688, + "FN": 11, + "FP": 19, + "IoU": 0.781021897810219, + "TN": 2263, + "TP": 107, + "n_pred": 126, + "n_ref": 118 + }, + "3": { + "Dice": 0.8316831683168316, + "FN": 17, + "FP": 0, + "IoU": 0.711864406779661, + "TN": 2341, + "TP": 42, + "n_pred": 42, + "n_ref": 59 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7547169811320755, + "FN": 2, + "FP": 37, + "IoU": 0.6060606060606061, + "TN": 2301, + "TP": 60, + "n_pred": 97, + "n_ref": 62 + }, + "2": { + "Dice": 0.9325153374233128, + "FN": 20, + "FP": 2, + "IoU": 0.8735632183908046, + "TN": 2226, + "TP": 152, + "n_pred": 154, + "n_ref": 172 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7040816326530612, + "FN": 98, + "FP": 18, + "IoU": 0.5433070866141733, + "TN": 546, + "TP": 138, + "n_pred": 156, + "n_ref": 236 + }, + "3": { + "Dice": 0.9724047306176085, + "FN": 18, + "FP": 3, + "IoU": 0.9462915601023018, + "TN": 409, + "TP": 370, + "n_pred": 373, + "n_ref": 388 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 0, + "TP": 800, + "n_pred": 800, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.879045996592845, + "FN": 58, + "FP": 13, + "IoU": 0.78419452887538, + "TN": 471, + "TP": 258, + "n_pred": 271, + "n_ref": 316 + }, + "3": { + "Dice": 0.8935281837160751, + "FN": 0, + "FP": 51, + "IoU": 0.8075471698113208, + "TN": 535, + "TP": 214, + "n_pred": 265, + "n_ref": 214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 83, + "IoU": 0.0, + "TN": 3117, + "TP": 0, + "n_pred": 83, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8631713554987213, + "FN": 207, + "FP": 7, + "IoU": 0.7592800899887514, + "TN": 711, + "TP": 675, + "n_pred": 682, + "n_ref": 882 + }, + "2": { + "Dice": 0.8, + "FN": 14, + "FP": 58, + "IoU": 0.6666666666666666, + "TN": 1384, + "TP": 144, + "n_pred": 202, + "n_ref": 158 + }, + "3": { + "Dice": 0.9694041867954911, + "FN": 5, + "FP": 14, + "IoU": 0.940625, + "TN": 1280, + "TP": 301, + "n_pred": 315, + "n_ref": 306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 358, + "IoU": 0.0, + "TN": 1242, + "TP": 0, + "n_pred": 358, + "n_ref": 0 + }, + "2": { + "Dice": 0.9065743944636678, + "FN": 9, + "FP": 18, + "IoU": 0.8291139240506329, + "TN": 1442, + "TP": 131, + "n_pred": 149, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.6606087591793663, + "FN": 32.37179487179487, + "FP": 46.602564102564095, + "IoU": 0.5741301630696719, + "TN": 1565.8333333333333, + "TP": 139.8076923076923, + "n_pred": 186.41025641025644, + "n_ref": 172.17948717948718 + }, + "mean": { + "1": { + "Dice": 0.4647508151729533, + "FN": 31.576923076923077, + "FP": 42.19230769230769, + "IoU": 0.4000939864254253, + "TN": 1608.5, + "TP": 102.34615384615384, + "n_pred": 144.53846153846155, + "n_ref": 133.92307692307693 + }, + "2": { + "Dice": 0.7113956018408926, + "FN": 36.0, + "FP": 54.65384615384615, + "IoU": 0.5949675508666246, + "TN": 1557.8461538461538, + "TP": 136.1153846153846, + "n_pred": 190.76923076923077, + "n_ref": 172.1153846153846 + }, + "3": { + "Dice": 0.8056798605242531, + "FN": 29.53846153846154, + "FP": 42.96153846153846, + "IoU": 0.727328951916966, + "TN": 1531.1538461538462, + "TP": 180.96153846153845, + "n_pred": 223.92307692307693, + "n_ref": 210.5 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 4000, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5435244161358811, + "FN": 66, + "FP": 149, + "IoU": 0.37317784256559766, + "TN": 3657, + "TP": 128, + "n_pred": 277, + "n_ref": 194 + }, + "3": { + "Dice": 0.6207650273224044, + "FN": 0, + "FP": 694, + "IoU": 0.4500792393026941, + "TN": 2738, + "TP": 568, + "n_pred": 1262, + "n_ref": 568 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 542, + "IoU": 0.0, + "TN": 1858, + "TP": 0, + "n_pred": 542, + "n_ref": 0 + }, + "2": { + "Dice": 0.772093023255814, + "FN": 57, + "FP": 90, + "IoU": 0.6287878787878788, + "TN": 2004, + "TP": 249, + "n_pred": 339, + "n_ref": 306 + }, + "3": { + "Dice": 0.9366272824919442, + "FN": 12, + "FP": 47, + "IoU": 0.8808080808080808, + "TN": 1905, + "TP": 436, + "n_pred": 483, + "n_ref": 448 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 12, + "IoU": 0.0, + "TN": 3988, + "TP": 0, + "n_pred": 12, + "n_ref": 0 + }, + "2": { + "Dice": 0.6192733017377567, + "FN": 344, + "FP": 138, + "IoU": 0.448512585812357, + "TN": 3126, + "TP": 392, + "n_pred": 530, + "n_ref": 736 + }, + "3": { + "Dice": 0.7585380467345716, + "FN": 399, + "FP": 4, + "IoU": 0.611003861003861, + "TN": 2964, + "TP": 633, + "n_pred": 637, + "n_ref": 1032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8229665071770335, + "FN": 0, + "FP": 37, + "IoU": 0.6991869918699187, + "TN": 677, + "TP": 86, + "n_pred": 123, + "n_ref": 86 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7811320754716982, + "FN": 3, + "FP": 113, + "IoU": 0.6408668730650154, + "TN": 477, + "TP": 207, + "n_pred": 320, + "n_ref": 210 + }, + "3": { + "Dice": 0.8635097493036211, + "FN": 96, + "FP": 2, + "IoU": 0.7598039215686274, + "TN": 392, + "TP": 310, + "n_pred": 312, + "n_ref": 406 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 3, + "FP": 0, + "IoU": 0.0, + "TN": 1597, + "TP": 0, + "n_pred": 0, + "n_ref": 3 + }, + "2": { + "Dice": 0.9033078880407125, + "FN": 11, + "FP": 65, + "IoU": 0.8236658932714617, + "TN": 1169, + "TP": 355, + "n_pred": 420, + "n_ref": 366 + }, + "3": { + "Dice": 0.9558823529411765, + "FN": 19, + "FP": 11, + "IoU": 0.9154929577464789, + "TN": 1245, + "TP": 325, + "n_pred": 336, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9409660107334525, + "FN": 5, + "FP": 28, + "IoU": 0.8885135135135135, + "TN": 1304, + "TP": 263, + "n_pred": 291, + "n_ref": 268 + }, + "3": { + "Dice": 0.981021897810219, + "FN": 8, + "FP": 5, + "IoU": 0.9627507163323782, + "TN": 1251, + "TP": 336, + "n_pred": 341, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6727688787185355, + "FN": 85, + "FP": 58, + "IoU": 0.506896551724138, + "TN": 2910, + "TP": 147, + "n_pred": 205, + "n_ref": 232 + }, + "2": { + "Dice": 0.9346314325452016, + "FN": 24, + "FP": 23, + "IoU": 0.8772845953002611, + "TN": 2817, + "TP": 336, + "n_pred": 359, + "n_ref": 360 + }, + "3": { + "Dice": 0.92, + "FN": 0, + "FP": 24, + "IoU": 0.8518518518518519, + "TN": 3038, + "TP": 138, + "n_pred": 162, + "n_ref": 138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.922552362396493, + "FN": 125, + "FP": 34, + "IoU": 0.85623869801085, + "TN": 2094, + "TP": 947, + "n_pred": 981, + "n_ref": 1072 + }, + "2": { + "Dice": 0.9103869653767821, + "FN": 53, + "FP": 35, + "IoU": 0.8355140186915888, + "TN": 2665, + "TP": 447, + "n_pred": 482, + "n_ref": 500 + }, + "3": { + "Dice": 0.934010152284264, + "FN": 14, + "FP": 12, + "IoU": 0.8761904761904762, + "TN": 2990, + "TP": 184, + "n_pred": 196, + "n_ref": 198 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7685393258426966, + "FN": 33, + "FP": 70, + "IoU": 0.6240875912408759, + "TN": 1326, + "TP": 171, + "n_pred": 241, + "n_ref": 204 + }, + "3": { + "Dice": 0.9340866290018832, + "FN": 70, + "FP": 0, + "IoU": 0.8763250883392226, + "TN": 1034, + "TP": 496, + "n_pred": 496, + "n_ref": 566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 789, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 294, + "IoU": 0.0, + "TN": 506, + "TP": 0, + "n_pred": 294, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 209, + "IoU": 0.0, + "TN": 591, + "TP": 0, + "n_pred": 209, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 44, + "IoU": 0.0, + "TN": 3156, + "TP": 0, + "n_pred": 44, + "n_ref": 0 + }, + "2": { + "Dice": 0.8359788359788359, + "FN": 28, + "FP": 96, + "IoU": 0.7181818181818181, + "TN": 2760, + "TP": 316, + "n_pred": 412, + "n_ref": 344 + }, + "3": { + "Dice": 0.975609756097561, + "FN": 22, + "FP": 17, + "IoU": 0.9523809523809523, + "TN": 2381, + "TP": 780, + "n_pred": 797, + "n_ref": 802 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7673956262425448, + "FN": 79, + "FP": 38, + "IoU": 0.6225806451612903, + "TN": 2090, + "TP": 193, + "n_pred": 231, + "n_ref": 272 + }, + "2": { + "Dice": 0.41346153846153844, + "FN": 44, + "FP": 200, + "IoU": 0.2606060606060606, + "TN": 2070, + "TP": 86, + "n_pred": 286, + "n_ref": 130 + }, + "3": { + "Dice": 0.5614035087719298, + "FN": 52, + "FP": 23, + "IoU": 0.3902439024390244, + "TN": 2277, + "TP": 48, + "n_pred": 71, + "n_ref": 100 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 258, + "IoU": 0.0, + "TN": 1342, + "TP": 0, + "n_pred": 258, + "n_ref": 0 + }, + "2": { + "Dice": 0.5786163522012578, + "FN": 50, + "FP": 17, + "IoU": 0.40707964601769914, + "TN": 1487, + "TP": 46, + "n_pred": 63, + "n_ref": 96 + }, + "3": { + "Dice": 0.8105263157894737, + "FN": 72, + "FP": 0, + "IoU": 0.6814159292035398, + "TN": 1374, + "TP": 154, + "n_pred": 154, + "n_ref": 226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9346341463414635, + "FN": 67, + "FP": 0, + "IoU": 0.8772893772893773, + "TN": 254, + "TP": 479, + "n_pred": 479, + "n_ref": 546 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9607843137254902, + "FN": 3, + "FP": 17, + "IoU": 0.9245283018867925, + "TN": 535, + "TP": 245, + "n_pred": 262, + "n_ref": 248 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.775047258979206, + "FN": 74, + "FP": 45, + "IoU": 0.6327160493827161, + "TN": 2876, + "TP": 205, + "n_pred": 250, + "n_ref": 279 + }, + "2": { + "Dice": 0.8066825775656324, + "FN": 149, + "FP": 13, + "IoU": 0.676, + "TN": 2700, + "TP": 338, + "n_pred": 351, + "n_ref": 487 + }, + "3": { + "Dice": 0.9714285714285714, + "FN": 4, + "FP": 1, + "IoU": 0.9444444444444444, + "TN": 3110, + "TP": 85, + "n_pred": 86, + "n_ref": 89 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6927835051546392, + "FN": 68, + "FP": 81, + "IoU": 0.5299684542586751, + "TN": 483, + "TP": 168, + "n_pred": 249, + "n_ref": 236 + }, + "3": { + "Dice": 0.8617886178861789, + "FN": 0, + "FP": 68, + "IoU": 0.7571428571428571, + "TN": 520, + "TP": 212, + "n_pred": 280, + "n_ref": 212 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6503623188405797, + "FN": 385, + "FP": 1, + "IoU": 0.4818791946308725, + "TN": 55, + "TP": 359, + "n_pred": 360, + "n_ref": 744 + }, + "2": { + "Dice": 0.8809523809523809, + "FN": 1, + "FP": 9, + "IoU": 0.7872340425531915, + "TN": 753, + "TP": 37, + "n_pred": 46, + "n_ref": 38 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.6855209226894274, + "FN": 30.115384615384613, + "FP": 32.32051282051282, + "IoU": 0.6004186707770517, + "TN": 1487.2051282051282, + "TP": 111.89743589743591, + "n_pred": 144.2179487179487, + "n_ref": 142.01282051282053 + }, + "mean": { + "1": { + "Dice": 0.558448082242893, + "FN": 19.46153846153846, + "FP": 63.92307692307692, + "IoU": 0.4812987917885556, + "TN": 1487.5, + "TP": 90.65384615384616, + "n_pred": 154.57692307692307, + "n_ref": 110.11538461538461 + }, + "2": { + "Dice": 0.679893266099365, + "FN": 50.76923076923077, + "FP": 24.192307692307693, + "IoU": 0.5687403156150651, + "TN": 1478.6923076923076, + "TP": 107.88461538461539, + "n_pred": 132.07692307692307, + "n_ref": 158.65384615384616 + }, + "3": { + "Dice": 0.8182214197260247, + "FN": 20.115384615384617, + "FP": 8.846153846153847, + "IoU": 0.7512169049275347, + "TN": 1495.423076923077, + "TP": 137.15384615384616, + "n_pred": 146.0, + "n_ref": 157.26923076923077 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.4, + "FN": 0, + "FP": 18, + "IoU": 0.25, + "TN": 1576, + "TP": 6, + "n_pred": 24, + "n_ref": 6 + }, + "2": { + "Dice": 0.8109965635738832, + "FN": 18, + "FP": 37, + "IoU": 0.6820809248554913, + "TN": 1427, + "TP": 118, + "n_pred": 155, + "n_ref": 136 + }, + "3": { + "Dice": 0.9710711493354183, + "FN": 37, + "FP": 0, + "IoU": 0.9437689969604863, + "TN": 942, + "TP": 621, + "n_pred": 621, + "n_ref": 658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1878453038674033, + "FN": 147, + "FP": 0, + "IoU": 0.10365853658536585, + "TN": 1436, + "TP": 17, + "n_pred": 17, + "n_ref": 164 + }, + "2": { + "Dice": 0.2518518518518518, + "FN": 116, + "FP": 86, + "IoU": 0.1440677966101695, + "TN": 1364, + "TP": 34, + "n_pred": 120, + "n_ref": 150 + }, + "3": { + "Dice": 0.8137432188065099, + "FN": 103, + "FP": 0, + "IoU": 0.6859756097560976, + "TN": 1272, + "TP": 225, + "n_pred": 225, + "n_ref": 328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.4868421052631579, + "FN": 154, + "FP": 2, + "IoU": 0.3217391304347826, + "TN": 2970, + "TP": 74, + "n_pred": 76, + "n_ref": 228 + }, + "3": { + "Dice": 0.9828850855745721, + "FN": 17, + "FP": 4, + "IoU": 0.9663461538461539, + "TN": 2576, + "TP": 603, + "n_pred": 607, + "n_ref": 620 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7603305785123967, + "FN": 8, + "FP": 21, + "IoU": 0.6133333333333333, + "TN": 725, + "TP": 46, + "n_pred": 67, + "n_ref": 54 + }, + "3": { + "Dice": 0.968944099378882, + "FN": 0, + "FP": 5, + "IoU": 0.9397590361445783, + "TN": 717, + "TP": 78, + "n_pred": 83, + "n_ref": 78 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8823529411764706, + "FN": 8, + "FP": 0, + "IoU": 0.7894736842105263, + "TN": 762, + "TP": 30, + "n_pred": 30, + "n_ref": 38 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7688679245283019, + "FN": 53, + "FP": 45, + "IoU": 0.6245210727969349, + "TN": 1339, + "TP": 163, + "n_pred": 208, + "n_ref": 216 + }, + "3": { + "Dice": 0.9325337331334332, + "FN": 45, + "FP": 0, + "IoU": 0.8735955056179775, + "TN": 1244, + "TP": 311, + "n_pred": 311, + "n_ref": 356 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9650145772594753, + "FN": 7, + "FP": 17, + "IoU": 0.9323943661971831, + "TN": 2845, + "TP": 331, + "n_pred": 348, + "n_ref": 338 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.738255033557047, + "FN": 68, + "FP": 10, + "IoU": 0.5851063829787234, + "TN": 2212, + "TP": 110, + "n_pred": 120, + "n_ref": 178 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 62, + "IoU": 0.0, + "TN": 2338, + "TP": 0, + "n_pred": 62, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6778290993071594, + "FN": 503, + "FP": 55, + "IoU": 0.5126637554585153, + "TN": 455, + "TP": 587, + "n_pred": 642, + "n_ref": 1090 + }, + "3": { + "Dice": 0.7509986684420772, + "FN": 92, + "FP": 95, + "IoU": 0.6012793176972282, + "TN": 1131, + "TP": 282, + "n_pred": 377, + "n_ref": 374 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9642596644784829, + "FN": 15, + "FP": 34, + "IoU": 0.9309859154929577, + "TN": 890, + "TP": 661, + "n_pred": 695, + "n_ref": 676 + }, + "2": { + "Dice": 0.7564102564102564, + "FN": 69, + "FP": 45, + "IoU": 0.6082474226804123, + "TN": 1309, + "TP": 177, + "n_pred": 222, + "n_ref": 246 + }, + "3": { + "Dice": 0.8376068376068376, + "FN": 45, + "FP": 12, + "IoU": 0.7205882352941176, + "TN": 1396, + "TP": 147, + "n_pred": 159, + "n_ref": 192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.942643391521197, + "FN": 21, + "FP": 2, + "IoU": 0.8915094339622641, + "TN": 588, + "TP": 189, + "n_pred": 191, + "n_ref": 210 + }, + "2": { + "Dice": 0.933920704845815, + "FN": 2, + "FP": 28, + "IoU": 0.8760330578512396, + "TN": 558, + "TP": 212, + "n_pred": 240, + "n_ref": 214 + }, + "3": { + "Dice": 0.9637681159420289, + "FN": 20, + "FP": 0, + "IoU": 0.9300699300699301, + "TN": 514, + "TP": 266, + "n_pred": 266, + "n_ref": 286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7973856209150327, + "FN": 0, + "FP": 186, + "IoU": 0.6630434782608695, + "TN": 248, + "TP": 366, + "n_pred": 552, + "n_ref": 366 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7472527472527473, + "FN": 5, + "FP": 18, + "IoU": 0.5964912280701754, + "TN": 2343, + "TP": 34, + "n_pred": 52, + "n_ref": 39 + }, + "2": { + "Dice": 0.9036144578313253, + "FN": 11, + "FP": 37, + "IoU": 0.8241758241758241, + "TN": 2127, + "TP": 225, + "n_pred": 262, + "n_ref": 236 + }, + "3": { + "Dice": 0.9643835616438357, + "FN": 26, + "FP": 0, + "IoU": 0.9312169312169312, + "TN": 2022, + "TP": 352, + "n_pred": 352, + "n_ref": 378 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6956521739130435, + "FN": 92, + "FP": 55, + "IoU": 0.5333333333333333, + "TN": 485, + "TP": 168, + "n_pred": 223, + "n_ref": 260 + }, + "3": { + "Dice": 0.900355871886121, + "FN": 55, + "FP": 1, + "IoU": 0.8187702265372169, + "TN": 491, + "TP": 253, + "n_pred": 254, + "n_ref": 308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8108108108108109, + "FN": 3, + "FP": 4, + "IoU": 0.6818181818181818, + "TN": 2378, + "TP": 15, + "n_pred": 19, + "n_ref": 18 + }, + "2": { + "Dice": 0.7714285714285715, + "FN": 75, + "FP": 101, + "IoU": 0.627906976744186, + "TN": 1927, + "TP": 297, + "n_pred": 398, + "n_ref": 372 + }, + "3": { + "Dice": 0.9267515923566879, + "FN": 17, + "FP": 29, + "IoU": 0.8635014836795252, + "TN": 2063, + "TP": 291, + "n_pred": 320, + "n_ref": 308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 486, + "IoU": 0.0, + "TN": 1114, + "TP": 0, + "n_pred": 486, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 1590, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5277777777777778, + "FN": 200, + "FP": 4, + "IoU": 0.3584905660377358, + "TN": 2882, + "TP": 114, + "n_pred": 118, + "n_ref": 314 + }, + "2": { + "Dice": 0.226890756302521, + "FN": 121, + "FP": 63, + "IoU": 0.12796208530805686, + "TN": 2989, + "TP": 27, + "n_pred": 90, + "n_ref": 148 + }, + "3": { + "Dice": 0.4805194805194805, + "FN": 65, + "FP": 15, + "IoU": 0.3162393162393162, + "TN": 3083, + "TP": 37, + "n_pred": 52, + "n_ref": 102 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9064486830154405, + "FN": 103, + "FP": 0, + "IoU": 0.8289036544850499, + "TN": 998, + "TP": 499, + "n_pred": 499, + "n_ref": 602 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 572, + "IoU": 0.0, + "TN": 228, + "TP": 0, + "n_pred": 572, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9754010695187165, + "FN": 12, + "FP": 11, + "IoU": 0.9519832985386222, + "TN": 1121, + "TP": 456, + "n_pred": 467, + "n_ref": 468 + }, + "2": { + "Dice": 0.9279279279279279, + "FN": 15, + "FP": 17, + "IoU": 0.865546218487395, + "TN": 1362, + "TP": 206, + "n_pred": 223, + "n_ref": 221 + }, + "3": { + "Dice": 0.9615384615384616, + "FN": 1, + "FP": 7, + "IoU": 0.9259259259259259, + "TN": 1492, + "TP": 100, + "n_pred": 107, + "n_ref": 101 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 327, + "IoU": 0.0, + "TN": 473, + "TP": 0, + "n_pred": 327, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859141/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset333_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-power_pe__seed-12345/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.6893356191563477, + "FN": 31.843114909781576, + "FP": 29.88338081671415, + "IoU": 0.6089939238416834, + "TN": 1607.5311490978158, + "TP": 134.0471984805318, + "n_pred": 163.93057929724597, + "n_ref": 165.8903133903134 + }, + "mean": { + "1": { + "Dice": 0.524307801417905, + "FN": 40.970655270655264, + "FP": 41.445299145299145, + "IoU": 0.4486137547080311, + "TN": 1605.2666666666669, + "TP": 115.62222222222222, + "n_pred": 157.06752136752135, + "n_ref": 156.59287749287748 + }, + "2": { + "Dice": 0.721834229306896, + "FN": 39.376068376068375, + "FP": 30.01367521367522, + "IoU": 0.6230247540696878, + "TN": 1600.737321937322, + "TP": 133.17777777777775, + "n_pred": 163.191452991453, + "n_ref": 172.55384615384617 + }, + "3": { + "Dice": 0.8218648267442422, + "FN": 15.182621082621083, + "FP": 18.191168091168088, + "IoU": 0.7553432627473315, + "TN": 1616.5894586894588, + "TP": 153.34159544159544, + "n_pred": 171.53276353276354, + "n_ref": 168.52421652421654 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_000/summary.json b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_000/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..73bbab8047c751c0f7c1b6d7123ff9d6801dd477 --- /dev/null +++ b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_000/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.6702179438673053, + "FN": 2543.273333333333, + "FP": 4118.306666666666, + "IoU": 0.5320997580348286, + "TN": 840116.2200000001, + "TP": 7650.84, + "n_pred": 11769.146666666667, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.5623310359038993, + "FN": 3426.1, + "FP": 5586.94, + "IoU": 0.4116915479135191, + "TN": 838987.64, + "TP": 6427.96, + "n_pred": 12014.9, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.641355863184424, + "FN": 2972.48, + "FP": 4555.84, + "IoU": 0.48792651024874545, + "TN": 839817.3, + "TP": 7083.02, + "n_pred": 11638.86, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8069669325135926, + "FN": 1231.24, + "FP": 2212.14, + "IoU": 0.6966812159422211, + "TN": 841543.72, + "TP": 9441.54, + "n_pred": 11653.68, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.5572512984418697, + "FN": 4472, + "FP": 6610, + "IoU": 0.3862428001772264, + "TN": 1087864, + "TP": 6974, + "n_pred": 13584, + "n_ref": 11446 + }, + "2": { + "Dice": 0.6941103533787972, + "FN": 2260, + "FP": 7608, + "IoU": 0.5315229775921003, + "TN": 1084856, + "TP": 11196, + "n_pred": 18804, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9296155817529472, + "FN": 1537, + "FP": 1896, + "IoU": 0.8684875881091021, + "TN": 1079816, + "TP": 22671, + "n_pred": 24567, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.46694610778443113, + "FN": 979, + "FP": 7923, + "IoU": 0.30458557925162094, + "TN": 1093119, + "TP": 3899, + "n_pred": 11822, + "n_ref": 4878 + }, + "2": { + "Dice": 0.6889281440537922, + "FN": 3890, + "FP": 7028, + "IoU": 0.5254694019471489, + "TN": 1082912, + "TP": 12090, + "n_pred": 19118, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9059968911069296, + "FN": 1871, + "FP": 1576, + "IoU": 0.8281483697277894, + "TN": 1085862, + "TP": 16611, + "n_pred": 18187, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.46824928509827063, + "FN": 3712, + "FP": 8003, + "IoU": 0.3056954898358324, + "TN": 892567, + "TP": 5158, + "n_pred": 13161, + "n_ref": 8870 + }, + "2": { + "Dice": 0.7777735920135619, + "FN": 3463, + "FP": 2436, + "IoU": 0.6363580323018123, + "TN": 893218, + "TP": 10323, + "n_pred": 12759, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9281934622422234, + "FN": 2643, + "FP": 261, + "IoU": 0.8660083975453329, + "TN": 887767, + "TP": 18769, + "n_pred": 19030, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.36349111244258037, + "FN": 3338, + "FP": 9410, + "IoU": 0.22211374176226506, + "TN": 893052, + "TP": 3640, + "n_pred": 13050, + "n_ref": 6978 + }, + "2": { + "Dice": 0.7763527631673752, + "FN": 3549, + "FP": 2659, + "IoU": 0.6344579873991639, + "TN": 892457, + "TP": 10775, + "n_pred": 13434, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9281023454157783, + "FN": 2311, + "FP": 218, + "IoU": 0.8658497772119669, + "TN": 890588, + "TP": 16323, + "n_pred": 16541, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7069615787040416, + "FN": 9651, + "FP": 2392, + "IoU": 0.5467444486262703, + "TN": 1399190, + "TP": 14527, + "n_pred": 16919, + "n_ref": 24178 + }, + "2": { + "Dice": 0.7484188334504568, + "FN": 3369, + "FP": 4507, + "IoU": 0.5979786636720943, + "TN": 1406169, + "TP": 11715, + "n_pred": 16222, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9245117676514772, + "FN": 3121, + "FP": 497, + "IoU": 0.8596205331160517, + "TN": 1399987, + "TP": 22155, + "n_pred": 22652, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7134890205646567, + "FN": 5268, + "FP": 4596, + "IoU": 0.5545922514223788, + "TN": 1403614, + "TP": 12282, + "n_pred": 16878, + "n_ref": 17550 + }, + "2": { + "Dice": 0.7490481135340948, + "FN": 3166, + "FP": 4809, + "IoU": 0.5987825124515772, + "TN": 1405883, + "TP": 11902, + "n_pred": 16711, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9121285670523364, + "FN": 3346, + "FP": 383, + "IoU": 0.8384525408309145, + "TN": 1402677, + "TP": 19354, + "n_pred": 19737, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6754484605087014, + "FN": 2951, + "FP": 3110, + "IoU": 0.5099450194049159, + "TN": 749680, + "TP": 6307, + "n_pred": 9417, + "n_ref": 9258 + }, + "2": { + "Dice": 0.7247789207724238, + "FN": 1378, + "FP": 4722, + "IoU": 0.568355505236343, + "TN": 747916, + "TP": 8032, + "n_pred": 12754, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9416390219928739, + "FN": 688, + "FP": 1212, + "IoU": 0.8897144183886696, + "TN": 744820, + "TP": 15328, + "n_pred": 16540, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4854382525903108, + "FN": 1451, + "FP": 5899, + "IoU": 0.32051400573171857, + "TN": 751231, + "TP": 3467, + "n_pred": 9366, + "n_ref": 4918 + }, + "2": { + "Dice": 0.7208350388866148, + "FN": 2433, + "FP": 4387, + "IoU": 0.56352, + "TN": 746423, + "TP": 8805, + "n_pred": 13192, + "n_ref": 11238 + }, + "3": { + "Dice": 0.89428208386277, + "FN": 1355, + "FP": 1141, + "IoU": 0.808779590898644, + "TN": 748995, + "TP": 10557, + "n_pred": 11698, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4470712773465067, + "FN": 8776, + "FP": 3760, + "IoU": 0.28788911610997503, + "TN": 1060668, + "TP": 5068, + "n_pred": 8828, + "n_ref": 13844 + }, + "2": { + "Dice": 0.558440366972477, + "FN": 3783, + "FP": 5843, + "IoU": 0.3873862406924203, + "TN": 1062559, + "TP": 6087, + "n_pred": 11930, + "n_ref": 9870 + }, + "3": { + "Dice": 0.739954233409611, + "FN": 6278, + "FP": 2245, + "IoU": 0.5872439343309603, + "TN": 1057623, + "TP": 12126, + "n_pred": 14371, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49353189597688374, + "FN": 7745, + "FP": 3648, + "IoU": 0.32760859301227574, + "TN": 1061328, + "TP": 5551, + "n_pred": 9199, + "n_ref": 13296 + }, + "2": { + "Dice": 0.5967529219155032, + "FN": 4239, + "FP": 4628, + "IoU": 0.4252657505833549, + "TN": 1062844, + "TP": 6561, + "n_pred": 11189, + "n_ref": 10800 + }, + "3": { + "Dice": 0.7612833453496756, + "FN": 4667, + "FP": 1955, + "IoU": 0.6145742389849252, + "TN": 1061091, + "TP": 10559, + "n_pred": 12514, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.38111634650235593, + "FN": 4926, + "FP": 8734, + "IoU": 0.2354192320608978, + "TN": 1088054, + "TP": 4206, + "n_pred": 12940, + "n_ref": 9132 + }, + "2": { + "Dice": 0.6708379888268157, + "FN": 2476, + "FP": 6362, + "IoU": 0.5047074646940148, + "TN": 1088076, + "TP": 9006, + "n_pred": 15368, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8893107863481832, + "FN": 1425, + "FP": 1082, + "IoU": 0.8006837335029416, + "TN": 1093342, + "TP": 10071, + "n_pred": 11153, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.21626309118804615, + "FN": 1431, + "FP": 10318, + "IoU": 0.1212415856394914, + "TN": 1092550, + "TP": 1621, + "n_pred": 11939, + "n_ref": 3052 + }, + "2": { + "Dice": 0.6647473729667482, + "FN": 3116, + "FP": 6200, + "IoU": 0.49784389823199654, + "TN": 1087368, + "TP": 9236, + "n_pred": 15436, + "n_ref": 12352 + }, + "3": { + "Dice": 0.682963146792406, + "FN": 528, + "FP": 2027, + "IoU": 0.51856039193518, + "TN": 1100613, + "TP": 2752, + "n_pred": 4779, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5993809129354318, + "FN": 2290, + "FP": 6899, + "IoU": 0.42793998630392827, + "TN": 1130817, + "TP": 6874, + "n_pred": 13773, + "n_ref": 9164 + }, + "2": { + "Dice": 0.6238481334919889, + "FN": 8144, + "FP": 5449, + "IoU": 0.45332797104363565, + "TN": 1122015, + "TP": 11272, + "n_pred": 16721, + "n_ref": 19416 + }, + "3": { + "Dice": 0.7786347415678601, + "FN": 1784, + "FP": 3985, + "IoU": 0.6375117813383601, + "TN": 1130965, + "TP": 10146, + "n_pred": 14131, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.12187088274044795, + "FN": 1356, + "FP": 14640, + "IoU": 0.06488951245177131, + "TN": 1129774, + "TP": 1110, + "n_pred": 15750, + "n_ref": 2466 + }, + "2": { + "Dice": 0.164581254317955, + "FN": 21220, + "FP": 11429, + "IoU": 0.08966959431200335, + "TN": 1111015, + "TP": 3216, + "n_pred": 14645, + "n_ref": 24436 + }, + "3": { + "Dice": 0.1894063009915903, + "FN": 1207, + "FP": 11709, + "IoU": 0.1046100519930676, + "TN": 1132455, + "TP": 1509, + "n_pred": 13218, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8257620363241088, + "FN": 2730, + "FP": 1117, + "IoU": 0.70323227647921, + "TN": 787837, + "TP": 9116, + "n_pred": 10233, + "n_ref": 11846 + }, + "2": { + "Dice": 0.7628725518024411, + "FN": 1915, + "FP": 2262, + "IoU": 0.6166483113069016, + "TN": 789904, + "TP": 6719, + "n_pred": 8981, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9180444444444444, + "FN": 907, + "FP": 476, + "IoU": 0.8485047650345054, + "TN": 791671, + "TP": 7746, + "n_pred": 8222, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5476361031518625, + "FN": 881, + "FP": 4171, + "IoU": 0.37706535141800246, + "TN": 792690, + "TP": 3058, + "n_pred": 7229, + "n_ref": 3939 + }, + "2": { + "Dice": 0.7439201297038996, + "FN": 3934, + "FP": 2068, + "IoU": 0.5922554347826087, + "TN": 786080, + "TP": 8718, + "n_pred": 10786, + "n_ref": 12652 + }, + "3": { + "Dice": 0.6942213008551438, + "FN": 167, + "FP": 2193, + "IoU": 0.5316531057749554, + "TN": 795761, + "TP": 2679, + "n_pred": 4872, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6516870326463615, + "FN": 5259, + "FP": 4290, + "IoU": 0.48333513688994695, + "TN": 1329358, + "TP": 8933, + "n_pred": 13223, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8166719179007067, + "FN": 1534, + "FP": 2539, + "IoU": 0.6901483453784709, + "TN": 1334695, + "TP": 9072, + "n_pred": 11611, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9603707723446071, + "FN": 958, + "FP": 393, + "IoU": 0.9237627673381863, + "TN": 1330119, + "TP": 16370, + "n_pred": 16763, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4716823406478579, + "FN": 1354, + "FP": 8758, + "IoU": 0.3086284698482155, + "TN": 1333214, + "TP": 4514, + "n_pred": 13272, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8110580260525134, + "FN": 2183, + "FP": 2444, + "IoU": 0.6821678802033246, + "TN": 1333282, + "TP": 9931, + "n_pred": 12375, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9372988955561353, + "FN": 840, + "FP": 602, + "IoU": 0.8819967266775778, + "TN": 1335620, + "TP": 10778, + "n_pred": 11380, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6959757547857445, + "FN": 3391, + "FP": 4534, + "IoU": 0.5337138150152977, + "TN": 834972, + "TP": 9071, + "n_pred": 13605, + "n_ref": 12462 + }, + "2": { + "Dice": 0.6920289855072463, + "FN": 2572, + "FP": 3548, + "IoU": 0.5290858725761773, + "TN": 838972, + "TP": 6876, + "n_pred": 10424, + "n_ref": 9448 + }, + "3": { + "Dice": 0.8683168598854929, + "FN": 3246, + "FP": 1377, + "IoU": 0.7672791341555499, + "TN": 832103, + "TP": 15242, + "n_pred": 16619, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6519131093122125, + "FN": 1341, + "FP": 4636, + "IoU": 0.4835838949369276, + "TN": 840394, + "TP": 5597, + "n_pred": 10233, + "n_ref": 6938 + }, + "2": { + "Dice": 0.7501581849407937, + "FN": 2993, + "FP": 2535, + "IoU": 0.6002025023504737, + "TN": 838141, + "TP": 8299, + "n_pred": 10834, + "n_ref": 11292 + }, + "3": { + "Dice": 0.8248408968012978, + "FN": 3081, + "FP": 1130, + "IoU": 0.7018972108169333, + "TN": 837842, + "TP": 9915, + "n_pred": 11045, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.48303066388806193, + "FN": 2611, + "FP": 4335, + "IoU": 0.3184182121479737, + "TN": 841777, + "TP": 3245, + "n_pred": 7580, + "n_ref": 5856 + }, + "2": { + "Dice": 0.7150761351685033, + "FN": 2901, + "FP": 3330, + "IoU": 0.5565124555160142, + "TN": 837918, + "TP": 7819, + "n_pred": 11149, + "n_ref": 10720 + }, + "3": { + "Dice": 0.8552987716010827, + "FN": 2686, + "FP": 789, + "IoU": 0.747180793015642, + "TN": 838223, + "TP": 10270, + "n_pred": 11059, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2872211844852214, + "FN": 797, + "FP": 5690, + "IoU": 0.16769309725429818, + "TN": 844174, + "TP": 1307, + "n_pred": 6997, + "n_ref": 2104 + }, + "2": { + "Dice": 0.7496234309623431, + "FN": 3628, + "FP": 2356, + "IoU": 0.5995181367956097, + "TN": 837026, + "TP": 8958, + "n_pred": 11314, + "n_ref": 12586 + }, + "3": { + "Dice": 0.8712628941080482, + "FN": 1271, + "FP": 938, + "IoU": 0.7718917802560925, + "TN": 842284, + "TP": 7475, + "n_pred": 8413, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4260197663971249, + "FN": 7161, + "FP": 8810, + "IoU": 0.2706639875787743, + "TN": 775142, + "TP": 5927, + "n_pred": 14737, + "n_ref": 13088 + }, + "2": { + "Dice": 0.5967666573217456, + "FN": 2468, + "FP": 6162, + "IoU": 0.42527970165157164, + "TN": 782024, + "TP": 6386, + "n_pred": 12548, + "n_ref": 8854 + }, + "3": { + "Dice": 0.8196805392731535, + "FN": 2271, + "FP": 2651, + "IoU": 0.6944565149916196, + "TN": 780931, + "TP": 11187, + "n_pred": 13838, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.32286995515695066, + "FN": 4284, + "FP": 9910, + "IoU": 0.1925133689839572, + "TN": 779462, + "TP": 3384, + "n_pred": 13294, + "n_ref": 7668 + }, + "2": { + "Dice": 0.6219989329539392, + "FN": 2627, + "FP": 5875, + "IoU": 0.4513776860037427, + "TN": 781543, + "TP": 6995, + "n_pred": 12870, + "n_ref": 9622 + }, + "3": { + "Dice": 0.8102167182662539, + "FN": 1181, + "FP": 2497, + "IoU": 0.6809784022898777, + "TN": 785511, + "TP": 7851, + "n_pred": 10348, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6800141492748497, + "FN": 2856, + "FP": 6190, + "IoU": 0.5151677564583557, + "TN": 878012, + "TP": 9612, + "n_pred": 15802, + "n_ref": 12468 + }, + "2": { + "Dice": 0.5650278293135436, + "FN": 4247, + "FP": 5131, + "IoU": 0.3937552524403646, + "TN": 881201, + "TP": 6091, + "n_pred": 11222, + "n_ref": 10338 + }, + "3": { + "Dice": 0.8501197351739682, + "FN": 182, + "FP": 4074, + "IoU": 0.7393115276246478, + "TN": 880344, + "TP": 12070, + "n_pred": 16144, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4775012288306001, + "FN": 1013, + "FP": 10680, + "IoU": 0.31362996008452687, + "TN": 879634, + "TP": 5343, + "n_pred": 16023, + "n_ref": 6356 + }, + "2": { + "Dice": 0.6524943552166319, + "FN": 3860, + "FP": 4297, + "IoU": 0.4842238381283592, + "TN": 880855, + "TP": 7658, + "n_pred": 11955, + "n_ref": 11518 + }, + "3": { + "Dice": 0.8463768115942029, + "FN": 358, + "FP": 2716, + "IoU": 0.7336683417085427, + "TN": 885128, + "TP": 8468, + "n_pred": 11184, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.814118685197441, + "FN": 1994, + "FP": 2219, + "IoU": 0.6865094129027457, + "TN": 748609, + "TP": 9226, + "n_pred": 11445, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8379179401685654, + "FN": 1365, + "FP": 2135, + "IoU": 0.7210488563003108, + "TN": 749501, + "TP": 9047, + "n_pred": 11182, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9508196721311475, + "FN": 326, + "FP": 856, + "IoU": 0.90625, + "TN": 749440, + "TP": 11426, + "n_pred": 12282, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.44258356784954356, + "FN": 568, + "FP": 7553, + "IoU": 0.2841780520052887, + "TN": 750703, + "TP": 3224, + "n_pred": 10777, + "n_ref": 3792 + }, + "2": { + "Dice": 0.7628047965051487, + "FN": 3076, + "FP": 2245, + "IoU": 0.6165597751675435, + "TN": 748171, + "TP": 8556, + "n_pred": 10801, + "n_ref": 11632 + }, + "3": { + "Dice": 0.8928237241776434, + "FN": 632, + "FP": 857, + "IoU": 0.8063970875048758, + "TN": 754357, + "TP": 6202, + "n_pred": 7059, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5515421086074588, + "FN": 2300, + "FP": 6875, + "IoU": 0.38077883512181954, + "TN": 980511, + "TP": 5642, + "n_pred": 12517, + "n_ref": 7942 + }, + "2": { + "Dice": 0.4603422708508677, + "FN": 3005, + "FP": 10460, + "IoU": 0.29899000416493127, + "TN": 976120, + "TP": 5743, + "n_pred": 16203, + "n_ref": 8748 + }, + "3": { + "Dice": 0.8824128686327077, + "FN": 89, + "FP": 4297, + "IoU": 0.7895696396871852, + "TN": 974485, + "TP": 16457, + "n_pred": 20754, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3403434304456878, + "FN": 596, + "FP": 9661, + "IoU": 0.20506858870030226, + "TN": 982425, + "TP": 2646, + "n_pred": 12307, + "n_ref": 3242 + }, + "2": { + "Dice": 0.5389396404288157, + "FN": 1874, + "FP": 9179, + "IoU": 0.3688688402900702, + "TN": 977815, + "TP": 6460, + "n_pred": 15639, + "n_ref": 8334 + }, + "3": { + "Dice": 0.7640833302387761, + "FN": 326, + "FP": 6027, + "IoU": 0.6182320773991947, + "TN": 978687, + "TP": 10288, + "n_pred": 16315, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8904506916555109, + "FN": 2351, + "FP": 595, + "IoU": 0.8025336818821637, + "TN": 743097, + "TP": 11973, + "n_pred": 12568, + "n_ref": 14324 + }, + "2": { + "Dice": 0.7807315816589387, + "FN": 1235, + "FP": 3021, + "IoU": 0.6403278965604665, + "TN": 746183, + "TP": 7577, + "n_pred": 10598, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9412314622020141, + "FN": 227, + "FP": 1156, + "IoU": 0.8889869963075935, + "TN": 745558, + "TP": 11075, + "n_pred": 12231, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.512639841770196, + "FN": 1089, + "FP": 6796, + "IoU": 0.34466422872340424, + "TN": 745984, + "TP": 4147, + "n_pred": 10943, + "n_ref": 5236 + }, + "2": { + "Dice": 0.7560176175355936, + "FN": 1951, + "FP": 2813, + "IoU": 0.607739810621655, + "TN": 745871, + "TP": 7381, + "n_pred": 10194, + "n_ref": 9332 + }, + "3": { + "Dice": 0.6794693385286205, + "FN": 530, + "FP": 2925, + "IoU": 0.5145426443726289, + "TN": 750899, + "TP": 3662, + "n_pred": 6587, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7764145760849661, + "FN": 1586, + "FP": 2077, + "IoU": 0.634540556719545, + "TN": 628953, + "TP": 6360, + "n_pred": 8437, + "n_ref": 7946 + }, + "2": { + "Dice": 0.5971889768612287, + "FN": 501, + "FP": 6062, + "IoU": 0.425708785439272, + "TN": 627548, + "TP": 4865, + "n_pred": 10927, + "n_ref": 5366 + }, + "3": { + "Dice": 0.805558912386707, + "FN": 668, + "FP": 2550, + "IoU": 0.6744233104006475, + "TN": 629092, + "TP": 6666, + "n_pred": 9216, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4921407185628742, + "FN": 390, + "FP": 5038, + "IoU": 0.3263837180441797, + "TN": 630918, + "TP": 2630, + "n_pred": 7668, + "n_ref": 3020 + }, + "2": { + "Dice": 0.6775588659298414, + "FN": 1007, + "FP": 5032, + "IoU": 0.5123546511627907, + "TN": 626592, + "TP": 6345, + "n_pred": 11377, + "n_ref": 7352 + }, + "3": { + "Dice": 0.5407237345577786, + "FN": 283, + "FP": 3918, + "IoU": 0.37054240335630806, + "TN": 632302, + "TP": 2473, + "n_pred": 6391, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4428171440878742, + "FN": 9272, + "FP": 6250, + "IoU": 0.28437067773167357, + "TN": 961350, + "TP": 6168, + "n_pred": 12418, + "n_ref": 15440 + }, + "2": { + "Dice": 0.6819323984761287, + "FN": 1483, + "FP": 6365, + "IoU": 0.5173728552979522, + "TN": 966779, + "TP": 8413, + "n_pred": 14778, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9624021081542515, + "FN": 253, + "FP": 760, + "IoU": 0.9275289741021605, + "TN": 969062, + "TP": 12965, + "n_pred": 13725, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3154694424404823, + "FN": 3127, + "FP": 10157, + "IoU": 0.18727439583970634, + "TN": 966695, + "TP": 3061, + "n_pred": 13218, + "n_ref": 6188 + }, + "2": { + "Dice": 0.5675271061107835, + "FN": 3701, + "FP": 5832, + "IoU": 0.3961869774512288, + "TN": 967252, + "TP": 6255, + "n_pred": 12087, + "n_ref": 9956 + }, + "3": { + "Dice": 0.6480479432128935, + "FN": 421, + "FP": 5628, + "IoU": 0.4793423997245653, + "TN": 971422, + "TP": 5569, + "n_pred": 11197, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.726701642965622, + "FN": 5653, + "FP": 2265, + "IoU": 0.5707237733803199, + "TN": 1030131, + "TP": 10527, + "n_pred": 12792, + "n_ref": 16180 + }, + "2": { + "Dice": 0.5806566420500044, + "FN": 2182, + "FP": 7244, + "IoU": 0.40910230692076227, + "TN": 1032624, + "TP": 6526, + "n_pred": 13770, + "n_ref": 8708 + }, + "3": { + "Dice": 0.8866666666666667, + "FN": 556, + "FP": 2436, + "IoU": 0.7964071856287425, + "TN": 1033880, + "TP": 11704, + "n_pred": 14140, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.566598097197223, + "FN": 1023, + "FP": 5719, + "IoU": 0.3952820880796484, + "TN": 1037427, + "TP": 4407, + "n_pred": 10126, + "n_ref": 5430 + }, + "2": { + "Dice": 0.6013656510801422, + "FN": 2792, + "FP": 7191, + "IoU": 0.4299663107405927, + "TN": 1031063, + "TP": 7530, + "n_pred": 14721, + "n_ref": 10322 + }, + "3": { + "Dice": 0.6258503401360545, + "FN": 480, + "FP": 5020, + "IoU": 0.45544554455445546, + "TN": 1038476, + "TP": 4600, + "n_pred": 9620, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42552349285516367, + "FN": 5787, + "FP": 8726, + "IoU": 0.2702634754625905, + "TN": 469328, + "TP": 5375, + "n_pred": 14101, + "n_ref": 11162 + }, + "2": { + "Dice": 0.38942488409973686, + "FN": 1163, + "FP": 3710, + "IoU": 0.24179243815154816, + "TN": 482789, + "TP": 1554, + "n_pred": 5264, + "n_ref": 2717 + }, + "3": { + "Dice": 0.7469673671621391, + "FN": 279, + "FP": 2683, + "IoU": 0.5961276247613854, + "TN": 481882, + "TP": 4372, + "n_pred": 7055, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4006318491460164, + "FN": 2593, + "FP": 9549, + "IoU": 0.25049382716049384, + "TN": 473016, + "TP": 4058, + "n_pred": 13607, + "n_ref": 6651 + }, + "2": { + "Dice": 0.6151338133405787, + "FN": 1096, + "FP": 1737, + "IoU": 0.44418285265842655, + "TN": 484119, + "TP": 2264, + "n_pred": 4001, + "n_ref": 3360 + }, + "3": { + "Dice": 0.6020999275887038, + "FN": 127, + "FP": 2071, + "IoU": 0.43071743071743074, + "TN": 485355, + "TP": 1663, + "n_pred": 3734, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7461984972045155, + "FN": 5399, + "FP": 1728, + "IoU": 0.5951488298114065, + "TN": 462876, + "TP": 10477, + "n_pred": 12205, + "n_ref": 15876 + }, + "2": { + "Dice": 0.6386929738416213, + "FN": 942, + "FP": 3105, + "IoU": 0.4691762854144806, + "TN": 472856, + "TP": 3577, + "n_pred": 6682, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9115489716669064, + "FN": 622, + "FP": 608, + "IoU": 0.8374735729386892, + "TN": 472912, + "TP": 6338, + "n_pred": 6946, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.760841439455652, + "FN": 3672, + "FP": 1319, + "IoU": 0.6139984532095901, + "TN": 467550, + "TP": 7939, + "n_pred": 9258, + "n_ref": 11611 + }, + "2": { + "Dice": 0.7386422525479357, + "FN": 1386, + "FP": 1640, + "IoU": 0.5855929882224048, + "TN": 473178, + "TP": 4276, + "n_pred": 5916, + "n_ref": 5662 + }, + "3": { + "Dice": 0.7917174177831913, + "FN": 206, + "FP": 1162, + "IoU": 0.655241935483871, + "TN": 476512, + "TP": 2600, + "n_pred": 3762, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7295162006213937, + "FN": 8345, + "FP": 796, + "IoU": 0.5742034656232532, + "TN": 623172, + "TP": 12327, + "n_pred": 13123, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7396809058157489, + "FN": 1880, + "FP": 3178, + "IoU": 0.5868997059784384, + "TN": 632396, + "TP": 7186, + "n_pred": 10364, + "n_ref": 9066 + }, + "3": { + "Dice": 0.884064773527341, + "FN": 2697, + "FP": 267, + "IoU": 0.7922187171398528, + "TN": 630375, + "TP": 11301, + "n_pred": 11568, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.767040708864437, + "FN": 4771, + "FP": 1644, + "IoU": 0.6221135721017907, + "TN": 627664, + "TP": 10561, + "n_pred": 12205, + "n_ref": 15332 + }, + "2": { + "Dice": 0.809933803487215, + "FN": 2806, + "FP": 1587, + "IoU": 0.680578782811023, + "TN": 630887, + "TP": 9360, + "n_pred": 10947, + "n_ref": 12166 + }, + "3": { + "Dice": 0.8697997437799204, + "FN": 1112, + "FP": 819, + "IoU": 0.7695979000119317, + "TN": 636259, + "TP": 6450, + "n_pred": 7269, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7421577326582807, + "FN": 7833, + "FP": 2047, + "IoU": 0.5900244823436657, + "TN": 540381, + "TP": 14219, + "n_pred": 16266, + "n_ref": 22052 + }, + "2": { + "Dice": 0.5296638845025942, + "FN": 947, + "FP": 5308, + "IoU": 0.3602332003682111, + "TN": 554703, + "TP": 3522, + "n_pred": 8830, + "n_ref": 4469 + }, + "3": { + "Dice": 0.8455191382076552, + "FN": 519, + "FP": 2177, + "IoU": 0.7323803851498908, + "TN": 554406, + "TP": 7378, + "n_pred": 9555, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5718405507232894, + "FN": 2285, + "FP": 6920, + "IoU": 0.40040385617509117, + "TN": 549128, + "TP": 6147, + "n_pred": 13067, + "n_ref": 8432 + }, + "2": { + "Dice": 0.5974482389792956, + "FN": 953, + "FP": 4316, + "IoU": 0.4259723281403203, + "TN": 555301, + "TP": 3910, + "n_pred": 8226, + "n_ref": 4863 + }, + "3": { + "Dice": 0.6006911115377231, + "FN": 323, + "FP": 3837, + "IoU": 0.4292769927287694, + "TN": 557191, + "TP": 3129, + "n_pred": 6966, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.663571470024955, + "FN": 1858, + "FP": 3939, + "IoU": 0.4965259683863123, + "TN": 407366, + "TP": 5717, + "n_pred": 9656, + "n_ref": 7575 + }, + "2": { + "Dice": 0.18205574912891986, + "FN": 2020, + "FP": 5492, + "IoU": 0.10014374700527072, + "TN": 410532, + "TP": 836, + "n_pred": 6328, + "n_ref": 2856 + }, + "3": { + "Dice": 0.6932428611817925, + "FN": 521, + "FP": 2734, + "IoU": 0.5305062743401125, + "TN": 411947, + "TP": 3678, + "n_pred": 6412, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6089588377723971, + "FN": 713, + "FP": 4455, + "IoU": 0.43777197563098347, + "TN": 409688, + "TP": 4024, + "n_pred": 8479, + "n_ref": 4737 + }, + "2": { + "Dice": 0.19163292847503374, + "FN": 2141, + "FP": 5047, + "IoU": 0.10597014925373134, + "TN": 410840, + "TP": 852, + "n_pred": 5899, + "n_ref": 2993 + }, + "3": { + "Dice": 0.6303066037735849, + "FN": 245, + "FP": 2263, + "IoU": 0.46018080068876455, + "TN": 414234, + "TP": 2138, + "n_pred": 4401, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8116569396668342, + "FN": 3066, + "FP": 1807, + "IoU": 0.6830156768360112, + "TN": 481137, + "TP": 10500, + "n_pred": 12307, + "n_ref": 13566 + }, + "2": { + "Dice": 0.6273779983457403, + "FN": 3121, + "FP": 2285, + "IoU": 0.4570653811388973, + "TN": 486553, + "TP": 4551, + "n_pred": 6836, + "n_ref": 7672 + }, + "3": { + "Dice": 0.8680841335162323, + "FN": 178, + "FP": 2130, + "IoU": 0.7669157745909917, + "TN": 486608, + "TP": 7594, + "n_pred": 9724, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7989712816116588, + "FN": 3010, + "FP": 2149, + "IoU": 0.6652391149179158, + "TN": 481099, + "TP": 10252, + "n_pred": 12401, + "n_ref": 13262 + }, + "2": { + "Dice": 0.5279713044078085, + "FN": 4649, + "FP": 2194, + "IoU": 0.3586691658856607, + "TN": 485840, + "TP": 3827, + "n_pred": 6021, + "n_ref": 8476 + }, + "3": { + "Dice": 0.6621435594886922, + "FN": 33, + "FP": 3403, + "IoU": 0.49492870792297516, + "TN": 489707, + "TP": 3367, + "n_pred": 6770, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_000/summary_cross_val.json b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_000/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..baba44c753c31b58719db8b739adfb460e54e1d8 --- /dev/null +++ b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_000/summary_cross_val.json @@ -0,0 +1,2364 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.40359578517124167, + "FN": 19.416666666666668, + "FP": 7.777777777777778, + "IoU": 0.3580770402060145, + "TN": 717.8611111111112, + "TP": 54.944444444444436, + "n_pred": 62.72222222222223, + "n_ref": 74.36111111111111 + }, + "mean": { + "1": { + "Dice": 0.30194435188687097, + "FN": 8.166666666666666, + "FP": 8.916666666666666, + "IoU": 0.27804358237547894, + "TN": 699.0833333333334, + "TP": 83.83333333333333, + "n_pred": 92.75, + "n_ref": 92.0 + }, + "2": { + "Dice": 0.22640806793008741, + "FN": 46.583333333333336, + "FP": 11.5, + "IoU": 0.16597994736587177, + "TN": 711.8333333333334, + "TP": 30.083333333333332, + "n_pred": 41.583333333333336, + "n_ref": 76.66666666666667 + }, + "3": { + "Dice": 0.6824349356967667, + "FN": 3.5, + "FP": 2.9166666666666665, + "IoU": 0.6302075908766928, + "TN": 742.6666666666666, + "TP": 50.916666666666664, + "n_pred": 53.833333333333336, + "n_ref": 54.416666666666664 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.007751937984496124, + "FN": 255, + "FP": 1, + "IoU": 0.0038910505836575876, + "TN": 543, + "TP": 1, + "n_pred": 2, + "n_ref": 256 + }, + "3": { + "Dice": 0.9516648764769066, + "FN": 28, + "FP": 17, + "IoU": 0.9077868852459017, + "TN": 312, + "TP": 443, + "n_pred": 460, + "n_ref": 471 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.3825503355704698, + "FN": 61, + "FP": 123, + "IoU": 0.23651452282157676, + "TN": 559, + "TP": 57, + "n_pred": 180, + "n_ref": 118 + }, + "3": { + "Dice": 0.8235294117647058, + "FN": 2, + "FP": 16, + "IoU": 0.7, + "TN": 740, + "TP": 42, + "n_pred": 58, + "n_ref": 44 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8419301164725458, + "FN": 95, + "FP": 0, + "IoU": 0.7270114942528736, + "TN": 452, + "TP": 253, + "n_pred": 253, + "n_ref": 348 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7417380660954712, + "FN": 199, + "FP": 12, + "IoU": 0.5894941634241245, + "TN": 286, + "TP": 303, + "n_pred": 315, + "n_ref": 502 + }, + "3": { + "Dice": 0.9545454545454546, + "FN": 12, + "FP": 0, + "IoU": 0.9130434782608695, + "TN": 662, + "TP": 126, + "n_pred": 126, + "n_ref": 138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 17, + "IoU": 0.0, + "TN": 783, + "TP": 0, + "n_pred": 17, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 42, + "IoU": 0.0, + "TN": 758, + "TP": 0, + "n_pred": 42, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.96973599484868, + "FN": 3, + "FP": 44, + "IoU": 0.94125, + "TN": 0, + "TP": 753, + "n_pred": 797, + "n_ref": 756 + }, + "2": { + "Dice": 0.0, + "FN": 44, + "FP": 0, + "IoU": 0.0, + "TN": 756, + "TP": 0, + "n_pred": 0, + "n_ref": 44 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.6977537410657185, + "FN": 10.0, + "FP": 10.06060606060606, + "IoU": 0.6110072713898028, + "TN": 703.939393939394, + "TP": 76.0, + "n_pred": 86.06060606060606, + "n_ref": 86.0 + }, + "mean": { + "1": { + "Dice": 0.47207195978229255, + "FN": 10.454545454545455, + "FP": 3.0, + "IoU": 0.4471302921884317, + "TN": 697.1818181818181, + "TP": 89.36363636363636, + "n_pred": 92.36363636363636, + "n_ref": 99.81818181818181 + }, + "2": { + "Dice": 0.7481509353483852, + "FN": 13.818181818181818, + "FP": 11.545454545454545, + "IoU": 0.6051079488867507, + "TN": 725.0909090909091, + "TP": 49.54545454545455, + "n_pred": 61.09090909090909, + "n_ref": 63.36363636363637 + }, + "3": { + "Dice": 0.8730383280664779, + "FN": 5.7272727272727275, + "FP": 15.636363636363637, + "IoU": 0.7807835730942257, + "TN": 689.5454545454545, + "TP": 89.0909090909091, + "n_pred": 104.72727272727273, + "n_ref": 94.81818181818181 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 29, + "IoU": 0.0, + "TN": 771, + "TP": 0, + "n_pred": 29, + "n_ref": 0 + }, + "2": { + "Dice": 0.8388625592417062, + "FN": 90, + "FP": 46, + "IoU": 0.7224489795918367, + "TN": 310, + "TP": 354, + "n_pred": 400, + "n_ref": 444 + }, + "3": { + "Dice": 0.863013698630137, + "FN": 0, + "FP": 40, + "IoU": 0.7590361445783133, + "TN": 634, + "TP": 126, + "n_pred": 166, + "n_ref": 126 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "2": { + "Dice": 0.631578947368421, + "FN": 31, + "FP": 32, + "IoU": 0.46153846153846156, + "TN": 683, + "TP": 54, + "n_pred": 86, + "n_ref": 85 + }, + "3": { + "Dice": 0.7983310152990264, + "FN": 14, + "FP": 131, + "IoU": 0.6643518518518519, + "TN": 368, + "TP": 287, + "n_pred": 418, + "n_ref": 301 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7740112994350282, + "FN": 31, + "FP": 49, + "IoU": 0.631336405529954, + "TN": 583, + "TP": 137, + "n_pred": 186, + "n_ref": 168 + }, + "3": { + "Dice": 0.9577702702702703, + "FN": 49, + "FP": 1, + "IoU": 0.9189627228525121, + "TN": 183, + "TP": 567, + "n_pred": 568, + "n_ref": 616 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9502347417840376, + "FN": 52, + "FP": 1, + "IoU": 0.9051878354203936, + "TN": 241, + "TP": 506, + "n_pred": 507, + "n_ref": 558 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9380530973451328, + "FN": 63, + "FP": 0, + "IoU": 0.8833333333333333, + "TN": 260, + "TP": 477, + "n_pred": 477, + "n_ref": 540 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8352814959729647, + "FN": 19.848484848484848, + "FP": 16.666666666666668, + "IoU": 0.7347446296397134, + "TN": 650.6060606060606, + "TP": 112.87878787878788, + "n_pred": 129.54545454545453, + "n_ref": 132.72727272727272 + }, + "mean": { + "1": { + "Dice": 0.92972044062897, + "FN": 4.7272727272727275, + "FP": 15.909090909090908, + "IoU": 0.8711953403480741, + "TN": 602.0909090909091, + "TP": 177.27272727272728, + "n_pred": 193.1818181818182, + "n_ref": 182.0 + }, + "2": { + "Dice": 0.6912220213084471, + "FN": 34.09090909090909, + "FP": 31.363636363636363, + "IoU": 0.5386833671520562, + "TN": 660.3636363636364, + "TP": 74.18181818181819, + "n_pred": 105.54545454545455, + "n_ref": 108.27272727272727 + }, + "3": { + "Dice": 0.8849020259814775, + "FN": 20.727272727272727, + "FP": 2.727272727272727, + "IoU": 0.7943551814190101, + "TN": 689.3636363636364, + "TP": 87.18181818181819, + "n_pred": 89.9090909090909, + "n_ref": 107.9090909090909 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7041666666666667, + "FN": 59, + "FP": 83, + "IoU": 0.5434083601286174, + "TN": 489, + "TP": 169, + "n_pred": 252, + "n_ref": 228 + }, + "3": { + "Dice": 0.8903566710700133, + "FN": 80, + "FP": 3, + "IoU": 0.8023809523809524, + "TN": 380, + "TP": 337, + "n_pred": 340, + "n_ref": 417 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.4690265486725664, + "FN": 166, + "FP": 74, + "IoU": 0.3063583815028902, + "TN": 454, + "TP": 106, + "n_pred": 180, + "n_ref": 272 + }, + "3": { + "Dice": 0.849624060150376, + "FN": 80, + "FP": 0, + "IoU": 0.738562091503268, + "TN": 494, + "TP": 226, + "n_pred": 226, + "n_ref": 306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8665105386416861, + "FN": 4, + "FP": 53, + "IoU": 0.7644628099173554, + "TN": 558, + "TP": 185, + "n_pred": 238, + "n_ref": 189 + }, + "2": { + "Dice": 0.8434782608695652, + "FN": 52, + "FP": 20, + "IoU": 0.7293233082706767, + "TN": 534, + "TP": 194, + "n_pred": 214, + "n_ref": 246 + }, + "3": { + "Dice": 0.9049773755656109, + "FN": 20, + "FP": 1, + "IoU": 0.8264462809917356, + "TN": 679, + "TP": 100, + "n_pred": 101, + "n_ref": 120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7272727272727273, + "FN": 16, + "FP": 140, + "IoU": 0.5714285714285714, + "TN": 436, + "TP": 208, + "n_pred": 348, + "n_ref": 224 + }, + "3": { + "Dice": 0.8670520231213873, + "FN": 20, + "FP": 26, + "IoU": 0.7653061224489796, + "TN": 604, + "TP": 150, + "n_pred": 176, + "n_ref": 170 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.924892703862661, + "FN": 1, + "FP": 69, + "IoU": 0.8602794411177644, + "TN": 299, + "TP": 431, + "n_pred": 500, + "n_ref": 432 + }, + "2": { + "Dice": 0.7204610951008645, + "FN": 69, + "FP": 28, + "IoU": 0.5630630630630631, + "TN": 578, + "TP": 125, + "n_pred": 153, + "n_ref": 194 + }, + "3": { + "Dice": 0.9125, + "FN": 28, + "FP": 0, + "IoU": 0.8390804597701149, + "TN": 626, + "TP": 146, + "n_pred": 146, + "n_ref": 174 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9651086240947993, + "FN": 40, + "FP": 13, + "IoU": 0.9325699745547074, + "TN": 14, + "TP": 733, + "n_pred": 746, + "n_ref": 773 + }, + "2": { + "Dice": 0.6829268292682927, + "FN": 13, + "FP": 0, + "IoU": 0.5185185185185185, + "TN": 773, + "TP": 14, + "n_pred": 14, + "n_ref": 27 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9623698959167334, + "FN": 7, + "FP": 40, + "IoU": 0.9274691358024691, + "TN": 152, + "TP": 601, + "n_pred": 641, + "n_ref": 608 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.4232635742143913, + "FN": 16.27777777777778, + "FP": 27.027777777777775, + "IoU": 0.3573046275866007, + "TN": 744.0, + "TP": 79.3611111111111, + "n_pred": 106.38888888888887, + "n_ref": 95.63888888888887 + }, + "mean": { + "1": { + "Dice": 0.24281691101816183, + "FN": 26.583333333333332, + "FP": 34.416666666666664, + "IoU": 0.18124908493353686, + "TN": 768.0, + "TP": 37.666666666666664, + "n_pred": 72.08333333333333, + "n_ref": 64.25 + }, + "2": { + "Dice": 0.49734277611405764, + "FN": 8.416666666666666, + "FP": 34.333333333333336, + "IoU": 0.394549153147402, + "TN": 767.5, + "TP": 56.416666666666664, + "n_pred": 90.75, + "n_ref": 64.83333333333333 + }, + "3": { + "Dice": 0.5296310355109545, + "FN": 13.833333333333334, + "FP": 12.333333333333334, + "IoU": 0.4961156446788631, + "TN": 696.5, + "TP": 144.0, + "n_pred": 156.33333333333334, + "n_ref": 157.83333333333334 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 0, + "TP": 800, + "n_pred": 800, + "n_ref": 800 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 19, + "IoU": 0.0, + "TN": 781, + "TP": 0, + "n_pred": 19, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6015037593984962, + "FN": 53, + "FP": 0, + "IoU": 0.43010752688172044, + "TN": 707, + "TP": 40, + "n_pred": 40, + "n_ref": 93 + }, + "2": { + "Dice": 0.41509433962264153, + "FN": 0, + "FP": 93, + "IoU": 0.2619047619047619, + "TN": 674, + "TP": 33, + "n_pred": 126, + "n_ref": 33 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "2": { + "Dice": 0.7049608355091384, + "FN": 17, + "FP": 96, + "IoU": 0.5443548387096774, + "TN": 552, + "TP": 135, + "n_pred": 231, + "n_ref": 152 + }, + "3": { + "Dice": 0.8856405846947549, + "FN": 133, + "FP": 0, + "IoU": 0.7947530864197531, + "TN": 152, + "TP": 515, + "n_pred": 515, + "n_ref": 648 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 90, + "FP": 0, + "IoU": 0.0, + "TN": 710, + "TP": 0, + "n_pred": 0, + "n_ref": 90 + }, + "2": { + "Dice": 0.7694974003466204, + "FN": 58, + "FP": 75, + "IoU": 0.6253521126760564, + "TN": 445, + "TP": 222, + "n_pred": 297, + "n_ref": 280 + }, + "3": { + "Dice": 0.8693957115009746, + "FN": 25, + "FP": 42, + "IoU": 0.7689655172413793, + "TN": 510, + "TP": 223, + "n_pred": 265, + "n_ref": 248 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5895522388059702, + "FN": 8, + "FP": 212, + "IoU": 0.41798941798941797, + "TN": 1222, + "TP": 158, + "n_pred": 370, + "n_ref": 166 + }, + "2": { + "Dice": 0.736231884057971, + "FN": 24, + "FP": 67, + "IoU": 0.5825688073394495, + "TN": 1382, + "TP": 127, + "n_pred": 194, + "n_ref": 151 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 1597, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7514792899408284, + "FN": 168, + "FP": 0, + "IoU": 0.6018957345971564, + "TN": 378, + "TP": 254, + "n_pred": 254, + "n_ref": 422 + }, + "2": { + "Dice": 0.8556149732620321, + "FN": 2, + "FP": 52, + "IoU": 0.7476635514018691, + "TN": 586, + "TP": 160, + "n_pred": 212, + "n_ref": 162 + }, + "3": { + "Dice": 0.9523809523809523, + "FN": 8, + "FP": 11, + "IoU": 0.9090909090909091, + "TN": 591, + "TP": 190, + "n_pred": 201, + "n_ref": 198 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 43, + "IoU": 0.0, + "TN": 757, + "TP": 0, + "n_pred": 43, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 772, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 112, + "IoU": 0.0, + "TN": 688, + "TP": 0, + "n_pred": 112, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 38, + "IoU": 0.0, + "TN": 762, + "TP": 0, + "n_pred": 38, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 73, + "IoU": 0.0, + "TN": 727, + "TP": 0, + "n_pred": 73, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient090_frame04.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.5071343759312638, + "FN": 14.444444444444445, + "FP": 18.916666666666668, + "IoU": 0.44750237480102983, + "TN": 770.8055555555555, + "TP": 62.5, + "n_pred": 81.41666666666667, + "n_ref": 76.94444444444444 + }, + "mean": { + "1": { + "Dice": 0.38772977397940533, + "FN": 4.666666666666667, + "FP": 16.333333333333332, + "IoU": 0.37619055542613733, + "TN": 767.1666666666666, + "TP": 78.5, + "n_pred": 94.83333333333333, + "n_ref": 83.16666666666667 + }, + "2": { + "Dice": 0.5718949444769141, + "FN": 30.083333333333332, + "FP": 23.833333333333332, + "IoU": 0.5062806406421256, + "TN": 741.25, + "TP": 71.5, + "n_pred": 95.33333333333333, + "n_ref": 101.58333333333333 + }, + "3": { + "Dice": 0.561778409337472, + "FN": 8.583333333333334, + "FP": 16.583333333333332, + "IoU": 0.4600359283348266, + "TN": 804.0, + "TP": 37.5, + "n_pred": 54.083333333333336, + "n_ref": 46.083333333333336 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 282, + "FP": 0, + "IoU": 0.0, + "TN": 518, + "TP": 0, + "n_pred": 0, + "n_ref": 282 + }, + "3": { + "Dice": 0.5054945054945055, + "FN": 90, + "FP": 0, + "IoU": 0.3382352941176471, + "TN": 664, + "TP": 46, + "n_pred": 46, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 9, + "IoU": 0.0, + "TN": 791, + "TP": 0, + "n_pred": 9, + "n_ref": 0 + }, + "2": { + "Dice": 0.8827586206896552, + "FN": 44, + "FP": 41, + "IoU": 0.7901234567901234, + "TN": 395, + "TP": 320, + "n_pred": 361, + "n_ref": 364 + }, + "3": { + "Dice": 0.9041450777202072, + "FN": 13, + "FP": 61, + "IoU": 0.8250591016548463, + "TN": 377, + "TP": 349, + "n_pred": 410, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9702457956015524, + "FN": 19, + "FP": 4, + "IoU": 0.9422110552763819, + "TN": 402, + "TP": 375, + "n_pred": 379, + "n_ref": 394 + }, + "2": { + "Dice": 0.955, + "FN": 17, + "FP": 19, + "IoU": 0.9138755980861244, + "TN": 382, + "TP": 382, + "n_pred": 401, + "n_ref": 399 + }, + "3": { + "Dice": 0.5185185185185185, + "FN": 0, + "FP": 13, + "IoU": 0.35, + "TN": 780, + "TP": 7, + "n_pred": 20, + "n_ref": 7 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.968403074295474, + "FN": 37, + "FP": 0, + "IoU": 0.9387417218543046, + "TN": 996, + "TP": 567, + "n_pred": 567, + "n_ref": 604 + }, + "2": { + "Dice": 0.84375, + "FN": 13, + "FP": 37, + "IoU": 0.7297297297297297, + "TN": 1415, + "TP": 135, + "n_pred": 172, + "n_ref": 148 + }, + "3": { + "Dice": 0.8807339449541285, + "FN": 0, + "FP": 13, + "IoU": 0.7868852459016393, + "TN": 1539, + "TP": 48, + "n_pred": 61, + "n_ref": 48 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 180, + "IoU": 0.0, + "TN": 620, + "TP": 0, + "n_pred": 180, + "n_ref": 0 + }, + "2": { + "Dice": 0.17796610169491525, + "FN": 5, + "FP": 189, + "IoU": 0.09767441860465116, + "TN": 585, + "TP": 21, + "n_pred": 210, + "n_ref": 26 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 112, + "IoU": 0.0, + "TN": 688, + "TP": 0, + "n_pred": 112, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861023/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient073_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.573405794471116, + "FN": 15.99747474747475, + "FP": 16.08989898989899, + "IoU": 0.5017271887246323, + "TN": 717.4424242424243, + "TP": 77.13686868686868, + "n_pred": 93.22676767676766, + "n_ref": 93.13434343434344 + }, + "mean": { + "1": { + "Dice": 0.4668566874591401, + "FN": 10.919696969696968, + "FP": 15.715151515151513, + "IoU": 0.4307617710543318, + "TN": 706.7045454545454, + "TP": 93.32727272727274, + "n_pred": 109.04242424242425, + "n_ref": 104.2469696969697 + }, + "2": { + "Dice": 0.5470037490355782, + "FN": 26.59848484848485, + "FP": 22.515151515151516, + "IoU": 0.4421202114388413, + "TN": 721.2075757575758, + "TP": 56.34545454545455, + "n_pred": 78.86060606060606, + "n_ref": 82.94393939393939 + }, + "3": { + "Dice": 0.7063569469186296, + "FN": 10.474242424242425, + "FP": 10.03939393939394, + "IoU": 0.6322995836807237, + "TN": 724.4151515151515, + "TP": 81.73787878787878, + "n_pred": 91.77727272727273, + "n_ref": 92.21212121212122 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_001/summary.json b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_001/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..07a5e678564d598aa502535c37cb0de80cb72539 --- /dev/null +++ b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_001/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.6913967979473377, + "FN": 1433.6333333333332, + "FP": 5457.24, + "IoU": 0.5605102584804972, + "TN": 838777.2866666666, + "TP": 8760.480000000001, + "n_pred": 14217.72, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.579027039741247, + "FN": 1838.4, + "FP": 8604.48, + "IoU": 0.43362267749515576, + "TN": 835970.1, + "TP": 8015.66, + "n_pred": 16620.14, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.6906766482982818, + "FN": 1851.0, + "FP": 4754.74, + "IoU": 0.5449235940565279, + "TN": 839618.4, + "TP": 8204.5, + "n_pred": 12959.24, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8044867058024845, + "FN": 611.5, + "FP": 3012.5, + "IoU": 0.7029845038898079, + "TN": 840743.36, + "TP": 10061.28, + "n_pred": 13073.78, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6184061763090739, + "FN": 1874, + "FP": 9939, + "IoU": 0.44760346036941784, + "TN": 1084535, + "TP": 9572, + "n_pred": 19511, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8170560365953276, + "FN": 953, + "FP": 4646, + "IoU": 0.6906971605347475, + "TN": 1087818, + "TP": 12503, + "n_pred": 17149, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9388859716443834, + "FN": 964, + "FP": 2062, + "IoU": 0.8848115721355158, + "TN": 1079650, + "TP": 23244, + "n_pred": 25306, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.41570314600699115, + "FN": 240, + "FP": 12798, + "IoU": 0.2623896809232858, + "TN": 1088244, + "TP": 4638, + "n_pred": 17436, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8486769230769231, + "FN": 2189, + "FP": 2729, + "IoU": 0.7371318616708536, + "TN": 1087211, + "TP": 13791, + "n_pred": 16520, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9217791411042945, + "FN": 1053, + "FP": 1905, + "IoU": 0.8549075391180654, + "TN": 1085533, + "TP": 17429, + "n_pred": 19334, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.47129763627592863, + "FN": 2031, + "FP": 13313, + "IoU": 0.30829914799621333, + "TN": 887257, + "TP": 6839, + "n_pred": 20152, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8706936069678056, + "FN": 1440, + "FP": 2227, + "IoU": 0.7709985636670206, + "TN": 893427, + "TP": 12346, + "n_pred": 14573, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9718606024808033, + "FN": 845, + "FP": 346, + "IoU": 0.9452615130067101, + "TN": 887682, + "TP": 20567, + "n_pred": 20913, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3701830084808808, + "FN": 2002, + "FP": 14930, + "IoU": 0.22713164140953077, + "TN": 887532, + "TP": 4976, + "n_pred": 19906, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8726799305648284, + "FN": 1253, + "FP": 2561, + "IoU": 0.774119040568552, + "TN": 892555, + "TP": 13071, + "n_pred": 15632, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9664627485252348, + "FN": 940, + "FP": 288, + "IoU": 0.9351019976746644, + "TN": 890518, + "TP": 17694, + "n_pred": 17982, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8194160902225834, + "FN": 3507, + "FP": 5604, + "IoU": 0.6940769592371231, + "TN": 1395978, + "TP": 20671, + "n_pred": 26275, + "n_ref": 24178 + }, + "2": { + "Dice": 0.7533338878261111, + "FN": 1498, + "FP": 7399, + "IoU": 0.6042787884179157, + "TN": 1403277, + "TP": 13586, + "n_pred": 20985, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9449909773560743, + "FN": 925, + "FP": 1910, + "IoU": 0.895718384462591, + "TN": 1398574, + "TP": 24351, + "n_pred": 26261, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7328915274517925, + "FN": 1625, + "FP": 9983, + "IoU": 0.5783968328914394, + "TN": 1398227, + "TP": 15925, + "n_pred": 25908, + "n_ref": 17550 + }, + "2": { + "Dice": 0.75106529209622, + "FN": 1408, + "FP": 7647, + "IoU": 0.6013647369579573, + "TN": 1403045, + "TP": 13660, + "n_pred": 21307, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9244385107345119, + "FN": 1235, + "FP": 2274, + "IoU": 0.8594938736285738, + "TN": 1400786, + "TP": 21465, + "n_pred": 23739, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5957499586571854, + "FN": 2053, + "FP": 7725, + "IoU": 0.4242477771889537, + "TN": 745065, + "TP": 7205, + "n_pred": 14930, + "n_ref": 9258 + }, + "2": { + "Dice": 0.7821019169636837, + "FN": 1291, + "FP": 3233, + "IoU": 0.6421735347623191, + "TN": 749405, + "TP": 8119, + "n_pred": 11352, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9623877245508982, + "FN": 587, + "FP": 619, + "IoU": 0.9275022542831379, + "TN": 745413, + "TP": 15429, + "n_pred": 16048, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.41492713666797953, + "FN": 704, + "FP": 11180, + "IoU": 0.2617716486520065, + "TN": 745950, + "TP": 4214, + "n_pred": 15394, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8229917384426085, + "FN": 1874, + "FP": 2154, + "IoU": 0.6992234169653524, + "TN": 748656, + "TP": 9364, + "n_pred": 11518, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9408083441981747, + "FN": 1088, + "FP": 274, + "IoU": 0.8882323978335795, + "TN": 749862, + "TP": 10824, + "n_pred": 11098, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5873788328387735, + "FN": 6421, + "FP": 4008, + "IoU": 0.4158077526327582, + "TN": 1060420, + "TP": 7423, + "n_pred": 11431, + "n_ref": 13844 + }, + "2": { + "Dice": 0.6818162969106365, + "FN": 1649, + "FP": 6024, + "IoU": 0.5172392097646911, + "TN": 1062378, + "TP": 8221, + "n_pred": 14245, + "n_ref": 9870 + }, + "3": { + "Dice": 0.8519949892054692, + "FN": 2421, + "FP": 3132, + "IoU": 0.7421526745913819, + "TN": 1056736, + "TP": 15983, + "n_pred": 19115, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6248487293263413, + "FN": 5551, + "FP": 3749, + "IoU": 0.4543854502786741, + "TN": 1061227, + "TP": 7745, + "n_pred": 11494, + "n_ref": 13296 + }, + "2": { + "Dice": 0.7000603986309644, + "FN": 2107, + "FP": 5342, + "IoU": 0.5385330194523603, + "TN": 1062130, + "TP": 8693, + "n_pred": 14035, + "n_ref": 10800 + }, + "3": { + "Dice": 0.8406167263666096, + "FN": 1732, + "FP": 3385, + "IoU": 0.7250550749556713, + "TN": 1059661, + "TP": 13494, + "n_pred": 16879, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3351934290551132, + "FN": 3786, + "FP": 17420, + "IoU": 0.20134076529075023, + "TN": 1079368, + "TP": 5346, + "n_pred": 22766, + "n_ref": 9132 + }, + "2": { + "Dice": 0.7240552098181692, + "FN": 1069, + "FP": 6868, + "IoU": 0.5674659400544959, + "TN": 1087570, + "TP": 10413, + "n_pred": 17281, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8937476026083621, + "FN": 1011, + "FP": 1482, + "IoU": 0.8079056865464632, + "TN": 1092942, + "TP": 10485, + "n_pred": 11967, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.16721425534382126, + "FN": 889, + "FP": 20656, + "IoU": 0.09123502615151004, + "TN": 1082212, + "TP": 2163, + "n_pred": 22819, + "n_ref": 3052 + }, + "2": { + "Dice": 0.753614437623696, + "FN": 1119, + "FP": 6226, + "IoU": 0.604639896651954, + "TN": 1087342, + "TP": 11233, + "n_pred": 17459, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7556995141397782, + "FN": 247, + "FP": 1714, + "IoU": 0.6073287945534641, + "TN": 1100926, + "TP": 3033, + "n_pred": 4747, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6404404723906798, + "FN": 1138, + "FP": 7874, + "IoU": 0.47106467895292875, + "TN": 1129842, + "TP": 8026, + "n_pred": 15900, + "n_ref": 9164 + }, + "2": { + "Dice": 0.7928253985150491, + "FN": 4520, + "FP": 3265, + "IoU": 0.6567611657334332, + "TN": 1124199, + "TP": 14896, + "n_pred": 18161, + "n_ref": 19416 + }, + "3": { + "Dice": 0.8932221308586867, + "FN": 524, + "FP": 2203, + "IoU": 0.807047336022076, + "TN": 1132747, + "TP": 11406, + "n_pred": 13609, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.22878944645628557, + "FN": 697, + "FP": 11229, + "IoU": 0.12917123037604966, + "TN": 1133185, + "TP": 1769, + "n_pred": 12998, + "n_ref": 2466 + }, + "2": { + "Dice": 0.40426856380613607, + "FN": 15344, + "FP": 11452, + "IoU": 0.2533437360677664, + "TN": 1110992, + "TP": 9092, + "n_pred": 20544, + "n_ref": 24436 + }, + "3": { + "Dice": 0.2496438255434533, + "FN": 0, + "FP": 16327, + "IoU": 0.1426245864622171, + "TN": 1127837, + "TP": 2716, + "n_pred": 19043, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8624487498995096, + "FN": 1118, + "FP": 2304, + "IoU": 0.7581625441696113, + "TN": 786650, + "TP": 10728, + "n_pred": 13032, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8272367908245644, + "FN": 1205, + "FP": 1898, + "IoU": 0.705374097987087, + "TN": 790268, + "TP": 7429, + "n_pred": 9327, + "n_ref": 8634 + }, + "3": { + "Dice": 0.94029590948651, + "FN": 550, + "FP": 479, + "IoU": 0.8873193166885677, + "TN": 791668, + "TP": 8103, + "n_pred": 8582, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49629786333826953, + "FN": 420, + "FP": 6723, + "IoU": 0.3300506471581317, + "TN": 790138, + "TP": 3519, + "n_pred": 10242, + "n_ref": 3939 + }, + "2": { + "Dice": 0.7708244422890398, + "FN": 2718, + "FP": 3189, + "IoU": 0.6271068745659997, + "TN": 784959, + "TP": 9934, + "n_pred": 13123, + "n_ref": 12652 + }, + "3": { + "Dice": 0.5570264765784114, + "FN": 111, + "FP": 4239, + "IoU": 0.3860268172194778, + "TN": 793715, + "TP": 2735, + "n_pred": 6974, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7097020402172317, + "FN": 2104, + "FP": 7785, + "IoU": 0.5500295763753015, + "TN": 1325863, + "TP": 12088, + "n_pred": 19873, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8308003162610911, + "FN": 1149, + "FP": 2703, + "IoU": 0.7105717935231798, + "TN": 1334531, + "TP": 9457, + "n_pred": 12160, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9506772589586786, + "FN": 694, + "FP": 1032, + "IoU": 0.9059912854030501, + "TN": 1329480, + "TP": 16634, + "n_pred": 17666, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.457913593256059, + "FN": 436, + "FP": 12425, + "IoU": 0.2969441863007708, + "TN": 1329547, + "TP": 5432, + "n_pred": 17857, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8148828663298117, + "FN": 1470, + "FP": 3366, + "IoU": 0.6875968992248062, + "TN": 1332360, + "TP": 10644, + "n_pred": 14010, + "n_ref": 12114 + }, + "3": { + "Dice": 0.8854630856316994, + "FN": 590, + "FP": 2263, + "IoU": 0.7944672574022045, + "TN": 1333959, + "TP": 11028, + "n_pred": 13291, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.78332350339133, + "FN": 1837, + "FP": 4041, + "IoU": 0.6438223353329697, + "TN": 835465, + "TP": 10625, + "n_pred": 14666, + "n_ref": 12462 + }, + "2": { + "Dice": 0.7828312089609888, + "FN": 1341, + "FP": 3157, + "IoU": 0.6431574771915907, + "TN": 839363, + "TP": 8107, + "n_pred": 11264, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9350017379214459, + "FN": 1003, + "FP": 1428, + "IoU": 0.8779373368146214, + "TN": 832052, + "TP": 17485, + "n_pred": 18913, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6255793816533388, + "FN": 797, + "FP": 6554, + "IoU": 0.4551586125111177, + "TN": 838476, + "TP": 6141, + "n_pred": 12695, + "n_ref": 6938 + }, + "2": { + "Dice": 0.7891173626003952, + "FN": 1909, + "FP": 3106, + "IoU": 0.6516877344075566, + "TN": 837570, + "TP": 9383, + "n_pred": 12489, + "n_ref": 11292 + }, + "3": { + "Dice": 0.8575958489478236, + "FN": 1096, + "FP": 2856, + "IoU": 0.750693918748423, + "TN": 836116, + "TP": 11900, + "n_pred": 14756, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.608095040751485, + "FN": 1454, + "FP": 4220, + "IoU": 0.4368797141722906, + "TN": 841892, + "TP": 4402, + "n_pred": 8622, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8065662994337883, + "FN": 1532, + "FP": 2875, + "IoU": 0.6758367046708349, + "TN": 838373, + "TP": 9188, + "n_pred": 12063, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9125884251023869, + "FN": 1926, + "FP": 187, + "IoU": 0.8392300083694743, + "TN": 838825, + "TP": 11030, + "n_pred": 11217, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3083294983893235, + "FN": 429, + "FP": 7086, + "IoU": 0.1822633297062024, + "TN": 842778, + "TP": 1675, + "n_pred": 8761, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8386375033753809, + "FN": 1716, + "FP": 2467, + "IoU": 0.7221151929847871, + "TN": 836915, + "TP": 10870, + "n_pred": 13337, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9242467884094706, + "FN": 724, + "FP": 591, + "IoU": 0.8591624718860448, + "TN": 842631, + "TP": 8022, + "n_pred": 8613, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4840026062206372, + "FN": 6031, + "FP": 9016, + "IoU": 0.3192634817227651, + "TN": 774936, + "TP": 7057, + "n_pred": 16073, + "n_ref": 13088 + }, + "2": { + "Dice": 0.5937040065412919, + "FN": 1593, + "FP": 8345, + "IoU": 0.4221757078899936, + "TN": 779841, + "TP": 7261, + "n_pred": 15606, + "n_ref": 8854 + }, + "3": { + "Dice": 0.7796402157413688, + "FN": 1388, + "FP": 5435, + "IoU": 0.6388609537924099, + "TN": 778147, + "TP": 12070, + "n_pred": 17505, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3190734001952605, + "FN": 4073, + "FP": 11271, + "IoU": 0.1898199482549237, + "TN": 778101, + "TP": 3595, + "n_pred": 14866, + "n_ref": 7668 + }, + "2": { + "Dice": 0.643977205737866, + "FN": 1429, + "FP": 7630, + "IoU": 0.47490146070020867, + "TN": 779788, + "TP": 8193, + "n_pred": 15823, + "n_ref": 9622 + }, + "3": { + "Dice": 0.6869528261793455, + "FN": 950, + "FP": 6416, + "IoU": 0.5231745209735889, + "TN": 781592, + "TP": 8082, + "n_pred": 14498, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6118042899200897, + "FN": 1558, + "FP": 12287, + "IoU": 0.440719046657241, + "TN": 871915, + "TP": 10910, + "n_pred": 23197, + "n_ref": 12468 + }, + "2": { + "Dice": 0.6947434800234223, + "FN": 2626, + "FP": 4151, + "IoU": 0.532265856856926, + "TN": 882181, + "TP": 7712, + "n_pred": 11863, + "n_ref": 10338 + }, + "3": { + "Dice": 0.8970456580125336, + "FN": 228, + "FP": 2532, + "IoU": 0.8133116883116883, + "TN": 881886, + "TP": 12024, + "n_pred": 14556, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4083942632170979, + "FN": 547, + "FP": 16283, + "IoU": 0.25659260568046294, + "TN": 874031, + "TP": 5809, + "n_pred": 22092, + "n_ref": 6356 + }, + "2": { + "Dice": 0.7544998163340272, + "FN": 2275, + "FP": 3740, + "IoU": 0.6057805741250492, + "TN": 881412, + "TP": 9243, + "n_pred": 12983, + "n_ref": 11518 + }, + "3": { + "Dice": 0.8992719082290085, + "FN": 242, + "FP": 1681, + "IoU": 0.8169791567526411, + "TN": 886163, + "TP": 8584, + "n_pred": 10265, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7541990381058084, + "FN": 1027, + "FP": 5617, + "IoU": 0.6053928847181802, + "TN": 745211, + "TP": 10193, + "n_pred": 15810, + "n_ref": 11220 + }, + "2": { + "Dice": 0.863444305149278, + "FN": 1114, + "FP": 1827, + "IoU": 0.7597025900808889, + "TN": 749809, + "TP": 9298, + "n_pred": 11125, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9361702127659575, + "FN": 268, + "FP": 1298, + "IoU": 0.88, + "TN": 748998, + "TP": 11484, + "n_pred": 12782, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4063667183818882, + "FN": 256, + "FP": 10075, + "IoU": 0.2549938703396553, + "TN": 748181, + "TP": 3536, + "n_pred": 13611, + "n_ref": 3792 + }, + "2": { + "Dice": 0.7812081626029453, + "FN": 2004, + "FP": 3389, + "IoU": 0.6409693096331802, + "TN": 747027, + "TP": 9628, + "n_pred": 13017, + "n_ref": 11632 + }, + "3": { + "Dice": 0.7839293277666848, + "FN": 356, + "FP": 3215, + "IoU": 0.6446412578366006, + "TN": 751999, + "TP": 6478, + "n_pred": 9693, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.45112689481290164, + "FN": 606, + "FP": 17245, + "IoU": 0.2912613649898757, + "TN": 970141, + "TP": 7336, + "n_pred": 24581, + "n_ref": 7942 + }, + "2": { + "Dice": 0.6264290953017818, + "FN": 1488, + "FP": 7171, + "IoU": 0.4560587976631698, + "TN": 979409, + "TP": 7260, + "n_pred": 14431, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9370274203212828, + "FN": 126, + "FP": 2081, + "IoU": 0.8815160788103291, + "TN": 976701, + "TP": 16420, + "n_pred": 18501, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.21627502175805047, + "FN": 260, + "FP": 21352, + "IoU": 0.12124908514271773, + "TN": 970734, + "TP": 2982, + "n_pred": 24334, + "n_ref": 3242 + }, + "2": { + "Dice": 0.6513631156930126, + "FN": 1226, + "FP": 6383, + "IoU": 0.4829788679758103, + "TN": 980611, + "TP": 7108, + "n_pred": 13491, + "n_ref": 8334 + }, + "3": { + "Dice": 0.7979578618508782, + "FN": 142, + "FP": 5161, + "IoU": 0.6638351822503962, + "TN": 979553, + "TP": 10472, + "n_pred": 15633, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.907608695652174, + "FN": 1131, + "FP": 1555, + "IoU": 0.8308457711442786, + "TN": 742137, + "TP": 13193, + "n_pred": 14748, + "n_ref": 14324 + }, + "2": { + "Dice": 0.7933678756476684, + "FN": 1156, + "FP": 2832, + "IoU": 0.6575060116798351, + "TN": 746372, + "TP": 7656, + "n_pred": 10488, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9529553679131484, + "FN": 242, + "FP": 850, + "IoU": 0.9101382488479263, + "TN": 745864, + "TP": 11060, + "n_pred": 11910, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5581231257717411, + "FN": 490, + "FP": 7025, + "IoU": 0.38708098850012235, + "TN": 745755, + "TP": 4746, + "n_pred": 11771, + "n_ref": 5236 + }, + "2": { + "Dice": 0.7190293150558051, + "FN": 1569, + "FP": 4498, + "IoU": 0.5613159797541576, + "TN": 744186, + "TP": 7763, + "n_pred": 12261, + "n_ref": 9332 + }, + "3": { + "Dice": 0.7072645739910314, + "FN": 249, + "FP": 3015, + "IoU": 0.5471069793256557, + "TN": 750809, + "TP": 3943, + "n_pred": 6958, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6746047831374139, + "FN": 1289, + "FP": 5133, + "IoU": 0.5089838672681397, + "TN": 625897, + "TP": 6657, + "n_pred": 11790, + "n_ref": 7946 + }, + "2": { + "Dice": 0.5844748858447488, + "FN": 502, + "FP": 6414, + "IoU": 0.4129032258064516, + "TN": 627196, + "TP": 4864, + "n_pred": 11278, + "n_ref": 5366 + }, + "3": { + "Dice": 0.65732832251452, + "FN": 600, + "FP": 6421, + "IoU": 0.4895674300254453, + "TN": 625221, + "TP": 6734, + "n_pred": 13155, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.38745512429722956, + "FN": 160, + "FP": 8883, + "IoU": 0.2402755607829959, + "TN": 627073, + "TP": 2860, + "n_pred": 11743, + "n_ref": 3020 + }, + "2": { + "Dice": 0.7287162705863419, + "FN": 560, + "FP": 4497, + "IoU": 0.5732129293611276, + "TN": 627127, + "TP": 6792, + "n_pred": 11289, + "n_ref": 7352 + }, + "3": { + "Dice": 0.3809805079740106, + "FN": 176, + "FP": 8208, + "IoU": 0.2353155782561109, + "TN": 628012, + "TP": 2580, + "n_pred": 10788, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5553568188298728, + "FN": 4728, + "FP": 12425, + "IoU": 0.3844249057958012, + "TN": 955175, + "TP": 10712, + "n_pred": 23137, + "n_ref": 15440 + }, + "2": { + "Dice": 0.778149386845039, + "FN": 1171, + "FP": 3804, + "IoU": 0.6368613138686131, + "TN": 969340, + "TP": 8725, + "n_pred": 12529, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9679520390792687, + "FN": 140, + "FP": 726, + "IoU": 0.9378944348823867, + "TN": 969096, + "TP": 13078, + "n_pred": 13804, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3998914181564354, + "FN": 1032, + "FP": 14443, + "IoU": 0.24991517619116863, + "TN": 962409, + "TP": 5156, + "n_pred": 19599, + "n_ref": 6188 + }, + "2": { + "Dice": 0.7411661995129348, + "FN": 1891, + "FP": 3742, + "IoU": 0.5887720835158418, + "TN": 969342, + "TP": 8065, + "n_pred": 11807, + "n_ref": 9956 + }, + "3": { + "Dice": 0.5507451424259574, + "FN": 151, + "FP": 9375, + "IoU": 0.3800195248942402, + "TN": 967675, + "TP": 5839, + "n_pred": 15214, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8603534323111208, + "FN": 2475, + "FP": 1974, + "IoU": 0.7549300429657376, + "TN": 1030422, + "TP": 13705, + "n_pred": 15679, + "n_ref": 16180 + }, + "2": { + "Dice": 0.7144265527440026, + "FN": 1099, + "FP": 4984, + "IoU": 0.5557259713701431, + "TN": 1034884, + "TP": 7609, + "n_pred": 12593, + "n_ref": 8708 + }, + "3": { + "Dice": 0.8934661741109743, + "FN": 288, + "FP": 2567, + "IoU": 0.8074458757671815, + "TN": 1033749, + "TP": 11972, + "n_pred": 14539, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.561671707451196, + "FN": 323, + "FP": 7648, + "IoU": 0.3905031350359382, + "TN": 1035498, + "TP": 5107, + "n_pred": 12755, + "n_ref": 5430 + }, + "2": { + "Dice": 0.6892807576128663, + "FN": 1879, + "FP": 5733, + "IoU": 0.5258797882279663, + "TN": 1032521, + "TP": 8443, + "n_pred": 14176, + "n_ref": 10322 + }, + "3": { + "Dice": 0.5833736689254598, + "FN": 259, + "FP": 6627, + "IoU": 0.4118049030494576, + "TN": 1036869, + "TP": 4821, + "n_pred": 11448, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5357106812447435, + "FN": 3200, + "FP": 10601, + "IoU": 0.3658502963745807, + "TN": 467453, + "TP": 7962, + "n_pred": 18563, + "n_ref": 11162 + }, + "2": { + "Dice": 0.42200898325847286, + "FN": 650, + "FP": 5012, + "IoU": 0.2674343382067538, + "TN": 481487, + "TP": 2067, + "n_pred": 7079, + "n_ref": 2717 + }, + "3": { + "Dice": 0.8936597110754414, + "FN": 197, + "FP": 863, + "IoU": 0.8077620602103736, + "TN": 483702, + "TP": 4454, + "n_pred": 5317, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42317133038782523, + "FN": 1479, + "FP": 12621, + "IoU": 0.2683686176836862, + "TN": 469944, + "TP": 5172, + "n_pred": 17793, + "n_ref": 6651 + }, + "2": { + "Dice": 0.5186170212765957, + "FN": 630, + "FP": 4438, + "IoU": 0.3500897666068223, + "TN": 481418, + "TP": 2730, + "n_pred": 7168, + "n_ref": 3360 + }, + "3": { + "Dice": 0.6262144821264894, + "FN": 82, + "FP": 1957, + "IoU": 0.4558313317320523, + "TN": 485469, + "TP": 1708, + "n_pred": 3665, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8112946793140272, + "FN": 2961, + "FP": 3047, + "IoU": 0.682502774401522, + "TN": 461557, + "TP": 12915, + "n_pred": 15962, + "n_ref": 15876 + }, + "2": { + "Dice": 0.5155033271980745, + "FN": 878, + "FP": 5966, + "IoU": 0.34725798760133525, + "TN": 469995, + "TP": 3641, + "n_pred": 9607, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9236694677871149, + "FN": 365, + "FP": 725, + "IoU": 0.8581652569941445, + "TN": 472795, + "TP": 6595, + "n_pred": 7320, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7634341706197993, + "FN": 1794, + "FP": 4290, + "IoU": 0.6173825545563172, + "TN": 464579, + "TP": 9817, + "n_pred": 14107, + "n_ref": 11611 + }, + "2": { + "Dice": 0.5490825099448223, + "FN": 1383, + "FP": 5645, + "IoU": 0.37843813566817014, + "TN": 469173, + "TP": 4279, + "n_pred": 9924, + "n_ref": 5662 + }, + "3": { + "Dice": 0.688265306122449, + "FN": 108, + "FP": 2336, + "IoU": 0.5246985608712563, + "TN": 475338, + "TP": 2698, + "n_pred": 5034, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.830131943904399, + "FN": 4660, + "FP": 1893, + "IoU": 0.7095945047640151, + "TN": 622075, + "TP": 16012, + "n_pred": 17905, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7130213681482568, + "FN": 1775, + "FP": 4094, + "IoU": 0.5540273556231003, + "TN": 631480, + "TP": 7291, + "n_pred": 11385, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9288807841349441, + "FN": 1773, + "FP": 99, + "IoU": 0.867205788465631, + "TN": 630543, + "TP": 12225, + "n_pred": 12324, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8442711575636447, + "FN": 2448, + "FP": 2305, + "IoU": 0.7305097238759426, + "TN": 627003, + "TP": 12884, + "n_pred": 15189, + "n_ref": 15332 + }, + "2": { + "Dice": 0.765630568204316, + "FN": 2498, + "FP": 3421, + "IoU": 0.6202604734714826, + "TN": 629053, + "TP": 9668, + "n_pred": 13089, + "n_ref": 12166 + }, + "3": { + "Dice": 0.8950866675355141, + "FN": 694, + "FP": 916, + "IoU": 0.8100967209247464, + "TN": 636162, + "TP": 6868, + "n_pred": 7784, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8348282241633685, + "FN": 4228, + "FP": 2825, + "IoU": 0.7164851067250875, + "TN": 539603, + "TP": 17824, + "n_pred": 20649, + "n_ref": 22052 + }, + "2": { + "Dice": 0.44005512172714745, + "FN": 1116, + "FP": 7417, + "IoU": 0.28209658421672557, + "TN": 552594, + "TP": 3353, + "n_pred": 10770, + "n_ref": 4469 + }, + "3": { + "Dice": 0.7171785028790787, + "FN": 424, + "FP": 5470, + "IoU": 0.5590633650033665, + "TN": 551113, + "TP": 7473, + "n_pred": 12943, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6537090181754935, + "FN": 915, + "FP": 7049, + "IoU": 0.48556294812996575, + "TN": 548999, + "TP": 7517, + "n_pred": 14566, + "n_ref": 8432 + }, + "2": { + "Dice": 0.5031149583579251, + "FN": 1027, + "FP": 6550, + "IoU": 0.33610794707789365, + "TN": 553067, + "TP": 3836, + "n_pred": 10386, + "n_ref": 4863 + }, + "3": { + "Dice": 0.4447634673229423, + "FN": 199, + "FP": 7923, + "IoU": 0.28597802197802197, + "TN": 553105, + "TP": 3253, + "n_pred": 11176, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6277187164732273, + "FN": 1139, + "FP": 6495, + "IoU": 0.4574271499644634, + "TN": 404810, + "TP": 6436, + "n_pred": 12931, + "n_ref": 7575 + }, + "2": { + "Dice": 0.25566887810674327, + "FN": 1565, + "FP": 5952, + "IoU": 0.14657129881925524, + "TN": 410072, + "TP": 1291, + "n_pred": 7243, + "n_ref": 2856 + }, + "3": { + "Dice": 0.7034459344763198, + "FN": 55, + "FP": 3439, + "IoU": 0.5425504058654098, + "TN": 411242, + "TP": 4144, + "n_pred": 7583, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5103879849812265, + "FN": 659, + "FP": 7165, + "IoU": 0.34263149050579733, + "TN": 406978, + "TP": 4078, + "n_pred": 11243, + "n_ref": 4737 + }, + "2": { + "Dice": 0.2849545756702858, + "FN": 1707, + "FP": 4747, + "IoU": 0.16614987080103358, + "TN": 411140, + "TP": 1286, + "n_pred": 6033, + "n_ref": 2993 + }, + "3": { + "Dice": 0.4943502824858757, + "FN": 283, + "FP": 4013, + "IoU": 0.32833020637898686, + "TN": 412484, + "TP": 2100, + "n_pred": 6113, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8599673800885398, + "FN": 648, + "FP": 3559, + "IoU": 0.7543357664233576, + "TN": 479385, + "TP": 12918, + "n_pred": 16477, + "n_ref": 13566 + }, + "2": { + "Dice": 0.6029682591268551, + "FN": 2106, + "FP": 5224, + "IoU": 0.43160669975186106, + "TN": 483614, + "TP": 5566, + "n_pred": 10790, + "n_ref": 7672 + }, + "3": { + "Dice": 0.8661335187760779, + "FN": 299, + "FP": 2011, + "IoU": 0.7638761116222018, + "TN": 486727, + "TP": 7473, + "n_pred": 9484, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8262898455471575, + "FN": 690, + "FP": 4596, + "IoU": 0.7039982080860119, + "TN": 478652, + "TP": 12572, + "n_pred": 17168, + "n_ref": 13262 + }, + "2": { + "Dice": 0.5690899847483477, + "FN": 2879, + "FP": 5597, + "IoU": 0.3977119306473389, + "TN": 482437, + "TP": 5597, + "n_pred": 11194, + "n_ref": 8476 + }, + "3": { + "Dice": 0.6111915972473742, + "FN": 25, + "FP": 4269, + "IoU": 0.4400834528621724, + "TN": 488841, + "TP": 3375, + "n_pred": 7644, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_001/summary_cross_val.json b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_001/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..a68af22381381c37c251842064856a1e8587a94c --- /dev/null +++ b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_001/summary_cross_val.json @@ -0,0 +1,3768 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8099193479541426, + "FN": 25.150000000000002, + "FP": 12.6, + "IoU": 0.7415138304629575, + "TN": 851.3333333333334, + "TP": 150.91666666666666, + "n_pred": 163.51666666666668, + "n_ref": 176.0666666666667 + }, + "mean": { + "1": { + "Dice": 0.6294015647619873, + "FN": 44.8, + "FP": 17.35, + "IoU": 0.57974050347409, + "TN": 781.15, + "TP": 196.7, + "n_pred": 214.05, + "n_ref": 241.5 + }, + "2": { + "Dice": 0.8778594199249913, + "FN": 14.1, + "FP": 16.4, + "IoU": 0.786122628748819, + "TN": 881.6, + "TP": 127.9, + "n_pred": 144.3, + "n_ref": 142.0 + }, + "3": { + "Dice": 0.9224970591754489, + "FN": 16.55, + "FP": 4.05, + "IoU": 0.8586783591659636, + "TN": 891.25, + "TP": 128.15, + "n_pred": 132.2, + "n_ref": 144.7 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8210526315789474, + "FN": 4, + "FP": 13, + "IoU": 0.6964285714285714, + "TN": 744, + "TP": 39, + "n_pred": 52, + "n_ref": 43 + }, + "2": { + "Dice": 0.919175911251981, + "FN": 36, + "FP": 15, + "IoU": 0.8504398826979472, + "TN": 459, + "TP": 290, + "n_pred": 305, + "n_ref": 326 + }, + "3": { + "Dice": 0.8862275449101796, + "FN": 15, + "FP": 4, + "IoU": 0.7956989247311828, + "TN": 707, + "TP": 74, + "n_pred": 78, + "n_ref": 89 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 39, + "IoU": 0.0, + "TN": 1561, + "TP": 0, + "n_pred": 39, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8938775510204081, + "FN": 9, + "FP": 43, + "IoU": 0.8081180811808119, + "TN": 529, + "TP": 219, + "n_pred": 262, + "n_ref": 228 + }, + "3": { + "Dice": 0.9605911330049262, + "FN": 27, + "FP": 5, + "IoU": 0.9241706161137441, + "TN": 378, + "TP": 390, + "n_pred": 395, + "n_ref": 417 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.23990498812351543, + "FN": 637, + "FP": 3, + "IoU": 0.13630229419703105, + "TN": 859, + "TP": 101, + "n_pred": 104, + "n_ref": 738 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9846678023850085, + "FN": 18, + "FP": 0, + "IoU": 0.9697986577181208, + "TN": 204, + "TP": 578, + "n_pred": 578, + "n_ref": 596 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9514792899408284, + "FN": 32, + "FP": 9, + "IoU": 0.90744920993228, + "TN": 1157, + "TP": 402, + "n_pred": 411, + "n_ref": 434 + }, + "2": { + "Dice": 0.7703703703703704, + "FN": 0, + "FP": 31, + "IoU": 0.6265060240963856, + "TN": 1517, + "TP": 52, + "n_pred": 83, + "n_ref": 52 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.930635838150289, + "FN": 26, + "FP": 22, + "IoU": 0.8702702702702703, + "TN": 1230, + "TP": 322, + "n_pred": 344, + "n_ref": 348 + }, + "2": { + "Dice": 0.906636670416198, + "FN": 72, + "FP": 11, + "IoU": 0.8292181069958847, + "TN": 1114, + "TP": 403, + "n_pred": 414, + "n_ref": 475 + }, + "3": { + "Dice": 0.9295352323838081, + "FN": 11, + "FP": 36, + "IoU": 0.8683473389355743, + "TN": 1243, + "TP": 310, + "n_pred": 346, + "n_ref": 321 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "2": { + "Dice": 0.9156293222683264, + "FN": 33, + "FP": 28, + "IoU": 0.8443877551020408, + "TN": 408, + "TP": 331, + "n_pred": 359, + "n_ref": 364 + }, + "3": { + "Dice": 0.9560283687943263, + "FN": 25, + "FP": 6, + "IoU": 0.9157608695652174, + "TN": 432, + "TP": 337, + "n_pred": 343, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8683812405446294, + "FN": 52, + "FP": 35, + "IoU": 0.767379679144385, + "TN": 426, + "TP": 287, + "n_pred": 322, + "n_ref": 339 + }, + "2": { + "Dice": 0.9021406727828746, + "FN": 24, + "FP": 40, + "IoU": 0.8217270194986073, + "TN": 441, + "TP": 295, + "n_pred": 335, + "n_ref": 319 + }, + "3": { + "Dice": 0.8378378378378378, + "FN": 24, + "FP": 0, + "IoU": 0.7209302325581395, + "TN": 714, + "TP": 62, + "n_pred": 62, + "n_ref": 86 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9706546275395034, + "FN": 2, + "FP": 24, + "IoU": 0.9429824561403509, + "TN": 344, + "TP": 430, + "n_pred": 454, + "n_ref": 432 + }, + "2": { + "Dice": 0.9018567639257294, + "FN": 24, + "FP": 13, + "IoU": 0.821256038647343, + "TN": 593, + "TP": 170, + "n_pred": 183, + "n_ref": 194 + }, + "3": { + "Dice": 0.9673590504451038, + "FN": 11, + "FP": 0, + "IoU": 0.9367816091954023, + "TN": 626, + "TP": 163, + "n_pred": 163, + "n_ref": 174 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7913669064748201, + "FN": 13, + "FP": 16, + "IoU": 0.6547619047619048, + "TN": 716, + "TP": 55, + "n_pred": 71, + "n_ref": 68 + }, + "3": { + "Dice": 0.8870356330553449, + "FN": 141, + "FP": 8, + "IoU": 0.7970027247956403, + "TN": 66, + "TP": 585, + "n_pred": 593, + "n_ref": 726 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9309734513274336, + "FN": 78, + "FP": 0, + "IoU": 0.8708609271523179, + "TN": 996, + "TP": 526, + "n_pred": 526, + "n_ref": 604 + }, + "2": { + "Dice": 0.9055374592833876, + "FN": 9, + "FP": 20, + "IoU": 0.8273809523809523, + "TN": 1432, + "TP": 139, + "n_pred": 159, + "n_ref": 148 + }, + "3": { + "Dice": 0.9142857142857143, + "FN": 0, + "FP": 9, + "IoU": 0.8421052631578947, + "TN": 1543, + "TP": 48, + "n_pred": 57, + "n_ref": 48 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9318181818181818, + "FN": 14, + "FP": 22, + "IoU": 0.8723404255319149, + "TN": 518, + "TP": 246, + "n_pred": 268, + "n_ref": 260 + }, + "3": { + "Dice": 0.9312977099236641, + "FN": 17, + "FP": 10, + "IoU": 0.8714285714285714, + "TN": 590, + "TP": 183, + "n_pred": 193, + "n_ref": 200 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8731942215088283, + "FN": 0, + "FP": 79, + "IoU": 0.7749287749287749, + "TN": 449, + "TP": 272, + "n_pred": 351, + "n_ref": 272 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9684400360685302, + "FN": 21, + "FP": 14, + "IoU": 0.9388111888111889, + "TN": 228, + "TP": 537, + "n_pred": 551, + "n_ref": 558 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 8, + "IoU": 0.0, + "TN": 786, + "TP": 0, + "n_pred": 8, + "n_ref": 6 + }, + "2": { + "Dice": 0.8031496062992126, + "FN": 46, + "FP": 54, + "IoU": 0.6710526315789473, + "TN": 496, + "TP": 204, + "n_pred": 258, + "n_ref": 250 + }, + "3": { + "Dice": 0.9019607843137255, + "FN": 54, + "FP": 1, + "IoU": 0.8214285714285714, + "TN": 492, + "TP": 253, + "n_pred": 254, + "n_ref": 307 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9016393442622951, + "FN": 20, + "FP": 76, + "IoU": 0.8208955223880597, + "TN": 1064, + "TP": 440, + "n_pred": 516, + "n_ref": 460 + }, + "2": { + "Dice": 0.8927536231884058, + "FN": 2, + "FP": 35, + "IoU": 0.806282722513089, + "TN": 1409, + "TP": 154, + "n_pred": 189, + "n_ref": 156 + }, + "3": { + "Dice": 0.9753086419753086, + "FN": 6, + "FP": 2, + "IoU": 0.9518072289156626, + "TN": 1434, + "TP": 158, + "n_pred": 160, + "n_ref": 164 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 22, + "IoU": 0.0, + "TN": 778, + "TP": 0, + "n_pred": 22, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient095_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.6573010057126152, + "FN": 23.083333333333332, + "FP": 26.216666666666665, + "IoU": 0.5867255741058971, + "TN": 829.7666666666668, + "TP": 120.93333333333334, + "n_pred": 147.15, + "n_ref": 144.01666666666665 + }, + "mean": { + "1": { + "Dice": 0.36380553169379054, + "FN": 24.65, + "FP": 45.4, + "IoU": 0.32051144656262925, + "TN": 816.85, + "TP": 113.1, + "n_pred": 158.5, + "n_ref": 137.75 + }, + "2": { + "Dice": 0.7530642581247343, + "FN": 20.75, + "FP": 29.95, + "IoU": 0.6400505808893068, + "TN": 846.4, + "TP": 102.9, + "n_pred": 132.85, + "n_ref": 123.65 + }, + "3": { + "Dice": 0.8550332273193207, + "FN": 23.85, + "FP": 3.3, + "IoU": 0.7996146948657553, + "TN": 826.05, + "TP": 146.8, + "n_pred": 150.1, + "n_ref": 170.65 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8173913043478261, + "FN": 57, + "FP": 27, + "IoU": 0.6911764705882353, + "TN": 1328, + "TP": 188, + "n_pred": 215, + "n_ref": 245 + }, + "3": { + "Dice": 0.9502262443438914, + "FN": 10, + "FP": 1, + "IoU": 0.9051724137931034, + "TN": 1484, + "TP": 105, + "n_pred": 106, + "n_ref": 115 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.88, + "FN": 30, + "FP": 36, + "IoU": 0.7857142857142857, + "TN": 492, + "TP": 242, + "n_pred": 278, + "n_ref": 272 + }, + "3": { + "Dice": 0.9210526315789473, + "FN": 26, + "FP": 22, + "IoU": 0.8536585365853658, + "TN": 472, + "TP": 280, + "n_pred": 302, + "n_ref": 306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7855297157622739, + "FN": 0, + "FP": 83, + "IoU": 0.6468085106382979, + "TN": 1365, + "TP": 152, + "n_pred": 235, + "n_ref": 152 + }, + "3": { + "Dice": 0.9181969949916527, + "FN": 98, + "FP": 0, + "IoU": 0.8487654320987654, + "TN": 952, + "TP": 550, + "n_pred": 550, + "n_ref": 648 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": 0.772093023255814, + "FN": 0, + "FP": 98, + "IoU": 0.6287878787878788, + "TN": 536, + "TP": 166, + "n_pred": 264, + "n_ref": 166 + }, + "3": { + "Dice": 0.8217821782178217, + "FN": 72, + "FP": 0, + "IoU": 0.6974789915966386, + "TN": 562, + "TP": 166, + "n_pred": 166, + "n_ref": 238 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 90, + "FP": 1, + "IoU": 0.0, + "TN": 709, + "TP": 0, + "n_pred": 1, + "n_ref": 90 + }, + "2": { + "Dice": 0.759825327510917, + "FN": 19, + "FP": 146, + "IoU": 0.6126760563380281, + "TN": 374, + "TP": 261, + "n_pred": 407, + "n_ref": 280 + }, + "3": { + "Dice": 0.9262295081967213, + "FN": 22, + "FP": 14, + "IoU": 0.8625954198473282, + "TN": 538, + "TP": 226, + "n_pred": 240, + "n_ref": 248 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 795, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + }, + "2": { + "Dice": 0.7155963302752294, + "FN": 7, + "FP": 55, + "IoU": 0.5571428571428572, + "TN": 660, + "TP": 78, + "n_pred": 133, + "n_ref": 85 + }, + "3": { + "Dice": 0.9342560553633218, + "FN": 31, + "FP": 7, + "IoU": 0.8766233766233766, + "TN": 492, + "TP": 270, + "n_pred": 277, + "n_ref": 301 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8181818181818182, + "FN": 33, + "FP": 27, + "IoU": 0.6923076923076923, + "TN": 1405, + "TP": 135, + "n_pred": 162, + "n_ref": 168 + }, + "3": { + "Dice": 0.975973487986744, + "FN": 27, + "FP": 2, + "IoU": 0.9530744336569579, + "TN": 982, + "TP": 589, + "n_pred": 591, + "n_ref": 616 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 453, + "IoU": 0.0, + "TN": 347, + "TP": 0, + "n_pred": 453, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7111984282907662, + "FN": 147, + "FP": 0, + "IoU": 0.551829268292683, + "TN": 472, + "TP": 181, + "n_pred": 181, + "n_ref": 328 + }, + "2": { + "Dice": 0.9090909090909091, + "FN": 12, + "FP": 28, + "IoU": 0.8333333333333334, + "TN": 560, + "TP": 200, + "n_pred": 228, + "n_ref": 212 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 676, + "TP": 124, + "n_pred": 124, + "n_ref": 124 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8375451263537906, + "FN": 2, + "FP": 43, + "IoU": 0.7204968944099379, + "TN": 639, + "TP": 116, + "n_pred": 159, + "n_ref": 118 + }, + "3": { + "Dice": 0.8709677419354839, + "FN": 16, + "FP": 0, + "IoU": 0.7714285714285715, + "TN": 730, + "TP": 54, + "n_pred": 54, + "n_ref": 70 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 795, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9699157641395909, + "FN": 19, + "FP": 6, + "IoU": 0.9415887850467289, + "TN": 372, + "TP": 403, + "n_pred": 409, + "n_ref": 422 + }, + "2": { + "Dice": 0.9161676646706587, + "FN": 9, + "FP": 19, + "IoU": 0.8453038674033149, + "TN": 619, + "TP": 153, + "n_pred": 172, + "n_ref": 162 + }, + "3": { + "Dice": 0.9743589743589743, + "FN": 8, + "FP": 2, + "IoU": 0.95, + "TN": 600, + "TP": 190, + "n_pred": 192, + "n_ref": 198 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4720496894409938, + "FN": 183, + "FP": 157, + "IoU": 0.3089430894308943, + "TN": 308, + "TP": 152, + "n_pred": 309, + "n_ref": 335 + }, + "2": { + "Dice": 0.022222222222222223, + "FN": 88, + "FP": 0, + "IoU": 0.011235955056179775, + "TN": 711, + "TP": 1, + "n_pred": 1, + "n_ref": 89 + }, + "3": { + "Dice": 0.0, + "FN": 131, + "FP": 0, + "IoU": 0.0, + "TN": 669, + "TP": 0, + "n_pred": 0, + "n_ref": 131 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 47, + "IoU": 0.0, + "TN": 753, + "TP": 0, + "n_pred": 47, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8865882352941177, + "FN": 30, + "FP": 211, + "IoU": 0.7962806424344886, + "TN": 417, + "TP": 942, + "n_pred": 1153, + "n_ref": 972 + }, + "2": { + "Dice": 0.6780487804878049, + "FN": 130, + "FP": 2, + "IoU": 0.5129151291512916, + "TN": 1329, + "TP": 139, + "n_pred": 141, + "n_ref": 269 + }, + "3": { + "Dice": 0.8831168831168831, + "FN": 1, + "FP": 8, + "IoU": 0.7906976744186046, + "TN": 1557, + "TP": 34, + "n_pred": 42, + "n_ref": 35 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9621087314662273, + "FN": 24, + "FP": 22, + "IoU": 0.926984126984127, + "TN": 970, + "TP": 584, + "n_pred": 606, + "n_ref": 608 + }, + "2": { + "Dice": 0.8781431334622823, + "FN": 28, + "FP": 35, + "IoU": 0.7827586206896552, + "TN": 1310, + "TP": 227, + "n_pred": 262, + "n_ref": 255 + }, + "3": { + "Dice": 0.9392712550607287, + "FN": 35, + "FP": 10, + "IoU": 0.8854961832061069, + "TN": 1207, + "TP": 348, + "n_pred": 358, + "n_ref": 383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient099_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8047869953529987, + "FN": 16.333333333333336, + "FP": 14.789473684210526, + "IoU": 0.721553863120783, + "TN": 726.5263157894736, + "TP": 126.56140350877195, + "n_pred": 141.35087719298247, + "n_ref": 142.89473684210526 + }, + "mean": { + "1": { + "Dice": 0.6769781112070395, + "FN": 9.894736842105264, + "FP": 12.578947368421053, + "IoU": 0.5874645273989684, + "TN": 797.3157894736842, + "TP": 64.42105263157895, + "n_pred": 77.0, + "n_ref": 74.3157894736842 + }, + "2": { + "Dice": 0.8341330703069629, + "FN": 30.263157894736842, + "FP": 15.157894736842104, + "IoU": 0.7468332636932519, + "TN": 714.578947368421, + "TP": 124.21052631578948, + "n_pred": 139.3684210526316, + "n_ref": 154.47368421052633 + }, + "3": { + "Dice": 0.9032498045449936, + "FN": 8.842105263157896, + "FP": 16.63157894736842, + "IoU": 0.8303637982701286, + "TN": 667.6842105263158, + "TP": 191.05263157894737, + "n_pred": 207.68421052631578, + "n_ref": 199.89473684210526 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.3076923076923077, + "FN": 216, + "FP": 0, + "IoU": 0.18181818181818182, + "TN": 1336, + "TP": 48, + "n_pred": 48, + "n_ref": 264 + }, + "3": { + "Dice": 0.9386845039018952, + "FN": 0, + "FP": 165, + "IoU": 0.884453781512605, + "TN": 172, + "TP": 1263, + "n_pred": 1428, + "n_ref": 1263 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7604790419161677, + "FN": 84, + "FP": 76, + "IoU": 0.6135265700483091, + "TN": 386, + "TP": 254, + "n_pred": 330, + "n_ref": 338 + }, + "3": { + "Dice": 0.7954545454545454, + "FN": 72, + "FP": 0, + "IoU": 0.660377358490566, + "TN": 588, + "TP": 140, + "n_pred": 140, + "n_ref": 212 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 1588, + "TP": 12, + "n_pred": 12, + "n_ref": 12 + }, + "3": { + "Dice": 0.9936143039591315, + "FN": 10, + "FP": 0, + "IoU": 0.9873096446700508, + "TN": 812, + "TP": 778, + "n_pred": 778, + "n_ref": 788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6122448979591837, + "FN": 74, + "FP": 2, + "IoU": 0.4411764705882353, + "TN": 664, + "TP": 60, + "n_pred": 62, + "n_ref": 134 + }, + "2": { + "Dice": 0.9056603773584906, + "FN": 20, + "FP": 35, + "IoU": 0.8275862068965517, + "TN": 481, + "TP": 264, + "n_pred": 299, + "n_ref": 284 + }, + "3": { + "Dice": 0.9595015576323987, + "FN": 8, + "FP": 18, + "IoU": 0.9221556886227545, + "TN": 466, + "TP": 308, + "n_pred": 326, + "n_ref": 316 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9373368146214099, + "FN": 47, + "FP": 1, + "IoU": 0.8820638820638821, + "TN": 393, + "TP": 359, + "n_pred": 360, + "n_ref": 406 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9150141643059491, + "FN": 36, + "FP": 24, + "IoU": 0.8433420365535248, + "TN": 417, + "TP": 323, + "n_pred": 347, + "n_ref": 359 + }, + "3": { + "Dice": 0.9505582137161085, + "FN": 9, + "FP": 22, + "IoU": 0.9057750759878419, + "TN": 471, + "TP": 298, + "n_pred": 320, + "n_ref": 307 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.958974358974359, + "FN": 16, + "FP": 16, + "IoU": 0.9211822660098522, + "TN": 394, + "TP": 374, + "n_pred": 390, + "n_ref": 390 + }, + "3": { + "Dice": 0.9678456591639871, + "FN": 5, + "FP": 15, + "IoU": 0.9376947040498442, + "TN": 479, + "TP": 301, + "n_pred": 316, + "n_ref": 306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8642857142857143, + "FN": 46, + "FP": 30, + "IoU": 0.7610062893081762, + "TN": 482, + "TP": 242, + "n_pred": 272, + "n_ref": 288 + }, + "3": { + "Dice": 0.8952380952380953, + "FN": 9, + "FP": 46, + "IoU": 0.8103448275862069, + "TN": 510, + "TP": 235, + "n_pred": 281, + "n_ref": 244 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9779086892488954, + "FN": 22, + "FP": 8, + "IoU": 0.9567723342939481, + "TN": 106, + "TP": 664, + "n_pred": 672, + "n_ref": 686 + }, + "2": { + "Dice": 0.8792270531400966, + "FN": 7, + "FP": 18, + "IoU": 0.7844827586206896, + "TN": 684, + "TP": 91, + "n_pred": 109, + "n_ref": 98 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 187, + "IoU": 0.0, + "TN": 613, + "TP": 0, + "n_pred": 187, + "n_ref": 0 + }, + "2": { + "Dice": 0.9153605015673981, + "FN": 34, + "FP": 20, + "IoU": 0.8439306358381503, + "TN": 454, + "TP": 292, + "n_pred": 312, + "n_ref": 326 + }, + "3": { + "Dice": 0.7927927927927928, + "FN": 0, + "FP": 23, + "IoU": 0.6567164179104478, + "TN": 733, + "TP": 44, + "n_pred": 67, + "n_ref": 44 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7586206896551724, + "FN": 20, + "FP": 29, + "IoU": 0.6111111111111112, + "TN": 674, + "TP": 77, + "n_pred": 106, + "n_ref": 97 + }, + "2": { + "Dice": 0.7832167832167832, + "FN": 59, + "FP": 65, + "IoU": 0.6436781609195402, + "TN": 452, + "TP": 224, + "n_pred": 289, + "n_ref": 283 + }, + "3": { + "Dice": 0.8518518518518519, + "FN": 55, + "FP": 1, + "IoU": 0.7419354838709677, + "TN": 583, + "TP": 161, + "n_pred": 162, + "n_ref": 216 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7757575757575758, + "FN": 25, + "FP": 12, + "IoU": 0.6336633663366337, + "TN": 699, + "TP": 64, + "n_pred": 76, + "n_ref": 89 + }, + "2": { + "Dice": 0.8855534709193246, + "FN": 57, + "FP": 4, + "IoU": 0.7946127946127947, + "TN": 503, + "TP": 236, + "n_pred": 240, + "n_ref": 293 + }, + "3": { + "Dice": 0.8869565217391304, + "FN": 0, + "FP": 26, + "IoU": 0.796875, + "TN": 672, + "TP": 102, + "n_pred": 128, + "n_ref": 102 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.6630364212126827, + "FN": 11.894736842105262, + "FP": 26.684210526315784, + "IoU": 0.5909024896734104, + "TN": 798.3684210526316, + "TP": 131.47368421052633, + "n_pred": 158.15789473684208, + "n_ref": 143.36842105263156 + }, + "mean": { + "1": { + "Dice": 0.6301961859243556, + "FN": 14.263157894736842, + "FP": 38.473684210526315, + "IoU": 0.5601297800464279, + "TN": 762.2631578947369, + "TP": 153.42105263157896, + "n_pred": 191.89473684210526, + "n_ref": 167.68421052631578 + }, + "2": { + "Dice": 0.6400149535738722, + "FN": 18.0, + "FP": 27.210526315789473, + "IoU": 0.5518604817038862, + "TN": 812.3684210526316, + "TP": 110.84210526315789, + "n_pred": 138.05263157894737, + "n_ref": 128.8421052631579 + }, + "3": { + "Dice": 0.7188981241398202, + "FN": 3.4210526315789473, + "FP": 14.368421052631579, + "IoU": 0.660717207269917, + "TN": 820.4736842105264, + "TP": 130.1578947368421, + "n_pred": 144.52631578947367, + "n_ref": 133.57894736842104 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9221556886227545, + "FN": 8, + "FP": 18, + "IoU": 0.8555555555555555, + "TN": 1420, + "TP": 154, + "n_pred": 172, + "n_ref": 162 + }, + "2": { + "Dice": 0.9261083743842364, + "FN": 20, + "FP": 25, + "IoU": 0.8623853211009175, + "TN": 1273, + "TP": 282, + "n_pred": 307, + "n_ref": 302 + }, + "3": { + "Dice": 0.9915817456801064, + "FN": 17, + "FP": 2, + "IoU": 0.9833040421792618, + "TN": 462, + "TP": 1119, + "n_pred": 1121, + "n_ref": 1136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8592964824120602, + "FN": 18, + "FP": 38, + "IoU": 0.7533039647577092, + "TN": 573, + "TP": 171, + "n_pred": 209, + "n_ref": 189 + }, + "2": { + "Dice": 0.8351648351648352, + "FN": 56, + "FP": 19, + "IoU": 0.7169811320754716, + "TN": 535, + "TP": 190, + "n_pred": 209, + "n_ref": 246 + }, + "3": { + "Dice": 0.9099099099099099, + "FN": 19, + "FP": 1, + "IoU": 0.8347107438016529, + "TN": 679, + "TP": 101, + "n_pred": 102, + "n_ref": 120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5543478260869565, + "FN": 16, + "FP": 148, + "IoU": 0.38345864661654133, + "TN": 534, + "TP": 102, + "n_pred": 250, + "n_ref": 118 + }, + "3": { + "Dice": 0.8461538461538461, + "FN": 0, + "FP": 16, + "IoU": 0.7333333333333333, + "TN": 740, + "TP": 44, + "n_pred": 60, + "n_ref": 44 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.85995085995086, + "FN": 57, + "FP": 0, + "IoU": 0.7543103448275862, + "TN": 568, + "TP": 175, + "n_pred": 175, + "n_ref": 232 + }, + "3": { + "Dice": 0.984251968503937, + "FN": 0, + "FP": 12, + "IoU": 0.9689922480620154, + "TN": 413, + "TP": 375, + "n_pred": 387, + "n_ref": 375 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": 0.9331103678929766, + "FN": 10, + "FP": 30, + "IoU": 0.8746081504702194, + "TN": 481, + "TP": 279, + "n_pred": 309, + "n_ref": 289 + }, + "3": { + "Dice": 0.9719416386083053, + "FN": 19, + "FP": 6, + "IoU": 0.9454148471615721, + "TN": 342, + "TP": 433, + "n_pred": 439, + "n_ref": 452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5724137931034483, + "FN": 0, + "FP": 248, + "IoU": 0.40096618357487923, + "TN": 1186, + "TP": 166, + "n_pred": 414, + "n_ref": 166 + }, + "2": { + "Dice": 0.8864468864468864, + "FN": 30, + "FP": 1, + "IoU": 0.7960526315789473, + "TN": 1448, + "TP": 121, + "n_pred": 122, + "n_ref": 151 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 1598, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6331967213114754, + "FN": 22, + "FP": 336, + "IoU": 0.46326836581709147, + "TN": 933, + "TP": 309, + "n_pred": 645, + "n_ref": 331 + }, + "2": { + "Dice": 0.7272727272727273, + "FN": 19, + "FP": 185, + "IoU": 0.5714285714285714, + "TN": 1124, + "TP": 272, + "n_pred": 457, + "n_ref": 291 + }, + "3": { + "Dice": 0.6059479553903345, + "FN": 7, + "FP": 205, + "IoU": 0.43466666666666665, + "TN": 1225, + "TP": 163, + "n_pred": 368, + "n_ref": 170 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9270588235294117, + "FN": 0, + "FP": 62, + "IoU": 0.8640350877192983, + "TN": 344, + "TP": 394, + "n_pred": 456, + "n_ref": 394 + }, + "2": { + "Dice": 0.9058663028649386, + "FN": 67, + "FP": 2, + "IoU": 0.827930174563591, + "TN": 399, + "TP": 332, + "n_pred": 334, + "n_ref": 399 + }, + "3": { + "Dice": 0.6666666666666666, + "FN": 2, + "FP": 3, + "IoU": 0.5, + "TN": 790, + "TP": 5, + "n_pred": 8, + "n_ref": 7 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 789, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 31, + "IoU": 0.0, + "TN": 769, + "TP": 0, + "n_pred": 31, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 789, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 793, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 789, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8102893890675241, + "FN": 110, + "FP": 8, + "IoU": 0.6810810810810811, + "TN": 430, + "TP": 252, + "n_pred": 260, + "n_ref": 362 + }, + "2": { + "Dice": 0.7346938775510204, + "FN": 60, + "FP": 5, + "IoU": 0.5806451612903226, + "TN": 645, + "TP": 90, + "n_pred": 95, + "n_ref": 150 + }, + "3": { + "Dice": 0.9700996677740864, + "FN": 0, + "FP": 9, + "IoU": 0.9419354838709677, + "TN": 645, + "TP": 146, + "n_pred": 155, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9734345351043643, + "FN": 27, + "FP": 1, + "IoU": 0.9482439926062847, + "TN": 259, + "TP": 513, + "n_pred": 514, + "n_ref": 540 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9842141386410432, + "FN": 21, + "FP": 2, + "IoU": 0.9689189189189189, + "TN": 60, + "TP": 717, + "n_pred": 719, + "n_ref": 738 + }, + "2": { + "Dice": 0.6875, + "FN": 1, + "FP": 9, + "IoU": 0.5238095238095238, + "TN": 779, + "TP": 11, + "n_pred": 20, + "n_ref": 12 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8802946593001841, + "FN": 65, + "FP": 0, + "IoU": 0.7861842105263158, + "TN": 1296, + "TP": 239, + "n_pred": 239, + "n_ref": 304 + }, + "2": { + "Dice": 0.9097472924187726, + "FN": 6, + "FP": 44, + "IoU": 0.8344370860927153, + "TN": 1298, + "TP": 252, + "n_pred": 296, + "n_ref": 258 + }, + "3": { + "Dice": 0.9613259668508287, + "FN": 1, + "FP": 6, + "IoU": 0.925531914893617, + "TN": 1506, + "TP": 87, + "n_pred": 93, + "n_ref": 88 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.6445854176332606, + "FN": 12.05263157894737, + "FP": 24.771929824561408, + "IoU": 0.5748696001850756, + "TN": 909.2105263157895, + "TP": 106.59649122807018, + "n_pred": 131.36842105263156, + "n_ref": 118.64912280701753 + }, + "mean": { + "1": { + "Dice": 0.3343959605549187, + "FN": 8.052631578947368, + "FP": 29.63157894736842, + "IoU": 0.2878262227846862, + "TN": 959.5263157894736, + "TP": 55.421052631578945, + "n_pred": 85.05263157894737, + "n_ref": 63.473684210526315 + }, + "2": { + "Dice": 0.7942187834545746, + "FN": 22.05263157894737, + "FP": 24.42105263157895, + "IoU": 0.7005995588640135, + "TN": 851.8947368421053, + "TP": 154.26315789473685, + "n_pred": 178.68421052631578, + "n_ref": 176.31578947368422 + }, + "3": { + "Dice": 0.8051415088902886, + "FN": 6.052631578947368, + "FP": 20.263157894736842, + "IoU": 0.7361830189065274, + "TN": 916.2105263157895, + "TP": 110.10526315789474, + "n_pred": 130.3684210526316, + "n_ref": 116.15789473684211 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9017632241813602, + "FN": 31, + "FP": 8, + "IoU": 0.8211009174311926, + "TN": 582, + "TP": 179, + "n_pred": 187, + "n_ref": 210 + }, + "2": { + "Dice": 0.96, + "FN": 6, + "FP": 7, + "IoU": 0.9230769230769231, + "TN": 631, + "TP": 156, + "n_pred": 163, + "n_ref": 162 + }, + "3": { + "Dice": 0.8888888888888888, + "FN": 4, + "FP": 0, + "IoU": 0.8, + "TN": 780, + "TP": 16, + "n_pred": 16, + "n_ref": 20 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 169, + "IoU": 0.0, + "TN": 631, + "TP": 0, + "n_pred": 169, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 162, + "IoU": 0.0, + "TN": 638, + "TP": 0, + "n_pred": 162, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6493506493506493, + "FN": 18, + "FP": 63, + "IoU": 0.4807692307692308, + "TN": 1444, + "TP": 75, + "n_pred": 138, + "n_ref": 93 + }, + "2": { + "Dice": 0.8679245283018868, + "FN": 23, + "FP": 47, + "IoU": 0.7666666666666667, + "TN": 1300, + "TP": 230, + "n_pred": 277, + "n_ref": 253 + }, + "3": { + "Dice": 0.9573033707865168, + "FN": 2, + "FP": 17, + "IoU": 0.9181034482758621, + "TN": 1368, + "TP": 213, + "n_pred": 230, + "n_ref": 215 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 1592, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "2": { + "Dice": 0.8329809725158562, + "FN": 50, + "FP": 108, + "IoU": 0.7137681159420289, + "TN": 1048, + "TP": 394, + "n_pred": 502, + "n_ref": 444 + }, + "3": { + "Dice": 0.8155339805825242, + "FN": 0, + "FP": 57, + "IoU": 0.6885245901639344, + "TN": 1417, + "TP": 126, + "n_pred": 183, + "n_ref": 126 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8118466898954704, + "FN": 49, + "FP": 59, + "IoU": 0.6832844574780058, + "TN": 1259, + "TP": 233, + "n_pred": 292, + "n_ref": 282 + }, + "3": { + "Dice": 0.8859934853420195, + "FN": 0, + "FP": 35, + "IoU": 0.7953216374269005, + "TN": 1429, + "TP": 136, + "n_pred": 171, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6808510638297872, + "FN": 8, + "FP": 7, + "IoU": 0.5161290322580645, + "TN": 769, + "TP": 16, + "n_pred": 23, + "n_ref": 24 + }, + "2": { + "Dice": 0.8777219430485762, + "FN": 14, + "FP": 59, + "IoU": 0.7820895522388059, + "TN": 465, + "TP": 262, + "n_pred": 321, + "n_ref": 276 + }, + "3": { + "Dice": 0.9408369408369408, + "FN": 40, + "FP": 1, + "IoU": 0.888283378746594, + "TN": 433, + "TP": 326, + "n_pred": 327, + "n_ref": 366 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 0, + "IoU": 0.0, + "TN": 1594, + "TP": 0, + "n_pred": 0, + "n_ref": 6 + }, + "2": { + "Dice": 0.905613818630475, + "FN": 148, + "FP": 5, + "IoU": 0.8275084554678692, + "TN": 713, + "TP": 734, + "n_pred": 739, + "n_ref": 882 + }, + "3": { + "Dice": 0.8979591836734694, + "FN": 0, + "FP": 35, + "IoU": 0.8148148148148148, + "TN": 1411, + "TP": 154, + "n_pred": 189, + "n_ref": 154 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 80, + "FP": 0, + "IoU": 0.0, + "TN": 720, + "TP": 0, + "n_pred": 0, + "n_ref": 80 + }, + "2": { + "Dice": 0.8884955752212389, + "FN": 4, + "FP": 59, + "IoU": 0.7993630573248408, + "TN": 486, + "TP": 251, + "n_pred": 310, + "n_ref": 255 + }, + "3": { + "Dice": 0.974937343358396, + "FN": 16, + "FP": 4, + "IoU": 0.9511002444987775, + "TN": 391, + "TP": 389, + "n_pred": 393, + "n_ref": 405 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.941398865784499, + "FN": 17, + "FP": 14, + "IoU": 0.8892857142857142, + "TN": 520, + "TP": 249, + "n_pred": 263, + "n_ref": 266 + }, + "3": { + "Dice": 0.9536784741144414, + "FN": 7, + "FP": 10, + "IoU": 0.9114583333333334, + "TN": 608, + "TP": 175, + "n_pred": 185, + "n_ref": 182 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 1572, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + }, + "2": { + "Dice": 0.8106194690265487, + "FN": 95, + "FP": 12, + "IoU": 0.6815476190476191, + "TN": 1264, + "TP": 229, + "n_pred": 241, + "n_ref": 324 + }, + "3": { + "Dice": 0.5844155844155844, + "FN": 0, + "FP": 64, + "IoU": 0.41284403669724773, + "TN": 1491, + "TP": 45, + "n_pred": 109, + "n_ref": 45 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 200, + "IoU": 0.0, + "TN": 600, + "TP": 0, + "n_pred": 200, + "n_ref": 0 + }, + "2": { + "Dice": 0.8235294117647058, + "FN": 5, + "FP": 4, + "IoU": 0.7, + "TN": 770, + "TP": 21, + "n_pred": 25, + "n_ref": 26 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 72, + "IoU": 0.0, + "TN": 728, + "TP": 0, + "n_pred": 72, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9929078014184397, + "FN": 3, + "FP": 8, + "IoU": 0.9859154929577465, + "TN": 19, + "TP": 770, + "n_pred": 778, + "n_ref": 773 + }, + "2": { + "Dice": 0.8260869565217391, + "FN": 8, + "FP": 0, + "IoU": 0.7037037037037037, + "TN": 773, + "TP": 19, + "n_pred": 19, + "n_ref": 27 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7878787878787878, + "FN": 7, + "FP": 0, + "IoU": 0.65, + "TN": 780, + "TP": 13, + "n_pred": 13, + "n_ref": 20 + }, + "2": { + "Dice": 0.7786259541984732, + "FN": 0, + "FP": 87, + "IoU": 0.6375, + "TN": 560, + "TP": 153, + "n_pred": 240, + "n_ref": 153 + }, + "3": { + "Dice": 0.9570093457943926, + "FN": 46, + "FP": 0, + "IoU": 0.9175627240143369, + "TN": 242, + "TP": 512, + "n_pred": 512, + "n_ref": 558 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2861701/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient092_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.7159258375731399, + "FN": 17.702807017543858, + "FP": 21.012456140350878, + "IoU": 0.6431130715096247, + "TN": 823.0410526315789, + "TP": 127.2963157894737, + "n_pred": 148.30877192982456, + "n_ref": 144.99912280701753 + }, + "mean": { + "1": { + "Dice": 0.5269554708284183, + "FN": 20.332105263157892, + "FP": 28.686842105263157, + "IoU": 0.4671344960533603, + "TN": 823.4210526315788, + "TP": 116.61263157894737, + "n_pred": 145.29947368421054, + "n_ref": 136.94473684210527 + }, + "2": { + "Dice": 0.779858097077027, + "FN": 21.033157894736842, + "FP": 22.6278947368421, + "IoU": 0.6850933027798554, + "TN": 821.3684210526314, + "TP": 124.02315789473684, + "n_pred": 146.65105263157892, + "n_ref": 145.05631578947367 + }, + "3": { + "Dice": 0.8409639448139744, + "FN": 11.743157894736843, + "FP": 11.722631578947368, + "IoU": 0.7771114156956583, + "TN": 824.3336842105264, + "TP": 141.25315789473683, + "n_pred": 152.9757894736842, + "n_ref": 152.9963157894737 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_002/summary.json b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_002/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..9e14977bc6dc58c6412e44829dc949d10e6b853f --- /dev/null +++ b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_002/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.7717055365420089, + "FN": 1398.2866666666669, + "FP": 3266.9, + "IoU": 0.6548590726484808, + "TN": 840967.6266666666, + "TP": 8795.826666666666, + "n_pred": 12062.726666666667, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.6525132972782133, + "FN": 1873.48, + "FP": 5459.0, + "IoU": 0.5099125749816316, + "TN": 839115.58, + "TP": 7980.58, + "n_pred": 13439.58, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.7864804494222243, + "FN": 1718.7, + "FP": 2677.28, + "IoU": 0.6580425662389442, + "TN": 841695.86, + "TP": 8336.8, + "n_pred": 11014.08, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8761228629255892, + "FN": 602.68, + "FP": 1664.42, + "IoU": 0.7966220767248666, + "TN": 842091.44, + "TP": 10070.1, + "n_pred": 11734.52, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7296143602466343, + "FN": 1447, + "FP": 5964, + "IoU": 0.5743251005169443, + "TN": 1088510, + "TP": 9999, + "n_pred": 15963, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8273896327721066, + "FN": 974, + "FP": 4234, + "IoU": 0.7055963821368004, + "TN": 1088230, + "TP": 12482, + "n_pred": 16716, + "n_ref": 13456 + }, + "3": { + "Dice": 0.935245984442873, + "FN": 1063, + "FP": 2142, + "IoU": 0.8783681214421253, + "TN": 1079570, + "TP": 23145, + "n_pred": 25287, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5156054251320878, + "FN": 145, + "FP": 8748, + "IoU": 0.3473506531630706, + "TN": 1092294, + "TP": 4733, + "n_pred": 13481, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8534094788789224, + "FN": 2232, + "FP": 2491, + "IoU": 0.7443018786205403, + "TN": 1087449, + "TP": 13748, + "n_pred": 16239, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9121131464954856, + "FN": 1005, + "FP": 2363, + "IoU": 0.8384264811705445, + "TN": 1085075, + "TP": 17477, + "n_pred": 19840, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4254305463349865, + "FN": 3423, + "FP": 11290, + "IoU": 0.27018849206349205, + "TN": 889280, + "TP": 5447, + "n_pred": 16737, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8889772891653407, + "FN": 1495, + "FP": 1575, + "IoU": 0.8001432198424582, + "TN": 894079, + "TP": 12291, + "n_pred": 13866, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9717949931380436, + "FN": 877, + "FP": 315, + "IoU": 0.9451373866617573, + "TN": 887713, + "TP": 20535, + "n_pred": 20850, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.32862784639946224, + "FN": 3067, + "FP": 12913, + "IoU": 0.19662158765270726, + "TN": 889549, + "TP": 3911, + "n_pred": 16824, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8831239759694156, + "FN": 1388, + "FP": 2036, + "IoU": 0.7907090464547677, + "TN": 893080, + "TP": 12936, + "n_pred": 14972, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9654870884000547, + "FN": 968, + "FP": 295, + "IoU": 0.9332769824079454, + "TN": 890511, + "TP": 17666, + "n_pred": 17961, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.886567672212058, + "FN": 3341, + "FP": 1991, + "IoU": 0.7962474683786159, + "TN": 1399591, + "TP": 20837, + "n_pred": 22828, + "n_ref": 24178 + }, + "2": { + "Dice": 0.7572852971960558, + "FN": 1337, + "FP": 7475, + "IoU": 0.6093798483975353, + "TN": 1403201, + "TP": 13747, + "n_pred": 21222, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9398839218122174, + "FN": 1066, + "FP": 2031, + "IoU": 0.8865858571062365, + "TN": 1398453, + "TP": 24210, + "n_pred": 26241, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7947764942240081, + "FN": 1726, + "FP": 6446, + "IoU": 0.6594432405400901, + "TN": 1401764, + "TP": 15824, + "n_pred": 22270, + "n_ref": 17550 + }, + "2": { + "Dice": 0.7535203639514731, + "FN": 1155, + "FP": 7947, + "IoU": 0.6045187920921138, + "TN": 1402745, + "TP": 13913, + "n_pred": 21860, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9184854851850264, + "FN": 1280, + "FP": 2522, + "IoU": 0.8492585837760686, + "TN": 1400538, + "TP": 21420, + "n_pred": 23942, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.662985017287745, + "FN": 2355, + "FP": 4663, + "IoU": 0.49586954960132174, + "TN": 748127, + "TP": 6903, + "n_pred": 11566, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8188961101949752, + "FN": 968, + "FP": 2766, + "IoU": 0.6933311432325887, + "TN": 749872, + "TP": 8442, + "n_pred": 11208, + "n_ref": 9410 + }, + "3": { + "Dice": 0.961866138514257, + "FN": 718, + "FP": 495, + "IoU": 0.9265338259342256, + "TN": 745537, + "TP": 15298, + "n_pred": 15793, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5022950006202704, + "FN": 869, + "FP": 7155, + "IoU": 0.33537645986912945, + "TN": 749975, + "TP": 4049, + "n_pred": 11204, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8369162995594713, + "FN": 1739, + "FP": 1963, + "IoU": 0.7195666994924627, + "TN": 748847, + "TP": 9499, + "n_pred": 11462, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9263296126066973, + "FN": 1331, + "FP": 352, + "IoU": 0.8627690802348337, + "TN": 749784, + "TP": 10581, + "n_pred": 10933, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6774660871855657, + "FN": 6128, + "FP": 1219, + "IoU": 0.512248556064529, + "TN": 1063209, + "TP": 7716, + "n_pred": 8935, + "n_ref": 13844 + }, + "2": { + "Dice": 0.833854314672729, + "FN": 1067, + "FP": 2441, + "IoU": 0.7150515798879051, + "TN": 1065961, + "TP": 8803, + "n_pred": 11244, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9280109739368999, + "FN": 1491, + "FP": 1133, + "IoU": 0.8656907406459539, + "TN": 1058735, + "TP": 16913, + "n_pred": 18046, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7023715760917126, + "FN": 5270, + "FP": 1532, + "IoU": 0.5412732667925546, + "TN": 1063444, + "TP": 8026, + "n_pred": 9558, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8309980501519068, + "FN": 1637, + "FP": 2090, + "IoU": 0.7108611326609775, + "TN": 1065382, + "TP": 9163, + "n_pred": 11253, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9250843936639834, + "FN": 976, + "FP": 1332, + "IoU": 0.8606111849257156, + "TN": 1061714, + "TP": 14250, + "n_pred": 15582, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4732202883394338, + "FN": 2797, + "FP": 11307, + "IoU": 0.3099466705807525, + "TN": 1085481, + "TP": 6335, + "n_pred": 17642, + "n_ref": 9132 + }, + "2": { + "Dice": 0.7757912270960577, + "FN": 1003, + "FP": 5054, + "IoU": 0.6337082728592163, + "TN": 1089384, + "TP": 10479, + "n_pred": 15533, + "n_ref": 11482 + }, + "3": { + "Dice": 0.888701872501578, + "FN": 936, + "FP": 1709, + "IoU": 0.799697084437713, + "TN": 1092715, + "TP": 10560, + "n_pred": 12269, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.21153937776930773, + "FN": 832, + "FP": 15717, + "IoU": 0.11828014278864084, + "TN": 1087151, + "TP": 2220, + "n_pred": 17937, + "n_ref": 3052 + }, + "2": { + "Dice": 0.7602082206598161, + "FN": 1107, + "FP": 5987, + "IoU": 0.6131741098206009, + "TN": 1087581, + "TP": 11245, + "n_pred": 17232, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7139125496876775, + "FN": 137, + "FP": 2382, + "IoU": 0.5551042034616743, + "TN": 1100258, + "TP": 3143, + "n_pred": 5525, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7097775478530781, + "FN": 2304, + "FP": 3306, + "IoU": 0.5501202886928629, + "TN": 1134410, + "TP": 6860, + "n_pred": 10166, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8094312870871186, + "FN": 4002, + "FP": 3256, + "IoU": 0.6798694424841214, + "TN": 1124208, + "TP": 15414, + "n_pred": 18670, + "n_ref": 19416 + }, + "3": { + "Dice": 0.8419819343134661, + "FN": 791, + "FP": 3390, + "IoU": 0.727088772845953, + "TN": 1131560, + "TP": 11139, + "n_pred": 14529, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1815342572711302, + "FN": 1536, + "FP": 6850, + "IoU": 0.09982825246887075, + "TN": 1137564, + "TP": 930, + "n_pred": 7780, + "n_ref": 2466 + }, + "2": { + "Dice": 0.36824980794432643, + "FN": 16287, + "FP": 11673, + "IoU": 0.22567780885651775, + "TN": 1110771, + "TP": 8149, + "n_pred": 19822, + "n_ref": 24436 + }, + "3": { + "Dice": 0.2077436831535192, + "FN": 492, + "FP": 16471, + "IoU": 0.11591181529160369, + "TN": 1127693, + "TP": 2224, + "n_pred": 18695, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8421847470425371, + "FN": 1808, + "FP": 1954, + "IoU": 0.7273913043478261, + "TN": 787000, + "TP": 10038, + "n_pred": 11992, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8499771480804388, + "FN": 1195, + "FP": 1431, + "IoU": 0.7390958768007948, + "TN": 790735, + "TP": 7439, + "n_pred": 8870, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9496174220129487, + "FN": 586, + "FP": 270, + "IoU": 0.9040681385184355, + "TN": 791877, + "TP": 8067, + "n_pred": 8337, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5308298911002629, + "FN": 405, + "FP": 5842, + "IoU": 0.3613127492076475, + "TN": 791019, + "TP": 3534, + "n_pred": 9376, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8523546881629189, + "FN": 2607, + "FP": 873, + "IoU": 0.7426987060998151, + "TN": 787275, + "TP": 10045, + "n_pred": 10918, + "n_ref": 12652 + }, + "3": { + "Dice": 0.7891452619358583, + "FN": 127, + "FP": 1326, + "IoU": 0.6517257909875359, + "TN": 796628, + "TP": 2719, + "n_pred": 4045, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7948396007282316, + "FN": 1531, + "FP": 5005, + "IoU": 0.6595301349169141, + "TN": 1328643, + "TP": 12661, + "n_pred": 17666, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8617180078708101, + "FN": 1081, + "FP": 1976, + "IoU": 0.757033857892227, + "TN": 1335258, + "TP": 9525, + "n_pred": 11501, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9713954163040325, + "FN": 586, + "FP": 400, + "IoU": 0.9443817689530686, + "TN": 1330112, + "TP": 16742, + "n_pred": 17142, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.487323433538573, + "FN": 486, + "FP": 10838, + "IoU": 0.32215970310068237, + "TN": 1331134, + "TP": 5382, + "n_pred": 16220, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8590668590668591, + "FN": 1398, + "FP": 2118, + "IoU": 0.7529510961214165, + "TN": 1333608, + "TP": 10716, + "n_pred": 12834, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9564579467483709, + "FN": 536, + "FP": 473, + "IoU": 0.9165494996278224, + "TN": 1335749, + "TP": 11082, + "n_pred": 11555, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8611949069539667, + "FN": 1471, + "FP": 2072, + "IoU": 0.7562267785881381, + "TN": 837434, + "TP": 10991, + "n_pred": 13063, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8181863108475413, + "FN": 1170, + "FP": 2509, + "IoU": 0.6923141256167935, + "TN": 840011, + "TP": 8278, + "n_pred": 10787, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9543231368647932, + "FN": 1220, + "FP": 433, + "IoU": 0.9126367528143333, + "TN": 833047, + "TP": 17268, + "n_pred": 17701, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7382049338076632, + "FN": 609, + "FP": 3880, + "IoU": 0.5850434461083379, + "TN": 841150, + "TP": 6329, + "n_pred": 10209, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8424154461890311, + "FN": 1715, + "FP": 1868, + "IoU": 0.7277355623100304, + "TN": 838808, + "TP": 9577, + "n_pred": 11445, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9067436208991495, + "FN": 1056, + "FP": 1400, + "IoU": 0.8293970547374271, + "TN": 837572, + "TP": 11940, + "n_pred": 13340, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6198029094321914, + "FN": 2554, + "FP": 1497, + "IoU": 0.4490684074527404, + "TN": 844615, + "TP": 3302, + "n_pred": 4799, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8219814241486069, + "FN": 1162, + "FP": 2978, + "IoU": 0.6977660972404731, + "TN": 838270, + "TP": 9558, + "n_pred": 12536, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9252786116708476, + "FN": 1706, + "FP": 111, + "IoU": 0.8609474248105916, + "TN": 838901, + "TP": 11250, + "n_pred": 11361, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5093833780160858, + "FN": 394, + "FP": 2900, + "IoU": 0.34172661870503596, + "TN": 846964, + "TP": 1710, + "n_pred": 4610, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8448328969659633, + "FN": 1615, + "FP": 2415, + "IoU": 0.73135124325045, + "TN": 836967, + "TP": 10971, + "n_pred": 13386, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9260383844170724, + "FN": 664, + "FP": 627, + "IoU": 0.8622639496425905, + "TN": 842595, + "TP": 8082, + "n_pred": 8709, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6276067527308838, + "FN": 4872, + "FP": 4878, + "IoU": 0.4573082489146165, + "TN": 779074, + "TP": 8216, + "n_pred": 13094, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7708042306924765, + "FN": 1129, + "FP": 3465, + "IoU": 0.6270801201396218, + "TN": 784721, + "TP": 7725, + "n_pred": 11190, + "n_ref": 8854 + }, + "3": { + "Dice": 0.8766600683822207, + "FN": 1279, + "FP": 2148, + "IoU": 0.780404972446495, + "TN": 781434, + "TP": 12179, + "n_pred": 14327, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5534041224234854, + "FN": 2352, + "FP": 6228, + "IoU": 0.38255613126079446, + "TN": 783144, + "TP": 5316, + "n_pred": 11544, + "n_ref": 7668 + }, + "2": { + "Dice": 0.7935110081112399, + "FN": 1062, + "FP": 3393, + "IoU": 0.6577026507875529, + "TN": 784025, + "TP": 8560, + "n_pred": 11953, + "n_ref": 9622 + }, + "3": { + "Dice": 0.7943091391367253, + "FN": 797, + "FP": 3468, + "IoU": 0.6588, + "TN": 784540, + "TP": 8235, + "n_pred": 11703, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7526889063406972, + "FN": 1446, + "FP": 5797, + "IoU": 0.6034492198193265, + "TN": 878405, + "TP": 11022, + "n_pred": 16819, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7304908965199355, + "FN": 2414, + "FP": 3433, + "IoU": 0.5754120978868636, + "TN": 882899, + "TP": 7924, + "n_pred": 11357, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9026542028006157, + "FN": 230, + "FP": 2363, + "IoU": 0.8225795415668833, + "TN": 882055, + "TP": 12022, + "n_pred": 14385, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5414540816326531, + "FN": 413, + "FP": 9653, + "IoU": 0.37122868386532576, + "TN": 880661, + "TP": 5943, + "n_pred": 15596, + "n_ref": 6356 + }, + "2": { + "Dice": 0.7941500635862654, + "FN": 2151, + "FP": 2705, + "IoU": 0.6585811713421922, + "TN": 882447, + "TP": 9367, + "n_pred": 12072, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9044175858975035, + "FN": 258, + "FP": 1553, + "IoU": 0.8255130552076307, + "TN": 886291, + "TP": 8568, + "n_pred": 10121, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8041002277904328, + "FN": 983, + "FP": 4005, + "IoU": 0.6723809523809524, + "TN": 746823, + "TP": 10237, + "n_pred": 14242, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9051941263127881, + "FN": 888, + "FP": 1107, + "IoU": 0.8268078826287004, + "TN": 750529, + "TP": 9524, + "n_pred": 10631, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9724340675727493, + "FN": 340, + "FP": 307, + "IoU": 0.9463471266274152, + "TN": 749989, + "TP": 11412, + "n_pred": 11719, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.43980558325024927, + "FN": 263, + "FP": 8727, + "IoU": 0.2818915248821791, + "TN": 749529, + "TP": 3529, + "n_pred": 12256, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8659766454352441, + "FN": 1843, + "FP": 1187, + "IoU": 0.7636321085888135, + "TN": 749229, + "TP": 9789, + "n_pred": 10976, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9355976109951788, + "FN": 333, + "FP": 562, + "IoU": 0.8789886425094646, + "TN": 754652, + "TP": 6501, + "n_pred": 7063, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.53203024682551, + "FN": 484, + "FP": 12636, + "IoU": 0.362425891729031, + "TN": 974750, + "TP": 7458, + "n_pred": 20094, + "n_ref": 7942 + }, + "2": { + "Dice": 0.7408238969152675, + "FN": 1159, + "FP": 4151, + "IoU": 0.5883401814094116, + "TN": 982429, + "TP": 7589, + "n_pred": 11740, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9645356701758513, + "FN": 146, + "FP": 1060, + "IoU": 0.9315006247870045, + "TN": 977722, + "TP": 16400, + "n_pred": 17460, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.25993696375415865, + "FN": 273, + "FP": 16633, + "IoU": 0.14938364779874214, + "TN": 975453, + "TP": 2969, + "n_pred": 19602, + "n_ref": 3242 + }, + "2": { + "Dice": 0.743958458158578, + "FN": 884, + "FP": 4244, + "IoU": 0.5923040228971219, + "TN": 982750, + "TP": 7450, + "n_pred": 11694, + "n_ref": 8334 + }, + "3": { + "Dice": 0.8888794386561769, + "FN": 163, + "FP": 2450, + "IoU": 0.799984690753215, + "TN": 982264, + "TP": 10451, + "n_pred": 12901, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9270529683611802, + "FN": 1285, + "FP": 767, + "IoU": 0.8640249155125571, + "TN": 742925, + "TP": 13039, + "n_pred": 13806, + "n_ref": 14324 + }, + "2": { + "Dice": 0.86428140923785, + "FN": 925, + "FP": 1552, + "IoU": 0.7609996140486299, + "TN": 747652, + "TP": 7887, + "n_pred": 9439, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9522243378916393, + "FN": 300, + "FP": 804, + "IoU": 0.9088055509664629, + "TN": 745910, + "TP": 11002, + "n_pred": 11806, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5828153564899452, + "FN": 454, + "FP": 6392, + "IoU": 0.41124871001031993, + "TN": 746388, + "TP": 4782, + "n_pred": 11174, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8366719660837308, + "FN": 1438, + "FP": 1644, + "IoU": 0.7192055393586005, + "TN": 747040, + "TP": 7894, + "n_pred": 9538, + "n_ref": 9332 + }, + "3": { + "Dice": 0.7800763205462944, + "FN": 308, + "FP": 1882, + "IoU": 0.6394468225222258, + "TN": 751942, + "TP": 3884, + "n_pred": 5766, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7276349614395887, + "FN": 2285, + "FP": 1953, + "IoU": 0.5718759470653602, + "TN": 629077, + "TP": 5661, + "n_pred": 7614, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8025415444770283, + "FN": 440, + "FP": 1984, + "IoU": 0.6702040816326531, + "TN": 631626, + "TP": 4926, + "n_pred": 6910, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9544149569357888, + "FN": 519, + "FP": 132, + "IoU": 0.9128047147066702, + "TN": 631510, + "TP": 6815, + "n_pred": 6947, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6112526539278131, + "FN": 141, + "FP": 3521, + "IoU": 0.4401467665494573, + "TN": 632435, + "TP": 2879, + "n_pred": 6400, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9017726242836199, + "FN": 586, + "FP": 888, + "IoU": 0.8211165048543689, + "TN": 630736, + "TP": 6766, + "n_pred": 7654, + "n_ref": 7352 + }, + "3": { + "Dice": 0.8505037374065648, + "FN": 139, + "FP": 781, + "IoU": 0.7398925643200452, + "TN": 635439, + "TP": 2617, + "n_pred": 3398, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7378263937896965, + "FN": 2894, + "FP": 6022, + "IoU": 0.5845680738048644, + "TN": 961578, + "TP": 12546, + "n_pred": 18568, + "n_ref": 15440 + }, + "2": { + "Dice": 0.7788675880517164, + "FN": 1161, + "FP": 3799, + "IoU": 0.637824023366192, + "TN": 969345, + "TP": 8735, + "n_pred": 12534, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9624480488432822, + "FN": 134, + "FP": 887, + "IoU": 0.9276143211627083, + "TN": 968935, + "TP": 13084, + "n_pred": 13971, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.561444607125427, + "FN": 436, + "FP": 8550, + "IoU": 0.3902836205726693, + "TN": 968302, + "TP": 5752, + "n_pred": 14302, + "n_ref": 6188 + }, + "2": { + "Dice": 0.7827397776521575, + "FN": 1648, + "FP": 2964, + "IoU": 0.6430340557275542, + "TN": 970120, + "TP": 8308, + "n_pred": 11272, + "n_ref": 9956 + }, + "3": { + "Dice": 0.6033159349094258, + "FN": 95, + "FP": 7657, + "IoU": 0.43196306880633106, + "TN": 969393, + "TP": 5895, + "n_pred": 13552, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.862710129132402, + "FN": 3119, + "FP": 1038, + "IoU": 0.7585666163317458, + "TN": 1031358, + "TP": 13061, + "n_pred": 14099, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8272750842623801, + "FN": 731, + "FP": 2600, + "IoU": 0.7054297842235585, + "TN": 1037268, + "TP": 7977, + "n_pred": 10577, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9329258736875098, + "FN": 354, + "FP": 1358, + "IoU": 0.8742840358349243, + "TN": 1034958, + "TP": 11906, + "n_pred": 13264, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6698372295532186, + "FN": 430, + "FP": 4499, + "IoU": 0.5035753852351698, + "TN": 1038647, + "TP": 5000, + "n_pred": 9499, + "n_ref": 5430 + }, + "2": { + "Dice": 0.7834530099805808, + "FN": 1648, + "FP": 3147, + "IoU": 0.643997327195783, + "TN": 1035107, + "TP": 8674, + "n_pred": 11821, + "n_ref": 10322 + }, + "3": { + "Dice": 0.6910446691044669, + "FN": 261, + "FP": 4048, + "IoU": 0.5279360210341806, + "TN": 1039448, + "TP": 4819, + "n_pred": 8867, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6410789227070856, + "FN": 3295, + "FP": 5514, + "IoU": 0.4717558167426241, + "TN": 472540, + "TP": 7867, + "n_pred": 13381, + "n_ref": 11162 + }, + "2": { + "Dice": 0.6761796659640019, + "FN": 632, + "FP": 1365, + "IoU": 0.5107790298873102, + "TN": 485134, + "TP": 2085, + "n_pred": 3450, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9401853411962932, + "FN": 187, + "FP": 381, + "IoU": 0.8871224165341812, + "TN": 484184, + "TP": 4464, + "n_pred": 4845, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5829784997108763, + "FN": 1106, + "FP": 6827, + "IoU": 0.4114111886036504, + "TN": 475738, + "TP": 5545, + "n_pred": 12372, + "n_ref": 6651 + }, + "2": { + "Dice": 0.786096256684492, + "FN": 714, + "FP": 726, + "IoU": 0.6475770925110133, + "TN": 485130, + "TP": 2646, + "n_pred": 3372, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8318498917488574, + "FN": 61, + "FP": 638, + "IoU": 0.7121087314662273, + "TN": 486788, + "TP": 1729, + "n_pred": 2367, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8857021803604602, + "FN": 2288, + "FP": 1219, + "IoU": 0.7948522959929804, + "TN": 463385, + "TP": 13588, + "n_pred": 14807, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7536146932395467, + "FN": 662, + "FP": 1860, + "IoU": 0.6046402257407117, + "TN": 474101, + "TP": 3857, + "n_pred": 5717, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9488378786788515, + "FN": 367, + "FP": 344, + "IoU": 0.9026560788608982, + "TN": 473176, + "TP": 6593, + "n_pred": 6937, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8697132158965194, + "FN": 1391, + "FP": 1671, + "IoU": 0.769462430356874, + "TN": 467198, + "TP": 10220, + "n_pred": 11891, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8019616584930896, + "FN": 1165, + "FP": 1056, + "IoU": 0.6693956534682941, + "TN": 473762, + "TP": 4497, + "n_pred": 5553, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8161597821152973, + "FN": 109, + "FP": 1106, + "IoU": 0.6894171779141104, + "TN": 476568, + "TP": 2697, + "n_pred": 3803, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7653136531365313, + "FN": 7191, + "FP": 1077, + "IoU": 0.6198445905558876, + "TN": 622891, + "TP": 13481, + "n_pred": 14558, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7909439671475658, + "FN": 1747, + "FP": 2122, + "IoU": 0.6541830532713622, + "TN": 633452, + "TP": 7319, + "n_pred": 9441, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9287621081534589, + "FN": 1821, + "FP": 47, + "IoU": 0.866998932004272, + "TN": 630595, + "TP": 12177, + "n_pred": 12224, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8023879316508186, + "FN": 4109, + "FP": 1419, + "IoU": 0.669989851352158, + "TN": 627889, + "TP": 11223, + "n_pred": 12642, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8549856808122884, + "FN": 2314, + "FP": 1028, + "IoU": 0.7467030468394725, + "TN": 631446, + "TP": 9852, + "n_pred": 10880, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9145253628012249, + "FN": 693, + "FP": 591, + "IoU": 0.8425119587881761, + "TN": 636487, + "TP": 6869, + "n_pred": 7460, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8580890185725534, + "FN": 3525, + "FP": 2603, + "IoU": 0.7514500101399311, + "TN": 539825, + "TP": 18527, + "n_pred": 21130, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7141984110816867, + "FN": 963, + "FP": 1843, + "IoU": 0.5554499366286438, + "TN": 558168, + "TP": 3506, + "n_pred": 5349, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9501139528994682, + "FN": 393, + "FP": 395, + "IoU": 0.904968644476604, + "TN": 556188, + "TP": 7504, + "n_pred": 7899, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6719707283866576, + "FN": 535, + "FP": 7175, + "IoU": 0.5059909015185494, + "TN": 548873, + "TP": 7897, + "n_pred": 15072, + "n_ref": 8432 + }, + "2": { + "Dice": 0.7922907928899541, + "FN": 896, + "FP": 1184, + "IoU": 0.6560277823714239, + "TN": 558433, + "TP": 3967, + "n_pred": 5151, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8398335933437338, + "FN": 222, + "FP": 1010, + "IoU": 0.7238906320035858, + "TN": 560018, + "TP": 3230, + "n_pred": 4240, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7379786418077763, + "FN": 1321, + "FP": 3120, + "IoU": 0.5847592332865825, + "TN": 408185, + "TP": 6254, + "n_pred": 9374, + "n_ref": 7575 + }, + "2": { + "Dice": 0.4434141201264489, + "FN": 1804, + "FP": 837, + "IoU": 0.28486325480639046, + "TN": 415187, + "TP": 1052, + "n_pred": 1889, + "n_ref": 2856 + }, + "3": { + "Dice": 0.8216839184718814, + "FN": 349, + "FP": 1322, + "IoU": 0.69733743886977, + "TN": 413359, + "TP": 3850, + "n_pred": 5172, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.632404181184669, + "FN": 744, + "FP": 3898, + "IoU": 0.4624203821656051, + "TN": 410245, + "TP": 3993, + "n_pred": 7891, + "n_ref": 4737 + }, + "2": { + "Dice": 0.48113590263691686, + "FN": 1807, + "FP": 751, + "IoU": 0.31677350427350426, + "TN": 415136, + "TP": 1186, + "n_pred": 1937, + "n_ref": 2993 + }, + "3": { + "Dice": 0.7286395306197286, + "FN": 396, + "FP": 1084, + "IoU": 0.5731179694260168, + "TN": 415413, + "TP": 1987, + "n_pred": 3071, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9219582789170873, + "FN": 506, + "FP": 1705, + "IoU": 0.8552157684500032, + "TN": 481239, + "TP": 13060, + "n_pred": 14765, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8012649332396345, + "FN": 1971, + "FP": 857, + "IoU": 0.6684253722593505, + "TN": 487981, + "TP": 5701, + "n_pred": 6558, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9248037291462218, + "FN": 233, + "FP": 993, + "IoU": 0.860125499144324, + "TN": 487745, + "TP": 7539, + "n_pred": 8532, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8789131294252956, + "FN": 1035, + "FP": 2334, + "IoU": 0.7839830725827135, + "TN": 480914, + "TP": 12227, + "n_pred": 14561, + "n_ref": 13262 + }, + "2": { + "Dice": 0.7568399224028363, + "FN": 2819, + "FP": 816, + "IoU": 0.6088032716315109, + "TN": 487218, + "TP": 5657, + "n_pred": 6473, + "n_ref": 8476 + }, + "3": { + "Dice": 0.7786648154575957, + "FN": 35, + "FP": 1878, + "IoU": 0.6375521030693444, + "TN": 491232, + "TP": 3365, + "n_pred": 5243, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_002/summary_cross_val.json b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_002/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..d45a5fa1bae9e7024e73a8dd57a3a76cd759a395 --- /dev/null +++ b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_002/summary_cross_val.json @@ -0,0 +1,4740 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.580616399866643, + "FN": 22.69333333333333, + "FP": 33.54666666666666, + "IoU": 0.5146530198489222, + "TN": 907.4933333333333, + "TP": 124.26666666666667, + "n_pred": 157.8133333333333, + "n_ref": 146.96 + }, + "mean": { + "1": { + "Dice": 0.462351111460895, + "FN": 22.32, + "FP": 30.72, + "IoU": 0.4076487976155661, + "TN": 905.08, + "TP": 129.88, + "n_pred": 160.6, + "n_ref": 152.2 + }, + "2": { + "Dice": 0.684085986108813, + "FN": 26.48, + "FP": 31.88, + "IoU": 0.591419873288584, + "TN": 913.96, + "TP": 115.68, + "n_pred": 147.56, + "n_ref": 142.16 + }, + "3": { + "Dice": 0.5954121020302212, + "FN": 19.28, + "FP": 38.04, + "IoU": 0.5448903886426164, + "TN": 903.44, + "TP": 127.24, + "n_pred": 165.28, + "n_ref": 146.52 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 1590, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 222, + "IoU": 0.0, + "TN": 1378, + "TP": 0, + "n_pred": 222, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8622047244094488, + "FN": 61, + "FP": 9, + "IoU": 0.7577854671280276, + "TN": 511, + "TP": 219, + "n_pred": 228, + "n_ref": 280 + }, + "3": { + "Dice": 0.961439588688946, + "FN": 9, + "FP": 6, + "IoU": 0.9257425742574258, + "TN": 598, + "TP": 187, + "n_pred": 193, + "n_ref": 196 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5949214026602176, + "FN": 229, + "FP": 106, + "IoU": 0.423407917383821, + "TN": 1019, + "TP": 246, + "n_pred": 352, + "n_ref": 475 + }, + "3": { + "Dice": 0.6484641638225256, + "FN": 206, + "FP": 0, + "IoU": 0.4797979797979798, + "TN": 1204, + "TP": 190, + "n_pred": 190, + "n_ref": 396 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9834162520729685, + "FN": 3, + "FP": 17, + "IoU": 0.967373572593801, + "TN": 187, + "TP": 593, + "n_pred": 610, + "n_ref": 596 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7623529411764706, + "FN": 4, + "FP": 97, + "IoU": 0.6159695817490495, + "TN": 537, + "TP": 162, + "n_pred": 259, + "n_ref": 166 + }, + "3": { + "Dice": 0.7539267015706806, + "FN": 94, + "FP": 0, + "IoU": 0.6050420168067226, + "TN": 562, + "TP": 144, + "n_pred": 144, + "n_ref": 238 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9032258064516129, + "FN": 36, + "FP": 6, + "IoU": 0.8235294117647058, + "TN": 562, + "TP": 196, + "n_pred": 202, + "n_ref": 232 + }, + "3": { + "Dice": 0.9867724867724867, + "FN": 2, + "FP": 8, + "IoU": 0.9738903394255874, + "TN": 417, + "TP": 373, + "n_pred": 381, + "n_ref": 375 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.864501679731243, + "FN": 58, + "FP": 63, + "IoU": 0.7613412228796844, + "TN": 1093, + "TP": 386, + "n_pred": 449, + "n_ref": 444 + }, + "3": { + "Dice": 0.9097472924187726, + "FN": 0, + "FP": 25, + "IoU": 0.8344370860927153, + "TN": 1449, + "TP": 126, + "n_pred": 151, + "n_ref": 126 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 795, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + }, + "2": { + "Dice": 0.6344827586206897, + "FN": 39, + "FP": 14, + "IoU": 0.46464646464646464, + "TN": 701, + "TP": 46, + "n_pred": 60, + "n_ref": 85 + }, + "3": { + "Dice": 0.6920415224913494, + "FN": 1, + "FP": 266, + "IoU": 0.5291005291005291, + "TN": 233, + "TP": 300, + "n_pred": 566, + "n_ref": 301 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9145299145299145, + "FN": 38, + "FP": 22, + "IoU": 0.84251968503937, + "TN": 1219, + "TP": 321, + "n_pred": 343, + "n_ref": 359 + }, + "3": { + "Dice": 0.9585406301824212, + "FN": 18, + "FP": 7, + "IoU": 0.9203821656050956, + "TN": 1286, + "TP": 289, + "n_pred": 296, + "n_ref": 307 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7942583732057417, + "FN": 0, + "FP": 86, + "IoU": 0.6587301587301587, + "TN": 1348, + "TP": 166, + "n_pred": 252, + "n_ref": 166 + }, + "2": { + "Dice": 0.8956228956228957, + "FN": 18, + "FP": 13, + "IoU": 0.8109756097560976, + "TN": 1436, + "TP": 133, + "n_pred": 146, + "n_ref": 151 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 1597, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.972809667673716, + "FN": 25, + "FP": 2, + "IoU": 0.9470588235294117, + "TN": 290, + "TP": 483, + "n_pred": 485, + "n_ref": 508 + }, + "2": { + "Dice": 0.9544626593806922, + "FN": 2, + "FP": 23, + "IoU": 0.9128919860627178, + "TN": 513, + "TP": 262, + "n_pred": 285, + "n_ref": 264 + }, + "3": { + "Dice": 0.9615384615384616, + "FN": 0, + "FP": 2, + "IoU": 0.9259259259259259, + "TN": 773, + "TP": 25, + "n_pred": 27, + "n_ref": 25 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7095115681233933, + "FN": 22, + "FP": 204, + "IoU": 0.549800796812749, + "TN": 1098, + "TP": 276, + "n_pred": 480, + "n_ref": 298 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 13, + "IoU": 0.0, + "TN": 787, + "TP": 0, + "n_pred": 13, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 149, + "IoU": 0.0, + "TN": 651, + "TP": 0, + "n_pred": 149, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 789, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8471001757469244, + "FN": 87, + "FP": 0, + "IoU": 0.7347560975609756, + "TN": 472, + "TP": 241, + "n_pred": 241, + "n_ref": 328 + }, + "2": { + "Dice": 0.8937093275488069, + "FN": 6, + "FP": 43, + "IoU": 0.807843137254902, + "TN": 545, + "TP": 206, + "n_pred": 249, + "n_ref": 212 + }, + "3": { + "Dice": 0.9752066115702479, + "FN": 6, + "FP": 0, + "IoU": 0.9516129032258065, + "TN": 676, + "TP": 118, + "n_pred": 118, + "n_ref": 124 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 77, + "IoU": 0.0, + "TN": 723, + "TP": 0, + "n_pred": 77, + "n_ref": 0 + }, + "2": { + "Dice": 0.7572383073496659, + "FN": 13, + "FP": 96, + "IoU": 0.6093189964157706, + "TN": 521, + "TP": 170, + "n_pred": 266, + "n_ref": 183 + }, + "3": { + "Dice": 0.5593495934959349, + "FN": 5, + "FP": 266, + "IoU": 0.38826185101580135, + "TN": 357, + "TP": 172, + "n_pred": 438, + "n_ref": 177 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 51, + "IoU": 0.0, + "TN": 749, + "TP": 0, + "n_pred": 51, + "n_ref": 0 + }, + "2": { + "Dice": 0.7906976744186046, + "FN": 9, + "FP": 0, + "IoU": 0.6538461538461539, + "TN": 774, + "TP": 17, + "n_pred": 17, + "n_ref": 26 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 4, + "FP": 0, + "IoU": 0.0, + "TN": 796, + "TP": 0, + "n_pred": 0, + "n_ref": 4 + }, + "2": { + "Dice": 0.6793349168646081, + "FN": 19, + "FP": 116, + "IoU": 0.5143884892086331, + "TN": 522, + "TP": 143, + "n_pred": 259, + "n_ref": 162 + }, + "3": { + "Dice": 0.9781859931113662, + "FN": 0, + "FP": 19, + "IoU": 0.9573033707865168, + "TN": 355, + "TP": 426, + "n_pred": 445, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9138576779026217, + "FN": 16, + "FP": 30, + "IoU": 0.8413793103448276, + "TN": 510, + "TP": 244, + "n_pred": 274, + "n_ref": 260 + }, + "3": { + "Dice": 0.946078431372549, + "FN": 7, + "FP": 15, + "IoU": 0.8976744186046511, + "TN": 585, + "TP": 193, + "n_pred": 208, + "n_ref": 200 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9036544850498339, + "FN": 0, + "FP": 58, + "IoU": 0.8242424242424242, + "TN": 470, + "TP": 272, + "n_pred": 330, + "n_ref": 272 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 55, + "IoU": 0.0, + "TN": 745, + "TP": 0, + "n_pred": 55, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6872852233676976, + "FN": 35, + "FP": 238, + "IoU": 0.5235602094240838, + "TN": 1027, + "TP": 300, + "n_pred": 538, + "n_ref": 335 + }, + "2": { + "Dice": 0.0, + "FN": 89, + "FP": 0, + "IoU": 0.0, + "TN": 1511, + "TP": 0, + "n_pred": 0, + "n_ref": 89 + }, + "3": { + "Dice": 0.0, + "FN": 131, + "FP": 0, + "IoU": 0.0, + "TN": 1469, + "TP": 0, + "n_pred": 0, + "n_ref": 131 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5145888594164456, + "FN": 366, + "FP": 0, + "IoU": 0.3464285714285714, + "TN": 240, + "TP": 194, + "n_pred": 194, + "n_ref": 560 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 25, + "IoU": 0.0, + "TN": 775, + "TP": 0, + "n_pred": 25, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.984993178717599, + "FN": 16, + "FP": 6, + "IoU": 0.9704301075268817, + "TN": 856, + "TP": 722, + "n_pred": 728, + "n_ref": 738 + }, + "2": { + "Dice": 0.8924050632911392, + "FN": 25, + "FP": 9, + "IoU": 0.8057142857142857, + "TN": 1425, + "TP": 141, + "n_pred": 150, + "n_ref": 166 + }, + "3": { + "Dice": 0.9815384615384616, + "FN": 3, + "FP": 21, + "IoU": 0.9637462235649547, + "TN": 938, + "TP": 638, + "n_pred": 659, + "n_ref": 641 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient096_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.7601325332923267, + "FN": 24.293333333333333, + "FP": 26.8, + "IoU": 0.6723951950815171, + "TN": 982.0266666666666, + "TP": 182.88, + "n_pred": 209.67999999999998, + "n_ref": 207.17333333333332 + }, + "mean": { + "1": { + "Dice": 0.6495455604210568, + "FN": 29.72, + "FP": 27.52, + "IoU": 0.5772418191143706, + "TN": 1013.84, + "TP": 144.92, + "n_pred": 172.44, + "n_ref": 174.64 + }, + "2": { + "Dice": 0.8314679133354889, + "FN": 33.4, + "FP": 30.96, + "IoU": 0.7219661307267478, + "TN": 954.48, + "TP": 197.16, + "n_pred": 228.12, + "n_ref": 230.56 + }, + "3": { + "Dice": 0.799384126120434, + "FN": 9.76, + "FP": 21.92, + "IoU": 0.7179776354034333, + "TN": 977.76, + "TP": 206.56, + "n_pred": 228.48, + "n_ref": 216.32 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.845360824742268, + "FN": 2, + "FP": 13, + "IoU": 0.7321428571428571, + "TN": 744, + "TP": 41, + "n_pred": 54, + "n_ref": 43 + }, + "2": { + "Dice": 0.8704318936877077, + "FN": 64, + "FP": 14, + "IoU": 0.7705882352941177, + "TN": 460, + "TP": 262, + "n_pred": 276, + "n_ref": 326 + }, + "3": { + "Dice": 0.8875739644970414, + "FN": 14, + "FP": 5, + "IoU": 0.7978723404255319, + "TN": 706, + "TP": 75, + "n_pred": 80, + "n_ref": 89 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9194029850746268, + "FN": 8, + "FP": 19, + "IoU": 0.850828729281768, + "TN": 2219, + "TP": 154, + "n_pred": 173, + "n_ref": 162 + }, + "2": { + "Dice": 0.9044289044289044, + "FN": 30, + "FP": 93, + "IoU": 0.825531914893617, + "TN": 1695, + "TP": 582, + "n_pred": 675, + "n_ref": 612 + }, + "3": { + "Dice": 0.9841969864020581, + "FN": 33, + "FP": 10, + "IoU": 0.9688856729377714, + "TN": 1018, + "TP": 1339, + "n_pred": 1349, + "n_ref": 1372 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 152, + "FP": 0, + "IoU": 0.0, + "TN": 648, + "TP": 0, + "n_pred": 0, + "n_ref": 152 + }, + "2": { + "Dice": 0.6666666666666666, + "FN": 47, + "FP": 14, + "IoU": 0.5, + "TN": 678, + "TP": 61, + "n_pred": 75, + "n_ref": 108 + }, + "3": { + "Dice": 0.0, + "FN": 15, + "FP": 0, + "IoU": 0.0, + "TN": 785, + "TP": 0, + "n_pred": 0, + "n_ref": 15 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6845637583892618, + "FN": 16, + "FP": 78, + "IoU": 0.5204081632653061, + "TN": 604, + "TP": 102, + "n_pred": 180, + "n_ref": 118 + }, + "3": { + "Dice": 0.8461538461538461, + "FN": 0, + "FP": 16, + "IoU": 0.7333333333333333, + "TN": 740, + "TP": 44, + "n_pred": 60, + "n_ref": 44 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9230769230769231, + "FN": 0, + "FP": 2, + "IoU": 0.8571428571428571, + "TN": 1586, + "TP": 12, + "n_pred": 14, + "n_ref": 12 + }, + "3": { + "Dice": 0.9987293519695044, + "FN": 2, + "FP": 0, + "IoU": 0.9974619289340102, + "TN": 812, + "TP": 786, + "n_pred": 786, + "n_ref": 788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9634002361275088, + "FN": 26, + "FP": 5, + "IoU": 0.929384965831435, + "TN": 1961, + "TP": 408, + "n_pred": 413, + "n_ref": 434 + }, + "2": { + "Dice": 0.7065637065637066, + "FN": 35, + "FP": 117, + "IoU": 0.5462686567164179, + "TN": 2065, + "TP": 183, + "n_pred": 300, + "n_ref": 218 + }, + "3": { + "Dice": 0.947242206235012, + "FN": 9, + "FP": 35, + "IoU": 0.8997722095671982, + "TN": 1961, + "TP": 395, + "n_pred": 430, + "n_ref": 404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7863247863247863, + "FN": 9, + "FP": 166, + "IoU": 0.647887323943662, + "TN": 1103, + "TP": 322, + "n_pred": 488, + "n_ref": 331 + }, + "2": { + "Dice": 0.7137254901960784, + "FN": 18, + "FP": 201, + "IoU": 0.5548780487804879, + "TN": 1108, + "TP": 273, + "n_pred": 474, + "n_ref": 291 + }, + "3": { + "Dice": 0.6242544731610338, + "FN": 13, + "FP": 176, + "IoU": 0.45375722543352603, + "TN": 1254, + "TP": 157, + "n_pred": 333, + "n_ref": 170 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9434931506849316, + "FN": 34, + "FP": 32, + "IoU": 0.893030794165316, + "TN": 983, + "TP": 551, + "n_pred": 583, + "n_ref": 585 + }, + "2": { + "Dice": 0.9597855227882037, + "FN": 49, + "FP": 11, + "IoU": 0.9226804123711341, + "TN": 824, + "TP": 716, + "n_pred": 727, + "n_ref": 765 + }, + "3": { + "Dice": 0.7058823529411765, + "FN": 1, + "FP": 9, + "IoU": 0.5454545454545454, + "TN": 1578, + "TP": 12, + "n_pred": 21, + "n_ref": 13 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 0, + "IoU": 0.0, + "TN": 1594, + "TP": 0, + "n_pred": 0, + "n_ref": 6 + }, + "2": { + "Dice": 0.9024691358024691, + "FN": 151, + "FP": 7, + "IoU": 0.8222722159730034, + "TN": 711, + "TP": 731, + "n_pred": 738, + "n_ref": 882 + }, + "3": { + "Dice": 0.8555555555555555, + "FN": 0, + "FP": 52, + "IoU": 0.7475728155339806, + "TN": 1394, + "TP": 154, + "n_pred": 206, + "n_ref": 154 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8252299605781866, + "FN": 12, + "FP": 121, + "IoU": 0.7024608501118568, + "TN": 1153, + "TP": 314, + "n_pred": 435, + "n_ref": 326 + }, + "2": { + "Dice": 0.773109243697479, + "FN": 10, + "FP": 44, + "IoU": 0.6301369863013698, + "TN": 1454, + "TP": 92, + "n_pred": 136, + "n_ref": 102 + }, + "3": { + "Dice": 0.8987341772151899, + "FN": 32, + "FP": 0, + "IoU": 0.8160919540229885, + "TN": 1426, + "TP": 142, + "n_pred": 142, + "n_ref": 174 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.95, + "FN": 2, + "FP": 14, + "IoU": 0.9047619047619048, + "TN": 632, + "TP": 152, + "n_pred": 166, + "n_ref": 154 + }, + "2": { + "Dice": 0.9180327868852459, + "FN": 40, + "FP": 0, + "IoU": 0.8484848484848485, + "TN": 536, + "TP": 224, + "n_pred": 224, + "n_ref": 264 + }, + "3": { + "Dice": 0.46153846153846156, + "FN": 0, + "FP": 28, + "IoU": 0.3, + "TN": 760, + "TP": 12, + "n_pred": 40, + "n_ref": 12 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7048346055979644, + "FN": 0, + "FP": 232, + "IoU": 0.5442043222003929, + "TN": 291, + "TP": 277, + "n_pred": 509, + "n_ref": 277 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7755102040816326, + "FN": 11, + "FP": 22, + "IoU": 0.6333333333333333, + "TN": 710, + "TP": 57, + "n_pred": 79, + "n_ref": 68 + }, + "3": { + "Dice": 0.9832167832167832, + "FN": 23, + "FP": 1, + "IoU": 0.9669876203576341, + "TN": 73, + "TP": 703, + "n_pred": 704, + "n_ref": 726 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.18633540372670807, + "FN": 131, + "FP": 0, + "IoU": 0.10273972602739725, + "TN": 654, + "TP": 15, + "n_pred": 15, + "n_ref": 146 + }, + "2": { + "Dice": 0.8382838283828383, + "FN": 27, + "FP": 22, + "IoU": 0.7215909090909091, + "TN": 624, + "TP": 127, + "n_pred": 149, + "n_ref": 154 + }, + "3": { + "Dice": 0.6428571428571429, + "FN": 20, + "FP": 0, + "IoU": 0.47368421052631576, + "TN": 762, + "TP": 18, + "n_pred": 18, + "n_ref": 38 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7613636363636364, + "FN": 168, + "FP": 0, + "IoU": 0.6146788990825688, + "TN": 364, + "TP": 268, + "n_pred": 268, + "n_ref": 436 + }, + "3": { + "Dice": 0.628428927680798, + "FN": 0, + "FP": 149, + "IoU": 0.4581818181818182, + "TN": 525, + "TP": 126, + "n_pred": 275, + "n_ref": 126 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8925318761384335, + "FN": 43, + "FP": 16, + "IoU": 0.805921052631579, + "TN": 496, + "TP": 245, + "n_pred": 261, + "n_ref": 288 + }, + "3": { + "Dice": 0.9215686274509803, + "FN": 9, + "FP": 31, + "IoU": 0.8545454545454545, + "TN": 525, + "TP": 235, + "n_pred": 266, + "n_ref": 244 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8743718592964824, + "FN": 123, + "FP": 2, + "IoU": 0.7767857142857143, + "TN": 240, + "TP": 435, + "n_pred": 437, + "n_ref": 558 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9748502994011976, + "FN": 15, + "FP": 6, + "IoU": 0.9509345794392523, + "TN": 372, + "TP": 407, + "n_pred": 413, + "n_ref": 422 + }, + "2": { + "Dice": 0.9141104294478528, + "FN": 13, + "FP": 15, + "IoU": 0.8418079096045198, + "TN": 623, + "TP": 149, + "n_pred": 164, + "n_ref": 162 + }, + "3": { + "Dice": 0.9665809768637532, + "FN": 10, + "FP": 3, + "IoU": 0.9353233830845771, + "TN": 599, + "TP": 188, + "n_pred": 191, + "n_ref": 198 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 6, + "FP": 0, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 0, + "n_ref": 6 + }, + "2": { + "Dice": 0.769857433808554, + "FN": 61, + "FP": 52, + "IoU": 0.6258278145695364, + "TN": 498, + "TP": 189, + "n_pred": 241, + "n_ref": 250 + }, + "3": { + "Dice": 0.9074733096085409, + "FN": 52, + "FP": 0, + "IoU": 0.8306188925081434, + "TN": 493, + "TP": 255, + "n_pred": 255, + "n_ref": 307 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9387755102040817, + "FN": 23, + "FP": 34, + "IoU": 0.8846153846153846, + "TN": 1906, + "TP": 437, + "n_pred": 471, + "n_ref": 460 + }, + "2": { + "Dice": 0.9005847953216374, + "FN": 2, + "FP": 32, + "IoU": 0.8191489361702128, + "TN": 2212, + "TP": 154, + "n_pred": 186, + "n_ref": 156 + }, + "3": { + "Dice": 0.9753086419753086, + "FN": 6, + "FP": 2, + "IoU": 0.9518072289156626, + "TN": 2234, + "TP": 158, + "n_pred": 160, + "n_ref": 164 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.48034934497816595, + "FN": 194, + "FP": 44, + "IoU": 0.3160919540229885, + "TN": 2052, + "TP": 110, + "n_pred": 154, + "n_ref": 304 + }, + "2": { + "Dice": 0.9227941176470589, + "FN": 50, + "FP": 34, + "IoU": 0.856655290102389, + "TN": 1814, + "TP": 502, + "n_pred": 536, + "n_ref": 552 + }, + "3": { + "Dice": 0.9530026109660574, + "FN": 5, + "FP": 31, + "IoU": 0.9102244389027432, + "TN": 1999, + "TP": 365, + "n_pred": 396, + "n_ref": 370 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.73152412508592, + "FN": 23.416666666666668, + "FP": 15.583333333333334, + "IoU": 0.6677555936743101, + "TN": 951.138888888889, + "TP": 143.19444444444446, + "n_pred": 158.7777777777778, + "n_ref": 166.61111111111111 + }, + "mean": { + "1": { + "Dice": 0.450859267886522, + "FN": 31.875, + "FP": 13.583333333333334, + "IoU": 0.40502452969282543, + "TN": 1002.7083333333334, + "TP": 85.16666666666667, + "n_pred": 98.75, + "n_ref": 117.04166666666667 + }, + "2": { + "Dice": 0.8065307270161025, + "FN": 24.666666666666668, + "FP": 21.5, + "IoU": 0.7143456613604435, + "TN": 932.4583333333334, + "TP": 154.70833333333334, + "n_pred": 176.20833333333334, + "n_ref": 179.375 + }, + "3": { + "Dice": 0.9371823803551356, + "FN": 13.708333333333334, + "FP": 11.666666666666666, + "IoU": 0.8838965899696614, + "TN": 918.25, + "TP": 189.70833333333334, + "n_pred": 201.375, + "n_ref": 203.41666666666666 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9108433734939759, + "FN": 21, + "FP": 16, + "IoU": 0.8362831858407079, + "TN": 1374, + "TP": 189, + "n_pred": 205, + "n_ref": 210 + }, + "2": { + "Dice": 0.8622448979591837, + "FN": 51, + "FP": 57, + "IoU": 0.757847533632287, + "TN": 1154, + "TP": 338, + "n_pred": 395, + "n_ref": 389 + }, + "3": { + "Dice": 0.9418742586002372, + "FN": 31, + "FP": 18, + "IoU": 0.8901345291479821, + "TN": 1154, + "TP": 397, + "n_pred": 415, + "n_ref": 428 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8148148148148148, + "FN": 14, + "FP": 91, + "IoU": 0.6875, + "TN": 1264, + "TP": 231, + "n_pred": 322, + "n_ref": 245 + }, + "3": { + "Dice": 0.9649122807017544, + "FN": 5, + "FP": 3, + "IoU": 0.9322033898305084, + "TN": 1482, + "TP": 110, + "n_pred": 113, + "n_ref": 115 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8687782805429864, + "FN": 36, + "FP": 22, + "IoU": 0.768, + "TN": 550, + "TP": 192, + "n_pred": 214, + "n_ref": 228 + }, + "3": { + "Dice": 0.9622641509433962, + "FN": 9, + "FP": 23, + "IoU": 0.9272727272727272, + "TN": 360, + "TP": 408, + "n_pred": 431, + "n_ref": 417 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8792270531400966, + "FN": 2, + "FP": 23, + "IoU": 0.7844827586206896, + "TN": 1484, + "TP": 91, + "n_pred": 114, + "n_ref": 93 + }, + "2": { + "Dice": 0.8752475247524752, + "FN": 32, + "FP": 31, + "IoU": 0.778169014084507, + "TN": 1316, + "TP": 221, + "n_pred": 252, + "n_ref": 253 + }, + "3": { + "Dice": 0.9429824561403509, + "FN": 0, + "FP": 26, + "IoU": 0.8921161825726142, + "TN": 1359, + "TP": 215, + "n_pred": 241, + "n_ref": 215 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8190854870775348, + "FN": 10, + "FP": 81, + "IoU": 0.6936026936026936, + "TN": 2103, + "TP": 206, + "n_pred": 287, + "n_ref": 216 + }, + "2": { + "Dice": 0.9082483781278962, + "FN": 66, + "FP": 33, + "IoU": 0.831918505942275, + "TN": 1811, + "TP": 490, + "n_pred": 523, + "n_ref": 556 + }, + "3": { + "Dice": 0.9671150971599403, + "FN": 33, + "FP": 11, + "IoU": 0.9363241678726484, + "TN": 1709, + "TP": 647, + "n_pred": 658, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8827160493827161, + "FN": 74, + "FP": 2, + "IoU": 0.7900552486187845, + "TN": 438, + "TP": 286, + "n_pred": 288, + "n_ref": 360 + }, + "3": { + "Dice": 0.9201680672268907, + "FN": 2, + "FP": 74, + "IoU": 0.8521400778210116, + "TN": 286, + "TP": 438, + "n_pred": 512, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 29, + "IoU": 0.0, + "TN": 1571, + "TP": 0, + "n_pred": 29, + "n_ref": 0 + }, + "2": { + "Dice": 0.7985347985347986, + "FN": 142, + "FP": 23, + "IoU": 0.6646341463414634, + "TN": 1108, + "TP": 327, + "n_pred": 350, + "n_ref": 469 + }, + "3": { + "Dice": 0.8354866494401378, + "FN": 179, + "FP": 12, + "IoU": 0.7174556213017751, + "TN": 924, + "TP": 485, + "n_pred": 497, + "n_ref": 664 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9214380825565912, + "FN": 18, + "FP": 41, + "IoU": 0.854320987654321, + "TN": 395, + "TP": 346, + "n_pred": 387, + "n_ref": 364 + }, + "3": { + "Dice": 0.9406657018813314, + "FN": 37, + "FP": 4, + "IoU": 0.8879781420765027, + "TN": 434, + "TP": 325, + "n_pred": 329, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 16, + "IoU": 0.0, + "TN": 784, + "TP": 0, + "n_pred": 16, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.014598540145985401, + "FN": 79, + "FP": 56, + "IoU": 0.007352941176470588, + "TN": 1464, + "TP": 1, + "n_pred": 57, + "n_ref": 80 + }, + "2": { + "Dice": 0.8710033076074972, + "FN": 36, + "FP": 81, + "IoU": 0.771484375, + "TN": 1088, + "TP": 395, + "n_pred": 476, + "n_ref": 431 + }, + "3": { + "Dice": 0.9774774774774775, + "FN": 8, + "FP": 32, + "IoU": 0.9559471365638766, + "TN": 692, + "TP": 868, + "n_pred": 900, + "n_ref": 876 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.39285714285714285, + "FN": 3, + "FP": 31, + "IoU": 0.24444444444444444, + "TN": 755, + "TP": 11, + "n_pred": 42, + "n_ref": 14 + }, + "2": { + "Dice": 0.8362068965517241, + "FN": 60, + "FP": 16, + "IoU": 0.7185185185185186, + "TN": 530, + "TP": 194, + "n_pred": 210, + "n_ref": 254 + }, + "3": { + "Dice": 0.9244186046511628, + "FN": 0, + "FP": 26, + "IoU": 0.8594594594594595, + "TN": 615, + "TP": 159, + "n_pred": 185, + "n_ref": 159 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8644688644688645, + "FN": 0, + "FP": 37, + "IoU": 0.7612903225806451, + "TN": 645, + "TP": 118, + "n_pred": 155, + "n_ref": 118 + }, + "3": { + "Dice": 0.9552238805970149, + "FN": 6, + "FP": 0, + "IoU": 0.9142857142857143, + "TN": 730, + "TP": 64, + "n_pred": 64, + "n_ref": 70 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9796116504854369, + "FN": 25, + "FP": 17, + "IoU": 0.9600380589914367, + "TN": 549, + "TP": 1009, + "n_pred": 1026, + "n_ref": 1034 + }, + "2": { + "Dice": 0.9113924050632911, + "FN": 14, + "FP": 42, + "IoU": 0.8372093023255814, + "TN": 1256, + "TP": 288, + "n_pred": 330, + "n_ref": 302 + }, + "3": { + "Dice": 0.9561586638830898, + "FN": 19, + "FP": 2, + "IoU": 0.916, + "TN": 1350, + "TP": 229, + "n_pred": 231, + "n_ref": 248 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 8, + "FP": 19, + "IoU": 0.0, + "TN": 1573, + "TP": 0, + "n_pred": 19, + "n_ref": 8 + }, + "2": { + "Dice": 0.8763358778625954, + "FN": 49, + "FP": 32, + "IoU": 0.779891304347826, + "TN": 1232, + "TP": 287, + "n_pred": 319, + "n_ref": 336 + }, + "3": { + "Dice": 0.8946236559139785, + "FN": 0, + "FP": 49, + "IoU": 0.8093385214007782, + "TN": 1343, + "TP": 208, + "n_pred": 257, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9632286995515695, + "FN": 3, + "FP": 38, + "IoU": 0.9290657439446367, + "TN": 222, + "TP": 537, + "n_pred": 575, + "n_ref": 540 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 614, + "FP": 0, + "IoU": 0.0, + "TN": 986, + "TP": 0, + "n_pred": 0, + "n_ref": 614 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.7496035966137469, + "FN": 20.0, + "FP": 13.946666666666667, + "IoU": 0.6590890592713808, + "TN": 989.5066666666667, + "TP": 128.54666666666665, + "n_pred": 142.49333333333334, + "n_ref": 148.54666666666665 + }, + "mean": { + "1": { + "Dice": 0.49007726360988596, + "FN": 16.84, + "FP": 10.0, + "IoU": 0.38372331181921054, + "TN": 1109.48, + "TP": 15.68, + "n_pred": 25.68, + "n_ref": 32.52 + }, + "2": { + "Dice": 0.872120242223726, + "FN": 24.0, + "FP": 25.76, + "IoU": 0.7770260041059671, + "TN": 912.12, + "TP": 190.12, + "n_pred": 215.88, + "n_ref": 214.12 + }, + "3": { + "Dice": 0.8866132840076286, + "FN": 19.16, + "FP": 6.08, + "IoU": 0.8165178618889648, + "TN": 946.92, + "TP": 179.84, + "n_pred": 185.92, + "n_ref": 199.0 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8156996587030717, + "FN": 87, + "FP": 21, + "IoU": 0.6887608069164265, + "TN": 453, + "TP": 239, + "n_pred": 260, + "n_ref": 326 + }, + "3": { + "Dice": 0.4642857142857143, + "FN": 29, + "FP": 1, + "IoU": 0.3023255813953488, + "TN": 757, + "TP": 13, + "n_pred": 14, + "n_ref": 42 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.616822429906542, + "FN": 111, + "FP": 12, + "IoU": 0.44594594594594594, + "TN": 1378, + "TP": 99, + "n_pred": 111, + "n_ref": 210 + }, + "2": { + "Dice": 0.9449236894492369, + "FN": 20, + "FP": 63, + "IoU": 0.8955974842767296, + "TN": 805, + "TP": 712, + "n_pred": 775, + "n_ref": 732 + }, + "3": { + "Dice": 0.971027216856892, + "FN": 13, + "FP": 20, + "IoU": 0.9436860068259386, + "TN": 1014, + "TP": 553, + "n_pred": 573, + "n_ref": 566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49907578558225507, + "FN": 271, + "FP": 0, + "IoU": 0.33251231527093594, + "TN": 394, + "TP": 135, + "n_pred": 135, + "n_ref": 406 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8787878787878788, + "FN": 50, + "FP": 14, + "IoU": 0.7837837837837838, + "TN": 1304, + "TP": 232, + "n_pred": 246, + "n_ref": 282 + }, + "3": { + "Dice": 0.8918032786885246, + "FN": 0, + "FP": 33, + "IoU": 0.8047337278106509, + "TN": 1431, + "TP": 136, + "n_pred": 169, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6557377049180327, + "FN": 4, + "FP": 17, + "IoU": 0.4878048780487805, + "TN": 1559, + "TP": 20, + "n_pred": 37, + "n_ref": 24 + }, + "2": { + "Dice": 0.8520814880425155, + "FN": 51, + "FP": 116, + "IoU": 0.7422839506172839, + "TN": 952, + "TP": 481, + "n_pred": 597, + "n_ref": 532 + }, + "3": { + "Dice": 0.8807134894091416, + "FN": 99, + "FP": 8, + "IoU": 0.7868525896414342, + "TN": 1098, + "TP": 395, + "n_pred": 403, + "n_ref": 494 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8130563798219584, + "FN": 31, + "FP": 32, + "IoU": 0.685, + "TN": 1400, + "TP": 137, + "n_pred": 169, + "n_ref": 168 + }, + "3": { + "Dice": 0.9733333333333334, + "FN": 32, + "FP": 0, + "IoU": 0.948051948051948, + "TN": 984, + "TP": 584, + "n_pred": 584, + "n_ref": 616 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7662650602409639, + "FN": 71, + "FP": 26, + "IoU": 0.62109375, + "TN": 544, + "TP": 159, + "n_pred": 185, + "n_ref": 230 + }, + "3": { + "Dice": 0.974559686888454, + "FN": 26, + "FP": 0, + "IoU": 0.950381679389313, + "TN": 276, + "TP": 498, + "n_pred": 498, + "n_ref": 524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9242718446601942, + "FN": 28, + "FP": 11, + "IoU": 0.8592057761732852, + "TN": 523, + "TP": 238, + "n_pred": 249, + "n_ref": 266 + }, + "3": { + "Dice": 0.957983193277311, + "FN": 11, + "FP": 4, + "IoU": 0.9193548387096774, + "TN": 614, + "TP": 171, + "n_pred": 175, + "n_ref": 182 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 1, + "FP": 48, + "IoU": 0.0, + "TN": 2351, + "TP": 0, + "n_pred": 48, + "n_ref": 1 + }, + "2": { + "Dice": 0.8937452901281085, + "FN": 93, + "FP": 48, + "IoU": 0.8079019073569482, + "TN": 1666, + "TP": 593, + "n_pred": 641, + "n_ref": 686 + }, + "3": { + "Dice": 0.9070866141732283, + "FN": 23, + "FP": 36, + "IoU": 0.829971181556196, + "TN": 2053, + "TP": 288, + "n_pred": 324, + "n_ref": 311 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9284009546539379, + "FN": 1, + "FP": 59, + "IoU": 0.8663697104677061, + "TN": 1151, + "TP": 389, + "n_pred": 448, + "n_ref": 390 + }, + "3": { + "Dice": 0.9263157894736842, + "FN": 42, + "FP": 0, + "IoU": 0.8627450980392157, + "TN": 1294, + "TP": 264, + "n_pred": 264, + "n_ref": 306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8211009174311926, + "FN": 41, + "FP": 37, + "IoU": 0.6964980544747081, + "TN": 1343, + "TP": 179, + "n_pred": 216, + "n_ref": 220 + }, + "3": { + "Dice": 0.9484848484848485, + "FN": 33, + "FP": 1, + "IoU": 0.9020172910662824, + "TN": 1253, + "TP": 313, + "n_pred": 314, + "n_ref": 346 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8823529411764706, + "FN": 4, + "FP": 36, + "IoU": 0.7894736842105263, + "TN": 1410, + "TP": 150, + "n_pred": 186, + "n_ref": 154 + }, + "3": { + "Dice": 0.9770114942528736, + "FN": 24, + "FP": 0, + "IoU": 0.9550561797752809, + "TN": 1066, + "TP": 510, + "n_pred": 510, + "n_ref": 534 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 152, + "IoU": 0.0, + "TN": 648, + "TP": 0, + "n_pred": 152, + "n_ref": 0 + }, + "2": { + "Dice": 0.9607535321821036, + "FN": 20, + "FP": 5, + "IoU": 0.9244712990936556, + "TN": 469, + "TP": 306, + "n_pred": 311, + "n_ref": 326 + }, + "3": { + "Dice": 0.8979591836734694, + "FN": 0, + "FP": 10, + "IoU": 0.8148148148148148, + "TN": 746, + "TP": 44, + "n_pred": 54, + "n_ref": 44 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7972027972027972, + "FN": 26, + "FP": 3, + "IoU": 0.6627906976744186, + "TN": 714, + "TP": 57, + "n_pred": 60, + "n_ref": 83 + }, + "2": { + "Dice": 0.8624708624708625, + "FN": 23, + "FP": 36, + "IoU": 0.7581967213114754, + "TN": 556, + "TP": 185, + "n_pred": 221, + "n_ref": 208 + }, + "3": { + "Dice": 0.9433198380566802, + "FN": 20, + "FP": 8, + "IoU": 0.89272030651341, + "TN": 539, + "TP": 233, + "n_pred": 241, + "n_ref": 253 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8598848368522073, + "FN": 23, + "FP": 50, + "IoU": 0.7542087542087542, + "TN": 503, + "TP": 224, + "n_pred": 274, + "n_ref": 247 + }, + "3": { + "Dice": 0.6946107784431138, + "FN": 50, + "FP": 1, + "IoU": 0.5321100917431193, + "TN": 691, + "TP": 58, + "n_pred": 59, + "n_ref": 108 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8617021276595744, + "FN": 8, + "FP": 18, + "IoU": 0.7570093457943925, + "TN": 1493, + "TP": 81, + "n_pred": 99, + "n_ref": 89 + }, + "2": { + "Dice": 0.8780082987551867, + "FN": 57, + "FP": 90, + "IoU": 0.7825443786982249, + "TN": 924, + "TP": 529, + "n_pred": 619, + "n_ref": 586 + }, + "3": { + "Dice": 0.8907048008171604, + "FN": 77, + "FP": 30, + "IoU": 0.8029465930018416, + "TN": 1057, + "TP": 436, + "n_pred": 466, + "n_ref": 513 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.793120113129374, + "FN": 35.13333333333333, + "FP": 22.173333333333336, + "IoU": 0.7068796102544184, + "TN": 966.6933333333333, + "TP": 192.0, + "n_pred": 214.17333333333332, + "n_ref": 227.13333333333333 + }, + "mean": { + "1": { + "Dice": 0.6936405442786393, + "FN": 59.76, + "FP": 18.28, + "IoU": 0.6124103944981162, + "TN": 931.44, + "TP": 206.52, + "n_pred": 224.8, + "n_ref": 266.28 + }, + "2": { + "Dice": 0.764251853428059, + "FN": 32.84, + "FP": 32.6, + "IoU": 0.649217602762081, + "TN": 1008.88, + "TP": 141.68, + "n_pred": 174.28, + "n_ref": 174.52 + }, + "3": { + "Dice": 0.9214679416814237, + "FN": 12.8, + "FP": 15.64, + "IoU": 0.8590108335030581, + "TN": 959.76, + "TP": 227.8, + "n_pred": 243.44, + "n_ref": 240.6 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6234413965087282, + "FN": 139, + "FP": 12, + "IoU": 0.4528985507246377, + "TN": 1324, + "TP": 125, + "n_pred": 137, + "n_ref": 264 + }, + "3": { + "Dice": 0.9553264604810997, + "FN": 12, + "FP": 105, + "IoU": 0.9144736842105263, + "TN": 232, + "TP": 1251, + "n_pred": 1356, + "n_ref": 1263 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8782287822878229, + "FN": 52, + "FP": 80, + "IoU": 0.7828947368421053, + "TN": 992, + "TP": 476, + "n_pred": 556, + "n_ref": 528 + }, + "3": { + "Dice": 0.9313304721030042, + "FN": 20, + "FP": 44, + "IoU": 0.8714859437751004, + "TN": 1102, + "TP": 434, + "n_pred": 478, + "n_ref": 454 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8986301369863013, + "FN": 25, + "FP": 12, + "IoU": 0.8159203980099502, + "TN": 599, + "TP": 164, + "n_pred": 176, + "n_ref": 189 + }, + "2": { + "Dice": 0.8934426229508197, + "FN": 28, + "FP": 24, + "IoU": 0.8074074074074075, + "TN": 530, + "TP": 218, + "n_pred": 242, + "n_ref": 246 + }, + "3": { + "Dice": 0.9099099099099099, + "FN": 19, + "FP": 1, + "IoU": 0.8347107438016529, + "TN": 679, + "TP": 101, + "n_pred": 102, + "n_ref": 120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 104, + "IoU": 0.0, + "TN": 696, + "TP": 0, + "n_pred": 104, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5619266055045872, + "FN": 730, + "FP": 34, + "IoU": 0.39074960127591707, + "TN": 1146, + "TP": 490, + "n_pred": 524, + "n_ref": 1220 + }, + "2": { + "Dice": 0.75, + "FN": 6, + "FP": 94, + "IoU": 0.6, + "TN": 2150, + "TP": 150, + "n_pred": 244, + "n_ref": 156 + }, + "3": { + "Dice": 0.9387755102040817, + "FN": 0, + "FP": 6, + "IoU": 0.8846153846153846, + "TN": 2348, + "TP": 46, + "n_pred": 52, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 90, + "FP": 0, + "IoU": 0.0, + "TN": 1510, + "TP": 0, + "n_pred": 0, + "n_ref": 90 + }, + "2": { + "Dice": 0.7765830346475507, + "FN": 65, + "FP": 122, + "IoU": 0.634765625, + "TN": 1088, + "TP": 325, + "n_pred": 447, + "n_ref": 390 + }, + "3": { + "Dice": 0.9328474752732951, + "FN": 30, + "FP": 99, + "IoU": 0.8741463414634146, + "TN": 575, + "TP": 896, + "n_pred": 995, + "n_ref": 926 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8719611021069692, + "FN": 79, + "FP": 0, + "IoU": 0.7729885057471264, + "TN": 2052, + "TP": 269, + "n_pred": 269, + "n_ref": 348 + }, + "2": { + "Dice": 0.8246913580246914, + "FN": 194, + "FP": 19, + "IoU": 0.7016806722689075, + "TN": 1686, + "TP": 501, + "n_pred": 520, + "n_ref": 695 + }, + "3": { + "Dice": 0.9055374592833876, + "FN": 12, + "FP": 75, + "IoU": 0.8273809523809523, + "TN": 1896, + "TP": 417, + "n_pred": 492, + "n_ref": 429 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9154113557358053, + "FN": 70, + "FP": 3, + "IoU": 0.844017094017094, + "TN": 332, + "TP": 395, + "n_pred": 398, + "n_ref": 465 + }, + "2": { + "Dice": 0.6666666666666666, + "FN": 2, + "FP": 0, + "IoU": 0.5, + "TN": 796, + "TP": 2, + "n_pred": 2, + "n_ref": 4 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7843137254901961, + "FN": 99, + "FP": 33, + "IoU": 0.6451612903225806, + "TN": 428, + "TP": 240, + "n_pred": 273, + "n_ref": 339 + }, + "2": { + "Dice": 0.8978328173374613, + "FN": 29, + "FP": 37, + "IoU": 0.8146067415730337, + "TN": 444, + "TP": 290, + "n_pred": 327, + "n_ref": 319 + }, + "3": { + "Dice": 0.8518518518518519, + "FN": 17, + "FP": 7, + "IoU": 0.7419354838709677, + "TN": 707, + "TP": 69, + "n_pred": 76, + "n_ref": 86 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9537037037037037, + "FN": 20, + "FP": 20, + "IoU": 0.911504424778761, + "TN": 348, + "TP": 412, + "n_pred": 432, + "n_ref": 432 + }, + "2": { + "Dice": 0.7661971830985915, + "FN": 58, + "FP": 25, + "IoU": 0.6210045662100456, + "TN": 581, + "TP": 136, + "n_pred": 161, + "n_ref": 194 + }, + "3": { + "Dice": 0.9226006191950464, + "FN": 25, + "FP": 0, + "IoU": 0.8563218390804598, + "TN": 626, + "TP": 149, + "n_pred": 149, + "n_ref": 174 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9966832504145937, + "FN": 3, + "FP": 1, + "IoU": 0.9933884297520661, + "TN": 995, + "TP": 601, + "n_pred": 602, + "n_ref": 604 + }, + "2": { + "Dice": 0.9727891156462585, + "FN": 5, + "FP": 3, + "IoU": 0.9470198675496688, + "TN": 1449, + "TP": 143, + "n_pred": 146, + "n_ref": 148 + }, + "3": { + "Dice": 0.96, + "FN": 0, + "FP": 4, + "IoU": 0.9230769230769231, + "TN": 1548, + "TP": 48, + "n_pred": 52, + "n_ref": 48 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8, + "FN": 34, + "FP": 18, + "IoU": 0.6666666666666666, + "TN": 644, + "TP": 104, + "n_pred": 122, + "n_ref": 138 + }, + "2": { + "Dice": 0.8990476190476191, + "FN": 14, + "FP": 39, + "IoU": 0.8166089965397924, + "TN": 511, + "TP": 236, + "n_pred": 275, + "n_ref": 250 + }, + "3": { + "Dice": 0.9798657718120806, + "FN": 1, + "FP": 14, + "IoU": 0.9605263157894737, + "TN": 420, + "TP": 365, + "n_pred": 379, + "n_ref": 366 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 109, + "IoU": 0.0, + "TN": 691, + "TP": 0, + "n_pred": 109, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8814285714285715, + "FN": 156, + "FP": 10, + "IoU": 0.7879948914431673, + "TN": 17, + "TP": 617, + "n_pred": 627, + "n_ref": 773 + }, + "2": { + "Dice": 0.7727272727272727, + "FN": 10, + "FP": 0, + "IoU": 0.6296296296296297, + "TN": 773, + "TP": 17, + "n_pred": 17, + "n_ref": 27 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7317073170731707, + "FN": 152, + "FP": 2, + "IoU": 0.5769230769230769, + "TN": 436, + "TP": 210, + "n_pred": 212, + "n_ref": 362 + }, + "2": { + "Dice": 0.8758620689655172, + "FN": 23, + "FP": 13, + "IoU": 0.7791411042944786, + "TN": 637, + "TP": 127, + "n_pred": 140, + "n_ref": 150 + }, + "3": { + "Dice": 0.9688581314878892, + "FN": 6, + "FP": 3, + "IoU": 0.9395973154362416, + "TN": 651, + "TP": 140, + "n_pred": 143, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7936507936507936, + "FN": 7, + "FP": 6, + "IoU": 0.6578947368421053, + "TN": 1562, + "TP": 25, + "n_pred": 31, + "n_ref": 32 + }, + "3": { + "Dice": 0.9928245270711024, + "FN": 4, + "FP": 7, + "IoU": 0.9857512953367875, + "TN": 828, + "TP": 761, + "n_pred": 768, + "n_ref": 765 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.75, + "FN": 8, + "FP": 0, + "IoU": 0.6, + "TN": 780, + "TP": 12, + "n_pred": 12, + "n_ref": 20 + }, + "2": { + "Dice": 0.7536945812807881, + "FN": 0, + "FP": 100, + "IoU": 0.6047430830039525, + "TN": 547, + "TP": 153, + "n_pred": 253, + "n_ref": 153 + }, + "3": { + "Dice": 0.9411764705882353, + "FN": 62, + "FP": 0, + "IoU": 0.8888888888888888, + "TN": 242, + "TP": 496, + "n_pred": 496, + "n_ref": 558 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 793, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7475728155339806, + "FN": 20, + "FP": 32, + "IoU": 0.5968992248062015, + "TN": 1471, + "TP": 77, + "n_pred": 109, + "n_ref": 97 + }, + "2": { + "Dice": 0.7326388888888888, + "FN": 72, + "FP": 82, + "IoU": 0.5780821917808219, + "TN": 1235, + "TP": 211, + "n_pred": 293, + "n_ref": 283 + }, + "3": { + "Dice": 0.770949720670391, + "FN": 78, + "FP": 4, + "IoU": 0.6272727272727273, + "TN": 1380, + "TP": 138, + "n_pred": 142, + "n_ref": 216 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9260143198090692, + "FN": 2, + "FP": 153, + "IoU": 0.8622222222222222, + "TN": 475, + "TP": 970, + "n_pred": 1123, + "n_ref": 972 + }, + "2": { + "Dice": 0.7511520737327189, + "FN": 106, + "FP": 2, + "IoU": 0.6014760147601476, + "TN": 1329, + "TP": 163, + "n_pred": 165, + "n_ref": 269 + }, + "3": { + "Dice": 0.8395061728395061, + "FN": 1, + "FP": 12, + "IoU": 0.723404255319149, + "TN": 1553, + "TP": 34, + "n_pred": 46, + "n_ref": 35 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9725363489499192, + "FN": 6, + "FP": 28, + "IoU": 0.9465408805031447, + "TN": 1764, + "TP": 602, + "n_pred": 630, + "n_ref": 608 + }, + "2": { + "Dice": 0.8921389396709324, + "FN": 11, + "FP": 48, + "IoU": 0.8052805280528053, + "TN": 2097, + "TP": 244, + "n_pred": 292, + "n_ref": 255 + }, + "3": { + "Dice": 0.9421265141318977, + "FN": 33, + "FP": 10, + "IoU": 0.8905852417302799, + "TN": 2007, + "TP": 350, + "n_pred": 360, + "n_ref": 383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863414/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.7229993535976021, + "FN": 25.107333333333333, + "FP": 22.41, + "IoU": 0.6441544956261097, + "TN": 959.3717777777778, + "TP": 154.17755555555556, + "n_pred": 176.58755555555553, + "n_ref": 179.28488888888887 + }, + "mean": { + "1": { + "Dice": 0.5492947495313998, + "FN": 32.102999999999994, + "FP": 20.020666666666664, + "IoU": 0.4772097705480178, + "TN": 992.5096666666668, + "TP": 116.43333333333332, + "n_pred": 136.454, + "n_ref": 148.53633333333332 + }, + "2": { + "Dice": 0.7916913444224378, + "FN": 28.27733333333333, + "FP": 28.540000000000003, + "IoU": 0.6907950544487647, + "TN": 944.3796666666667, + "TP": 159.86966666666666, + "n_pred": 188.40966666666665, + "n_ref": 188.147 + }, + "3": { + "Dice": 0.8280119668389686, + "FN": 14.941666666666666, + "FP": 18.669333333333334, + "IoU": 0.7644586618815469, + "TN": 941.226, + "TP": 186.22966666666667, + "n_pred": 204.89899999999997, + "n_ref": 201.17133333333334 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_003/summary.json b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_003/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..fb7b84894683119b96f9f01927476dbb5caf9be7 --- /dev/null +++ b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_003/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.7894554045317493, + "FN": 1254.5266666666666, + "FP": 2824.1066666666666, + "IoU": 0.6786887886715212, + "TN": 841410.4199999999, + "TP": 8939.586666666668, + "n_pred": 11763.693333333335, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.692541570668586, + "FN": 1615.02, + "FP": 4442.38, + "IoU": 0.5579402690355056, + "TN": 840132.2, + "TP": 8239.04, + "n_pred": 12681.42, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.796615727016035, + "FN": 1605.3, + "FP": 2434.78, + "IoU": 0.6754512286559579, + "TN": 841938.36, + "TP": 8450.2, + "n_pred": 10884.98, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8792089159106269, + "FN": 543.26, + "FP": 1595.16, + "IoU": 0.8026748683231001, + "TN": 842160.7, + "TP": 10129.52, + "n_pred": 11724.68, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8041990309928478, + "FN": 989, + "FP": 4103, + "IoU": 0.6725191330632195, + "TN": 1090371, + "TP": 10457, + "n_pred": 14560, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8367190876749676, + "FN": 873, + "FP": 4038, + "IoU": 0.7192751800617354, + "TN": 1088426, + "TP": 12583, + "n_pred": 16621, + "n_ref": 13456 + }, + "3": { + "Dice": 0.937336077149659, + "FN": 978, + "FP": 2128, + "IoU": 0.8820625759416768, + "TN": 1079584, + "TP": 23230, + "n_pred": 25358, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6054495565056474, + "FN": 134, + "FP": 6049, + "IoU": 0.4341539306305482, + "TN": 1094993, + "TP": 4744, + "n_pred": 10793, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8687627952455159, + "FN": 1764, + "FP": 2531, + "IoU": 0.7679757981740587, + "TN": 1087409, + "TP": 14216, + "n_pred": 16747, + "n_ref": 15980 + }, + "3": { + "Dice": 0.914239397584061, + "FN": 999, + "FP": 2281, + "IoU": 0.8420266820786977, + "TN": 1085157, + "TP": 17483, + "n_pred": 19764, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5858834132153538, + "FN": 1719, + "FP": 8390, + "IoU": 0.4143105446118192, + "TN": 892180, + "TP": 7151, + "n_pred": 15541, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8956692913385826, + "FN": 1501, + "FP": 1361, + "IoU": 0.8110516934046346, + "TN": 894293, + "TP": 12285, + "n_pred": 13646, + "n_ref": 13786 + }, + "3": { + "Dice": 0.972895393157969, + "FN": 737, + "FP": 415, + "IoU": 0.9472213313785678, + "TN": 887613, + "TP": 20675, + "n_pred": 21090, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4149340882951429, + "FN": 2288, + "FP": 10938, + "IoU": 0.2617771824067872, + "TN": 891524, + "TP": 4690, + "n_pred": 15628, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8907757885763001, + "FN": 1263, + "FP": 1940, + "IoU": 0.8030619773733398, + "TN": 893176, + "TP": 13061, + "n_pred": 15001, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9680851063829787, + "FN": 798, + "FP": 378, + "IoU": 0.9381443298969072, + "TN": 890428, + "TP": 17836, + "n_pred": 18214, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8809912512034828, + "FN": 3132, + "FP": 2554, + "IoU": 0.7872961244949873, + "TN": 1399028, + "TP": 21046, + "n_pred": 23600, + "n_ref": 24178 + }, + "2": { + "Dice": 0.811813106082868, + "FN": 1271, + "FP": 5133, + "IoU": 0.6832368798535886, + "TN": 1405543, + "TP": 13813, + "n_pred": 18946, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9618628167400707, + "FN": 925, + "FP": 1006, + "IoU": 0.9265276615173883, + "TN": 1399478, + "TP": 24351, + "n_pred": 25357, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7864349636827884, + "FN": 1688, + "FP": 6927, + "IoU": 0.6480369326306329, + "TN": 1401283, + "TP": 15862, + "n_pred": 22789, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8027583062631789, + "FN": 982, + "FP": 5940, + "IoU": 0.6705064737242955, + "TN": 1404752, + "TP": 14086, + "n_pred": 20026, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9483231941668679, + "FN": 1110, + "FP": 1243, + "IoU": 0.9017249300421836, + "TN": 1401817, + "TP": 21590, + "n_pred": 22833, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8369471876341777, + "FN": 1461, + "FP": 1577, + "IoU": 0.7196123673281034, + "TN": 751213, + "TP": 7797, + "n_pred": 9374, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8428614187369051, + "FN": 962, + "FP": 2188, + "IoU": 0.7284014485256078, + "TN": 750450, + "TP": 8448, + "n_pred": 10636, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9632555806370705, + "FN": 654, + "FP": 518, + "IoU": 0.9291157614612314, + "TN": 745514, + "TP": 15362, + "n_pred": 15880, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6914783164284003, + "FN": 589, + "FP": 3274, + "IoU": 0.5284423828125, + "TN": 753856, + "TP": 4329, + "n_pred": 7603, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8528453470207543, + "FN": 1684, + "FP": 1613, + "IoU": 0.7434440899540892, + "TN": 749197, + "TP": 9554, + "n_pred": 11167, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9298821880611395, + "FN": 1296, + "FP": 305, + "IoU": 0.8689530981419333, + "TN": 749831, + "TP": 10616, + "n_pred": 10921, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.810485012742203, + "FN": 3826, + "FP": 859, + "IoU": 0.6813575460790315, + "TN": 1063569, + "TP": 10018, + "n_pred": 10877, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8592959841348538, + "FN": 1204, + "FP": 1634, + "IoU": 0.7533031988873435, + "TN": 1066768, + "TP": 8666, + "n_pred": 10300, + "n_ref": 9870 + }, + "3": { + "Dice": 0.958829109635452, + "FN": 716, + "FP": 803, + "IoU": 0.9209142500130161, + "TN": 1059065, + "TP": 17688, + "n_pred": 18491, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8261511942871214, + "FN": 3231, + "FP": 1005, + "IoU": 0.7037969372771135, + "TN": 1063971, + "TP": 10065, + "n_pred": 11070, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8532041027571281, + "FN": 1733, + "FP": 1387, + "IoU": 0.7439894970050054, + "TN": 1066085, + "TP": 9067, + "n_pred": 10454, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9454381093820624, + "FN": 584, + "FP": 1106, + "IoU": 0.8965221650747, + "TN": 1061940, + "TP": 14642, + "n_pred": 15748, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5858921161825726, + "FN": 2778, + "FP": 6204, + "IoU": 0.41431924882629106, + "TN": 1090584, + "TP": 6354, + "n_pred": 12558, + "n_ref": 9132 + }, + "2": { + "Dice": 0.7906959350809618, + "FN": 910, + "FP": 4687, + "IoU": 0.6538437751252396, + "TN": 1089751, + "TP": 10572, + "n_pred": 15259, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8771812080536913, + "FN": 1040, + "FP": 1888, + "IoU": 0.7812313209802749, + "TN": 1092536, + "TP": 10456, + "n_pred": 12344, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.36200414332847386, + "FN": 693, + "FP": 7622, + "IoU": 0.2210043095371932, + "TN": 1095246, + "TP": 2359, + "n_pred": 9981, + "n_ref": 3052 + }, + "2": { + "Dice": 0.793301043727403, + "FN": 723, + "FP": 5337, + "IoU": 0.657414212222285, + "TN": 1088231, + "TP": 11629, + "n_pred": 16966, + "n_ref": 12352 + }, + "3": { + "Dice": 0.678864070041531, + "FN": 256, + "FP": 2605, + "IoU": 0.5138487680543755, + "TN": 1100035, + "TP": 3024, + "n_pred": 5629, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8716985071510596, + "FN": 814, + "FP": 1644, + "IoU": 0.7725758697261288, + "TN": 1136072, + "TP": 8350, + "n_pred": 9994, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8514675052410902, + "FN": 3170, + "FP": 2498, + "IoU": 0.7413525600073013, + "TN": 1124966, + "TP": 16246, + "n_pred": 18744, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9259687680740313, + "FN": 723, + "FP": 1069, + "IoU": 0.8621432417878299, + "TN": 1133881, + "TP": 11207, + "n_pred": 12276, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.15806988352745424, + "FN": 1896, + "FP": 4176, + "IoU": 0.08581752484191509, + "TN": 1140238, + "TP": 570, + "n_pred": 4746, + "n_ref": 2466 + }, + "2": { + "Dice": 0.3625839996075931, + "FN": 17044, + "FP": 8946, + "IoU": 0.22143670241447486, + "TN": 1113498, + "TP": 7392, + "n_pred": 16338, + "n_ref": 24436 + }, + "3": { + "Dice": 0.22915259959486833, + "FN": 1, + "FP": 18265, + "IoU": 0.12940279300319338, + "TN": 1125899, + "TP": 2715, + "n_pred": 20980, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9034953796705504, + "FN": 602, + "FP": 1800, + "IoU": 0.8239777224094973, + "TN": 787154, + "TP": 11244, + "n_pred": 13044, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8587147637683625, + "FN": 1064, + "FP": 1427, + "IoU": 0.7524102971871584, + "TN": 790739, + "TP": 7570, + "n_pred": 8997, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9494322837410746, + "FN": 542, + "FP": 322, + "IoU": 0.9037325905292479, + "TN": 791825, + "TP": 8111, + "n_pred": 8433, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5046888320545609, + "FN": 387, + "FP": 6585, + "IoU": 0.33751425313568983, + "TN": 790276, + "TP": 3552, + "n_pred": 10137, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8679089709762533, + "FN": 2126, + "FP": 1078, + "IoU": 0.7666423889293518, + "TN": 787070, + "TP": 10526, + "n_pred": 11604, + "n_ref": 12652 + }, + "3": { + "Dice": 0.7907044299201162, + "FN": 124, + "FP": 1317, + "IoU": 0.6538553927456161, + "TN": 796637, + "TP": 2722, + "n_pred": 4039, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8995811625293697, + "FN": 983, + "FP": 1966, + "IoU": 0.8174897883401411, + "TN": 1331682, + "TP": 13209, + "n_pred": 15175, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8697274423260681, + "FN": 1049, + "FP": 1814, + "IoU": 0.7694847020933977, + "TN": 1335420, + "TP": 9557, + "n_pred": 11371, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9707995365005794, + "FN": 572, + "FP": 436, + "IoU": 0.9432560234181491, + "TN": 1330076, + "TP": 16756, + "n_pred": 17192, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5776984460310793, + "FN": 366, + "FP": 7678, + "IoU": 0.4061715635611989, + "TN": 1334294, + "TP": 5502, + "n_pred": 13180, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8658371221185291, + "FN": 1259, + "FP": 2105, + "IoU": 0.7634151487446375, + "TN": 1333621, + "TP": 10855, + "n_pred": 12960, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9364137346333192, + "FN": 573, + "FP": 927, + "IoU": 0.8804304503786369, + "TN": 1335295, + "TP": 11045, + "n_pred": 11972, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8559783643774045, + "FN": 1226, + "FP": 2555, + "IoU": 0.7482186854897782, + "TN": 836951, + "TP": 11236, + "n_pred": 13791, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8391891208735656, + "FN": 1148, + "FP": 2033, + "IoU": 0.7229335423743576, + "TN": 840487, + "TP": 8300, + "n_pred": 10333, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9613917624783909, + "FN": 970, + "FP": 437, + "IoU": 0.9256538969616909, + "TN": 833043, + "TP": 17518, + "n_pred": 17955, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7826908541194255, + "FN": 725, + "FP": 2725, + "IoU": 0.6429680223533064, + "TN": 842305, + "TP": 6213, + "n_pred": 8938, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8644411168854047, + "FN": 1478, + "FP": 1600, + "IoU": 0.7612472851380702, + "TN": 839076, + "TP": 9814, + "n_pred": 11414, + "n_ref": 11292 + }, + "3": { + "Dice": 0.934686502902395, + "FN": 839, + "FP": 860, + "IoU": 0.8773816397228638, + "TN": 838112, + "TP": 12157, + "n_pred": 13017, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6987620357634112, + "FN": 1538, + "FP": 2185, + "IoU": 0.5369978858350951, + "TN": 843927, + "TP": 4318, + "n_pred": 6503, + "n_ref": 5856 + }, + "2": { + "Dice": 0.810951426500064, + "FN": 1212, + "FP": 3221, + "IoU": 0.6820170719460584, + "TN": 838027, + "TP": 9508, + "n_pred": 12729, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9179537468333742, + "FN": 1723, + "FP": 285, + "IoU": 0.8483498225209576, + "TN": 838727, + "TP": 11233, + "n_pred": 11518, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4110787172011662, + "FN": 412, + "FP": 4436, + "IoU": 0.25871559633027524, + "TN": 845428, + "TP": 1692, + "n_pred": 6128, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8314153340307876, + "FN": 1460, + "FP": 3052, + "IoU": 0.711472055250032, + "TN": 836330, + "TP": 11126, + "n_pred": 14178, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9169964944023521, + "FN": 637, + "FP": 831, + "IoU": 0.8467160906338101, + "TN": 842391, + "TP": 8109, + "n_pred": 8940, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6155367124225256, + "FN": 4994, + "FP": 5117, + "IoU": 0.44460313100796484, + "TN": 778835, + "TP": 8094, + "n_pred": 13211, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7813242956143457, + "FN": 1131, + "FP": 3192, + "IoU": 0.6411256848746472, + "TN": 784994, + "TP": 7723, + "n_pred": 10915, + "n_ref": 8854 + }, + "3": { + "Dice": 0.8891907769129094, + "FN": 1349, + "FP": 1669, + "IoU": 0.8004891915118661, + "TN": 781913, + "TP": 12109, + "n_pred": 13778, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4902934999743892, + "FN": 2882, + "FP": 7069, + "IoU": 0.32476080613422, + "TN": 782303, + "TP": 4786, + "n_pred": 11855, + "n_ref": 7668 + }, + "2": { + "Dice": 0.7972595078299777, + "FN": 1069, + "FP": 3281, + "IoU": 0.6628691002092537, + "TN": 784137, + "TP": 8553, + "n_pred": 11834, + "n_ref": 9622 + }, + "3": { + "Dice": 0.8086621180658559, + "FN": 854, + "FP": 3016, + "IoU": 0.6787848605577689, + "TN": 784992, + "TP": 8178, + "n_pred": 11194, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7879544823757979, + "FN": 1112, + "FP": 5000, + "IoU": 0.6501030455690405, + "TN": 879202, + "TP": 11356, + "n_pred": 16356, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7820691645423501, + "FN": 2208, + "FP": 2323, + "IoU": 0.6421293736671669, + "TN": 884009, + "TP": 8130, + "n_pred": 10453, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9100564971751413, + "FN": 171, + "FP": 2217, + "IoU": 0.8349574953348539, + "TN": 882201, + "TP": 12081, + "n_pred": 14298, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5215776841914594, + "FN": 597, + "FP": 9968, + "IoU": 0.35279343298211224, + "TN": 880346, + "TP": 5759, + "n_pred": 15727, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8236066722122499, + "FN": 2112, + "FP": 1917, + "IoU": 0.7001116486788239, + "TN": 883235, + "TP": 9406, + "n_pred": 11323, + "n_ref": 11518 + }, + "3": { + "Dice": 0.8779910461585962, + "FN": 295, + "FP": 2076, + "IoU": 0.7825169693634195, + "TN": 885768, + "TP": 8531, + "n_pred": 10607, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8076666273909116, + "FN": 938, + "FP": 3959, + "IoU": 0.6773832268265366, + "TN": 746869, + "TP": 10282, + "n_pred": 14241, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9151783588131638, + "FN": 804, + "FP": 977, + "IoU": 0.8436210378435333, + "TN": 750659, + "TP": 9608, + "n_pred": 10585, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9740827147401909, + "FN": 270, + "FP": 341, + "IoU": 0.9494749028363516, + "TN": 749955, + "TP": 11482, + "n_pred": 11823, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.25849509624384487, + "FN": 616, + "FP": 17605, + "IoU": 0.14843202318081974, + "TN": 740651, + "TP": 3176, + "n_pred": 20781, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8488992808929281, + "FN": 2011, + "FP": 1414, + "IoU": 0.7374674229648934, + "TN": 749002, + "TP": 9621, + "n_pred": 11035, + "n_ref": 11632 + }, + "3": { + "Dice": 0.8695040450228632, + "FN": 654, + "FP": 1201, + "IoU": 0.7691350342252644, + "TN": 754013, + "TP": 6180, + "n_pred": 7381, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6919473968654296, + "FN": 260, + "FP": 6580, + "IoU": 0.5289904971766974, + "TN": 980806, + "TP": 7682, + "n_pred": 14262, + "n_ref": 7942 + }, + "2": { + "Dice": 0.775230057450811, + "FN": 1124, + "FP": 3297, + "IoU": 0.6329597343295973, + "TN": 983283, + "TP": 7624, + "n_pred": 10921, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9642522269104548, + "FN": 92, + "FP": 1128, + "IoU": 0.9309720493380106, + "TN": 977654, + "TP": 16454, + "n_pred": 17582, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3804630510624802, + "FN": 243, + "FP": 9524, + "IoU": 0.23492088359705468, + "TN": 982562, + "TP": 2999, + "n_pred": 12523, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7360119047619048, + "FN": 915, + "FP": 4407, + "IoU": 0.5822933835648694, + "TN": 982587, + "TP": 7419, + "n_pred": 11826, + "n_ref": 8334 + }, + "3": { + "Dice": 0.866685933693902, + "FN": 118, + "FP": 3111, + "IoU": 0.764735883424408, + "TN": 981603, + "TP": 10496, + "n_pred": 13607, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9451210876646368, + "FN": 977, + "FP": 573, + "IoU": 0.8959522051419749, + "TN": 743119, + "TP": 13347, + "n_pred": 13920, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8812965891122656, + "FN": 1009, + "FP": 1093, + "IoU": 0.787783947501262, + "TN": 748111, + "TP": 7803, + "n_pred": 8896, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9679802955665024, + "FN": 298, + "FP": 430, + "IoU": 0.9379474940334129, + "TN": 746284, + "TP": 11004, + "n_pred": 11434, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5824505541607985, + "FN": 480, + "FP": 6339, + "IoU": 0.4108855291576674, + "TN": 746441, + "TP": 4756, + "n_pred": 11095, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8495808509516529, + "FN": 1275, + "FP": 1578, + "IoU": 0.7384967919340055, + "TN": 747106, + "TP": 8057, + "n_pred": 9635, + "n_ref": 9332 + }, + "3": { + "Dice": 0.7753696576868544, + "FN": 364, + "FP": 1854, + "IoU": 0.6331458815745947, + "TN": 751970, + "TP": 3828, + "n_pred": 5682, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8150739176346357, + "FN": 1771, + "FP": 1031, + "IoU": 0.6878689985518548, + "TN": 629999, + "TP": 6175, + "n_pred": 7206, + "n_ref": 7946 + }, + "2": { + "Dice": 0.6967313658994155, + "FN": 538, + "FP": 3665, + "IoU": 0.5346030339940206, + "TN": 629945, + "TP": 4828, + "n_pred": 8493, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9445935714777342, + "FN": 472, + "FP": 333, + "IoU": 0.8950045650189122, + "TN": 631309, + "TP": 6862, + "n_pred": 7195, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6578411405295316, + "FN": 113, + "FP": 2911, + "IoU": 0.49013657056145676, + "TN": 633045, + "TP": 2907, + "n_pred": 5818, + "n_ref": 3020 + }, + "2": { + "Dice": 0.8214307093684525, + "FN": 491, + "FP": 2492, + "IoU": 0.6969727752945957, + "TN": 629132, + "TP": 6861, + "n_pred": 9353, + "n_ref": 7352 + }, + "3": { + "Dice": 0.8048402109835557, + "FN": 162, + "FP": 1096, + "IoU": 0.6734164070612668, + "TN": 635124, + "TP": 2594, + "n_pred": 3690, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8578082709133253, + "FN": 1812, + "FP": 2706, + "IoU": 0.7510195084316102, + "TN": 964894, + "TP": 13628, + "n_pred": 16334, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8530499508449979, + "FN": 785, + "FP": 2354, + "IoU": 0.7437551020408163, + "TN": 970790, + "TP": 9111, + "n_pred": 11465, + "n_ref": 9896 + }, + "3": { + "Dice": 0.975761902972455, + "FN": 235, + "FP": 410, + "IoU": 0.9526709715292045, + "TN": 969412, + "TP": 12983, + "n_pred": 13393, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5753233830845771, + "FN": 406, + "FP": 8130, + "IoU": 0.4038273501885738, + "TN": 968722, + "TP": 5782, + "n_pred": 13912, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8335809094829651, + "FN": 1258, + "FP": 2215, + "IoU": 0.7146495768630351, + "TN": 970869, + "TP": 8698, + "n_pred": 10913, + "n_ref": 9956 + }, + "3": { + "Dice": 0.6456436200112423, + "FN": 247, + "FP": 6057, + "IoU": 0.4767161949032954, + "TN": 970993, + "TP": 5743, + "n_pred": 11800, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9046766041839933, + "FN": 2039, + "FP": 941, + "IoU": 0.8259447462180948, + "TN": 1031455, + "TP": 14141, + "n_pred": 15082, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8694086842679467, + "FN": 739, + "FP": 1655, + "IoU": 0.7689858149184599, + "TN": 1038213, + "TP": 7969, + "n_pred": 9624, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9570458472294773, + "FN": 351, + "FP": 718, + "IoU": 0.9176298351055633, + "TN": 1035598, + "TP": 11909, + "n_pred": 12627, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6628957805084195, + "FN": 332, + "FP": 4853, + "IoU": 0.4957697170086551, + "TN": 1038293, + "TP": 5098, + "n_pred": 9951, + "n_ref": 5430 + }, + "2": { + "Dice": 0.835648804460826, + "FN": 1480, + "FP": 1998, + "IoU": 0.7176948051948052, + "TN": 1036256, + "TP": 8842, + "n_pred": 10840, + "n_ref": 10322 + }, + "3": { + "Dice": 0.6957210776545166, + "FN": 251, + "FP": 3973, + "IoU": 0.5334143377885784, + "TN": 1039523, + "TP": 4829, + "n_pred": 8802, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6180525448712391, + "FN": 4034, + "FP": 4776, + "IoU": 0.44723302798343584, + "TN": 473278, + "TP": 7128, + "n_pred": 11904, + "n_ref": 11162 + }, + "2": { + "Dice": 0.6883280757097792, + "FN": 535, + "FP": 1441, + "IoU": 0.5247715247715248, + "TN": 485058, + "TP": 2182, + "n_pred": 3623, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9432489451476793, + "FN": 180, + "FP": 358, + "IoU": 0.8925933320023957, + "TN": 484207, + "TP": 4471, + "n_pred": 4829, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5430248097147173, + "FN": 1978, + "FP": 5887, + "IoU": 0.37270697080874143, + "TN": 476678, + "TP": 4673, + "n_pred": 10560, + "n_ref": 6651 + }, + "2": { + "Dice": 0.7914820637416036, + "FN": 591, + "FP": 868, + "IoU": 0.6549195837275308, + "TN": 484988, + "TP": 2769, + "n_pred": 3637, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8621291448516579, + "FN": 61, + "FP": 492, + "IoU": 0.7576687116564417, + "TN": 486934, + "TP": 1729, + "n_pred": 2221, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9087501615613287, + "FN": 1814, + "FP": 1010, + "IoU": 0.8327608669904063, + "TN": 463594, + "TP": 14062, + "n_pred": 15072, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7600355064602031, + "FN": 666, + "FP": 1767, + "IoU": 0.6129494113903914, + "TN": 474194, + "TP": 3853, + "n_pred": 5620, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9463886283281622, + "FN": 402, + "FP": 341, + "IoU": 0.8982331187508561, + "TN": 473179, + "TP": 6558, + "n_pred": 6899, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.897307205516519, + "FN": 1331, + "FP": 1022, + "IoU": 0.8137417873822528, + "TN": 467847, + "TP": 10280, + "n_pred": 11302, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8184995966657703, + "FN": 1096, + "FP": 929, + "IoU": 0.6927628584433319, + "TN": 473889, + "TP": 4566, + "n_pred": 5495, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8612809784357901, + "FN": 130, + "FP": 732, + "IoU": 0.756359525155455, + "TN": 476942, + "TP": 2676, + "n_pred": 3408, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7928293590394047, + "FN": 6608, + "FP": 742, + "IoU": 0.6567666012888764, + "TN": 623226, + "TP": 14064, + "n_pred": 14806, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8056793792306423, + "FN": 1746, + "FP": 1785, + "IoU": 0.6745922034835499, + "TN": 633789, + "TP": 7320, + "n_pred": 9105, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9416892094980462, + "FN": 1466, + "FP": 86, + "IoU": 0.8898040329451861, + "TN": 630556, + "TP": 12532, + "n_pred": 12618, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.818060610428453, + "FN": 3981, + "FP": 1068, + "IoU": 0.6921341463414634, + "TN": 628240, + "TP": 11351, + "n_pred": 12419, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8586650495950102, + "FN": 2254, + "FP": 1009, + "IoU": 0.7523339658444023, + "TN": 631465, + "TP": 9912, + "n_pred": 10921, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9239429244665532, + "FN": 504, + "FP": 658, + "IoU": 0.8586374695863747, + "TN": 636420, + "TP": 7058, + "n_pred": 7716, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8631685120234739, + "FN": 3225, + "FP": 2744, + "IoU": 0.7592756896273593, + "TN": 539684, + "TP": 18827, + "n_pred": 21571, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7524794710461769, + "FN": 941, + "FP": 1380, + "IoU": 0.6031800307744913, + "TN": 558631, + "TP": 3528, + "n_pred": 4908, + "n_ref": 4469 + }, + "3": { + "Dice": 0.95509477165755, + "FN": 389, + "FP": 317, + "IoU": 0.9140491843194546, + "TN": 556266, + "TP": 7508, + "n_pred": 7825, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6613849251510111, + "FN": 877, + "FP": 6859, + "IoU": 0.4940814858413446, + "TN": 549189, + "TP": 7555, + "n_pred": 14414, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8192700156985872, + "FN": 688, + "FP": 1154, + "IoU": 0.6938673757686554, + "TN": 558463, + "TP": 4175, + "n_pred": 5329, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8621011880923776, + "FN": 223, + "FP": 810, + "IoU": 0.7576255279211638, + "TN": 560218, + "TP": 3229, + "n_pred": 4039, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.748096040927853, + "FN": 1141, + "FP": 3192, + "IoU": 0.5975666388037522, + "TN": 408113, + "TP": 6434, + "n_pred": 9626, + "n_ref": 7575 + }, + "2": { + "Dice": 0.32740825688073394, + "FN": 1714, + "FP": 2978, + "IoU": 0.19574905725059993, + "TN": 413046, + "TP": 1142, + "n_pred": 4120, + "n_ref": 2856 + }, + "3": { + "Dice": 0.8519598315516683, + "FN": 254, + "FP": 1117, + "IoU": 0.7420993227990971, + "TN": 413564, + "TP": 3945, + "n_pred": 5062, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.671239432126336, + "FN": 529, + "FP": 3593, + "IoU": 0.5051620648259304, + "TN": 410550, + "TP": 4208, + "n_pred": 7801, + "n_ref": 4737 + }, + "2": { + "Dice": 0.36284382985119495, + "FN": 1786, + "FP": 2453, + "IoU": 0.22163055453543887, + "TN": 413434, + "TP": 1207, + "n_pred": 3660, + "n_ref": 2993 + }, + "3": { + "Dice": 0.7152200813151848, + "FN": 360, + "FP": 1251, + "IoU": 0.5566868464501926, + "TN": 415246, + "TP": 2023, + "n_pred": 3274, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9200467604236777, + "FN": 580, + "FP": 1677, + "IoU": 0.851932034376435, + "TN": 481267, + "TP": 12986, + "n_pred": 14663, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8541483535059842, + "FN": 1356, + "FP": 801, + "IoU": 0.7454266493567804, + "TN": 488037, + "TP": 6316, + "n_pred": 7117, + "n_ref": 7672 + }, + "3": { + "Dice": 0.942887328320179, + "FN": 186, + "FP": 733, + "IoU": 0.8919459141681364, + "TN": 488005, + "TP": 7586, + "n_pred": 8319, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7754004255148328, + "FN": 3604, + "FP": 1991, + "IoU": 0.6331869140496952, + "TN": 481257, + "TP": 9658, + "n_pred": 11649, + "n_ref": 13262 + }, + "2": { + "Dice": 0.7707006369426752, + "FN": 2063, + "FP": 1753, + "IoU": 0.6269430051813472, + "TN": 486281, + "TP": 6413, + "n_pred": 8166, + "n_ref": 8476 + }, + "3": { + "Dice": 0.637429111531191, + "FN": 28, + "FP": 3808, + "IoU": 0.46781354051054386, + "TN": 489302, + "TP": 3372, + "n_pred": 7180, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_003/summary_cross_val.json b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_003/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..0f0d428eb7730e3603849a33ef176f139ac36bf0 --- /dev/null +++ b/nnActive_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/loop_003/summary_cross_val.json @@ -0,0 +1,5100 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.7053985632251942, + "FN": 28.777777777777782, + "FP": 26.913580246913583, + "IoU": 0.6377987538624371, + "TN": 1131.3086419753088, + "TP": 205.5925925925926, + "n_pred": 232.50617283950615, + "n_ref": 234.37037037037035 + }, + "mean": { + "1": { + "Dice": 0.45518320504025495, + "FN": 35.81481481481482, + "FP": 16.74074074074074, + "IoU": 0.4077083023668102, + "TN": 1267.3333333333333, + "TP": 72.70370370370371, + "n_pred": 89.44444444444444, + "n_ref": 108.51851851851852 + }, + "2": { + "Dice": 0.8073723707563584, + "FN": 33.74074074074074, + "FP": 35.851851851851855, + "IoU": 0.7075755246541894, + "TN": 1120.037037037037, + "TP": 202.96296296296296, + "n_pred": 238.8148148148148, + "n_ref": 236.7037037037037 + }, + "3": { + "Dice": 0.8536401138789695, + "FN": 16.77777777777778, + "FP": 28.14814814814815, + "IoU": 0.7981124345663118, + "TN": 1006.5555555555555, + "TP": 341.1111111111111, + "n_pred": 369.25925925925924, + "n_ref": 357.8888888888889 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9212962962962963, + "FN": 11, + "FP": 23, + "IoU": 0.8540772532188842, + "TN": 1367, + "TP": 199, + "n_pred": 222, + "n_ref": 210 + }, + "2": { + "Dice": 0.8415584415584415, + "FN": 65, + "FP": 57, + "IoU": 0.726457399103139, + "TN": 1154, + "TP": 324, + "n_pred": 381, + "n_ref": 389 + }, + "3": { + "Dice": 0.9406175771971497, + "FN": 32, + "FP": 18, + "IoU": 0.8878923766816144, + "TN": 1154, + "TP": 396, + "n_pred": 414, + "n_ref": 428 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9274447949526814, + "FN": 15, + "FP": 8, + "IoU": 0.8647058823529412, + "TN": 2230, + "TP": 147, + "n_pred": 155, + "n_ref": 162 + }, + "2": { + "Dice": 0.9104938271604939, + "FN": 22, + "FP": 94, + "IoU": 0.8356940509915014, + "TN": 1694, + "TP": 590, + "n_pred": 684, + "n_ref": 612 + }, + "3": { + "Dice": 0.9819786686281721, + "FN": 37, + "FP": 12, + "IoU": 0.9645953757225434, + "TN": 1016, + "TP": 1335, + "n_pred": 1347, + "n_ref": 1372 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6262626262626263, + "FN": 140, + "FP": 8, + "IoU": 0.45588235294117646, + "TN": 2128, + "TP": 124, + "n_pred": 132, + "n_ref": 264 + }, + "3": { + "Dice": 0.9646425826287471, + "FN": 8, + "FP": 84, + "IoU": 0.9317000742390498, + "TN": 1053, + "TP": 1255, + "n_pred": 1339, + "n_ref": 1263 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8693790149892934, + "FN": 25, + "FP": 36, + "IoU": 0.7689393939393939, + "TN": 536, + "TP": 203, + "n_pred": 239, + "n_ref": 228 + }, + "3": { + "Dice": 0.9573690621193667, + "FN": 24, + "FP": 11, + "IoU": 0.9182242990654206, + "TN": 372, + "TP": 393, + "n_pred": 404, + "n_ref": 417 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.940068493150685, + "FN": 47, + "FP": 23, + "IoU": 0.8869143780290791, + "TN": 981, + "TP": 549, + "n_pred": 572, + "n_ref": 596 + }, + "2": { + "Dice": 0.8423645320197044, + "FN": 5, + "FP": 59, + "IoU": 0.7276595744680852, + "TN": 1365, + "TP": 171, + "n_pred": 230, + "n_ref": 176 + }, + "3": { + "Dice": 0.937037037037037, + "FN": 31, + "FP": 3, + "IoU": 0.8815331010452961, + "TN": 1313, + "TP": 253, + "n_pred": 256, + "n_ref": 284 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 44, + "IoU": 0.0, + "TN": 1556, + "TP": 0, + "n_pred": 44, + "n_ref": 0 + }, + "2": { + "Dice": 0.847972972972973, + "FN": 75, + "FP": 15, + "IoU": 0.7360703812316716, + "TN": 1259, + "TP": 251, + "n_pred": 266, + "n_ref": 326 + }, + "3": { + "Dice": 0.6875, + "FN": 20, + "FP": 0, + "IoU": 0.5238095238095238, + "TN": 1558, + "TP": 22, + "n_pred": 22, + "n_ref": 42 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9234338747099768, + "FN": 47, + "FP": 19, + "IoU": 0.8577586206896551, + "TN": 336, + "TP": 398, + "n_pred": 417, + "n_ref": 445 + }, + "3": { + "Dice": 0.9261261261261261, + "FN": 22, + "FP": 19, + "IoU": 0.8624161073825504, + "TN": 502, + "TP": 257, + "n_pred": 276, + "n_ref": 279 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6705882352941176, + "FN": 96, + "FP": 16, + "IoU": 0.504424778761062, + "TN": 1374, + "TP": 114, + "n_pred": 130, + "n_ref": 210 + }, + "2": { + "Dice": 0.9336016096579477, + "FN": 36, + "FP": 63, + "IoU": 0.8754716981132076, + "TN": 805, + "TP": 696, + "n_pred": 759, + "n_ref": 732 + }, + "3": { + "Dice": 0.9626411815812337, + "FN": 12, + "FP": 31, + "IoU": 0.9279731993299832, + "TN": 1003, + "TP": 554, + "n_pred": 585, + "n_ref": 566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 167, + "IoU": 0.0, + "TN": 2233, + "TP": 0, + "n_pred": 167, + "n_ref": 0 + }, + "2": { + "Dice": 0.874296435272045, + "FN": 150, + "FP": 51, + "IoU": 0.7766666666666666, + "TN": 1500, + "TP": 699, + "n_pred": 750, + "n_ref": 849 + }, + "3": { + "Dice": 0.9201277955271565, + "FN": 92, + "FP": 58, + "IoU": 0.8520710059171598, + "TN": 1386, + "TP": 864, + "n_pred": 922, + "n_ref": 956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8328445747800587, + "FN": 26, + "FP": 31, + "IoU": 0.7135678391959799, + "TN": 1401, + "TP": 142, + "n_pred": 173, + "n_ref": 168 + }, + "3": { + "Dice": 0.9733777038269551, + "FN": 31, + "FP": 1, + "IoU": 0.9481361426256077, + "TN": 983, + "TP": 585, + "n_pred": 586, + "n_ref": 616 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8551448551448552, + "FN": 130, + "FP": 15, + "IoU": 0.7469458987783595, + "TN": 1027, + "TP": 428, + "n_pred": 443, + "n_ref": 558 + }, + "3": { + "Dice": 0.984875983061101, + "FN": 15, + "FP": 10, + "IoU": 0.9702026221692491, + "TN": 761, + "TP": 814, + "n_pred": 824, + "n_ref": 829 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 1599, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8227684346701164, + "FN": 114, + "FP": 23, + "IoU": 0.6989010989010989, + "TN": 345, + "TP": 318, + "n_pred": 341, + "n_ref": 432 + }, + "2": { + "Dice": 0.8764044943820225, + "FN": 38, + "FP": 6, + "IoU": 0.78, + "TN": 600, + "TP": 156, + "n_pred": 162, + "n_ref": 194 + }, + "3": { + "Dice": 0.9767441860465116, + "FN": 6, + "FP": 2, + "IoU": 0.9545454545454546, + "TN": 624, + "TP": 168, + "n_pred": 170, + "n_ref": 174 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.88, + "FN": 0, + "FP": 3, + "IoU": 0.7857142857142857, + "TN": 786, + "TP": 11, + "n_pred": 14, + "n_ref": 11 + }, + "3": { + "Dice": 0.9987293519695044, + "FN": 2, + "FP": 0, + "IoU": 0.9974619289340102, + "TN": 12, + "TP": 786, + "n_pred": 786, + "n_ref": 788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8205128205128205, + "FN": 0, + "FP": 84, + "IoU": 0.6956521739130435, + "TN": 1324, + "TP": 192, + "n_pred": 276, + "n_ref": 192 + }, + "3": { + "Dice": 0.973384030418251, + "FN": 28, + "FP": 0, + "IoU": 0.9481481481481482, + "TN": 1060, + "TP": 512, + "n_pred": 512, + "n_ref": 540 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.19130434782608696, + "FN": 124, + "FP": 62, + "IoU": 0.10576923076923077, + "TN": 592, + "TP": 22, + "n_pred": 84, + "n_ref": 146 + }, + "2": { + "Dice": 0.8526645768025078, + "FN": 18, + "FP": 29, + "IoU": 0.7431693989071039, + "TN": 617, + "TP": 136, + "n_pred": 165, + "n_ref": 154 + }, + "3": { + "Dice": 0.4489795918367347, + "FN": 27, + "FP": 0, + "IoU": 0.2894736842105263, + "TN": 762, + "TP": 11, + "n_pred": 11, + "n_ref": 38 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 58, + "IoU": 0.0, + "TN": 2342, + "TP": 0, + "n_pred": 58, + "n_ref": 0 + }, + "2": { + "Dice": 0.9466019417475728, + "FN": 0, + "FP": 44, + "IoU": 0.8986175115207373, + "TN": 1966, + "TP": 390, + "n_pred": 434, + "n_ref": 390 + }, + "3": { + "Dice": 0.9782971619365609, + "FN": 13, + "FP": 0, + "IoU": 0.9575163398692811, + "TN": 2094, + "TP": 293, + "n_pred": 293, + "n_ref": 306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7813953488372093, + "FN": 52, + "FP": 42, + "IoU": 0.6412213740458015, + "TN": 2138, + "TP": 168, + "n_pred": 210, + "n_ref": 220 + }, + "3": { + "Dice": 0.9221183800623053, + "FN": 50, + "FP": 0, + "IoU": 0.8554913294797688, + "TN": 2054, + "TP": 296, + "n_pred": 296, + "n_ref": 346 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7627906976744186, + "FN": 31, + "FP": 71, + "IoU": 0.6165413533834586, + "TN": 534, + "TP": 164, + "n_pred": 235, + "n_ref": 195 + }, + "3": { + "Dice": 0.6311926605504588, + "FN": 3, + "FP": 198, + "IoU": 0.46112600536193027, + "TN": 427, + "TP": 172, + "n_pred": 370, + "n_ref": 175 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8697247706422019, + "FN": 51, + "FP": 20, + "IoU": 0.7694805194805194, + "TN": 492, + "TP": 237, + "n_pred": 257, + "n_ref": 288 + }, + "3": { + "Dice": 0.9070631970260223, + "FN": 0, + "FP": 50, + "IoU": 0.8299319727891157, + "TN": 506, + "TP": 244, + "n_pred": 294, + "n_ref": 244 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 560, + "FP": 13, + "IoU": 0.0, + "TN": 1027, + "TP": 0, + "n_pred": 13, + "n_ref": 560 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 221, + "IoU": 0.0, + "TN": 1379, + "TP": 0, + "n_pred": 221, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 263, + "IoU": 0.0, + "TN": 1337, + "TP": 0, + "n_pred": 263, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9887278582930756, + "FN": 0, + "FP": 14, + "IoU": 0.9777070063694268, + "TN": 972, + "TP": 614, + "n_pred": 628, + "n_ref": 614 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient089_frame10.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8452769556830119, + "FN": 13.653846153846153, + "FP": 26.14102564102564, + "IoU": 0.7744229427502286, + "TN": 1132.2051282051282, + "TP": 212.6153846153846, + "n_pred": 238.75641025641025, + "n_ref": 226.2692307692308 + }, + "mean": { + "1": { + "Dice": 0.7268597939350889, + "FN": 5.423076923076923, + "FP": 17.5, + "IoU": 0.6532375520440092, + "TN": 1256.6538461538462, + "TP": 105.03846153846153, + "n_pred": 122.53846153846153, + "n_ref": 110.46153846153847 + }, + "2": { + "Dice": 0.8800324004971023, + "FN": 24.73076923076923, + "FP": 36.15384615384615, + "IoU": 0.7918229809193608, + "TN": 1107.1153846153845, + "TP": 216.6153846153846, + "n_pred": 252.76923076923077, + "n_ref": 241.34615384615384 + }, + "3": { + "Dice": 0.9289386726168443, + "FN": 10.807692307692308, + "FP": 24.76923076923077, + "IoU": 0.8782082952873157, + "TN": 1032.8461538461538, + "TP": 316.1923076923077, + "n_pred": 340.96153846153845, + "n_ref": 327.0 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8260869565217391, + "FN": 5, + "FP": 11, + "IoU": 0.7037037037037037, + "TN": 746, + "TP": 38, + "n_pred": 49, + "n_ref": 43 + }, + "2": { + "Dice": 0.9302325581395349, + "FN": 26, + "FP": 19, + "IoU": 0.8695652173913043, + "TN": 455, + "TP": 300, + "n_pred": 319, + "n_ref": 326 + }, + "3": { + "Dice": 0.9221556886227545, + "FN": 12, + "FP": 1, + "IoU": 0.8555555555555555, + "TN": 710, + "TP": 77, + "n_pred": 78, + "n_ref": 89 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8585858585858586, + "FN": 8, + "FP": 20, + "IoU": 0.7522123893805309, + "TN": 1487, + "TP": 85, + "n_pred": 105, + "n_ref": 93 + }, + "2": { + "Dice": 0.8548387096774194, + "FN": 41, + "FP": 31, + "IoU": 0.7464788732394366, + "TN": 1316, + "TP": 212, + "n_pred": 243, + "n_ref": 253 + }, + "3": { + "Dice": 0.9247311827956989, + "FN": 0, + "FP": 35, + "IoU": 0.86, + "TN": 1350, + "TP": 215, + "n_pred": 250, + "n_ref": 215 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 1588, + "TP": 12, + "n_pred": 12, + "n_ref": 12 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 812, + "TP": 788, + "n_pred": 788, + "n_ref": 788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8137254901960784, + "FN": 0, + "FP": 76, + "IoU": 0.6859504132231405, + "TN": 1358, + "TP": 166, + "n_pred": 242, + "n_ref": 166 + }, + "3": { + "Dice": 0.8275862068965517, + "FN": 70, + "FP": 0, + "IoU": 0.7058823529411765, + "TN": 1362, + "TP": 168, + "n_pred": 168, + "n_ref": 238 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.965435041716329, + "FN": 29, + "FP": 0, + "IoU": 0.9331797235023042, + "TN": 1966, + "TP": 405, + "n_pred": 405, + "n_ref": 434 + }, + "2": { + "Dice": 0.7673469387755102, + "FN": 30, + "FP": 84, + "IoU": 0.6225165562913907, + "TN": 2098, + "TP": 188, + "n_pred": 272, + "n_ref": 218 + }, + "3": { + "Dice": 0.9478787878787879, + "FN": 13, + "FP": 30, + "IoU": 0.9009216589861752, + "TN": 1966, + "TP": 391, + "n_pred": 421, + "n_ref": 404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8930232558139535, + "FN": 40, + "FP": 6, + "IoU": 0.8067226890756303, + "TN": 562, + "TP": 192, + "n_pred": 198, + "n_ref": 232 + }, + "3": { + "Dice": 0.9727626459143969, + "FN": 0, + "FP": 21, + "IoU": 0.946969696969697, + "TN": 404, + "TP": 375, + "n_pred": 396, + "n_ref": 375 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9281437125748503, + "FN": 10, + "FP": 38, + "IoU": 0.8659217877094972, + "TN": 442, + "TP": 310, + "n_pred": 348, + "n_ref": 320 + }, + "3": { + "Dice": 0.9557109557109557, + "FN": 38, + "FP": 0, + "IoU": 0.9151785714285714, + "TN": 352, + "TP": 410, + "n_pred": 410, + "n_ref": 448 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9246753246753247, + "FN": 8, + "FP": 50, + "IoU": 0.8599033816425121, + "TN": 386, + "TP": 356, + "n_pred": 406, + "n_ref": 364 + }, + "3": { + "Dice": 0.9410071942446043, + "FN": 35, + "FP": 6, + "IoU": 0.8885869565217391, + "TN": 432, + "TP": 327, + "n_pred": 333, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9508670520231214, + "FN": 2, + "FP": 32, + "IoU": 0.90633608815427, + "TN": 2037, + "TP": 329, + "n_pred": 361, + "n_ref": 331 + }, + "2": { + "Dice": 0.8349900596421471, + "FN": 77, + "FP": 172, + "IoU": 0.7167235494880546, + "TN": 1521, + "TP": 630, + "n_pred": 802, + "n_ref": 707 + }, + "3": { + "Dice": 0.5748299319727891, + "FN": 7, + "FP": 243, + "IoU": 0.4033412887828162, + "TN": 1981, + "TP": 169, + "n_pred": 412, + "n_ref": 176 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6682750301568154, + "FN": 0, + "FP": 275, + "IoU": 0.5018115942028986, + "TN": 248, + "TP": 277, + "n_pred": 552, + "n_ref": 277 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6923076923076923, + "FN": 5, + "FP": 3, + "IoU": 0.5294117647058824, + "TN": 783, + "TP": 9, + "n_pred": 12, + "n_ref": 14 + }, + "2": { + "Dice": 0.8610567514677103, + "FN": 34, + "FP": 37, + "IoU": 0.7560137457044673, + "TN": 509, + "TP": 220, + "n_pred": 257, + "n_ref": 254 + }, + "3": { + "Dice": 0.9380530973451328, + "FN": 0, + "FP": 21, + "IoU": 0.8833333333333333, + "TN": 620, + "TP": 159, + "n_pred": 180, + "n_ref": 159 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9502762430939227, + "FN": 2, + "FP": 16, + "IoU": 0.9052631578947369, + "TN": 1410, + "TP": 172, + "n_pred": 188, + "n_ref": 174 + }, + "2": { + "Dice": 0.9499241274658573, + "FN": 21, + "FP": 12, + "IoU": 0.9046242774566474, + "TN": 1254, + "TP": 313, + "n_pred": 325, + "n_ref": 334 + }, + "3": { + "Dice": 0.9808695652173913, + "FN": 6, + "FP": 5, + "IoU": 0.962457337883959, + "TN": 1307, + "TP": 282, + "n_pred": 287, + "n_ref": 288 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 1, + "FP": 17, + "IoU": 0.0, + "TN": 2382, + "TP": 0, + "n_pred": 17, + "n_ref": 1 + }, + "2": { + "Dice": 0.8851499634235552, + "FN": 81, + "FP": 76, + "IoU": 0.7939632545931758, + "TN": 1638, + "TP": 605, + "n_pred": 681, + "n_ref": 686 + }, + "3": { + "Dice": 0.8902439024390244, + "FN": 19, + "FP": 53, + "IoU": 0.8021978021978022, + "TN": 2036, + "TP": 292, + "n_pred": 345, + "n_ref": 311 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8704156479217604, + "FN": 76, + "FP": 30, + "IoU": 0.7705627705627706, + "TN": 338, + "TP": 356, + "n_pred": 386, + "n_ref": 432 + }, + "3": { + "Dice": 0.894878706199461, + "FN": 2, + "FP": 76, + "IoU": 0.8097560975609757, + "TN": 390, + "TP": 332, + "n_pred": 408, + "n_ref": 334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 4, + "FP": 0, + "IoU": 0.0, + "TN": 1596, + "TP": 0, + "n_pred": 0, + "n_ref": 4 + }, + "2": { + "Dice": 0.7035928143712575, + "FN": 59, + "FP": 139, + "IoU": 0.5427251732101617, + "TN": 1167, + "TP": 235, + "n_pred": 374, + "n_ref": 294 + }, + "3": { + "Dice": 0.965026674570243, + "FN": 0, + "FP": 59, + "IoU": 0.9324169530355098, + "TN": 727, + "TP": 814, + "n_pred": 873, + "n_ref": 814 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9250457038391224, + "FN": 7, + "FP": 34, + "IoU": 0.8605442176870748, + "TN": 1306, + "TP": 253, + "n_pred": 287, + "n_ref": 260 + }, + "3": { + "Dice": 0.9518987341772152, + "FN": 12, + "FP": 7, + "IoU": 0.9082125603864735, + "TN": 1393, + "TP": 188, + "n_pred": 195, + "n_ref": 200 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9406474820143885, + "FN": 7, + "FP": 59, + "IoU": 0.8879456706281834, + "TN": 1011, + "TP": 523, + "n_pred": 582, + "n_ref": 530 + }, + "2": { + "Dice": 0.9409090909090909, + "FN": 17, + "FP": 9, + "IoU": 0.8884120171673819, + "TN": 1367, + "TP": 207, + "n_pred": 216, + "n_ref": 224 + }, + "3": { + "Dice": 0.9753086419753086, + "FN": 2, + "FP": 14, + "IoU": 0.9518072289156626, + "TN": 1268, + "TP": 316, + "n_pred": 330, + "n_ref": 318 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9734939759036144, + "FN": 18, + "FP": 4, + "IoU": 0.9483568075117371, + "TN": 1174, + "TP": 404, + "n_pred": 408, + "n_ref": 422 + }, + "2": { + "Dice": 0.9164420485175202, + "FN": 14, + "FP": 17, + "IoU": 0.845771144278607, + "TN": 1399, + "TP": 170, + "n_pred": 187, + "n_ref": 184 + }, + "3": { + "Dice": 0.9933367503844183, + "FN": 7, + "FP": 6, + "IoU": 0.9867617107942973, + "TN": 618, + "TP": 969, + "n_pred": 975, + "n_ref": 976 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9662676822633297, + "FN": 16, + "FP": 15, + "IoU": 0.9347368421052632, + "TN": 1925, + "TP": 444, + "n_pred": 459, + "n_ref": 460 + }, + "2": { + "Dice": 0.8728323699421965, + "FN": 5, + "FP": 39, + "IoU": 0.7743589743589744, + "TN": 2205, + "TP": 151, + "n_pred": 190, + "n_ref": 156 + }, + "3": { + "Dice": 0.9788519637462235, + "FN": 2, + "FP": 5, + "IoU": 0.9585798816568047, + "TN": 2231, + "TP": 162, + "n_pred": 167, + "n_ref": 164 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8253968253968254, + "FN": 6, + "FP": 5, + "IoU": 0.7027027027027027, + "TN": 1563, + "TP": 26, + "n_pred": 31, + "n_ref": 32 + }, + "3": { + "Dice": 0.9941291585127201, + "FN": 3, + "FP": 6, + "IoU": 0.9883268482490273, + "TN": 829, + "TP": 762, + "n_pred": 768, + "n_ref": 765 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.656934306569343, + "FN": 44, + "FP": 3, + "IoU": 0.4891304347826087, + "TN": 2308, + "TP": 45, + "n_pred": 48, + "n_ref": 89 + }, + "2": { + "Dice": 0.9029066171923315, + "FN": 91, + "FP": 66, + "IoU": 0.8229988726042841, + "TN": 1513, + "TP": 730, + "n_pred": 796, + "n_ref": 821 + }, + "3": { + "Dice": 0.9495136637332098, + "FN": 53, + "FP": 56, + "IoU": 0.9038800705467372, + "TN": 1266, + "TP": 1025, + "n_pred": 1081, + "n_ref": 1078 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8150792635899841, + "FN": 26.48148148148148, + "FP": 34.7037037037037, + "IoU": 0.7341752859441192, + "TN": 1172.6666666666667, + "TP": 218.0, + "n_pred": 252.7037037037037, + "n_ref": 244.4814814814815 + }, + "mean": { + "1": { + "Dice": 0.7655679056751401, + "FN": 30.703703703703702, + "FP": 55.77777777777778, + "IoU": 0.6834291661645014, + "TN": 1075.962962962963, + "TP": 289.4074074074074, + "n_pred": 345.18518518518516, + "n_ref": 320.1111111111111 + }, + "2": { + "Dice": 0.8334938087698078, + "FN": 33.03703703703704, + "FP": 21.48148148148148, + "IoU": 0.7358011271889768, + "TN": 1237.0740740740741, + "TP": 160.25925925925927, + "n_pred": 181.74074074074073, + "n_ref": 193.2962962962963 + }, + "3": { + "Dice": 0.8461760763250042, + "FN": 15.703703703703704, + "FP": 26.85185185185185, + "IoU": 0.7832955644788794, + "TN": 1204.962962962963, + "TP": 204.33333333333334, + "n_pred": 231.1851851851852, + "n_ref": 220.03703703703704 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7276190476190476, + "FN": 125, + "FP": 18, + "IoU": 0.5718562874251497, + "TN": 1266, + "TP": 191, + "n_pred": 209, + "n_ref": 316 + }, + "2": { + "Dice": 0.8777173913043478, + "FN": 33, + "FP": 57, + "IoU": 0.7820823244552058, + "TN": 1187, + "TP": 323, + "n_pred": 380, + "n_ref": 356 + }, + "3": { + "Dice": 0.9550706033376123, + "FN": 31, + "FP": 4, + "IoU": 0.914004914004914, + "TN": 1193, + "TP": 372, + "n_pred": 376, + "n_ref": 403 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8626373626373627, + "FN": 32, + "FP": 18, + "IoU": 0.7584541062801933, + "TN": 593, + "TP": 157, + "n_pred": 175, + "n_ref": 189 + }, + "2": { + "Dice": 0.8649789029535865, + "FN": 41, + "FP": 23, + "IoU": 0.7620817843866171, + "TN": 531, + "TP": 205, + "n_pred": 228, + "n_ref": 246 + }, + "3": { + "Dice": 0.9, + "FN": 21, + "FP": 1, + "IoU": 0.8181818181818182, + "TN": 679, + "TP": 99, + "n_pred": 100, + "n_ref": 120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8628230616302187, + "FN": 63, + "FP": 6, + "IoU": 0.7587412587412588, + "TN": 514, + "TP": 217, + "n_pred": 223, + "n_ref": 280 + }, + "3": { + "Dice": 0.9669211195928753, + "FN": 6, + "FP": 7, + "IoU": 0.9359605911330049, + "TN": 597, + "TP": 190, + "n_pred": 197, + "n_ref": 196 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7873303167420814, + "FN": 42, + "FP": 52, + "IoU": 0.6492537313432836, + "TN": 2132, + "TP": 174, + "n_pred": 226, + "n_ref": 216 + }, + "2": { + "Dice": 0.8522522522522522, + "FN": 83, + "FP": 81, + "IoU": 0.7425431711145997, + "TN": 1763, + "TP": 473, + "n_pred": 554, + "n_ref": 556 + }, + "3": { + "Dice": 0.9311678267594741, + "FN": 78, + "FP": 11, + "IoU": 0.8712011577424024, + "TN": 1709, + "TP": 602, + "n_pred": 613, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5240641711229946, + "FN": 279, + "FP": 77, + "IoU": 0.35507246376811596, + "TN": 1048, + "TP": 196, + "n_pred": 273, + "n_ref": 475 + }, + "3": { + "Dice": 0.7605633802816901, + "FN": 153, + "FP": 0, + "IoU": 0.6136363636363636, + "TN": 1204, + "TP": 243, + "n_pred": 243, + "n_ref": 396 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9591567852437418, + "FN": 28, + "FP": 3, + "IoU": 0.9215189873417722, + "TN": 2005, + "TP": 364, + "n_pred": 367, + "n_ref": 392 + }, + "2": { + "Dice": 0.9497076023391813, + "FN": 38, + "FP": 5, + "IoU": 0.9042316258351893, + "TN": 1951, + "TP": 406, + "n_pred": 411, + "n_ref": 444 + }, + "3": { + "Dice": 0.9333333333333333, + "FN": 0, + "FP": 18, + "IoU": 0.875, + "TN": 2256, + "TP": 126, + "n_pred": 144, + "n_ref": 126 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6001917545541706, + "FN": 2, + "FP": 415, + "IoU": 0.42876712328767125, + "TN": 870, + "TP": 313, + "n_pred": 728, + "n_ref": 315 + }, + "2": { + "Dice": 0.6463414634146342, + "FN": 32, + "FP": 26, + "IoU": 0.4774774774774775, + "TN": 1489, + "TP": 53, + "n_pred": 79, + "n_ref": 85 + }, + "3": { + "Dice": 0.6727066817667045, + "FN": 4, + "FP": 285, + "IoU": 0.5068259385665529, + "TN": 1014, + "TP": 297, + "n_pred": 582, + "n_ref": 301 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9623893805309734, + "FN": 30, + "FP": 4, + "IoU": 0.9275053304904051, + "TN": 331, + "TP": 435, + "n_pred": 439, + "n_ref": 465 + }, + "2": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 796, + "TP": 4, + "n_pred": 4, + "n_ref": 4 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8824383164005806, + "FN": 35, + "FP": 46, + "IoU": 0.7896103896103897, + "TN": 1215, + "TP": 304, + "n_pred": 350, + "n_ref": 339 + }, + "2": { + "Dice": 0.8875096974398758, + "FN": 97, + "FP": 48, + "IoU": 0.797768479776848, + "TN": 883, + "TP": 572, + "n_pred": 620, + "n_ref": 669 + }, + "3": { + "Dice": 0.9144981412639405, + "FN": 36, + "FP": 33, + "IoU": 0.8424657534246576, + "TN": 1162, + "TP": 369, + "n_pred": 402, + "n_ref": 405 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7019230769230769, + "FN": 6, + "FP": 242, + "IoU": 0.5407407407407407, + "TN": 1060, + "TP": 292, + "n_pred": 534, + "n_ref": 298 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7528230865746549, + "FN": 197, + "FP": 0, + "IoU": 0.6036217303822937, + "TN": 1103, + "TP": 300, + "n_pred": 300, + "n_ref": 497 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8027210884353742, + "FN": 9, + "FP": 20, + "IoU": 0.6704545454545454, + "TN": 712, + "TP": 59, + "n_pred": 79, + "n_ref": 68 + }, + "3": { + "Dice": 0.98397212543554, + "FN": 20, + "FP": 3, + "IoU": 0.9684499314128944, + "TN": 71, + "TP": 706, + "n_pred": 709, + "n_ref": 726 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7178502879078695, + "FN": 141, + "FP": 6, + "IoU": 0.5598802395209581, + "TN": 466, + "TP": 187, + "n_pred": 193, + "n_ref": 328 + }, + "2": { + "Dice": 0.944578313253012, + "FN": 16, + "FP": 7, + "IoU": 0.8949771689497716, + "TN": 581, + "TP": 196, + "n_pred": 203, + "n_ref": 212 + }, + "3": { + "Dice": 0.970954356846473, + "FN": 7, + "FP": 0, + "IoU": 0.9435483870967742, + "TN": 676, + "TP": 117, + "n_pred": 117, + "n_ref": 124 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5416116248348745, + "FN": 11, + "FP": 336, + "IoU": 0.3713768115942029, + "TN": 1048, + "TP": 205, + "n_pred": 541, + "n_ref": 216 + }, + "2": { + "Dice": 0.7400468384074942, + "FN": 25, + "FP": 86, + "IoU": 0.587360594795539, + "TN": 1331, + "TP": 158, + "n_pred": 244, + "n_ref": 183 + }, + "3": { + "Dice": 0.554858934169279, + "FN": 0, + "FP": 284, + "IoU": 0.3839479392624729, + "TN": 1139, + "TP": 177, + "n_pred": 461, + "n_ref": 177 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9172690763052209, + "FN": 91, + "FP": 12, + "IoU": 0.8471810089020771, + "TN": 926, + "TP": 571, + "n_pred": 583, + "n_ref": 662 + }, + "2": { + "Dice": 0.46153846153846156, + "FN": 7, + "FP": 0, + "IoU": 0.3, + "TN": 1590, + "TP": 3, + "n_pred": 3, + "n_ref": 10 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 14, + "IoU": 0.0, + "TN": 786, + "TP": 0, + "n_pred": 14, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9541284403669725, + "FN": 0, + "FP": 5, + "IoU": 0.9122807017543859, + "TN": 1543, + "TP": 52, + "n_pred": 57, + "n_ref": 52 + }, + "2": { + "Dice": 0.9025069637883009, + "FN": 5, + "FP": 65, + "IoU": 0.8223350253807107, + "TN": 1206, + "TP": 324, + "n_pred": 389, + "n_ref": 329 + }, + "3": { + "Dice": 0.9745762711864406, + "FN": 30, + "FP": 0, + "IoU": 0.9504132231404959, + "TN": 995, + "TP": 575, + "n_pred": 575, + "n_ref": 605 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9780380673499268, + "FN": 32, + "FP": 13, + "IoU": 0.9570200573065902, + "TN": 553, + "TP": 1002, + "n_pred": 1015, + "n_ref": 1034 + }, + "2": { + "Dice": 0.909952606635071, + "FN": 14, + "FP": 43, + "IoU": 0.8347826086956521, + "TN": 1255, + "TP": 288, + "n_pred": 331, + "n_ref": 302 + }, + "3": { + "Dice": 0.9561586638830898, + "FN": 19, + "FP": 2, + "IoU": 0.916, + "TN": 1350, + "TP": 229, + "n_pred": 231, + "n_ref": 248 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 129, + "IoU": 0.0, + "TN": 671, + "TP": 0, + "n_pred": 129, + "n_ref": 0 + }, + "2": { + "Dice": 0.8777969018932874, + "FN": 71, + "FP": 0, + "IoU": 0.7822085889570553, + "TN": 474, + "TP": 255, + "n_pred": 255, + "n_ref": 326 + }, + "3": { + "Dice": 0.8461538461538461, + "FN": 0, + "FP": 16, + "IoU": 0.7333333333333333, + "TN": 740, + "TP": 44, + "n_pred": 60, + "n_ref": 44 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8469055374592834, + "FN": 8, + "FP": 39, + "IoU": 0.7344632768361582, + "TN": 623, + "TP": 130, + "n_pred": 169, + "n_ref": 138 + }, + "2": { + "Dice": 0.9227557411273486, + "FN": 29, + "FP": 8, + "IoU": 0.8565891472868217, + "TN": 542, + "TP": 221, + "n_pred": 229, + "n_ref": 250 + }, + "3": { + "Dice": 0.9747003994673769, + "FN": 0, + "FP": 19, + "IoU": 0.9506493506493506, + "TN": 415, + "TP": 366, + "n_pred": 385, + "n_ref": 366 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9740394600207685, + "FN": 8, + "FP": 17, + "IoU": 0.9493927125506073, + "TN": 1106, + "TP": 469, + "n_pred": 486, + "n_ref": 477 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9860176074572761, + "FN": 14, + "FP": 13, + "IoU": 0.9724208375893769, + "TN": 621, + "TP": 952, + "n_pred": 965, + "n_ref": 966 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9863201094391245, + "FN": 17, + "FP": 3, + "IoU": 0.9730094466936572, + "TN": 859, + "TP": 721, + "n_pred": 724, + "n_ref": 738 + }, + "2": { + "Dice": 0.9, + "FN": 22, + "FP": 10, + "IoU": 0.8181818181818182, + "TN": 1424, + "TP": 144, + "n_pred": 154, + "n_ref": 166 + }, + "3": { + "Dice": 0.9806949806949807, + "FN": 6, + "FP": 19, + "IoU": 0.9621212121212122, + "TN": 940, + "TP": 635, + "n_pred": 654, + "n_ref": 641 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9382366808109383, + "FN": 10, + "FP": 121, + "IoU": 0.8836589698046181, + "TN": 2074, + "TP": 995, + "n_pred": 1116, + "n_ref": 1005 + }, + "2": { + "Dice": 0.9090909090909091, + "FN": 28, + "FP": 18, + "IoU": 0.8333333333333334, + "TN": 2924, + "TP": 230, + "n_pred": 248, + "n_ref": 258 + }, + "3": { + "Dice": 0.9548387096774194, + "FN": 13, + "FP": 22, + "IoU": 0.9135802469135802, + "TN": 2795, + "TP": 370, + "n_pred": 392, + "n_ref": 383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.8268965910094016, + "FN": 34.864197530864196, + "FP": 20.88888888888889, + "IoU": 0.7489596139817122, + "TN": 1206.5185185185185, + "TP": 219.2098765432099, + "n_pred": 240.09876543209876, + "n_ref": 254.07407407407405 + }, + "mean": { + "1": { + "Dice": 0.7303030006484327, + "FN": 56.592592592592595, + "FP": 19.333333333333332, + "IoU": 0.6456951661300597, + "TN": 1201.148148148148, + "TP": 204.40740740740742, + "n_pred": 223.74074074074073, + "n_ref": 261.0 + }, + "2": { + "Dice": 0.8731028743808574, + "FN": 32.96296296296296, + "FP": 30.40740740740741, + "IoU": 0.7821256795139885, + "TN": 1160.148148148148, + "TP": 257.962962962963, + "n_pred": 288.3703703703704, + "n_ref": 290.9259259259259 + }, + "3": { + "Dice": 0.8772838979989146, + "FN": 15.037037037037036, + "FP": 12.925925925925926, + "IoU": 0.8190579963010884, + "TN": 1258.2592592592594, + "TP": 195.25925925925927, + "n_pred": 208.1851851851852, + "n_ref": 210.2962962962963 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9150849150849151, + "FN": 31, + "FP": 54, + "IoU": 0.8434622467771639, + "TN": 1857, + "TP": 458, + "n_pred": 512, + "n_ref": 489 + }, + "3": { + "Dice": 0.9660377358490566, + "FN": 13, + "FP": 5, + "IoU": 0.9343065693430657, + "TN": 2126, + "TP": 256, + "n_pred": 261, + "n_ref": 269 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9781818181818182, + "FN": 7, + "FP": 5, + "IoU": 0.9572953736654805, + "TN": 519, + "TP": 269, + "n_pred": 274, + "n_ref": 276 + }, + "3": { + "Dice": 0.9903100775193798, + "FN": 5, + "FP": 5, + "IoU": 0.980806142034549, + "TN": 279, + "TP": 511, + "n_pred": 516, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7702702702702703, + "FN": 4, + "FP": 64, + "IoU": 0.6263736263736264, + "TN": 1418, + "TP": 114, + "n_pred": 178, + "n_ref": 118 + }, + "3": { + "Dice": 0.9565217391304348, + "FN": 0, + "FP": 4, + "IoU": 0.9166666666666666, + "TN": 1552, + "TP": 44, + "n_pred": 48, + "n_ref": 44 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6956521739130435, + "FN": 548, + "FP": 40, + "IoU": 0.5333333333333333, + "TN": 1140, + "TP": 672, + "n_pred": 712, + "n_ref": 1220 + }, + "2": { + "Dice": 0.7272727272727273, + "FN": 0, + "FP": 117, + "IoU": 0.5714285714285714, + "TN": 2127, + "TP": 156, + "n_pred": 273, + "n_ref": 156 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 2354, + "TP": 46, + "n_pred": 46, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8348794063079777, + "FN": 52, + "FP": 37, + "IoU": 0.7165605095541401, + "TN": 486, + "TP": 225, + "n_pred": 262, + "n_ref": 277 + }, + "3": { + "Dice": 0.940625, + "FN": 37, + "FP": 1, + "IoU": 0.887905604719764, + "TN": 461, + "TP": 301, + "n_pred": 302, + "n_ref": 338 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9590536851683349, + "FN": 3, + "FP": 42, + "IoU": 0.9213286713286714, + "TN": 1028, + "TP": 527, + "n_pred": 569, + "n_ref": 530 + }, + "2": { + "Dice": 0.9409559512652296, + "FN": 58, + "FP": 5, + "IoU": 0.8884955752212389, + "TN": 1035, + "TP": 502, + "n_pred": 507, + "n_ref": 560 + }, + "3": { + "Dice": 0.9449838187702265, + "FN": 2, + "FP": 49, + "IoU": 0.8957055214723927, + "TN": 1111, + "TP": 438, + "n_pred": 487, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9435600578871202, + "FN": 22, + "FP": 17, + "IoU": 0.8931506849315068, + "TN": 2035, + "TP": 326, + "n_pred": 343, + "n_ref": 348 + }, + "2": { + "Dice": 0.8854961832061069, + "FN": 115, + "FP": 35, + "IoU": 0.7945205479452054, + "TN": 1670, + "TP": 580, + "n_pred": 615, + "n_ref": 695 + }, + "3": { + "Dice": 0.8970747562296858, + "FN": 15, + "FP": 80, + "IoU": 0.8133595284872298, + "TN": 1891, + "TP": 414, + "n_pred": 494, + "n_ref": 429 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8912547528517111, + "FN": 83, + "FP": 60, + "IoU": 0.803840877914952, + "TN": 1671, + "TP": 586, + "n_pred": 646, + "n_ref": 669 + }, + "3": { + "Dice": 0.9372759856630825, + "FN": 34, + "FP": 36, + "IoU": 0.8819561551433389, + "TN": 1807, + "TP": 523, + "n_pred": 559, + "n_ref": 557 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9674008810572687, + "FN": 0, + "FP": 37, + "IoU": 0.9368600682593856, + "TN": 1814, + "TP": 549, + "n_pred": 586, + "n_ref": 549 + }, + "2": { + "Dice": 0.8759124087591241, + "FN": 42, + "FP": 26, + "IoU": 0.7792207792207793, + "TN": 2092, + "TP": 240, + "n_pred": 266, + "n_ref": 282 + }, + "3": { + "Dice": 0.8976897689768977, + "FN": 0, + "FP": 31, + "IoU": 0.8143712574850299, + "TN": 2233, + "TP": 136, + "n_pred": 167, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7111111111111111, + "FN": 8, + "FP": 5, + "IoU": 0.5517241379310345, + "TN": 1571, + "TP": 16, + "n_pred": 21, + "n_ref": 24 + }, + "2": { + "Dice": 0.8904847396768402, + "FN": 36, + "FP": 86, + "IoU": 0.8025889967637541, + "TN": 982, + "TP": 496, + "n_pred": 582, + "n_ref": 532 + }, + "3": { + "Dice": 0.9133689839572192, + "FN": 67, + "FP": 14, + "IoU": 0.8405511811023622, + "TN": 1092, + "TP": 427, + "n_pred": 441, + "n_ref": 494 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8900804289544236, + "FN": 0, + "FP": 41, + "IoU": 0.8019323671497585, + "TN": 1393, + "TP": 166, + "n_pred": 207, + "n_ref": 166 + }, + "2": { + "Dice": 0.9391891891891891, + "FN": 12, + "FP": 6, + "IoU": 0.8853503184713376, + "TN": 1443, + "TP": 139, + "n_pred": 145, + "n_ref": 151 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 1598, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9687184661957619, + "FN": 28, + "FP": 3, + "IoU": 0.9393346379647749, + "TN": 289, + "TP": 480, + "n_pred": 483, + "n_ref": 508 + }, + "2": { + "Dice": 0.9309090909090909, + "FN": 8, + "FP": 30, + "IoU": 0.8707482993197279, + "TN": 506, + "TP": 256, + "n_pred": 286, + "n_ref": 264 + }, + "3": { + "Dice": 0.8214285714285714, + "FN": 2, + "FP": 8, + "IoU": 0.696969696969697, + "TN": 767, + "TP": 23, + "n_pred": 31, + "n_ref": 25 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9503784693019344, + "FN": 20, + "FP": 39, + "IoU": 0.905448717948718, + "TN": 1776, + "TP": 565, + "n_pred": 604, + "n_ref": 585 + }, + "2": { + "Dice": 0.961974649766511, + "FN": 44, + "FP": 13, + "IoU": 0.9267352185089974, + "TN": 1622, + "TP": 721, + "n_pred": 734, + "n_ref": 765 + }, + "3": { + "Dice": 0.6875, + "FN": 2, + "FP": 8, + "IoU": 0.5238095238095238, + "TN": 2379, + "TP": 11, + "n_pred": 19, + "n_ref": 13 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3333333333333333, + "FN": 4, + "FP": 4, + "IoU": 0.2, + "TN": 1590, + "TP": 2, + "n_pred": 6, + "n_ref": 6 + }, + "2": { + "Dice": 0.9103194103194103, + "FN": 141, + "FP": 5, + "IoU": 0.8354002254791432, + "TN": 713, + "TP": 741, + "n_pred": 746, + "n_ref": 882 + }, + "3": { + "Dice": 0.9194029850746268, + "FN": 0, + "FP": 27, + "IoU": 0.850828729281768, + "TN": 1419, + "TP": 154, + "n_pred": 181, + "n_ref": 154 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.930379746835443, + "FN": 7, + "FP": 15, + "IoU": 0.8698224852071006, + "TN": 1431, + "TP": 147, + "n_pred": 162, + "n_ref": 154 + }, + "2": { + "Dice": 0.8581997533908755, + "FN": 72, + "FP": 43, + "IoU": 0.7516198704103672, + "TN": 1137, + "TP": 348, + "n_pred": 391, + "n_ref": 420 + }, + "3": { + "Dice": 0.9108485499462943, + "FN": 34, + "FP": 49, + "IoU": 0.8362919132149902, + "TN": 1093, + "TP": 424, + "n_pred": 473, + "n_ref": 458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9797639123102867, + "FN": 23, + "FP": 1, + "IoU": 0.9603305785123967, + "TN": 995, + "TP": 581, + "n_pred": 582, + "n_ref": 604 + }, + "2": { + "Dice": 0.910828025477707, + "FN": 5, + "FP": 23, + "IoU": 0.8362573099415205, + "TN": 1429, + "TP": 143, + "n_pred": 166, + "n_ref": 148 + }, + "3": { + "Dice": 0.96, + "FN": 0, + "FP": 4, + "IoU": 0.9230769230769231, + "TN": 1548, + "TP": 48, + "n_pred": 52, + "n_ref": 48 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 55, + "IoU": 0.0, + "TN": 1545, + "TP": 0, + "n_pred": 55, + "n_ref": 0 + }, + "2": { + "Dice": 0.7619047619047619, + "FN": 40, + "FP": 35, + "IoU": 0.6153846153846154, + "TN": 1405, + "TP": 120, + "n_pred": 155, + "n_ref": 160 + }, + "3": { + "Dice": 0.9153225806451613, + "FN": 84, + "FP": 0, + "IoU": 0.8438661710037175, + "TN": 1062, + "TP": 454, + "n_pred": 454, + "n_ref": 538 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 167, + "IoU": 0.0, + "TN": 633, + "TP": 0, + "n_pred": 167, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9900166389351082, + "FN": 5, + "FP": 7, + "IoU": 0.9802306425041186, + "TN": 193, + "TP": 595, + "n_pred": 602, + "n_ref": 600 + }, + "2": { + "Dice": 0.9789473684210527, + "FN": 4, + "FP": 4, + "IoU": 0.9587628865979382, + "TN": 606, + "TP": 186, + "n_pred": 190, + "n_ref": 190 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7428571428571429, + "FN": 31, + "FP": 5, + "IoU": 0.5909090909090909, + "TN": 1512, + "TP": 52, + "n_pred": 57, + "n_ref": 83 + }, + "2": { + "Dice": 0.9112709832134293, + "FN": 18, + "FP": 19, + "IoU": 0.8370044052863436, + "TN": 1373, + "TP": 190, + "n_pred": 209, + "n_ref": 208 + }, + "3": { + "Dice": 0.9696969696969697, + "FN": 13, + "FP": 2, + "IoU": 0.9411764705882353, + "TN": 1345, + "TP": 240, + "n_pred": 242, + "n_ref": 253 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6151111111111112, + "FN": 427, + "FP": 6, + "IoU": 0.4441591784338896, + "TN": 21, + "TP": 346, + "n_pred": 352, + "n_ref": 773 + }, + "2": { + "Dice": 0.875, + "FN": 6, + "FP": 0, + "IoU": 0.7777777777777778, + "TN": 773, + "TP": 21, + "n_pred": 21, + "n_ref": 27 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6762468300929839, + "FN": 380, + "FP": 3, + "IoU": 0.5108556832694764, + "TN": 817, + "TP": 400, + "n_pred": 403, + "n_ref": 780 + }, + "2": { + "Dice": 0.7756653992395437, + "FN": 48, + "FP": 11, + "IoU": 0.6335403726708074, + "TN": 1439, + "TP": 102, + "n_pred": 113, + "n_ref": 150 + }, + "3": { + "Dice": 0.9571428571428572, + "FN": 12, + "FP": 0, + "IoU": 0.9178082191780822, + "TN": 1454, + "TP": 134, + "n_pred": 134, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.75, + "FN": 8, + "FP": 0, + "IoU": 0.6, + "TN": 780, + "TP": 12, + "n_pred": 12, + "n_ref": 20 + }, + "2": { + "Dice": 0.7536945812807881, + "FN": 0, + "FP": 100, + "IoU": 0.6047430830039525, + "TN": 547, + "TP": 153, + "n_pred": 253, + "n_ref": 153 + }, + "3": { + "Dice": 0.9361296472831268, + "FN": 67, + "FP": 0, + "IoU": 0.8799283154121864, + "TN": 242, + "TP": 491, + "n_pred": 491, + "n_ref": 558 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.772093023255814, + "FN": 14, + "FP": 35, + "IoU": 0.6287878787878788, + "TN": 1468, + "TP": 83, + "n_pred": 118, + "n_ref": 97 + }, + "2": { + "Dice": 0.8036697247706422, + "FN": 64, + "FP": 43, + "IoU": 0.6717791411042945, + "TN": 1274, + "TP": 219, + "n_pred": 262, + "n_ref": 283 + }, + "3": { + "Dice": 0.9016018306636155, + "FN": 19, + "FP": 24, + "IoU": 0.8208333333333333, + "TN": 1360, + "TP": 197, + "n_pred": 221, + "n_ref": 216 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient095_frame12.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.6757419622967621, + "FN": 26.59259259259259, + "FP": 34.49382716049383, + "IoU": 0.5949470130156927, + "TN": 1221.3209876543208, + "TP": 169.44444444444446, + "n_pred": 203.93827160493825, + "n_ref": 196.03703703703704 + }, + "mean": { + "1": { + "Dice": 0.5442531480940503, + "FN": 33.96296296296296, + "FP": 53.407407407407405, + "IoU": 0.46829356934100624, + "TN": 1186.7037037037037, + "TP": 177.77777777777777, + "n_pred": 231.1851851851852, + "n_ref": 211.74074074074073 + }, + "2": { + "Dice": 0.7537526376563634, + "FN": 28.925925925925927, + "FP": 29.185185185185187, + "IoU": 0.6611688306862317, + "TN": 1233.3333333333333, + "TP": 160.40740740740742, + "n_pred": 189.59259259259258, + "n_ref": 189.33333333333334 + }, + "3": { + "Dice": 0.7292201011398722, + "FN": 16.88888888888889, + "FP": 20.88888888888889, + "IoU": 0.6553786390198401, + "TN": 1243.9259259259259, + "TP": 170.14814814814815, + "n_pred": 191.03703703703704, + "n_ref": 187.03703703703704 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8267581475128645, + "FN": 2, + "FP": 99, + "IoU": 0.7046783625730995, + "TN": 2058, + "TP": 241, + "n_pred": 340, + "n_ref": 243 + }, + "2": { + "Dice": 0.961340206185567, + "FN": 27, + "FP": 3, + "IoU": 0.9255583126550868, + "TN": 1997, + "TP": 373, + "n_pred": 376, + "n_ref": 400 + }, + "3": { + "Dice": 0.7855153203342619, + "FN": 2, + "FP": 75, + "IoU": 0.6467889908256881, + "TN": 2182, + "TP": 141, + "n_pred": 216, + "n_ref": 143 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.687292817679558, + "FN": 269, + "FP": 14, + "IoU": 0.5235690235690236, + "TN": 1006, + "TP": 311, + "n_pred": 325, + "n_ref": 580 + }, + "2": { + "Dice": 0.7218045112781954, + "FN": 32, + "FP": 42, + "IoU": 0.5647058823529412, + "TN": 1430, + "TP": 96, + "n_pred": 138, + "n_ref": 128 + }, + "3": { + "Dice": 0.7482993197278912, + "FN": 37, + "FP": 0, + "IoU": 0.5978260869565217, + "TN": 1508, + "TP": 55, + "n_pred": 55, + "n_ref": 92 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8796296296296297, + "FN": 53, + "FP": 77, + "IoU": 0.7851239669421488, + "TN": 995, + "TP": 475, + "n_pred": 552, + "n_ref": 528 + }, + "3": { + "Dice": 0.9139784946236559, + "FN": 29, + "FP": 51, + "IoU": 0.8415841584158416, + "TN": 1095, + "TP": 425, + "n_pred": 476, + "n_ref": 454 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 185, + "IoU": 0.0, + "TN": 615, + "TP": 0, + "n_pred": 185, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 795, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6134969325153374, + "FN": 40, + "FP": 23, + "IoU": 0.4424778761061947, + "TN": 1487, + "TP": 50, + "n_pred": 73, + "n_ref": 90 + }, + "2": { + "Dice": 0.7769423558897243, + "FN": 80, + "FP": 98, + "IoU": 0.6352459016393442, + "TN": 1112, + "TP": 310, + "n_pred": 408, + "n_ref": 390 + }, + "3": { + "Dice": 0.9171270718232044, + "FN": 13, + "FP": 152, + "IoU": 0.8469387755102041, + "TN": 522, + "TP": 913, + "n_pred": 1065, + "n_ref": 926 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.888421052631579, + "FN": 206, + "FP": 6, + "IoU": 0.7992424242424242, + "TN": 544, + "TP": 844, + "n_pred": 850, + "n_ref": 1050 + }, + "2": { + "Dice": 0.9477611940298507, + "FN": 9, + "FP": 5, + "IoU": 0.900709219858156, + "TN": 1459, + "TP": 127, + "n_pred": 132, + "n_ref": 136 + }, + "3": { + "Dice": 0.75, + "FN": 4, + "FP": 0, + "IoU": 0.6, + "TN": 1590, + "TP": 6, + "n_pred": 6, + "n_ref": 10 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8326947637292464, + "FN": 0, + "FP": 131, + "IoU": 0.7133479212253829, + "TN": 1143, + "TP": 326, + "n_pred": 457, + "n_ref": 326 + }, + "2": { + "Dice": 0.7981220657276995, + "FN": 17, + "FP": 26, + "IoU": 0.6640625, + "TN": 1472, + "TP": 85, + "n_pred": 111, + "n_ref": 102 + }, + "3": { + "Dice": 0.9192546583850931, + "FN": 26, + "FP": 0, + "IoU": 0.8505747126436781, + "TN": 1426, + "TP": 148, + "n_pred": 148, + "n_ref": 174 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.04395604395604396, + "FN": 76, + "FP": 98, + "IoU": 0.02247191011235955, + "TN": 1422, + "TP": 4, + "n_pred": 102, + "n_ref": 80 + }, + "2": { + "Dice": 0.8501529051987767, + "FN": 14, + "FP": 133, + "IoU": 0.7393617021276596, + "TN": 1036, + "TP": 417, + "n_pred": 550, + "n_ref": 431 + }, + "3": { + "Dice": 0.9781859931113662, + "FN": 24, + "FP": 14, + "IoU": 0.9573033707865168, + "TN": 710, + "TP": 852, + "n_pred": 866, + "n_ref": 876 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8759124087591241, + "FN": 14, + "FP": 3, + "IoU": 0.7792207792207793, + "TN": 1523, + "TP": 60, + "n_pred": 63, + "n_ref": 74 + }, + "2": { + "Dice": 0.9267643142476698, + "FN": 3, + "FP": 52, + "IoU": 0.8635235732009926, + "TN": 1197, + "TP": 348, + "n_pred": 400, + "n_ref": 351 + }, + "3": { + "Dice": 0.943502824858757, + "FN": 40, + "FP": 0, + "IoU": 0.893048128342246, + "TN": 1226, + "TP": 334, + "n_pred": 334, + "n_ref": 374 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.41941747572815535, + "FN": 12, + "FP": 287, + "IoU": 0.26535626535626533, + "TN": 1193, + "TP": 108, + "n_pred": 395, + "n_ref": 120 + }, + "2": { + "Dice": 0.9193548387096774, + "FN": 28, + "FP": 22, + "IoU": 0.8507462686567164, + "TN": 1265, + "TP": 285, + "n_pred": 307, + "n_ref": 313 + }, + "3": { + "Dice": 0.9577464788732394, + "FN": 12, + "FP": 3, + "IoU": 0.918918918918919, + "TN": 1415, + "TP": 170, + "n_pred": 173, + "n_ref": 182 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7453237410071942, + "FN": 177, + "FP": 0, + "IoU": 0.5940366972477065, + "TN": 364, + "TP": 259, + "n_pred": 259, + "n_ref": 436 + }, + "3": { + "Dice": 0.6445012787723785, + "FN": 0, + "FP": 139, + "IoU": 0.47547169811320755, + "TN": 535, + "TP": 126, + "n_pred": 265, + "n_ref": 126 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.937888198757764, + "FN": 3, + "FP": 17, + "IoU": 0.8830409356725146, + "TN": 2229, + "TP": 151, + "n_pred": 168, + "n_ref": 154 + }, + "3": { + "Dice": 0.9934272300469483, + "FN": 5, + "FP": 2, + "IoU": 0.9869402985074627, + "TN": 1864, + "TP": 529, + "n_pred": 531, + "n_ref": 534 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9441816461684012, + "FN": 59, + "FP": 0, + "IoU": 0.8942652329749103, + "TN": 242, + "TP": 499, + "n_pred": 499, + "n_ref": 558 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 8, + "FP": 1, + "IoU": 0.0, + "TN": 1591, + "TP": 0, + "n_pred": 1, + "n_ref": 8 + }, + "2": { + "Dice": 0.8763040238450075, + "FN": 42, + "FP": 41, + "IoU": 0.7798408488063661, + "TN": 1223, + "TP": 294, + "n_pred": 335, + "n_ref": 336 + }, + "3": { + "Dice": 0.9082969432314411, + "FN": 0, + "FP": 42, + "IoU": 0.832, + "TN": 1350, + "TP": 208, + "n_pred": 250, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6603098927294399, + "FN": 58, + "FP": 227, + "IoU": 0.4928825622775801, + "TN": 1038, + "TP": 277, + "n_pred": 504, + "n_ref": 335 + }, + "2": { + "Dice": 0.0, + "FN": 89, + "FP": 0, + "IoU": 0.0, + "TN": 1511, + "TP": 0, + "n_pred": 0, + "n_ref": 89 + }, + "3": { + "Dice": 0.0, + "FN": 131, + "FP": 0, + "IoU": 0.0, + "TN": 1469, + "TP": 0, + "n_pred": 0, + "n_ref": 131 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 796, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 49, + "IoU": 0.0, + "TN": 751, + "TP": 0, + "n_pred": 49, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9790518191841234, + "FN": 17, + "FP": 2, + "IoU": 0.958963282937365, + "TN": 1137, + "TP": 444, + "n_pred": 446, + "n_ref": 461 + }, + "2": { + "Dice": 0.7427466150870407, + "FN": 58, + "FP": 75, + "IoU": 0.5907692307692308, + "TN": 1275, + "TP": 192, + "n_pred": 267, + "n_ref": 250 + }, + "3": { + "Dice": 0.8608534322820037, + "FN": 75, + "FP": 0, + "IoU": 0.755700325732899, + "TN": 1293, + "TP": 232, + "n_pred": 232, + "n_ref": 307 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 82, + "IoU": 0.0, + "TN": 1518, + "TP": 0, + "n_pred": 82, + "n_ref": 0 + }, + "2": { + "Dice": 0.8427184466019417, + "FN": 30, + "FP": 51, + "IoU": 0.7281879194630873, + "TN": 1302, + "TP": 217, + "n_pred": 268, + "n_ref": 247 + }, + "3": { + "Dice": 0.6783625730994152, + "FN": 50, + "FP": 5, + "IoU": 0.5132743362831859, + "TN": 1487, + "TP": 58, + "n_pred": 63, + "n_ref": 108 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 60, + "IoU": 0.0, + "TN": 740, + "TP": 0, + "n_pred": 60, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9178470254957507, + "FN": 0, + "FP": 174, + "IoU": 0.8481675392670157, + "TN": 454, + "TP": 972, + "n_pred": 1146, + "n_ref": 972 + }, + "2": { + "Dice": 0.7737556561085973, + "FN": 98, + "FP": 2, + "IoU": 0.6309963099630996, + "TN": 1329, + "TP": 171, + "n_pred": 173, + "n_ref": 269 + }, + "3": { + "Dice": 0.8918918918918919, + "FN": 2, + "FP": 6, + "IoU": 0.8048780487804879, + "TN": 1559, + "TP": 33, + "n_pred": 39, + "n_ref": 35 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9620758483033932, + "FN": 34, + "FP": 4, + "IoU": 0.926923076923077, + "TN": 1080, + "TP": 482, + "n_pred": 486, + "n_ref": 516 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 1598, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient100_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6893939393939394, + "FN": 122, + "FP": 42, + "IoU": 0.5260115606936416, + "TN": 2854, + "TP": 182, + "n_pred": 224, + "n_ref": 304 + }, + "2": { + "Dice": 0.866938775510204, + "FN": 21, + "FP": 142, + "IoU": 0.7651296829971181, + "TN": 2506, + "TP": 531, + "n_pred": 673, + "n_ref": 552 + }, + "3": { + "Dice": 0.9642384105960264, + "FN": 6, + "FP": 21, + "IoU": 0.9309462915601023, + "TN": 2809, + "TP": 364, + "n_pred": 385, + "n_ref": 370 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863910/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset346_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-60__qs-60__unc-random-label__seed-12346/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.7736786671608707, + "FN": 26.073979107312436, + "FP": 28.628205128205128, + "IoU": 0.698060721910838, + "TN": 1172.8039886039885, + "TP": 204.97245963912633, + "n_pred": 233.6006647673314, + "n_ref": 231.04643874643875 + }, + "mean": { + "1": { + "Dice": 0.6444334106785934, + "FN": 32.4994301994302, + "FP": 32.55185185185185, + "IoU": 0.5716727512092774, + "TN": 1197.560398860399, + "TP": 169.86695156695154, + "n_pred": 202.4188034188034, + "n_ref": 202.36638176638178 + }, + "2": { + "Dice": 0.8295508184120978, + "FN": 30.679487179487182, + "FP": 30.615954415954416, + "IoU": 0.7356988285925494, + "TN": 1171.5415954415953, + "TP": 199.64159544159543, + "n_pred": 230.2575498575499, + "n_ref": 230.32108262108258 + }, + "3": { + "Dice": 0.847051772391921, + "FN": 15.043019943019942, + "FP": 22.716809116809117, + "IoU": 0.786810585930687, + "TN": 1149.3099715099715, + "TP": 245.40883190883187, + "n_pred": 268.125641025641, + "n_ref": 260.4518518518518 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_000/summary.json b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_000/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..0d215b48b750df5679ccf546f364c9cc11a89535 --- /dev/null +++ b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_000/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.6640572843572596, + "FN": 2054.9, + "FP": 5262.626666666667, + "IoU": 0.5261070358666399, + "TN": 838971.9, + "TP": 8139.213333333333, + "n_pred": 13401.840000000002, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.5688718575747552, + "FN": 2580.22, + "FP": 7080.7, + "IoU": 0.41455360357881005, + "TN": 837493.88, + "TP": 7273.84, + "n_pred": 14354.54, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.662700007797666, + "FN": 2513.32, + "FP": 4814.52, + "IoU": 0.5140471745076612, + "TN": 839558.62, + "TP": 7542.18, + "n_pred": 12356.7, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.7605999876993578, + "FN": 1071.16, + "FP": 3892.66, + "IoU": 0.6497203295134483, + "TN": 839863.2, + "TP": 9601.62, + "n_pred": 13494.28, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.640553759429661, + "FN": 3719, + "FP": 4953, + "IoU": 0.47118726751631196, + "TN": 1089521, + "TP": 7727, + "n_pred": 12680, + "n_ref": 11446 + }, + "2": { + "Dice": 0.7823894227492674, + "FN": 1976, + "FP": 4410, + "IoU": 0.6425612896003582, + "TN": 1088054, + "TP": 11480, + "n_pred": 15890, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9375476479920879, + "FN": 1457, + "FP": 1574, + "IoU": 0.8824373593980296, + "TN": 1080138, + "TP": 22751, + "n_pred": 24325, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6251926579795433, + "FN": 416, + "FP": 4934, + "IoU": 0.45474928658785163, + "TN": 1096108, + "TP": 4462, + "n_pred": 9396, + "n_ref": 4878 + }, + "2": { + "Dice": 0.7948613248735747, + "FN": 3327, + "FP": 3204, + "IoU": 0.6595600500417014, + "TN": 1086736, + "TP": 12653, + "n_pred": 15857, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9309946547046657, + "FN": 1152, + "FP": 1417, + "IoU": 0.8708980350771396, + "TN": 1086021, + "TP": 17330, + "n_pred": 18747, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.603676655754218, + "FN": 2877, + "FP": 4992, + "IoU": 0.43233299668157554, + "TN": 895578, + "TP": 5993, + "n_pred": 10985, + "n_ref": 8870 + }, + "2": { + "Dice": 0.811709567028716, + "FN": 2875, + "FP": 2187, + "IoU": 0.6830902147373693, + "TN": 893467, + "TP": 10911, + "n_pred": 13098, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9387725028857725, + "FN": 2300, + "FP": 193, + "IoU": 0.8846100439713029, + "TN": 887835, + "TP": 19112, + "n_pred": 19305, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5473343730144977, + "FN": 2240, + "FP": 5597, + "IoU": 0.376779324055666, + "TN": 896865, + "TP": 4738, + "n_pred": 10335, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8095441595441596, + "FN": 2958, + "FP": 2390, + "IoU": 0.6800287184396314, + "TN": 892726, + "TP": 11366, + "n_pred": 13756, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9436020813517596, + "FN": 1769, + "FP": 247, + "IoU": 0.8932259943858906, + "TN": 890559, + "TP": 16865, + "n_pred": 17112, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7432851000878369, + "FN": 8100, + "FP": 3006, + "IoU": 0.5914508534432019, + "TN": 1398576, + "TP": 16078, + "n_pred": 19084, + "n_ref": 24178 + }, + "2": { + "Dice": 0.7700492868100662, + "FN": 3288, + "FP": 3757, + "IoU": 0.6260814181837482, + "TN": 1406919, + "TP": 11796, + "n_pred": 15553, + "n_ref": 15084 + }, + "3": { + "Dice": 0.920844327176781, + "FN": 3289, + "FP": 491, + "IoU": 0.8533007334963325, + "TN": 1399993, + "TP": 21987, + "n_pred": 22478, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7745168613987485, + "FN": 3563, + "FP": 4581, + "IoU": 0.6320093985811758, + "TN": 1403629, + "TP": 13987, + "n_pred": 18568, + "n_ref": 17550 + }, + "2": { + "Dice": 0.7717712940278088, + "FN": 2940, + "FP": 4233, + "IoU": 0.6283612248070048, + "TN": 1406459, + "TP": 12128, + "n_pred": 16361, + "n_ref": 15068 + }, + "3": { + "Dice": 0.913261345190204, + "FN": 3290, + "FP": 397, + "IoU": 0.8403688790752045, + "TN": 1402663, + "TP": 19410, + "n_pred": 19807, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6738870085915126, + "FN": 2787, + "FP": 3476, + "IoU": 0.5081671116695461, + "TN": 749314, + "TP": 6471, + "n_pred": 9947, + "n_ref": 9258 + }, + "2": { + "Dice": 0.7899176745604228, + "FN": 1638, + "FP": 2496, + "IoU": 0.6527801108684697, + "TN": 750142, + "TP": 7772, + "n_pred": 10268, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9434875534322353, + "FN": 1007, + "FP": 791, + "IoU": 0.8930207651573749, + "TN": 745241, + "TP": 15009, + "n_pred": 15800, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5692251727901055, + "FN": 1006, + "FP": 4915, + "IoU": 0.39784399471168513, + "TN": 752215, + "TP": 3912, + "n_pred": 8827, + "n_ref": 4918 + }, + "2": { + "Dice": 0.7471185195389631, + "FN": 3103, + "FP": 2404, + "IoU": 0.596320187655769, + "TN": 748406, + "TP": 8135, + "n_pred": 10539, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9026103546960368, + "FN": 1504, + "FP": 742, + "IoU": 0.8225067172435594, + "TN": 749394, + "TP": 10408, + "n_pred": 11150, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4520098157812878, + "FN": 7305, + "FP": 8550, + "IoU": 0.2919978565687238, + "TN": 1055878, + "TP": 6539, + "n_pred": 15089, + "n_ref": 13844 + }, + "2": { + "Dice": 0.5187338501291989, + "FN": 4249, + "FP": 6181, + "IoU": 0.3501962494548626, + "TN": 1062221, + "TP": 5621, + "n_pred": 11802, + "n_ref": 9870 + }, + "3": { + "Dice": 0.5951459162149895, + "FN": 7259, + "FP": 7904, + "IoU": 0.4236353960772389, + "TN": 1051964, + "TP": 11145, + "n_pred": 19049, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5133041669655024, + "FN": 6139, + "FP": 7433, + "IoU": 0.34526508755849294, + "TN": 1057543, + "TP": 7157, + "n_pred": 14590, + "n_ref": 13296 + }, + "2": { + "Dice": 0.6037460888946038, + "FN": 3757, + "FP": 5488, + "IoU": 0.4324042239685658, + "TN": 1061984, + "TP": 7043, + "n_pred": 12531, + "n_ref": 10800 + }, + "3": { + "Dice": 0.5910282378172287, + "FN": 5305, + "FP": 8425, + "IoU": 0.41947486364212927, + "TN": 1054621, + "TP": 9921, + "n_pred": 18346, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5321678942230899, + "FN": 3135, + "FP": 7409, + "IoU": 0.3625536545553473, + "TN": 1089379, + "TP": 5997, + "n_pred": 13406, + "n_ref": 9132 + }, + "2": { + "Dice": 0.7335799817002825, + "FN": 2262, + "FP": 4435, + "IoU": 0.5792548847144562, + "TN": 1090003, + "TP": 9220, + "n_pred": 13655, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8932830857902904, + "FN": 1422, + "FP": 985, + "IoU": 0.8071468632321128, + "TN": 1093439, + "TP": 10074, + "n_pred": 11059, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.24618076586580523, + "FN": 1223, + "FP": 9978, + "IoU": 0.14036838066001536, + "TN": 1092890, + "TP": 1829, + "n_pred": 11807, + "n_ref": 3052 + }, + "2": { + "Dice": 0.6641544983513895, + "FN": 3187, + "FP": 6082, + "IoU": 0.49717912552891397, + "TN": 1087486, + "TP": 9165, + "n_pred": 15247, + "n_ref": 12352 + }, + "3": { + "Dice": 0.6424674312437367, + "FN": 395, + "FP": 2816, + "IoU": 0.473261154855643, + "TN": 1099824, + "TP": 2885, + "n_pred": 5701, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5609170887763263, + "FN": 3904, + "FP": 4331, + "IoU": 0.3897739903668025, + "TN": 1133385, + "TP": 5260, + "n_pred": 9591, + "n_ref": 9164 + }, + "2": { + "Dice": 0.7063432200296844, + "FN": 4901, + "FP": 7168, + "IoU": 0.5460051158591634, + "TN": 1120296, + "TP": 14515, + "n_pred": 21683, + "n_ref": 19416 + }, + "3": { + "Dice": 0.7148597208515438, + "FN": 1789, + "FP": 6301, + "IoU": 0.5562503428226647, + "TN": 1128649, + "TP": 10141, + "n_pred": 16442, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.13778537664688725, + "FN": 1781, + "FP": 6792, + "IoU": 0.0739900626485202, + "TN": 1137622, + "TP": 685, + "n_pred": 7477, + "n_ref": 2466 + }, + "2": { + "Dice": 0.1780757908508948, + "FN": 20625, + "FP": 14555, + "IoU": 0.09774050421892232, + "TN": 1107889, + "TP": 3811, + "n_pred": 18366, + "n_ref": 24436 + }, + "3": { + "Dice": 0.10435214708683589, + "FN": 1456, + "FP": 20173, + "IoU": 0.05504827646467736, + "TN": 1123991, + "TP": 1260, + "n_pred": 21433, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7621563672562983, + "FN": 1893, + "FP": 4319, + "IoU": 0.6157129600989792, + "TN": 784635, + "TP": 9953, + "n_pred": 14272, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8170468732266485, + "FN": 1435, + "FP": 1789, + "IoU": 0.6906840640890338, + "TN": 790377, + "TP": 7199, + "n_pred": 8988, + "n_ref": 8634 + }, + "3": { + "Dice": 0.8750348830719429, + "FN": 814, + "FP": 1425, + "IoU": 0.77783290335384, + "TN": 790722, + "TP": 7839, + "n_pred": 9264, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3485215432272599, + "FN": 845, + "FP": 10722, + "IoU": 0.2110360821226383, + "TN": 786139, + "TP": 3094, + "n_pred": 13816, + "n_ref": 3939 + }, + "2": { + "Dice": 0.7247294182002891, + "FN": 3378, + "FP": 3667, + "IoU": 0.5682946258961946, + "TN": 784481, + "TP": 9274, + "n_pred": 12941, + "n_ref": 12652 + }, + "3": { + "Dice": 0.4744723706103862, + "FN": 137, + "FP": 5864, + "IoU": 0.3110218140068886, + "TN": 792090, + "TP": 2709, + "n_pred": 8573, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.708448972422273, + "FN": 4109, + "FP": 4190, + "IoU": 0.5485257316940485, + "TN": 1329458, + "TP": 10083, + "n_pred": 14273, + "n_ref": 14192 + }, + "2": { + "Dice": 0.7821441506700471, + "FN": 1968, + "FP": 2844, + "IoU": 0.6422304832713754, + "TN": 1334390, + "TP": 8638, + "n_pred": 11482, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9628527240363011, + "FN": 830, + "FP": 443, + "IoU": 0.9283664397051375, + "TN": 1330069, + "TP": 16498, + "n_pred": 16941, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5073232859265548, + "FN": 1088, + "FP": 8196, + "IoU": 0.3398748577929465, + "TN": 1333776, + "TP": 4780, + "n_pred": 12976, + "n_ref": 5868 + }, + "2": { + "Dice": 0.7566493674991891, + "FN": 2783, + "FP": 3219, + "IoU": 0.6085567077545164, + "TN": 1332507, + "TP": 9331, + "n_pred": 12550, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9327338899593235, + "FN": 726, + "FP": 845, + "IoU": 0.8739468827730081, + "TN": 1335377, + "TP": 10892, + "n_pred": 11737, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7251727115716753, + "FN": 2385, + "FP": 5253, + "IoU": 0.568839966130398, + "TN": 834253, + "TP": 10077, + "n_pred": 15330, + "n_ref": 12462 + }, + "2": { + "Dice": 0.7478560775540641, + "FN": 1425, + "FP": 3985, + "IoU": 0.597260477927492, + "TN": 838535, + "TP": 8023, + "n_pred": 12008, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9546201907267347, + "FN": 1070, + "FP": 586, + "IoU": 0.9131802453601762, + "TN": 832894, + "TP": 17418, + "n_pred": 18004, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5760901233368942, + "FN": 1006, + "FP": 7724, + "IoU": 0.40458327649706727, + "TN": 837306, + "TP": 5932, + "n_pred": 13656, + "n_ref": 6938 + }, + "2": { + "Dice": 0.7885250063467886, + "FN": 1974, + "FP": 3024, + "IoU": 0.6508801341156748, + "TN": 837652, + "TP": 9318, + "n_pred": 12342, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9330918060587374, + "FN": 891, + "FP": 845, + "IoU": 0.8745755364496784, + "TN": 838127, + "TP": 12105, + "n_pred": 12950, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5192296570470187, + "FN": 1367, + "FP": 6946, + "IoU": 0.35064833619746916, + "TN": 839166, + "TP": 4489, + "n_pred": 11435, + "n_ref": 5856 + }, + "2": { + "Dice": 0.7191592005513439, + "FN": 2372, + "FP": 4148, + "IoU": 0.5614743072370191, + "TN": 837100, + "TP": 8348, + "n_pred": 12496, + "n_ref": 10720 + }, + "3": { + "Dice": 0.7945922713241902, + "FN": 2788, + "FP": 2469, + "IoU": 0.6591896272285251, + "TN": 836543, + "TP": 10168, + "n_pred": 12637, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.24749530369442704, + "FN": 523, + "FP": 9091, + "IoU": 0.141223760607414, + "TN": 840773, + "TP": 1581, + "n_pred": 10672, + "n_ref": 2104 + }, + "2": { + "Dice": 0.7749579634771048, + "FN": 2677, + "FP": 3078, + "IoU": 0.632597037793667, + "TN": 836304, + "TP": 9909, + "n_pred": 12987, + "n_ref": 12586 + }, + "3": { + "Dice": 0.7692072549419197, + "FN": 1197, + "FP": 3333, + "IoU": 0.6249689543836411, + "TN": 839889, + "TP": 7549, + "n_pred": 10882, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4977154046997389, + "FN": 5463, + "FP": 9927, + "IoU": 0.3313056702150771, + "TN": 774025, + "TP": 7625, + "n_pred": 17552, + "n_ref": 13088 + }, + "2": { + "Dice": 0.6650972364380757, + "FN": 2356, + "FP": 4188, + "IoU": 0.4982364667995706, + "TN": 783998, + "TP": 6498, + "n_pred": 10686, + "n_ref": 8854 + }, + "3": { + "Dice": 0.7760703261307207, + "FN": 1893, + "FP": 4781, + "IoU": 0.6340808158342014, + "TN": 778801, + "TP": 11565, + "n_pred": 16346, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.37777862799862266, + "FN": 2731, + "FP": 13532, + "IoU": 0.23287735849056604, + "TN": 775840, + "TP": 4937, + "n_pred": 18469, + "n_ref": 7668 + }, + "2": { + "Dice": 0.7285200605601817, + "FN": 1923, + "FP": 3815, + "IoU": 0.5729701570290987, + "TN": 783603, + "TP": 7699, + "n_pred": 11514, + "n_ref": 9622 + }, + "3": { + "Dice": 0.6761855758511277, + "FN": 1147, + "FP": 6405, + "IoU": 0.5107857744380385, + "TN": 781603, + "TP": 7885, + "n_pred": 14290, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6360805618126408, + "FN": 2867, + "FP": 8119, + "IoU": 0.4663622674503327, + "TN": 876083, + "TP": 9601, + "n_pred": 17720, + "n_ref": 12468 + }, + "2": { + "Dice": 0.6349348497738773, + "FN": 3248, + "FP": 4905, + "IoU": 0.46513153578691857, + "TN": 881427, + "TP": 7090, + "n_pred": 11995, + "n_ref": 10338 + }, + "3": { + "Dice": 0.8702152895086799, + "FN": 146, + "FP": 3465, + "IoU": 0.7702487752115543, + "TN": 880953, + "TP": 12106, + "n_pred": 15571, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.507252499647937, + "FN": 953, + "FP": 9544, + "IoU": 0.339811320754717, + "TN": 880770, + "TP": 5403, + "n_pred": 14947, + "n_ref": 6356 + }, + "2": { + "Dice": 0.7277791040025463, + "FN": 2372, + "FP": 4470, + "IoU": 0.5720540405303978, + "TN": 880682, + "TP": 9146, + "n_pred": 13616, + "n_ref": 11518 + }, + "3": { + "Dice": 0.8410715153872332, + "FN": 176, + "FP": 3093, + "IoU": 0.7257320244986996, + "TN": 884751, + "TP": 8650, + "n_pred": 11743, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6437704079625477, + "FN": 3038, + "FP": 6017, + "IoU": 0.4746765678482335, + "TN": 744811, + "TP": 8182, + "n_pred": 14199, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8155706387378073, + "FN": 1340, + "FP": 2763, + "IoU": 0.6885768500948767, + "TN": 748873, + "TP": 9072, + "n_pred": 11835, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9134834104635657, + "FN": 106, + "FP": 2100, + "IoU": 0.8407450187698527, + "TN": 748196, + "TP": 11646, + "n_pred": 13746, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42070923699631485, + "FN": 310, + "FP": 9279, + "IoU": 0.26639124780047435, + "TN": 748977, + "TP": 3482, + "n_pred": 12761, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8001991783891448, + "FN": 1990, + "FP": 2825, + "IoU": 0.6669433492425815, + "TN": 747591, + "TP": 9642, + "n_pred": 12467, + "n_ref": 11632 + }, + "3": { + "Dice": 0.852204539525176, + "FN": 301, + "FP": 1965, + "IoU": 0.7424707353108307, + "TN": 753249, + "TP": 6533, + "n_pred": 8498, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6880266603189716, + "FN": 716, + "FP": 5837, + "IoU": 0.5244212206981639, + "TN": 981549, + "TP": 7226, + "n_pred": 13063, + "n_ref": 7942 + }, + "2": { + "Dice": 0.5956754049089998, + "FN": 1613, + "FP": 8073, + "IoU": 0.42417216574519945, + "TN": 978507, + "TP": 7135, + "n_pred": 15208, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9345454545454546, + "FN": 98, + "FP": 2206, + "IoU": 0.8771331058020477, + "TN": 976576, + "TP": 16448, + "n_pred": 18654, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4862181133367574, + "FN": 402, + "FP": 5600, + "IoU": 0.32119429993214205, + "TN": 986486, + "TP": 2840, + "n_pred": 8440, + "n_ref": 3242 + }, + "2": { + "Dice": 0.6139809590973202, + "FN": 1369, + "FP": 7389, + "IoU": 0.44298161928385166, + "TN": 979605, + "TP": 6965, + "n_pred": 14354, + "n_ref": 8334 + }, + "3": { + "Dice": 0.77269538893196, + "FN": 149, + "FP": 6008, + "IoU": 0.62958729394778, + "TN": 978706, + "TP": 10465, + "n_pred": 16473, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7996804763806689, + "FN": 3312, + "FP": 2205, + "IoU": 0.666223001996491, + "TN": 741487, + "TP": 11012, + "n_pred": 13217, + "n_ref": 14324 + }, + "2": { + "Dice": 0.7816531294792164, + "FN": 1450, + "FP": 2663, + "IoU": 0.6415686274509804, + "TN": 746541, + "TP": 7362, + "n_pred": 10025, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9391816861706671, + "FN": 307, + "FP": 1117, + "IoU": 0.8853369836540784, + "TN": 745597, + "TP": 10995, + "n_pred": 12112, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.47896917749900664, + "FN": 1017, + "FP": 8162, + "IoU": 0.3148977459322287, + "TN": 744618, + "TP": 4219, + "n_pred": 12381, + "n_ref": 5236 + }, + "2": { + "Dice": 0.7562702862201239, + "FN": 1643, + "FP": 3313, + "IoU": 0.6080664294187426, + "TN": 745371, + "TP": 7689, + "n_pred": 11002, + "n_ref": 9332 + }, + "3": { + "Dice": 0.5416232005007302, + "FN": 298, + "FP": 6293, + "IoU": 0.3713876967095851, + "TN": 747531, + "TP": 3894, + "n_pred": 10187, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5579868708971554, + "FN": 1316, + "FP": 9188, + "IoU": 0.38694992412746587, + "TN": 621842, + "TP": 6630, + "n_pred": 15818, + "n_ref": 7946 + }, + "2": { + "Dice": 0.5411552346570397, + "FN": 869, + "FP": 6757, + "IoU": 0.37094778520168276, + "TN": 626853, + "TP": 4497, + "n_pred": 11254, + "n_ref": 5366 + }, + "3": { + "Dice": 0.529850121410031, + "FN": 1006, + "FP": 10224, + "IoU": 0.36040551315639596, + "TN": 621418, + "TP": 6328, + "n_pred": 16552, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.27759269210102094, + "FN": 437, + "FP": 13007, + "IoU": 0.16116553316278778, + "TN": 622949, + "TP": 2583, + "n_pred": 15590, + "n_ref": 3020 + }, + "2": { + "Dice": 0.6809325744308231, + "FN": 1131, + "FP": 4699, + "IoU": 0.5162227201062153, + "TN": 626925, + "TP": 6221, + "n_pred": 10920, + "n_ref": 7352 + }, + "3": { + "Dice": 0.2900280043832948, + "FN": 374, + "FP": 11288, + "IoU": 0.1696097977784107, + "TN": 624932, + "TP": 2382, + "n_pred": 13670, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6083652865233756, + "FN": 6793, + "FP": 4340, + "IoU": 0.4371587462082912, + "TN": 963260, + "TP": 8647, + "n_pred": 12987, + "n_ref": 15440 + }, + "2": { + "Dice": 0.6337438996049268, + "FN": 1715, + "FP": 7741, + "IoU": 0.4638543970062936, + "TN": 965403, + "TP": 8181, + "n_pred": 15922, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9392057761732852, + "FN": 210, + "FP": 1474, + "IoU": 0.8853797985298122, + "TN": 968348, + "TP": 13008, + "n_pred": 14482, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5862390670553936, + "FN": 1161, + "FP": 5935, + "IoU": 0.4146663367153345, + "TN": 970917, + "TP": 5027, + "n_pred": 10962, + "n_ref": 6188 + }, + "2": { + "Dice": 0.5775195320168034, + "FN": 2601, + "FP": 8160, + "IoU": 0.4059947008169574, + "TN": 964924, + "TP": 7355, + "n_pred": 15515, + "n_ref": 9956 + }, + "3": { + "Dice": 0.5516944284893739, + "FN": 227, + "FP": 9139, + "IoU": 0.38092405314297045, + "TN": 967911, + "TP": 5763, + "n_pred": 14902, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7071588773716433, + "FN": 4514, + "FP": 5148, + "IoU": 0.546980495123781, + "TN": 1027248, + "TP": 11666, + "n_pred": 16814, + "n_ref": 16180 + }, + "2": { + "Dice": 0.5590981288498044, + "FN": 1492, + "FP": 9889, + "IoU": 0.3880195730494166, + "TN": 1029979, + "TP": 7216, + "n_pred": 17105, + "n_ref": 8708 + }, + "3": { + "Dice": 0.7504926339495167, + "FN": 263, + "FP": 7714, + "IoU": 0.6006308200660859, + "TN": 1028602, + "TP": 11997, + "n_pred": 19711, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.46046718356462046, + "FN": 768, + "FP": 10157, + "IoU": 0.2990954000128312, + "TN": 1032989, + "TP": 4662, + "n_pred": 14819, + "n_ref": 5430 + }, + "2": { + "Dice": 0.5388755980861244, + "FN": 2213, + "FP": 11665, + "IoU": 0.3688088415882112, + "TN": 1026589, + "TP": 8109, + "n_pred": 19774, + "n_ref": 10322 + }, + "3": { + "Dice": 0.3538628944504897, + "FN": 202, + "FP": 17612, + "IoU": 0.21496562665256477, + "TN": 1025884, + "TP": 4878, + "n_pred": 22490, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42564202082929037, + "FN": 4582, + "FP": 13176, + "IoU": 0.27035910921193196, + "TN": 464878, + "TP": 6580, + "n_pred": 19756, + "n_ref": 11162 + }, + "2": { + "Dice": 0.3450171821305842, + "FN": 709, + "FP": 6915, + "IoU": 0.2084717607973422, + "TN": 479584, + "TP": 2008, + "n_pred": 8923, + "n_ref": 2717 + }, + "3": { + "Dice": 0.6495978750092231, + "FN": 249, + "FP": 4500, + "IoU": 0.4810403234619167, + "TN": 480065, + "TP": 4402, + "n_pred": 8902, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4516054693501306, + "FN": 772, + "FP": 13506, + "IoU": 0.29166046534702583, + "TN": 469059, + "TP": 5879, + "n_pred": 19385, + "n_ref": 6651 + }, + "2": { + "Dice": 0.5165858389912706, + "FN": 697, + "FP": 4287, + "IoU": 0.34824114031646397, + "TN": 481569, + "TP": 2663, + "n_pred": 6950, + "n_ref": 3360 + }, + "3": { + "Dice": 0.7326226012793177, + "FN": 72, + "FP": 1182, + "IoU": 0.5780619111709286, + "TN": 486244, + "TP": 1718, + "n_pred": 2900, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8526280467343889, + "FN": 1901, + "FP": 2930, + "IoU": 0.7431138998192066, + "TN": 461674, + "TP": 13975, + "n_pred": 16905, + "n_ref": 15876 + }, + "2": { + "Dice": 0.6396495071193866, + "FN": 723, + "FP": 3554, + "IoU": 0.47020933977455714, + "TN": 472407, + "TP": 3796, + "n_pred": 7350, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9162067235323633, + "FN": 569, + "FP": 600, + "IoU": 0.8453703703703703, + "TN": 472920, + "TP": 6391, + "n_pred": 6991, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7786596780232122, + "FN": 1212, + "FP": 4700, + "IoU": 0.63754521488566, + "TN": 464169, + "TP": 10399, + "n_pred": 15099, + "n_ref": 11611 + }, + "2": { + "Dice": 0.6522861917059092, + "FN": 1368, + "FP": 3210, + "IoU": 0.4839945897204689, + "TN": 471608, + "TP": 4294, + "n_pred": 7504, + "n_ref": 5662 + }, + "3": { + "Dice": 0.6974900924702774, + "FN": 166, + "FP": 2124, + "IoU": 0.5354969574036511, + "TN": 475550, + "TP": 2640, + "n_pred": 4764, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6975513905683193, + "FN": 6827, + "FP": 5179, + "IoU": 0.5355692236277126, + "TN": 618789, + "TP": 13845, + "n_pred": 19024, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7945724526369687, + "FN": 1307, + "FP": 2705, + "IoU": 0.6591623481437431, + "TN": 632869, + "TP": 7759, + "n_pred": 10464, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9323620442364309, + "FN": 1647, + "FP": 145, + "IoU": 0.8732942091494025, + "TN": 630497, + "TP": 12351, + "n_pred": 12496, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7230259192284508, + "FN": 3337, + "FP": 5853, + "IoU": 0.5662025017701203, + "TN": 623455, + "TP": 11995, + "n_pred": 17848, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8281706851985253, + "FN": 2394, + "FP": 1661, + "IoU": 0.7067332031532508, + "TN": 630813, + "TP": 9772, + "n_pred": 11433, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9112098383877406, + "FN": 486, + "FP": 893, + "IoU": 0.8369012418687167, + "TN": 636185, + "TP": 7076, + "n_pred": 7969, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8047455423476969, + "FN": 4721, + "FP": 3689, + "IoU": 0.6732838662056642, + "TN": 538739, + "TP": 17331, + "n_pred": 21020, + "n_ref": 22052 + }, + "2": { + "Dice": 0.5439724094685687, + "FN": 999, + "FP": 4819, + "IoU": 0.3736003445305771, + "TN": 555192, + "TP": 3470, + "n_pred": 8289, + "n_ref": 4469 + }, + "3": { + "Dice": 0.818420318169132, + "FN": 566, + "FP": 2687, + "IoU": 0.6926492819349962, + "TN": 553896, + "TP": 7331, + "n_pred": 10018, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5614902991419958, + "FN": 1168, + "FP": 10178, + "IoU": 0.39032778076303065, + "TN": 545870, + "TP": 7264, + "n_pred": 17442, + "n_ref": 8432 + }, + "2": { + "Dice": 0.6450058297706956, + "FN": 714, + "FP": 3853, + "IoU": 0.47602111060119323, + "TN": 555764, + "TP": 4149, + "n_pred": 8002, + "n_ref": 4863 + }, + "3": { + "Dice": 0.61879415465015, + "FN": 255, + "FP": 3684, + "IoU": 0.4480100896860987, + "TN": 557344, + "TP": 3197, + "n_pred": 6881, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5155689598956635, + "FN": 1250, + "FP": 10636, + "IoU": 0.34731755532370545, + "TN": 400669, + "TP": 6325, + "n_pred": 16961, + "n_ref": 7575 + }, + "2": { + "Dice": 0.17185839260894448, + "FN": 1805, + "FP": 8324, + "IoU": 0.09400715563506261, + "TN": 407700, + "TP": 1051, + "n_pred": 9375, + "n_ref": 2856 + }, + "3": { + "Dice": 0.6601068792942574, + "FN": 308, + "FP": 3699, + "IoU": 0.49265636870093693, + "TN": 410982, + "TP": 3891, + "n_pred": 7590, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.39332336821126057, + "FN": 790, + "FP": 11386, + "IoU": 0.24480555727842213, + "TN": 402757, + "TP": 3947, + "n_pred": 15333, + "n_ref": 4737 + }, + "2": { + "Dice": 0.15171813832100914, + "FN": 2121, + "FP": 7630, + "IoU": 0.08208603972512472, + "TN": 408257, + "TP": 872, + "n_pred": 8502, + "n_ref": 2993 + }, + "3": { + "Dice": 0.44033823989978077, + "FN": 274, + "FP": 5087, + "IoU": 0.2823293172690763, + "TN": 411410, + "TP": 2109, + "n_pred": 7196, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8000406903801159, + "FN": 1769, + "FP": 4128, + "IoU": 0.666723182999887, + "TN": 478816, + "TP": 11797, + "n_pred": 15925, + "n_ref": 13566 + }, + "2": { + "Dice": 0.7368154799544707, + "FN": 1846, + "FP": 2316, + "IoU": 0.5832999599519423, + "TN": 486522, + "TP": 5826, + "n_pred": 8142, + "n_ref": 7672 + }, + "3": { + "Dice": 0.8744464254903088, + "FN": 170, + "FP": 2013, + "IoU": 0.7769034236075626, + "TN": 486725, + "TP": 7602, + "n_pred": 9615, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6908256880733945, + "FN": 3473, + "FP": 5289, + "IoU": 0.5276804484933427, + "TN": 477959, + "TP": 9789, + "n_pred": 15078, + "n_ref": 13262 + }, + "2": { + "Dice": 0.6652797301096429, + "FN": 2560, + "FP": 3393, + "IoU": 0.49844131771842615, + "TN": 484641, + "TP": 5916, + "n_pred": 9309, + "n_ref": 8476 + }, + "3": { + "Dice": 0.5771315495138949, + "FN": 46, + "FP": 4869, + "IoU": 0.40561131938565725, + "TN": 488241, + "TP": 3354, + "n_pred": 8223, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_000/summary_cross_val.json b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_000/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..636bd19b8948eb862231f667a197e088416e36b6 --- /dev/null +++ b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_000/summary_cross_val.json @@ -0,0 +1,3336 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.5427261608987716, + "FN": 37.29411764705882, + "FP": 22.666666666666668, + "IoU": 0.46915810736056707, + "TN": 695.5490196078432, + "TP": 91.54901960784314, + "n_pred": 114.21568627450979, + "n_ref": 128.84313725490196 + }, + "mean": { + "1": { + "Dice": 0.489893097390969, + "FN": 52.1764705882353, + "FP": 34.11764705882353, + "IoU": 0.3948111826887127, + "TN": 671.7647058823529, + "TP": 89.0, + "n_pred": 123.11764705882354, + "n_ref": 141.1764705882353 + }, + "2": { + "Dice": 0.5417100682877662, + "FN": 35.35294117647059, + "FP": 13.764705882352942, + "IoU": 0.4572363932359699, + "TN": 722.9411764705883, + "TP": 75.0, + "n_pred": 88.76470588235294, + "n_ref": 110.3529411764706 + }, + "3": { + "Dice": 0.5965753170175795, + "FN": 24.352941176470587, + "FP": 20.11764705882353, + "IoU": 0.5554267461570186, + "TN": 691.9411764705883, + "TP": 110.6470588235294, + "n_pred": 130.76470588235293, + "n_ref": 135.0 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9384615384615385, + "FN": 1, + "FP": 7, + "IoU": 0.8840579710144928, + "TN": 731, + "TP": 61, + "n_pred": 68, + "n_ref": 62 + }, + "2": { + "Dice": 0.9163636363636364, + "FN": 8, + "FP": 38, + "IoU": 0.8456375838926175, + "TN": 502, + "TP": 252, + "n_pred": 290, + "n_ref": 260 + }, + "3": { + "Dice": 0.9574700109051254, + "FN": 39, + "FP": 0, + "IoU": 0.9184100418410042, + "TN": 322, + "TP": 439, + "n_pred": 439, + "n_ref": 478 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6900269541778976, + "FN": 0, + "FP": 115, + "IoU": 0.5267489711934157, + "TN": 557, + "TP": 128, + "n_pred": 243, + "n_ref": 128 + }, + "2": { + "Dice": 0.7781908302354399, + "FN": 162, + "FP": 17, + "IoU": 0.6369168356997972, + "TN": 307, + "TP": 314, + "n_pred": 331, + "n_ref": 476 + }, + "3": { + "Dice": 0.8647342995169082, + "FN": 17, + "FP": 39, + "IoU": 0.7617021276595745, + "TN": 565, + "TP": 179, + "n_pred": 218, + "n_ref": 196 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7740029542097489, + "FN": 146, + "FP": 7, + "IoU": 0.6313253012048192, + "TN": 385, + "TP": 262, + "n_pred": 269, + "n_ref": 408 + }, + "2": { + "Dice": 0.25, + "FN": 14, + "FP": 4, + "IoU": 0.14285714285714285, + "TN": 779, + "TP": 3, + "n_pred": 7, + "n_ref": 17 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 176, + "IoU": 0.0, + "TN": 624, + "TP": 0, + "n_pred": 176, + "n_ref": 0 + }, + "2": { + "Dice": 0.6273830155979203, + "FN": 198, + "FP": 17, + "IoU": 0.45707070707070707, + "TN": 404, + "TP": 181, + "n_pred": 198, + "n_ref": 379 + }, + "3": { + "Dice": 0.9439809296781884, + "FN": 17, + "FP": 30, + "IoU": 0.8939051918735892, + "TN": 357, + "TP": 396, + "n_pred": 426, + "n_ref": 413 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 78, + "IoU": 0.0, + "TN": 722, + "TP": 0, + "n_pred": 78, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 796, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8833819241982507, + "FN": 160, + "FP": 0, + "IoU": 0.7911227154046997, + "TN": 34, + "TP": 606, + "n_pred": 606, + "n_ref": 766 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "2": { + "Dice": 0.9013657056145675, + "FN": 53, + "FP": 12, + "IoU": 0.8204419889502762, + "TN": 438, + "TP": 297, + "n_pred": 309, + "n_ref": 350 + }, + "3": { + "Dice": 0.9370932754880694, + "FN": 6, + "FP": 52, + "IoU": 0.8816326530612245, + "TN": 310, + "TP": 432, + "n_pred": 484, + "n_ref": 438 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4288, + "FN": 93, + "FP": 264, + "IoU": 0.2729124236252546, + "TN": 1109, + "TP": 134, + "n_pred": 398, + "n_ref": 227 + }, + "2": { + "Dice": 0.0, + "FN": 160, + "FP": 0, + "IoU": 0.0, + "TN": 1440, + "TP": 0, + "n_pred": 0, + "n_ref": 160 + }, + "3": { + "Dice": 0.10404624277456648, + "FN": 310, + "FP": 0, + "IoU": 0.054878048780487805, + "TN": 1272, + "TP": 18, + "n_pred": 18, + "n_ref": 328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5688729874776386, + "FN": 482, + "FP": 0, + "IoU": 0.3975, + "TN": 0, + "TP": 318, + "n_pred": 318, + "n_ref": 800 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 212, + "IoU": 0.0, + "TN": 588, + "TP": 0, + "n_pred": 212, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6153846153846154, + "FN": 5, + "FP": 0, + "IoU": 0.4444444444444444, + "TN": 791, + "TP": 4, + "n_pred": 4, + "n_ref": 9 + }, + "2": { + "Dice": 0.8603773584905661, + "FN": 6, + "FP": 68, + "IoU": 0.7549668874172185, + "TN": 498, + "TP": 228, + "n_pred": 296, + "n_ref": 234 + }, + "3": { + "Dice": 0.9652777777777778, + "FN": 25, + "FP": 5, + "IoU": 0.9328859060402684, + "TN": 353, + "TP": 417, + "n_pred": 422, + "n_ref": 442 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.41243178754108095, + "FN": 25.960784313725487, + "FP": 14.411764705882353, + "IoU": 0.3508771125212317, + "TN": 764.235294117647, + "TP": 42.450980392156865, + "n_pred": 56.862745098039206, + "n_ref": 68.41176470588236 + }, + "mean": { + "1": { + "Dice": 0.11684782608695653, + "FN": 0.23529411764705882, + "FP": 10.529411764705882, + "IoU": 0.07624113475177305, + "TN": 833.7647058823529, + "TP": 2.5294117647058822, + "n_pred": 13.058823529411764, + "n_ref": 2.764705882352941 + }, + "2": { + "Dice": 0.44409366412925577, + "FN": 58.294117647058826, + "FP": 14.823529411764707, + "IoU": 0.37265006890285457, + "TN": 727.4117647058823, + "TP": 46.529411764705884, + "n_pred": 61.35294117647059, + "n_ref": 104.82352941176471 + }, + "3": { + "Dice": 0.6763538724070305, + "FN": 19.352941176470587, + "FP": 17.88235294117647, + "IoU": 0.6037401339090674, + "TN": 731.5294117647059, + "TP": 78.29411764705883, + "n_pred": 96.17647058823529, + "n_ref": 97.6470588235294 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.786692759295499, + "FN": 94, + "FP": 15, + "IoU": 0.6483870967741936, + "TN": 1290, + "TP": 201, + "n_pred": 216, + "n_ref": 295 + }, + "3": { + "Dice": 0.9330357142857143, + "FN": 15, + "FP": 15, + "IoU": 0.8744769874476988, + "TN": 1361, + "TP": 209, + "n_pred": 224, + "n_ref": 224 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 505, + "FP": 0, + "IoU": 0.0, + "TN": 295, + "TP": 0, + "n_pred": 0, + "n_ref": 505 + }, + "3": { + "Dice": 0.0, + "FN": 293, + "FP": 0, + "IoU": 0.0, + "TN": 507, + "TP": 0, + "n_pred": 0, + "n_ref": 293 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 792, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4673913043478261, + "FN": 4, + "FP": 94, + "IoU": 0.3049645390070922, + "TN": 659, + "TP": 43, + "n_pred": 137, + "n_ref": 47 + }, + "2": { + "Dice": 0.8933717579250721, + "FN": 23, + "FP": 14, + "IoU": 0.8072916666666666, + "TN": 608, + "TP": 155, + "n_pred": 169, + "n_ref": 178 + }, + "3": { + "Dice": 0.9835390946502057, + "FN": 13, + "FP": 3, + "IoU": 0.9676113360323887, + "TN": 306, + "TP": 478, + "n_pred": 481, + "n_ref": 491 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 74, + "IoU": 0.0, + "TN": 726, + "TP": 0, + "n_pred": 74, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 18, + "IoU": 0.0, + "TN": 782, + "TP": 0, + "n_pred": 18, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 55, + "IoU": 0.0, + "TN": 745, + "TP": 0, + "n_pred": 55, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7555555555555555, + "FN": 143, + "FP": 0, + "IoU": 0.6071428571428571, + "TN": 436, + "TP": 221, + "n_pred": 221, + "n_ref": 364 + }, + "3": { + "Dice": 0.5317919075144508, + "FN": 0, + "FP": 81, + "IoU": 0.36220472440944884, + "TN": 673, + "TP": 46, + "n_pred": 127, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.23908045977011494, + "FN": 194, + "FP": 137, + "IoU": 0.13577023498694518, + "TN": 417, + "TP": 52, + "n_pred": 189, + "n_ref": 246 + }, + "3": { + "Dice": 0.6323809523809524, + "FN": 0, + "FP": 193, + "IoU": 0.4623955431754875, + "TN": 441, + "TP": 166, + "n_pred": 359, + "n_ref": 166 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8780487804878049, + "FN": 32, + "FP": 13, + "IoU": 0.782608695652174, + "TN": 593, + "TP": 162, + "n_pred": 175, + "n_ref": 194 + }, + "3": { + "Dice": 0.9773755656108597, + "FN": 8, + "FP": 12, + "IoU": 0.9557522123893806, + "TN": 348, + "TP": 432, + "n_pred": 444, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient092_frame06.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.7502124992045073, + "FN": 22.15686274509804, + "FP": 12.72549019607843, + "IoU": 0.6821587522396704, + "TN": 698.2352941176472, + "TP": 113.94117647058823, + "n_pred": 126.66666666666667, + "n_ref": 136.09803921568627 + }, + "mean": { + "1": { + "Dice": 0.582695106630912, + "FN": 40.588235294117645, + "FP": 17.352941176470587, + "IoU": 0.5280387704997401, + "TN": 710.8235294117648, + "TP": 78.29411764705883, + "n_pred": 95.6470588235294, + "n_ref": 118.88235294117646 + }, + "2": { + "Dice": 0.77841983145487, + "FN": 17.88235294117647, + "FP": 12.352941176470589, + "IoU": 0.6844926247299964, + "TN": 710.1176470588235, + "TP": 106.70588235294117, + "n_pred": 119.05882352941177, + "n_ref": 124.58823529411765 + }, + "3": { + "Dice": 0.8895225595277397, + "FN": 8.0, + "FP": 8.470588235294118, + "IoU": 0.8339448614892745, + "TN": 673.7647058823529, + "TP": 156.8235294117647, + "n_pred": 165.2941176470588, + "n_ref": 164.8235294117647 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8975903614457831, + "FN": 25, + "FP": 9, + "IoU": 0.8142076502732241, + "TN": 617, + "TP": 149, + "n_pred": 158, + "n_ref": 174 + }, + "3": { + "Dice": 0.9621621621621622, + "FN": 3, + "FP": 4, + "IoU": 0.9270833333333334, + "TN": 704, + "TP": 89, + "n_pred": 93, + "n_ref": 92 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.011049723756906077, + "FN": 358, + "FP": 0, + "IoU": 0.005555555555555556, + "TN": 440, + "TP": 2, + "n_pred": 2, + "n_ref": 360 + }, + "2": { + "Dice": 0.0, + "FN": 4, + "FP": 0, + "IoU": 0.0, + "TN": 796, + "TP": 0, + "n_pred": 0, + "n_ref": 4 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7777777777777778, + "FN": 8, + "FP": 0, + "IoU": 0.6363636363636364, + "TN": 778, + "TP": 14, + "n_pred": 14, + "n_ref": 22 + }, + "3": { + "Dice": 0.9961587708066582, + "FN": 0, + "FP": 6, + "IoU": 0.9923469387755102, + "TN": 16, + "TP": 778, + "n_pred": 784, + "n_ref": 778 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8213333333333334, + "FN": 16, + "FP": 51, + "IoU": 0.6968325791855203, + "TN": 579, + "TP": 154, + "n_pred": 205, + "n_ref": 170 + }, + "3": { + "Dice": 0.926208651399491, + "FN": 26, + "FP": 3, + "IoU": 0.8625592417061612, + "TN": 589, + "TP": 182, + "n_pred": 185, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 245, + "IoU": 0.0, + "TN": 555, + "TP": 0, + "n_pred": 245, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9527410207939508, + "FN": 14, + "FP": 11, + "IoU": 0.9097472924187726, + "TN": 523, + "TP": 252, + "n_pred": 263, + "n_ref": 266 + }, + "3": { + "Dice": 0.9484536082474226, + "FN": 0, + "FP": 10, + "IoU": 0.9019607843137255, + "TN": 698, + "TP": 92, + "n_pred": 102, + "n_ref": 92 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9036295369211514, + "FN": 77, + "FP": 0, + "IoU": 0.8242009132420092, + "TN": 362, + "TP": 361, + "n_pred": 361, + "n_ref": 438 + }, + "3": { + "Dice": 0.9305912596401028, + "FN": 0, + "FP": 54, + "IoU": 0.8701923076923077, + "TN": 384, + "TP": 362, + "n_pred": 416, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9617834394904459, + "FN": 17, + "FP": 19, + "IoU": 0.9263803680981595, + "TN": 311, + "TP": 453, + "n_pred": 472, + "n_ref": 470 + }, + "2": { + "Dice": 0.9080882352941176, + "FN": 26, + "FP": 24, + "IoU": 0.8316498316498316, + "TN": 503, + "TP": 247, + "n_pred": 271, + "n_ref": 273 + }, + "3": { + "Dice": 0.4, + "FN": 41, + "FP": 7, + "IoU": 0.25, + "TN": 736, + "TP": 16, + "n_pred": 23, + "n_ref": 57 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.662303664921466, + "FN": 258, + "FP": 0, + "IoU": 0.49510763209393344, + "TN": 289, + "TP": 253, + "n_pred": 253, + "n_ref": 511 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8330134357005758, + "FN": 37, + "FP": 50, + "IoU": 0.7138157894736842, + "TN": 496, + "TP": 217, + "n_pred": 267, + "n_ref": 254 + }, + "3": { + "Dice": 0.9247027741083224, + "FN": 48, + "FP": 9, + "IoU": 0.85995085995086, + "TN": 393, + "TP": 350, + "n_pred": 359, + "n_ref": 398 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9485570890840652, + "FN": 15, + "FP": 26, + "IoU": 0.9021479713603818, + "TN": 1181, + "TP": 378, + "n_pred": 404, + "n_ref": 393 + }, + "2": { + "Dice": 0.819672131147541, + "FN": 0, + "FP": 11, + "IoU": 0.6944444444444444, + "TN": 1564, + "TP": 25, + "n_pred": 36, + "n_ref": 25 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9124767225325885, + "FN": 42, + "FP": 5, + "IoU": 0.839041095890411, + "TN": 508, + "TP": 245, + "n_pred": 250, + "n_ref": 287 + }, + "2": { + "Dice": 0.7763975155279503, + "FN": 25, + "FP": 47, + "IoU": 0.6345177664974619, + "TN": 603, + "TP": 125, + "n_pred": 172, + "n_ref": 150 + }, + "3": { + "Dice": 0.9604365620736699, + "FN": 11, + "FP": 18, + "IoU": 0.9238845144356955, + "TN": 419, + "TP": 352, + "n_pred": 370, + "n_ref": 363 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8723747980613893, + "FN": 72, + "FP": 7, + "IoU": 0.7736389684813754, + "TN": 451, + "TP": 270, + "n_pred": 277, + "n_ref": 342 + }, + "3": { + "Dice": 0.956989247311828, + "FN": 7, + "FP": 33, + "IoU": 0.9175257731958762, + "TN": 315, + "TP": 445, + "n_pred": 478, + "n_ref": 452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.47825428278547427, + "FN": 5.666666666666667, + "FP": 28.50980392156863, + "IoU": 0.4123358754802405, + "TN": 773.9019607843137, + "TP": 38.98039215686274, + "n_pred": 67.49019607843137, + "n_ref": 44.64705882352941 + }, + "mean": { + "1": { + "Dice": 0.2132831307418735, + "FN": 6.470588235294118, + "FP": 12.235294117647058, + "IoU": 0.1808442692480415, + "TN": 802.4117647058823, + "TP": 25.941176470588236, + "n_pred": 38.1764705882353, + "n_ref": 32.411764705882355 + }, + "2": { + "Dice": 0.652697721620786, + "FN": 5.294117647058823, + "FP": 50.76470588235294, + "IoU": 0.544831040367264, + "TN": 741.4117647058823, + "TP": 49.588235294117645, + "n_pred": 100.3529411764706, + "n_ref": 54.88235294117647 + }, + "3": { + "Dice": 0.5687819959937632, + "FN": 5.235294117647059, + "FP": 22.529411764705884, + "IoU": 0.5113323168254159, + "TN": 777.8823529411765, + "TP": 41.411764705882355, + "n_pred": 63.94117647058823, + "n_ref": 46.64705882352941 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.7909604519774012, + "FN": 0, + "FP": 111, + "IoU": 0.6542056074766355, + "TN": 479, + "TP": 210, + "n_pred": 321, + "n_ref": 210 + }, + "3": { + "Dice": 0.9168443496801706, + "FN": 39, + "FP": 0, + "IoU": 0.8464566929133859, + "TN": 546, + "TP": 215, + "n_pred": 215, + "n_ref": 254 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 796, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + }, + "2": { + "Dice": 0.7638888888888888, + "FN": 68, + "FP": 0, + "IoU": 0.6179775280898876, + "TN": 622, + "TP": 110, + "n_pred": 110, + "n_ref": 178 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6571428571428571, + "FN": 15, + "FP": 129, + "IoU": 0.48936170212765956, + "TN": 518, + "TP": 138, + "n_pred": 267, + "n_ref": 153 + }, + "3": { + "Dice": 0.613965744400527, + "FN": 14, + "FP": 279, + "IoU": 0.4429657794676806, + "TN": 274, + "TP": 233, + "n_pred": 512, + "n_ref": 247 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 23, + "IoU": 0.0, + "TN": 777, + "TP": 0, + "n_pred": 23, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 492, + "IoU": 0.0, + "TN": 308, + "TP": 0, + "n_pred": 492, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 98, + "IoU": 0.0, + "TN": 702, + "TP": 0, + "n_pred": 98, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5567010309278351, + "FN": 97, + "FP": 32, + "IoU": 0.38571428571428573, + "TN": 1390, + "TP": 81, + "n_pred": 113, + "n_ref": 178 + }, + "2": { + "Dice": 0.9447004608294931, + "FN": 7, + "FP": 17, + "IoU": 0.8951965065502183, + "TN": 1371, + "TP": 205, + "n_pred": 222, + "n_ref": 212 + }, + "3": { + "Dice": 0.9629629629629629, + "FN": 0, + "FP": 4, + "IoU": 0.9285714285714286, + "TN": 1544, + "TP": 52, + "n_pred": 56, + "n_ref": 52 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 105, + "IoU": 0.0, + "TN": 695, + "TP": 0, + "n_pred": 105, + "n_ref": 0 + }, + "2": { + "Dice": 0.759493670886076, + "FN": 0, + "FP": 114, + "IoU": 0.6122448979591837, + "TN": 506, + "TP": 180, + "n_pred": 294, + "n_ref": 180 + }, + "3": { + "Dice": 0.918918918918919, + "FN": 36, + "FP": 0, + "IoU": 0.85, + "TN": 560, + "TP": 204, + "n_pred": 204, + "n_ref": 240 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9362808842652796, + "FN": 13, + "FP": 36, + "IoU": 0.8801955990220048, + "TN": 391, + "TP": 360, + "n_pred": 396, + "n_ref": 373 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.6031398716415046, + "FN": 13.647058823529411, + "FP": 14.0, + "IoU": 0.5221602661796325, + "TN": 746.2549019607842, + "TP": 73.15686274509805, + "n_pred": 87.15686274509805, + "n_ref": 86.80392156862744 + }, + "mean": { + "1": { + "Dice": 0.5209796153777482, + "FN": 26.294117647058822, + "FP": 15.588235294117647, + "IoU": 0.45629648470773976, + "TN": 706.1764705882352, + "TP": 99.0, + "n_pred": 114.58823529411765, + "n_ref": 125.29411764705883 + }, + "2": { + "Dice": 0.546671875440945, + "FN": 6.588235294117647, + "FP": 24.176470588235293, + "IoU": 0.43804209820485923, + "TN": 768.1764705882352, + "TP": 48.11764705882353, + "n_pred": 72.29411764705883, + "n_ref": 54.705882352941174 + }, + "3": { + "Dice": 0.7417681241058207, + "FN": 8.058823529411764, + "FP": 2.235294117647059, + "IoU": 0.6721422156262986, + "TN": 764.4117647058823, + "TP": 72.3529411764706, + "n_pred": 74.58823529411765, + "n_ref": 80.41176470588235 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 172, + "IoU": 0.0, + "TN": 628, + "TP": 0, + "n_pred": 172, + "n_ref": 0 + }, + "2": { + "Dice": 0.6365280289330922, + "FN": 6, + "FP": 195, + "IoU": 0.46684350132625996, + "TN": 423, + "TP": 176, + "n_pred": 371, + "n_ref": 182 + }, + "3": { + "Dice": 0.9290322580645162, + "FN": 6, + "FP": 16, + "IoU": 0.8674698795180723, + "TN": 634, + "TP": 144, + "n_pred": 160, + "n_ref": 150 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.868421052631579, + "FN": 94, + "FP": 16, + "IoU": 0.7674418604651163, + "TN": 327, + "TP": 363, + "n_pred": 379, + "n_ref": 457 + }, + "2": { + "Dice": 0.9094488188976378, + "FN": 24, + "FP": 22, + "IoU": 0.8339350180505415, + "TN": 523, + "TP": 231, + "n_pred": 253, + "n_ref": 255 + }, + "3": { + "Dice": 0.8407643312101911, + "FN": 22, + "FP": 3, + "IoU": 0.7252747252747253, + "TN": 709, + "TP": 66, + "n_pred": 69, + "n_ref": 88 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 35, + "IoU": 0.0, + "TN": 765, + "TP": 0, + "n_pred": 35, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 53, + "IoU": 0.0, + "TN": 747, + "TP": 0, + "n_pred": 53, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 1595, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + }, + "2": { + "Dice": 0.5952380952380952, + "FN": 16, + "FP": 18, + "IoU": 0.423728813559322, + "TN": 1541, + "TP": 25, + "n_pred": 43, + "n_ref": 41 + }, + "3": { + "Dice": 0.9775725593667546, + "FN": 18, + "FP": 16, + "IoU": 0.9561290322580646, + "TN": 825, + "TP": 741, + "n_pred": 757, + "n_ref": 759 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9283865401207938, + "FN": 80, + "FP": 3, + "IoU": 0.8663446054750402, + "TN": 179, + "TP": 538, + "n_pred": 541, + "n_ref": 618 + }, + "2": { + "Dice": 0.6956521739130435, + "FN": 0, + "FP": 7, + "IoU": 0.5333333333333333, + "TN": 785, + "TP": 8, + "n_pred": 15, + "n_ref": 8 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 19, + "IoU": 0.0, + "TN": 781, + "TP": 0, + "n_pred": 19, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8821052631578947, + "FN": 109, + "FP": 3, + "IoU": 0.7890772128060264, + "TN": 269, + "TP": 419, + "n_pred": 422, + "n_ref": 528 + }, + "2": { + "Dice": 0.42857142857142855, + "FN": 7, + "FP": 1, + "IoU": 0.2727272727272727, + "TN": 789, + "TP": 3, + "n_pred": 4, + "n_ref": 10 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6018808777429467, + "FN": 97, + "FP": 30, + "IoU": 0.4304932735426009, + "TN": 577, + "TP": 96, + "n_pred": 126, + "n_ref": 193 + }, + "2": { + "Dice": 0.8086124401913876, + "FN": 41, + "FP": 39, + "IoU": 0.678714859437751, + "TN": 551, + "TP": 169, + "n_pred": 208, + "n_ref": 210 + }, + "3": { + "Dice": 0.8340807174887892, + "FN": 35, + "FP": 2, + "IoU": 0.7153846153846154, + "TN": 670, + "TP": 93, + "n_pred": 95, + "n_ref": 128 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8870431893687708, + "FN": 67, + "FP": 1, + "IoU": 0.7970149253731343, + "TN": 465, + "TP": 267, + "n_pred": 268, + "n_ref": 334 + }, + "2": { + "Dice": 0.8459958932238193, + "FN": 18, + "FP": 57, + "IoU": 0.7330960854092526, + "TN": 519, + "TP": 206, + "n_pred": 263, + "n_ref": 224 + }, + "3": { + "Dice": 0.8691588785046729, + "FN": 56, + "FP": 0, + "IoU": 0.768595041322314, + "TN": 558, + "TP": 186, + "n_pred": 186, + "n_ref": 242 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2863989/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient096_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.5573529204142676, + "FN": 20.945098039215686, + "FP": 18.462745098039214, + "IoU": 0.4873380227562684, + "TN": 735.635294117647, + "TP": 72.01568627450982, + "n_pred": 90.47843137254903, + "n_ref": 92.9607843137255 + }, + "mean": { + "1": { + "Dice": 0.3847397552456918, + "FN": 25.152941176470588, + "FP": 17.96470588235294, + "IoU": 0.3272463683792014, + "TN": 744.9882352941177, + "TP": 58.95294117647059, + "n_pred": 76.91764705882353, + "n_ref": 84.10588235294118 + }, + "2": { + "Dice": 0.5927186321867246, + "FN": 24.68235294117647, + "FP": 23.176470588235297, + "IoU": 0.4994504450881888, + "TN": 734.0117647058823, + "TP": 65.18823529411765, + "n_pred": 88.36470588235295, + "n_ref": 89.87058823529411 + }, + "3": { + "Dice": 0.6946003738103868, + "FN": 13.0, + "FP": 14.24705882352941, + "IoU": 0.635317254801415, + "TN": 727.9058823529411, + "TP": 91.90588235294118, + "n_pred": 106.15294117647059, + "n_ref": 104.90588235294118 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_001/summary.json b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_001/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..49868f84bf429c50664cee38d9f7ad02539de9c5 --- /dev/null +++ b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_001/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.779441236170071, + "FN": 1187.0, + "FP": 3094.1000000000004, + "IoU": 0.6648284985993532, + "TN": 841140.4266666668, + "TP": 9007.113333333333, + "n_pred": 12101.213333333333, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.6874408187530091, + "FN": 1522.48, + "FP": 4699.84, + "IoU": 0.5473304682449448, + "TN": 839874.74, + "TP": 8331.58, + "n_pred": 13031.42, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.7923195155815844, + "FN": 1446.94, + "FP": 2676.86, + "IoU": 0.6693452365841353, + "TN": 841696.28, + "TP": 8608.56, + "n_pred": 11285.42, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8585633741756193, + "FN": 591.58, + "FP": 1905.6, + "IoU": 0.7778097909689796, + "TN": 841850.26, + "TP": 10081.2, + "n_pred": 11986.8, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7356070543652529, + "FN": 1352, + "FP": 5904, + "IoU": 0.5817867435158501, + "TN": 1088570, + "TP": 10094, + "n_pred": 15998, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8571923863675762, + "FN": 1094, + "FP": 3025, + "IoU": 0.7500758449123233, + "TN": 1089439, + "TP": 12362, + "n_pred": 15387, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9417350195967514, + "FN": 901, + "FP": 1983, + "IoU": 0.8898858386468634, + "TN": 1079729, + "TP": 23307, + "n_pred": 25290, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5399795848928207, + "FN": 117, + "FP": 7995, + "IoU": 0.36984385924027036, + "TN": 1093047, + "TP": 4761, + "n_pred": 12756, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8748289162622869, + "FN": 1918, + "FP": 2106, + "IoU": 0.7775074643370563, + "TN": 1087834, + "TP": 14062, + "n_pred": 16168, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9347371762651782, + "FN": 815, + "FP": 1652, + "IoU": 0.8774709446707063, + "TN": 1085786, + "TP": 17667, + "n_pred": 19319, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7609254498714653, + "FN": 1322, + "FP": 3421, + "IoU": 0.6141078838174274, + "TN": 897149, + "TP": 7548, + "n_pred": 10969, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8856771317109419, + "FN": 1867, + "FP": 1210, + "IoU": 0.7948119498532942, + "TN": 894444, + "TP": 11919, + "n_pred": 13129, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9714704769114307, + "FN": 879, + "FP": 327, + "IoU": 0.9445236671420029, + "TN": 887701, + "TP": 20533, + "n_pred": 20860, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6770606719845299, + "FN": 1376, + "FP": 3968, + "IoU": 0.5117851269870273, + "TN": 898494, + "TP": 5602, + "n_pred": 9570, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8748949873984878, + "FN": 1827, + "FP": 1747, + "IoU": 0.7776118474270425, + "TN": 893369, + "TP": 12497, + "n_pred": 14244, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9649796963998583, + "FN": 930, + "FP": 355, + "IoU": 0.9323292432460898, + "TN": 890451, + "TP": 17704, + "n_pred": 18059, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8237251476582647, + "FN": 4374, + "FP": 4102, + "IoU": 0.7002828854314003, + "TN": 1397480, + "TP": 19804, + "n_pred": 23906, + "n_ref": 24178 + }, + "2": { + "Dice": 0.7749523023037276, + "FN": 1477, + "FP": 6426, + "IoU": 0.6325894932589493, + "TN": 1404250, + "TP": 13607, + "n_pred": 20033, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9396500048341874, + "FN": 979, + "FP": 2142, + "IoU": 0.886169669560143, + "TN": 1398342, + "TP": 24297, + "n_pred": 26439, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.79939706067077, + "FN": 1640, + "FP": 6345, + "IoU": 0.665829671479389, + "TN": 1401865, + "TP": 15910, + "n_pred": 22255, + "n_ref": 17550 + }, + "2": { + "Dice": 0.7775318672082925, + "FN": 1191, + "FP": 6750, + "IoU": 0.6360344669538913, + "TN": 1403942, + "TP": 13877, + "n_pred": 20627, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9202517015538718, + "FN": 1202, + "FP": 2524, + "IoU": 0.8522835394862036, + "TN": 1400536, + "TP": 21498, + "n_pred": 24022, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6854104203201901, + "FN": 3200, + "FP": 2361, + "IoU": 0.5213873827351752, + "TN": 750429, + "TP": 6058, + "n_pred": 8419, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8554538912305952, + "FN": 1089, + "FP": 1723, + "IoU": 0.7474175873529147, + "TN": 750915, + "TP": 8321, + "n_pred": 10044, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9622342113614726, + "FN": 856, + "FP": 334, + "IoU": 0.927217125382263, + "TN": 745698, + "TP": 15160, + "n_pred": 15494, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6090408295528191, + "FN": 1159, + "FP": 3667, + "IoU": 0.4378567268491555, + "TN": 753463, + "TP": 3759, + "n_pred": 7426, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8257784607041171, + "FN": 2102, + "FP": 1753, + "IoU": 0.7032561003771842, + "TN": 749057, + "TP": 9136, + "n_pred": 10889, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9099805152630439, + "FN": 1404, + "FP": 675, + "IoU": 0.8348295860808771, + "TN": 749461, + "TP": 10508, + "n_pred": 11183, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8288087761834732, + "FN": 3418, + "FP": 889, + "IoU": 0.7076630693002104, + "TN": 1063539, + "TP": 10426, + "n_pred": 11315, + "n_ref": 13844 + }, + "2": { + "Dice": 0.7778712849359968, + "FN": 1089, + "FP": 3926, + "IoU": 0.6364888373441577, + "TN": 1064476, + "TP": 8781, + "n_pred": 12707, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9238906846899795, + "FN": 1112, + "FP": 1737, + "IoU": 0.8585472419442928, + "TN": 1058131, + "TP": 17292, + "n_pred": 19029, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8274192268000318, + "FN": 2873, + "FP": 1475, + "IoU": 0.7056394286101144, + "TN": 1063501, + "TP": 10423, + "n_pred": 11898, + "n_ref": 13296 + }, + "2": { + "Dice": 0.792406972846128, + "FN": 1345, + "FP": 3609, + "IoU": 0.6561871052814213, + "TN": 1063863, + "TP": 9455, + "n_pred": 13064, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9065021052293254, + "FN": 1124, + "FP": 1785, + "IoU": 0.8289930045264828, + "TN": 1061261, + "TP": 14102, + "n_pred": 15887, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5551313307879847, + "FN": 3098, + "FP": 6573, + "IoU": 0.3842088506844954, + "TN": 1090215, + "TP": 6034, + "n_pred": 12607, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8495171345910925, + "FN": 1058, + "FP": 2635, + "IoU": 0.738400510023376, + "TN": 1091803, + "TP": 10424, + "n_pred": 13059, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8960657155209685, + "FN": 1133, + "FP": 1271, + "IoU": 0.8117020443330462, + "TN": 1093153, + "TP": 10363, + "n_pred": 11634, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.26031953048581674, + "FN": 1056, + "FP": 10287, + "IoU": 0.14963640452807556, + "TN": 1092581, + "TP": 1996, + "n_pred": 12283, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8553702121335959, + "FN": 840, + "FP": 3053, + "IoU": 0.747289840960727, + "TN": 1090515, + "TP": 11512, + "n_pred": 14565, + "n_ref": 12352 + }, + "3": { + "Dice": 0.749182389937107, + "FN": 302, + "FP": 1692, + "IoU": 0.5989541432019309, + "TN": 1100948, + "TP": 2978, + "n_pred": 4670, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6537770221034734, + "FN": 2435, + "FP": 4692, + "IoU": 0.4856379907621247, + "TN": 1133024, + "TP": 6729, + "n_pred": 11421, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8798036784982417, + "FN": 2028, + "FP": 2723, + "IoU": 0.7854013279732599, + "TN": 1124741, + "TP": 17388, + "n_pred": 20111, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9342314450673583, + "FN": 765, + "FP": 807, + "IoU": 0.8765800423961686, + "TN": 1134143, + "TP": 11165, + "n_pred": 11972, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.25368975126432036, + "FN": 1237, + "FP": 5994, + "IoU": 0.14527186761229313, + "TN": 1138420, + "TP": 1229, + "n_pred": 7223, + "n_ref": 2466 + }, + "2": { + "Dice": 0.5069821741277895, + "FN": 13145, + "FP": 8815, + "IoU": 0.33956873477489397, + "TN": 1113629, + "TP": 11291, + "n_pred": 20106, + "n_ref": 24436 + }, + "3": { + "Dice": 0.25058048618679807, + "FN": 72, + "FP": 15743, + "IoU": 0.1432363616663958, + "TN": 1128421, + "TP": 2644, + "n_pred": 18387, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9234274142513605, + "FN": 902, + "FP": 913, + "IoU": 0.857747472372443, + "TN": 788041, + "TP": 10944, + "n_pred": 11857, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8590174966352625, + "FN": 975, + "FP": 1539, + "IoU": 0.7528752580359775, + "TN": 790627, + "TP": 7659, + "n_pred": 9198, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9481322864620509, + "FN": 683, + "FP": 189, + "IoU": 0.9013797783306944, + "TN": 791958, + "TP": 7970, + "n_pred": 8159, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5012552901513522, + "FN": 445, + "FP": 6508, + "IoU": 0.33445008136307075, + "TN": 790353, + "TP": 3494, + "n_pred": 10002, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8843021398914085, + "FN": 1577, + "FP": 1321, + "IoU": 0.7926000143133185, + "TN": 786827, + "TP": 11075, + "n_pred": 12396, + "n_ref": 12652 + }, + "3": { + "Dice": 0.7854843429909277, + "FN": 162, + "FP": 1304, + "IoU": 0.6467469879518072, + "TN": 796650, + "TP": 2684, + "n_pred": 3988, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7983777520278099, + "FN": 2479, + "FP": 3437, + "IoU": 0.6644165863066538, + "TN": 1330211, + "TP": 11713, + "n_pred": 15150, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8567458663331944, + "FN": 1357, + "FP": 1736, + "IoU": 0.7493923189110355, + "TN": 1335498, + "TP": 9249, + "n_pred": 10985, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9705788202427029, + "FN": 652, + "FP": 359, + "IoU": 0.9428393735511958, + "TN": 1330153, + "TP": 16676, + "n_pred": 17035, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5503916449086161, + "FN": 598, + "FP": 8012, + "IoU": 0.3796829971181556, + "TN": 1333960, + "TP": 5270, + "n_pred": 13282, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8627690304731681, + "FN": 1511, + "FP": 1862, + "IoU": 0.7586576989124213, + "TN": 1333864, + "TP": 10603, + "n_pred": 12465, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9480525033135234, + "FN": 531, + "FP": 684, + "IoU": 0.9012355714517964, + "TN": 1335538, + "TP": 11087, + "n_pred": 11771, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8462856934466285, + "FN": 859, + "FP": 3356, + "IoU": 0.7335314199013782, + "TN": 836150, + "TP": 11603, + "n_pred": 14959, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8298641649565133, + "FN": 956, + "FP": 2526, + "IoU": 0.709203273759813, + "TN": 839994, + "TP": 8492, + "n_pred": 11018, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9643546874137836, + "FN": 1011, + "FP": 281, + "IoU": 0.931163088070755, + "TN": 833199, + "TP": 17477, + "n_pred": 17758, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7480970083200567, + "FN": 599, + "FP": 3670, + "IoU": 0.5975678733031674, + "TN": 841360, + "TP": 6339, + "n_pred": 10009, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8620124266482568, + "FN": 1303, + "FP": 1895, + "IoU": 0.757488435580496, + "TN": 838781, + "TP": 9989, + "n_pred": 11884, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9513004553523192, + "FN": 670, + "FP": 592, + "IoU": 0.9071239328819547, + "TN": 838380, + "TP": 12326, + "n_pred": 12918, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.750624043803849, + "FN": 1195, + "FP": 1902, + "IoU": 0.6007991750451147, + "TN": 844210, + "TP": 4661, + "n_pred": 6563, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8239625747206099, + "FN": 1209, + "FP": 2855, + "IoU": 0.7006261510128914, + "TN": 838393, + "TP": 9511, + "n_pred": 12366, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9111507656554758, + "FN": 1978, + "FP": 163, + "IoU": 0.8368015854866987, + "TN": 838849, + "TP": 10978, + "n_pred": 11141, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.48972647559219995, + "FN": 233, + "FP": 3666, + "IoU": 0.324263431542461, + "TN": 846198, + "TP": 1871, + "n_pred": 5537, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8580216062435123, + "FN": 1427, + "FP": 2266, + "IoU": 0.7513466199838406, + "TN": 837116, + "TP": 11159, + "n_pred": 13425, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9194247097556749, + "FN": 787, + "FP": 608, + "IoU": 0.8508659397049391, + "TN": 842614, + "TP": 7959, + "n_pred": 8567, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6872361884128347, + "FN": 3889, + "FP": 4484, + "IoU": 0.5235033007056681, + "TN": 779468, + "TP": 9199, + "n_pred": 13683, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7448879732165851, + "FN": 1623, + "FP": 3330, + "IoU": 0.5934832567301379, + "TN": 784856, + "TP": 7231, + "n_pred": 10561, + "n_ref": 8854 + }, + "3": { + "Dice": 0.8655651118803754, + "FN": 1331, + "FP": 2436, + "IoU": 0.7629923241474771, + "TN": 781146, + "TP": 12127, + "n_pred": 14563, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5539818671894143, + "FN": 2016, + "FP": 7085, + "IoU": 0.3831085203009557, + "TN": 782287, + "TP": 5652, + "n_pred": 12737, + "n_ref": 7668 + }, + "2": { + "Dice": 0.7972789115646258, + "FN": 1125, + "FP": 3196, + "IoU": 0.6628959276018099, + "TN": 784222, + "TP": 8497, + "n_pred": 11693, + "n_ref": 9622 + }, + "3": { + "Dice": 0.8138736263736264, + "FN": 737, + "FP": 3057, + "IoU": 0.6861609727851766, + "TN": 784951, + "TP": 8295, + "n_pred": 11352, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6840236686390533, + "FN": 2064, + "FP": 7548, + "IoU": 0.5197841726618705, + "TN": 876654, + "TP": 10404, + "n_pred": 17952, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7833213901827302, + "FN": 1593, + "FP": 3245, + "IoU": 0.6438194802326438, + "TN": 883087, + "TP": 8745, + "n_pred": 11990, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9237333743368955, + "FN": 237, + "FP": 1747, + "IoU": 0.8582755911136509, + "TN": 882671, + "TP": 12015, + "n_pred": 13762, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49715585893060293, + "FN": 1112, + "FP": 9496, + "IoU": 0.3308099924299773, + "TN": 880818, + "TP": 5244, + "n_pred": 14740, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8337357154353774, + "FN": 1158, + "FP": 2974, + "IoU": 0.7148771736130278, + "TN": 882178, + "TP": 10360, + "n_pred": 13334, + "n_ref": 11518 + }, + "3": { + "Dice": 0.8963692177410818, + "FN": 358, + "FP": 1600, + "IoU": 0.8122002685593708, + "TN": 886244, + "TP": 8468, + "n_pred": 10068, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7702357284862255, + "FN": 1728, + "FP": 3935, + "IoU": 0.6263279445727483, + "TN": 746893, + "TP": 9492, + "n_pred": 13427, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9168552036199095, + "FN": 686, + "FP": 1078, + "IoU": 0.8464751958224543, + "TN": 750558, + "TP": 9726, + "n_pred": 10804, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9746497947437471, + "FN": 237, + "FP": 362, + "IoU": 0.9505530790820538, + "TN": 749934, + "TP": 11515, + "n_pred": 11877, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4425398811385674, + "FN": 255, + "FP": 8656, + "IoU": 0.28414203084832906, + "TN": 749600, + "TP": 3537, + "n_pred": 12193, + "n_ref": 3792 + }, + "2": { + "Dice": 0.9002251199932039, + "FN": 1035, + "FP": 1314, + "IoU": 0.8185539935115094, + "TN": 749102, + "TP": 10597, + "n_pred": 11911, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9406928948913682, + "FN": 426, + "FP": 382, + "IoU": 0.8880266075388027, + "TN": 754832, + "TP": 6408, + "n_pred": 6790, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6701296433716006, + "FN": 266, + "FP": 7291, + "IoU": 0.5039059935665988, + "TN": 980095, + "TP": 7676, + "n_pred": 14967, + "n_ref": 7942 + }, + "2": { + "Dice": 0.7859150610722134, + "FN": 1059, + "FP": 3130, + "IoU": 0.6473312005388112, + "TN": 983450, + "TP": 7689, + "n_pred": 10819, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9678141947653855, + "FN": 128, + "FP": 964, + "IoU": 0.9376356367789834, + "TN": 977818, + "TP": 16418, + "n_pred": 17382, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.39041365725541693, + "FN": 269, + "FP": 9015, + "IoU": 0.24255527453699927, + "TN": 983071, + "TP": 2973, + "n_pred": 11988, + "n_ref": 3242 + }, + "2": { + "Dice": 0.771758851277798, + "FN": 890, + "FP": 3513, + "IoU": 0.6283447286232802, + "TN": 983481, + "TP": 7444, + "n_pred": 10957, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9109892978334638, + "FN": 144, + "FP": 1902, + "IoU": 0.836529242569511, + "TN": 982812, + "TP": 10470, + "n_pred": 12372, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8993298421650127, + "FN": 2045, + "FP": 704, + "IoU": 0.8170747937183923, + "TN": 742988, + "TP": 12279, + "n_pred": 12983, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8718179770218518, + "FN": 1072, + "FP": 1204, + "IoU": 0.7727635782747604, + "TN": 748000, + "TP": 7740, + "n_pred": 8944, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9674696676630913, + "FN": 298, + "FP": 442, + "IoU": 0.9369891008174387, + "TN": 746272, + "TP": 11004, + "n_pred": 11446, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6653651482284888, + "FN": 635, + "FP": 3993, + "IoU": 0.49853721963376313, + "TN": 748787, + "TP": 4601, + "n_pred": 8594, + "n_ref": 5236 + }, + "2": { + "Dice": 0.869198312236287, + "FN": 680, + "FP": 1924, + "IoU": 0.7686567164179104, + "TN": 746760, + "TP": 8652, + "n_pred": 10576, + "n_ref": 9332 + }, + "3": { + "Dice": 0.7318314638514469, + "FN": 310, + "FP": 2535, + "IoU": 0.5770774490857737, + "TN": 751289, + "TP": 3882, + "n_pred": 6417, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7214341387373344, + "FN": 1004, + "FP": 4357, + "IoU": 0.5642526213118751, + "TN": 626673, + "TP": 6942, + "n_pred": 11299, + "n_ref": 7946 + }, + "2": { + "Dice": 0.7107184579439252, + "FN": 499, + "FP": 3463, + "IoU": 0.5512515573677653, + "TN": 630147, + "TP": 4867, + "n_pred": 8330, + "n_ref": 5366 + }, + "3": { + "Dice": 0.6612773649327174, + "FN": 749, + "FP": 5997, + "IoU": 0.4939614432525692, + "TN": 625645, + "TP": 6585, + "n_pred": 12582, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3892608372218841, + "FN": 142, + "FP": 8889, + "IoU": 0.241665966915778, + "TN": 627067, + "TP": 2878, + "n_pred": 11767, + "n_ref": 3020 + }, + "2": { + "Dice": 0.8021586864163509, + "FN": 366, + "FP": 3080, + "IoU": 0.669670245398773, + "TN": 628544, + "TP": 6986, + "n_pred": 10066, + "n_ref": 7352 + }, + "3": { + "Dice": 0.3412157462790374, + "FN": 303, + "FP": 9169, + "IoU": 0.20570230607966458, + "TN": 627051, + "TP": 2453, + "n_pred": 11622, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6714096833091985, + "FN": 4776, + "FP": 5662, + "IoU": 0.5053549426594636, + "TN": 961938, + "TP": 10664, + "n_pred": 16326, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8010652214539339, + "FN": 1323, + "FP": 2935, + "IoU": 0.6681474553814979, + "TN": 970209, + "TP": 8573, + "n_pred": 11508, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9664727892416553, + "FN": 174, + "FP": 731, + "IoU": 0.9351207971897627, + "TN": 969091, + "TP": 13044, + "n_pred": 13775, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.610572641064599, + "FN": 361, + "FP": 7072, + "IoU": 0.4394419306184012, + "TN": 969780, + "TP": 5827, + "n_pred": 12899, + "n_ref": 6188 + }, + "2": { + "Dice": 0.7809926652567161, + "FN": 1278, + "FP": 3589, + "IoU": 0.6406792174234035, + "TN": 969495, + "TP": 8678, + "n_pred": 12267, + "n_ref": 9956 + }, + "3": { + "Dice": 0.6938362684435982, + "FN": 159, + "FP": 4987, + "IoU": 0.5312016033524642, + "TN": 972063, + "TP": 5831, + "n_pred": 10818, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9015588039061079, + "FN": 1316, + "FP": 1930, + "IoU": 0.8207620099392601, + "TN": 1030466, + "TP": 14864, + "n_pred": 16794, + "n_ref": 16180 + }, + "2": { + "Dice": 0.7881519639407598, + "FN": 752, + "FP": 3525, + "IoU": 0.6503719447396387, + "TN": 1036343, + "TP": 7956, + "n_pred": 11481, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9468694449930871, + "FN": 275, + "FP": 1070, + "IoU": 0.8990997749437359, + "TN": 1035246, + "TP": 11985, + "n_pred": 13055, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.566537643787821, + "FN": 234, + "FP": 7717, + "IoU": 0.3952232448467331, + "TN": 1035429, + "TP": 5196, + "n_pred": 12913, + "n_ref": 5430 + }, + "2": { + "Dice": 0.7618100447538538, + "FN": 1130, + "FP": 4618, + "IoU": 0.6152610441767068, + "TN": 1033636, + "TP": 9192, + "n_pred": 13810, + "n_ref": 10322 + }, + "3": { + "Dice": 0.5197350708093263, + "FN": 254, + "FP": 8665, + "IoU": 0.351109494361586, + "TN": 1034831, + "TP": 4826, + "n_pred": 13491, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8132939202684349, + "FN": 982, + "FP": 3692, + "IoU": 0.6853372828867645, + "TN": 474362, + "TP": 10180, + "n_pred": 13872, + "n_ref": 11162 + }, + "2": { + "Dice": 0.654336338203295, + "FN": 612, + "FP": 1612, + "IoU": 0.48625548625548626, + "TN": 484887, + "TP": 2105, + "n_pred": 3717, + "n_ref": 2717 + }, + "3": { + "Dice": 0.911058919636475, + "FN": 190, + "FP": 681, + "IoU": 0.8366466616654163, + "TN": 483884, + "TP": 4461, + "n_pred": 5142, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6475418355680282, + "FN": 421, + "FP": 6361, + "IoU": 0.4787888103289271, + "TN": 476204, + "TP": 6230, + "n_pred": 12591, + "n_ref": 6651 + }, + "2": { + "Dice": 0.7754822821179368, + "FN": 526, + "FP": 1115, + "IoU": 0.6332960893854749, + "TN": 484741, + "TP": 2834, + "n_pred": 3949, + "n_ref": 3360 + }, + "3": { + "Dice": 0.7973825660200982, + "FN": 84, + "FP": 783, + "IoU": 0.6630392537893509, + "TN": 486643, + "TP": 1706, + "n_pred": 2489, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9012486531026177, + "FN": 1657, + "FP": 1459, + "IoU": 0.82024805307182, + "TN": 463145, + "TP": 14219, + "n_pred": 15678, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7279245283018868, + "FN": 661, + "FP": 2223, + "IoU": 0.5722337585286266, + "TN": 473738, + "TP": 3858, + "n_pred": 6081, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9400219699743684, + "FN": 542, + "FP": 277, + "IoU": 0.88683156003869, + "TN": 473243, + "TP": 6418, + "n_pred": 6695, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9071821789783638, + "FN": 982, + "FP": 1193, + "IoU": 0.8301312089971884, + "TN": 467676, + "TP": 10629, + "n_pred": 11822, + "n_ref": 11611 + }, + "2": { + "Dice": 0.7965669612508498, + "FN": 975, + "FP": 1419, + "IoU": 0.661912159299534, + "TN": 473399, + "TP": 4687, + "n_pred": 6106, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8194940245227379, + "FN": 166, + "FP": 997, + "IoU": 0.6941887983171181, + "TN": 476677, + "TP": 2640, + "n_pred": 3637, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8335112059765208, + "FN": 5052, + "FP": 1188, + "IoU": 0.7145471180237878, + "TN": 622780, + "TP": 15620, + "n_pred": 16808, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8086615032180648, + "FN": 1653, + "FP": 1855, + "IoU": 0.6787839941397308, + "TN": 633719, + "TP": 7413, + "n_pred": 9268, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9451379026833097, + "FN": 1353, + "FP": 115, + "IoU": 0.8959824275490682, + "TN": 630527, + "TP": 12645, + "n_pred": 12760, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8568260475118443, + "FN": 2582, + "FP": 1679, + "IoU": 0.7495150196931397, + "TN": 627629, + "TP": 12750, + "n_pred": 14429, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8847754096968667, + "FN": 1746, + "FP": 968, + "IoU": 0.7933607431094868, + "TN": 631506, + "TP": 10420, + "n_pred": 11388, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9289425824889582, + "FN": 411, + "FP": 683, + "IoU": 0.8673135233474834, + "TN": 636395, + "TP": 7151, + "n_pred": 7834, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8893805309734514, + "FN": 2354, + "FP": 2546, + "IoU": 0.8007968127490039, + "TN": 539882, + "TP": 19698, + "n_pred": 22244, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7563894523326572, + "FN": 740, + "FP": 1662, + "IoU": 0.6082205186755831, + "TN": 558349, + "TP": 3729, + "n_pred": 5391, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9482127959956362, + "FN": 509, + "FP": 298, + "IoU": 0.9015253203172666, + "TN": 556285, + "TP": 7388, + "n_pred": 7686, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6469607643830046, + "FN": 476, + "FP": 8207, + "IoU": 0.4781537352004327, + "TN": 547841, + "TP": 7956, + "n_pred": 16163, + "n_ref": 8432 + }, + "2": { + "Dice": 0.819359756097561, + "FN": 563, + "FP": 1333, + "IoU": 0.6939961265332473, + "TN": 558284, + "TP": 4300, + "n_pred": 5633, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8503978779840848, + "FN": 246, + "FP": 882, + "IoU": 0.7397323488694048, + "TN": 560146, + "TP": 3206, + "n_pred": 4088, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7319884726224783, + "FN": 1479, + "FP": 2985, + "IoU": 0.5772727272727273, + "TN": 408320, + "TP": 6096, + "n_pred": 9081, + "n_ref": 7575 + }, + "2": { + "Dice": 0.31197923780904246, + "FN": 1714, + "FP": 3323, + "IoU": 0.18481955008901116, + "TN": 412701, + "TP": 1142, + "n_pred": 4465, + "n_ref": 2856 + }, + "3": { + "Dice": 0.7317443737536796, + "FN": 346, + "FP": 2479, + "IoU": 0.5769691524408506, + "TN": 412202, + "TP": 3853, + "n_pred": 6332, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6169580996370835, + "FN": 997, + "FP": 3647, + "IoU": 0.446087786259542, + "TN": 410496, + "TP": 3740, + "n_pred": 7387, + "n_ref": 4737 + }, + "2": { + "Dice": 0.29173895635926866, + "FN": 1900, + "FP": 3407, + "IoU": 0.17078125, + "TN": 412480, + "TP": 1093, + "n_pred": 4500, + "n_ref": 2993 + }, + "3": { + "Dice": 0.5604426002766252, + "FN": 357, + "FP": 2821, + "IoU": 0.3893159108378171, + "TN": 413676, + "TP": 2026, + "n_pred": 4847, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8934222042684979, + "FN": 296, + "FP": 2870, + "IoU": 0.8073740569481626, + "TN": 480074, + "TP": 13270, + "n_pred": 16140, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8392050587172538, + "FN": 1169, + "FP": 1323, + "IoU": 0.7229571984435798, + "TN": 487515, + "TP": 6503, + "n_pred": 7826, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9422644338915271, + "FN": 232, + "FP": 692, + "IoU": 0.8908317580340265, + "TN": 488046, + "TP": 7540, + "n_pred": 8232, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8940646130728775, + "FN": 767, + "FP": 2194, + "IoU": 0.8084239130434783, + "TN": 481054, + "TP": 12495, + "n_pred": 14689, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8047080333676151, + "FN": 1434, + "FP": 1984, + "IoU": 0.6732313575525812, + "TN": 486050, + "TP": 7042, + "n_pred": 9026, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8267031327697663, + "FN": 75, + "FP": 1319, + "IoU": 0.7045984318711591, + "TN": 491791, + "TP": 3325, + "n_pred": 4644, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_001/summary_cross_val.json b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_001/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..d0c2f25fa4eb9bb1d59598e6fd75eacf57041141 --- /dev/null +++ b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_001/summary_cross_val.json @@ -0,0 +1,4704 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.7234488478856914, + "FN": 37.86666666666667, + "FP": 36.77333333333333, + "IoU": 0.6465577709202542, + "TN": 996.6399999999999, + "TP": 176.72, + "n_pred": 213.49333333333334, + "n_ref": 214.58666666666667 + }, + "mean": { + "1": { + "Dice": 0.5370325589000544, + "FN": 65.6, + "FP": 34.04, + "IoU": 0.4782794813134932, + "TN": 1031.52, + "TP": 116.84, + "n_pred": 150.88, + "n_ref": 182.44 + }, + "2": { + "Dice": 0.7828237438811444, + "FN": 34.88, + "FP": 28.24, + "IoU": 0.6789392955021895, + "TN": 1025.84, + "TP": 159.04, + "n_pred": 187.28, + "n_ref": 193.92 + }, + "3": { + "Dice": 0.8504902408758754, + "FN": 13.12, + "FP": 48.04, + "IoU": 0.7824545359450801, + "TN": 932.56, + "TP": 254.28, + "n_pred": 302.32, + "n_ref": 267.4 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7947019867549668, + "FN": 120, + "FP": 4, + "IoU": 0.6593406593406593, + "TN": 1236, + "TP": 240, + "n_pred": 244, + "n_ref": 360 + }, + "2": { + "Dice": 0.6790450928381963, + "FN": 36, + "FP": 85, + "IoU": 0.5140562248995983, + "TN": 1351, + "TP": 128, + "n_pred": 213, + "n_ref": 164 + }, + "3": { + "Dice": 0.9387755102040817, + "FN": 10, + "FP": 8, + "IoU": 0.8846153846153846, + "TN": 1444, + "TP": 138, + "n_pred": 146, + "n_ref": 148 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8108108108108109, + "FN": 7, + "FP": 0, + "IoU": 0.6818181818181818, + "TN": 778, + "TP": 15, + "n_pred": 15, + "n_ref": 22 + }, + "3": { + "Dice": 0.9955214331413947, + "FN": 0, + "FP": 7, + "IoU": 0.9910828025477707, + "TN": 15, + "TP": 778, + "n_pred": 785, + "n_ref": 778 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 381, + "IoU": 0.0, + "TN": 419, + "TP": 0, + "n_pred": 381, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 14, + "IoU": 0.0, + "TN": 786, + "TP": 0, + "n_pred": 14, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7816411682892906, + "FN": 157, + "FP": 0, + "IoU": 0.6415525114155252, + "TN": 1162, + "TP": 281, + "n_pred": 281, + "n_ref": 438 + }, + "3": { + "Dice": 0.8302752293577982, + "FN": 0, + "FP": 148, + "IoU": 0.7098039215686275, + "TN": 1090, + "TP": 362, + "n_pred": 510, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8835534213685474, + "FN": 84, + "FP": 13, + "IoU": 0.7913978494623656, + "TN": 1135, + "TP": 368, + "n_pred": 381, + "n_ref": 452 + }, + "2": { + "Dice": 0.9316939890710383, + "FN": 11, + "FP": 39, + "IoU": 0.8721227621483376, + "TN": 1209, + "TP": 341, + "n_pred": 380, + "n_ref": 352 + }, + "3": { + "Dice": 0.9631236442516269, + "FN": 34, + "FP": 0, + "IoU": 0.9288702928870293, + "TN": 1122, + "TP": 444, + "n_pred": 444, + "n_ref": 478 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.937125748502994, + "FN": 35, + "FP": 49, + "IoU": 0.8816901408450705, + "TN": 890, + "TP": 626, + "n_pred": 675, + "n_ref": 661 + }, + "2": { + "Dice": 0.926829268292683, + "FN": 69, + "FP": 21, + "IoU": 0.8636363636363636, + "TN": 940, + "TP": 570, + "n_pred": 591, + "n_ref": 639 + }, + "3": { + "Dice": 0.8939393939393939, + "FN": 4, + "FP": 10, + "IoU": 0.8082191780821918, + "TN": 1527, + "TP": 59, + "n_pred": 69, + "n_ref": 63 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.869281045751634, + "FN": 21, + "FP": 19, + "IoU": 0.7687861271676301, + "TN": 1427, + "TP": 133, + "n_pred": 152, + "n_ref": 154 + }, + "2": { + "Dice": 0.8071748878923767, + "FN": 84, + "FP": 2, + "IoU": 0.6766917293233082, + "TN": 1334, + "TP": 180, + "n_pred": 182, + "n_ref": 264 + }, + "3": { + "Dice": 0.3076923076923077, + "FN": 0, + "FP": 54, + "IoU": 0.18181818181818182, + "TN": 1534, + "TP": 12, + "n_pred": 66, + "n_ref": 12 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8014888337468983, + "FN": 12, + "FP": 148, + "IoU": 0.6687370600414079, + "TN": 1117, + "TP": 323, + "n_pred": 471, + "n_ref": 335 + }, + "2": { + "Dice": 0.0, + "FN": 2, + "FP": 0, + "IoU": 0.0, + "TN": 1598, + "TP": 0, + "n_pred": 0, + "n_ref": 2 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 466, + "FP": 0, + "IoU": 0.0, + "TN": 1134, + "TP": 0, + "n_pred": 0, + "n_ref": 466 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5081081081081081, + "FN": 0, + "FP": 91, + "IoU": 0.34057971014492755, + "TN": 662, + "TP": 47, + "n_pred": 138, + "n_ref": 47 + }, + "2": { + "Dice": 0.9014084507042254, + "FN": 18, + "FP": 17, + "IoU": 0.8205128205128205, + "TN": 605, + "TP": 160, + "n_pred": 177, + "n_ref": 178 + }, + "3": { + "Dice": 0.978328173374613, + "FN": 17, + "FP": 4, + "IoU": 0.9575757575757575, + "TN": 305, + "TP": 474, + "n_pred": 478, + "n_ref": 491 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 106, + "IoU": 0.0, + "TN": 1494, + "TP": 0, + "n_pred": 106, + "n_ref": 0 + }, + "2": { + "Dice": 0.7211328976034859, + "FN": 4, + "FP": 252, + "IoU": 0.5638841567291312, + "TN": 1013, + "TP": 331, + "n_pred": 583, + "n_ref": 335 + }, + "3": { + "Dice": 0.9688826025459689, + "FN": 40, + "FP": 4, + "IoU": 0.9396433470507545, + "TN": 871, + "TP": 685, + "n_pred": 689, + "n_ref": 725 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9414225941422594, + "FN": 13, + "FP": 15, + "IoU": 0.8893280632411067, + "TN": 547, + "TP": 225, + "n_pred": 240, + "n_ref": 238 + }, + "3": { + "Dice": 0.9767857142857143, + "FN": 13, + "FP": 13, + "IoU": 0.9546247818499127, + "TN": 227, + "TP": 547, + "n_pred": 560, + "n_ref": 560 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9136420525657072, + "FN": 59, + "FP": 10, + "IoU": 0.8410138248847926, + "TN": 1166, + "TP": 365, + "n_pred": 375, + "n_ref": 424 + }, + "3": { + "Dice": 0.9725363489499192, + "FN": 4, + "FP": 30, + "IoU": 0.9465408805031447, + "TN": 964, + "TP": 602, + "n_pred": 632, + "n_ref": 606 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.06060606060606061, + "FN": 775, + "FP": 0, + "IoU": 0.03125, + "TN": 800, + "TP": 25, + "n_pred": 25, + "n_ref": 800 + }, + "2": { + "Dice": 0.8865497076023392, + "FN": 71, + "FP": 26, + "IoU": 0.7962184873949579, + "TN": 1124, + "TP": 379, + "n_pred": 405, + "n_ref": 450 + }, + "3": { + "Dice": 0.3888048411497731, + "FN": 25, + "FP": 783, + "IoU": 0.24131455399061033, + "TN": 535, + "TP": 257, + "n_pred": 1040, + "n_ref": 282 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9612711022840119, + "FN": 36, + "FP": 3, + "IoU": 0.9254302103250478, + "TN": 1077, + "TP": 484, + "n_pred": 487, + "n_ref": 520 + }, + "2": { + "Dice": 0.8594164456233422, + "FN": 19, + "FP": 34, + "IoU": 0.7534883720930232, + "TN": 1385, + "TP": 162, + "n_pred": 196, + "n_ref": 181 + }, + "3": { + "Dice": 0.8905109489051095, + "FN": 11, + "FP": 4, + "IoU": 0.8026315789473685, + "TN": 1524, + "TP": 61, + "n_pred": 65, + "n_ref": 72 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9422066549912435, + "FN": 18, + "FP": 15, + "IoU": 0.890728476821192, + "TN": 1298, + "TP": 269, + "n_pred": 284, + "n_ref": 287 + }, + "2": { + "Dice": 0.8070175438596491, + "FN": 44, + "FP": 22, + "IoU": 0.6764705882352942, + "TN": 1396, + "TP": 138, + "n_pred": 160, + "n_ref": 182 + }, + "3": { + "Dice": 0.9846423870118473, + "FN": 6, + "FP": 29, + "IoU": 0.9697493517718236, + "TN": 443, + "TP": 1122, + "n_pred": 1151, + "n_ref": 1128 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9013157894736842, + "FN": 60, + "FP": 0, + "IoU": 0.8203592814371258, + "TN": 1266, + "TP": 274, + "n_pred": 274, + "n_ref": 334 + }, + "2": { + "Dice": 0.665158371040724, + "FN": 160, + "FP": 136, + "IoU": 0.49830508474576274, + "TN": 1010, + "TP": 294, + "n_pred": 430, + "n_ref": 454 + }, + "3": { + "Dice": 0.8108108108108109, + "FN": 129, + "FP": 4, + "IoU": 0.6818181818181818, + "TN": 1182, + "TP": 285, + "n_pred": 289, + "n_ref": 414 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9328621908127208, + "FN": 13, + "FP": 6, + "IoU": 0.8741721854304636, + "TN": 649, + "TP": 132, + "n_pred": 138, + "n_ref": 145 + }, + "2": { + "Dice": 0.905829596412556, + "FN": 8, + "FP": 34, + "IoU": 0.8278688524590164, + "TN": 556, + "TP": 202, + "n_pred": 236, + "n_ref": 210 + }, + "3": { + "Dice": 0.96248382923674, + "FN": 29, + "FP": 0, + "IoU": 0.9276807980049875, + "TN": 399, + "TP": 372, + "n_pred": 372, + "n_ref": 401 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.7692307692307693, + "FN": 110, + "FP": 13, + "IoU": 0.625, + "TN": 472, + "TP": 205, + "n_pred": 218, + "n_ref": 315 + }, + "3": { + "Dice": 0.7447306791569087, + "FN": 6, + "FP": 103, + "IoU": 0.5932835820895522, + "TN": 532, + "TP": 159, + "n_pred": 262, + "n_ref": 165 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient095_frame12.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.6864905534548132, + "FN": 11.638888888888891, + "FP": 20.083333333333336, + "IoU": 0.6068122432007317, + "TN": 983.25, + "TP": 85.02777777777777, + "n_pred": 105.1111111111111, + "n_ref": 96.66666666666667 + }, + "mean": { + "1": { + "Dice": 0.5934830503521431, + "FN": 17.291666666666668, + "FP": 30.166666666666668, + "IoU": 0.4954904604312722, + "TN": 983.4166666666666, + "TP": 69.125, + "n_pred": 99.29166666666667, + "n_ref": 86.41666666666667 + }, + "2": { + "Dice": 0.7444794411614845, + "FN": 14.125, + "FP": 19.125, + "IoU": 0.6711169846940244, + "TN": 941.2916666666666, + "TP": 125.45833333333333, + "n_pred": 144.58333333333334, + "n_ref": 139.58333333333334 + }, + "3": { + "Dice": 0.7215091688508124, + "FN": 3.5, + "FP": 10.958333333333334, + "IoU": 0.6538292844768985, + "TN": 1025.0416666666667, + "TP": 60.5, + "n_pred": 71.45833333333333, + "n_ref": 64.0 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7613168724279835, + "FN": 85, + "FP": 31, + "IoU": 0.6146179401993356, + "TN": 1299, + "TP": 185, + "n_pred": 216, + "n_ref": 270 + }, + "2": { + "Dice": 0.963855421686747, + "FN": 4, + "FP": 2, + "IoU": 0.9302325581395349, + "TN": 1514, + "TP": 80, + "n_pred": 82, + "n_ref": 84 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8641975308641975, + "FN": 10, + "FP": 12, + "IoU": 0.7608695652173914, + "TN": 1508, + "TP": 70, + "n_pred": 82, + "n_ref": 80 + }, + "2": { + "Dice": 0.8082474226804124, + "FN": 14, + "FP": 79, + "IoU": 0.6782006920415224, + "TN": 1311, + "TP": 196, + "n_pred": 275, + "n_ref": 210 + }, + "3": { + "Dice": 0.9435336976320583, + "FN": 19, + "FP": 12, + "IoU": 0.8931034482758621, + "TN": 1310, + "TP": 259, + "n_pred": 271, + "n_ref": 278 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 265, + "IoU": 0.0, + "TN": 535, + "TP": 0, + "n_pred": 265, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8484848484848485, + "FN": 20, + "FP": 0, + "IoU": 0.7368421052631579, + "TN": 1524, + "TP": 56, + "n_pred": 56, + "n_ref": 76 + }, + "2": { + "Dice": 0.9559659090909091, + "FN": 41, + "FP": 21, + "IoU": 0.9156462585034013, + "TN": 865, + "TP": 673, + "n_pred": 694, + "n_ref": 714 + }, + "3": { + "Dice": 0.9696969696969697, + "FN": 6, + "FP": 15, + "IoU": 0.9411764705882353, + "TN": 1243, + "TP": 336, + "n_pred": 351, + "n_ref": 342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8919597989949749, + "FN": 33, + "FP": 53, + "IoU": 0.8049886621315193, + "TN": 359, + "TP": 355, + "n_pred": 408, + "n_ref": 388 + }, + "2": { + "Dice": 0.8888888888888888, + "FN": 25, + "FP": 11, + "IoU": 0.8, + "TN": 620, + "TP": 144, + "n_pred": 155, + "n_ref": 169 + }, + "3": { + "Dice": 0.8943089430894309, + "FN": 11, + "FP": 2, + "IoU": 0.8088235294117647, + "TN": 732, + "TP": 55, + "n_pred": 57, + "n_ref": 66 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5132075471698113, + "FN": 110, + "FP": 19, + "IoU": 0.34517766497461927, + "TN": 1403, + "TP": 68, + "n_pred": 87, + "n_ref": 178 + }, + "2": { + "Dice": 0.9330143540669856, + "FN": 17, + "FP": 11, + "IoU": 0.874439461883408, + "TN": 1377, + "TP": 195, + "n_pred": 206, + "n_ref": 212 + }, + "3": { + "Dice": 0.8666666666666667, + "FN": 0, + "FP": 16, + "IoU": 0.7647058823529411, + "TN": 1532, + "TP": 52, + "n_pred": 68, + "n_ref": 52 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.898876404494382, + "FN": 19, + "FP": 17, + "IoU": 0.8163265306122449, + "TN": 604, + "TP": 160, + "n_pred": 177, + "n_ref": 179 + }, + "3": { + "Dice": 0.9718875502008032, + "FN": 2, + "FP": 5, + "IoU": 0.9453125, + "TN": 672, + "TP": 121, + "n_pred": 126, + "n_ref": 123 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6632911392405063, + "FN": 3, + "FP": 130, + "IoU": 0.4962121212121212, + "TN": 1336, + "TP": 131, + "n_pred": 261, + "n_ref": 134 + }, + "2": { + "Dice": 0.9381362568519969, + "FN": 45, + "FP": 34, + "IoU": 0.883480825958702, + "TN": 922, + "TP": 599, + "n_pred": 633, + "n_ref": 644 + }, + "3": { + "Dice": 0.7717391304347826, + "FN": 1, + "FP": 41, + "IoU": 0.6283185840707964, + "TN": 1487, + "TP": 71, + "n_pred": 112, + "n_ref": 72 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 2, + "FP": 0, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 0, + "n_ref": 2 + }, + "2": { + "Dice": 0.8812785388127854, + "FN": 61, + "FP": 43, + "IoU": 0.7877551020408163, + "TN": 310, + "TP": 386, + "n_pred": 429, + "n_ref": 447 + }, + "3": { + "Dice": 0.71, + "FN": 43, + "FP": 15, + "IoU": 0.5503875968992248, + "TN": 671, + "TP": 71, + "n_pred": 86, + "n_ref": 114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 56, + "IoU": 0.0, + "TN": 744, + "TP": 0, + "n_pred": 56, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 48, + "IoU": 0.0, + "TN": 752, + "TP": 0, + "n_pred": 48, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7606318347509113, + "FN": 37, + "FP": 160, + "IoU": 0.6137254901960785, + "TN": 1090, + "TP": 313, + "n_pred": 473, + "n_ref": 350 + }, + "2": { + "Dice": 0.8787878787878788, + "FN": 1, + "FP": 7, + "IoU": 0.7837837837837838, + "TN": 1563, + "TP": 29, + "n_pred": 36, + "n_ref": 30 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9090909090909091, + "FN": 20, + "FP": 0, + "IoU": 0.8333333333333334, + "TN": 1480, + "TP": 100, + "n_pred": 100, + "n_ref": 120 + }, + "2": { + "Dice": 0.8764331210191083, + "FN": 84, + "FP": 13, + "IoU": 0.780045351473923, + "TN": 1159, + "TP": 344, + "n_pred": 357, + "n_ref": 428 + }, + "3": { + "Dice": 0.8489208633093526, + "FN": 0, + "FP": 84, + "IoU": 0.7375, + "TN": 1280, + "TP": 236, + "n_pred": 320, + "n_ref": 236 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.628099173553719, + "FN": 45, + "FP": 0, + "IoU": 0.4578313253012048, + "TN": 717, + "TP": 38, + "n_pred": 38, + "n_ref": 83 + }, + "2": { + "Dice": 0.8932038834951457, + "FN": 24, + "FP": 20, + "IoU": 0.8070175438596491, + "TN": 572, + "TP": 184, + "n_pred": 204, + "n_ref": 208 + }, + "3": { + "Dice": 0.9598470363288719, + "FN": 2, + "FP": 19, + "IoU": 0.9227941176470589, + "TN": 528, + "TP": 251, + "n_pred": 270, + "n_ref": 253 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 108, + "IoU": 0.0, + "TN": 692, + "TP": 0, + "n_pred": 108, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.875, + "FN": 50, + "FP": 48, + "IoU": 0.7777777777777778, + "TN": 1159, + "TP": 343, + "n_pred": 391, + "n_ref": 393 + }, + "2": { + "Dice": 0.5060240963855421, + "FN": 4, + "FP": 37, + "IoU": 0.3387096774193548, + "TN": 1538, + "TP": 21, + "n_pred": 58, + "n_ref": 25 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 1594, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.6576329092653229, + "FN": 18.930555555555554, + "FP": 25.25, + "IoU": 0.5875068951653252, + "TN": 911.4305555555555, + "TP": 144.38888888888889, + "n_pred": 169.63888888888889, + "n_ref": 163.31944444444443 + }, + "mean": { + "1": { + "Dice": 0.2924512247909561, + "FN": 23.125, + "FP": 13.75, + "IoU": 0.250734829312902, + "TN": 1018.5, + "TP": 44.625, + "n_pred": 58.375, + "n_ref": 67.75 + }, + "2": { + "Dice": 0.8157148673734826, + "FN": 23.333333333333332, + "FP": 40.083333333333336, + "IoU": 0.7027689339006629, + "TN": 878.0, + "TP": 158.58333333333334, + "n_pred": 198.66666666666666, + "n_ref": 181.91666666666666 + }, + "3": { + "Dice": 0.8647326356315301, + "FN": 10.333333333333334, + "FP": 21.916666666666668, + "IoU": 0.8090169222824106, + "TN": 837.7916666666666, + "TP": 229.95833333333334, + "n_pred": 251.875, + "n_ref": 240.29166666666666 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 9, + "IoU": 0.0, + "TN": 791, + "TP": 0, + "n_pred": 9, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.8588957055214724, + "FN": 0, + "FP": 69, + "IoU": 0.7526881720430108, + "TN": 521, + "TP": 210, + "n_pred": 279, + "n_ref": 210 + }, + "3": { + "Dice": 0.9695740365111561, + "FN": 15, + "FP": 0, + "IoU": 0.9409448818897638, + "TN": 546, + "TP": 239, + "n_pred": 239, + "n_ref": 254 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7603305785123967, + "FN": 78, + "FP": 9, + "IoU": 0.6133333333333333, + "TN": 1375, + "TP": 138, + "n_pred": 147, + "n_ref": 216 + }, + "2": { + "Dice": 0.8927613941018767, + "FN": 71, + "FP": 9, + "IoU": 0.8062953995157385, + "TN": 1187, + "TP": 333, + "n_pred": 342, + "n_ref": 404 + }, + "3": { + "Dice": 0.7777777777777778, + "FN": 4, + "FP": 12, + "IoU": 0.6363636363636364, + "TN": 1556, + "TP": 28, + "n_pred": 40, + "n_ref": 32 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5700483091787439, + "FN": 48, + "FP": 130, + "IoU": 0.39864864864864863, + "TN": 1304, + "TP": 118, + "n_pred": 248, + "n_ref": 166 + }, + "3": { + "Dice": 0.9439252336448598, + "FN": 0, + "FP": 48, + "IoU": 0.8938053097345132, + "TN": 1148, + "TP": 404, + "n_pred": 452, + "n_ref": 404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6240713224368499, + "FN": 247, + "FP": 6, + "IoU": 0.4535637149028078, + "TN": 337, + "TP": 210, + "n_pred": 216, + "n_ref": 457 + }, + "2": { + "Dice": 0.9305019305019305, + "FN": 14, + "FP": 22, + "IoU": 0.8700361010830325, + "TN": 523, + "TP": 241, + "n_pred": 263, + "n_ref": 255 + }, + "3": { + "Dice": 0.8571428571428571, + "FN": 22, + "FP": 0, + "IoU": 0.75, + "TN": 712, + "TP": 66, + "n_pred": 66, + "n_ref": 88 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9084423305588585, + "FN": 46, + "FP": 31, + "IoU": 0.8322440087145969, + "TN": 341, + "TP": 382, + "n_pred": 413, + "n_ref": 428 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6878306878306878, + "FN": 11, + "FP": 107, + "IoU": 0.5241935483870968, + "TN": 552, + "TP": 130, + "n_pred": 237, + "n_ref": 141 + }, + "3": { + "Dice": 0.8187134502923976, + "FN": 0, + "FP": 31, + "IoU": 0.693069306930693, + "TN": 699, + "TP": 70, + "n_pred": 101, + "n_ref": 70 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7245657568238213, + "FN": 7, + "FP": 104, + "IoU": 0.5680933852140078, + "TN": 543, + "TP": 146, + "n_pred": 250, + "n_ref": 153 + }, + "3": { + "Dice": 0.6135458167330677, + "FN": 16, + "FP": 275, + "IoU": 0.4425287356321839, + "TN": 278, + "TP": 231, + "n_pred": 506, + "n_ref": 247 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8773584905660378, + "FN": 44, + "FP": 8, + "IoU": 0.7815126050420168, + "TN": 562, + "TP": 186, + "n_pred": 194, + "n_ref": 230 + }, + "3": { + "Dice": 0.9904030710172744, + "FN": 8, + "FP": 2, + "IoU": 0.9809885931558935, + "TN": 274, + "TP": 516, + "n_pred": 518, + "n_ref": 524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 146, + "FP": 30, + "IoU": 0.0, + "TN": 2224, + "TP": 0, + "n_pred": 30, + "n_ref": 146 + }, + "2": { + "Dice": 0.5833333333333334, + "FN": 90, + "FP": 60, + "IoU": 0.4117647058823529, + "TN": 2145, + "TP": 105, + "n_pred": 165, + "n_ref": 195 + }, + "3": { + "Dice": 0.9560155239327296, + "FN": 58, + "FP": 10, + "IoU": 0.9157372986369269, + "TN": 1593, + "TP": 739, + "n_pred": 749, + "n_ref": 797 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 169, + "IoU": 0.0, + "TN": 1431, + "TP": 0, + "n_pred": 169, + "n_ref": 0 + }, + "2": { + "Dice": 0.8051948051948052, + "FN": 2, + "FP": 118, + "IoU": 0.6739130434782609, + "TN": 1232, + "TP": 248, + "n_pred": 366, + "n_ref": 250 + }, + "3": { + "Dice": 0.9692671394799054, + "FN": 11, + "FP": 2, + "IoU": 0.9403669724770642, + "TN": 1382, + "TP": 205, + "n_pred": 207, + "n_ref": 216 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8460176991150442, + "FN": 15, + "FP": 72, + "IoU": 0.7331288343558282, + "TN": 474, + "TP": 239, + "n_pred": 311, + "n_ref": 254 + }, + "3": { + "Dice": 0.9286675639300135, + "FN": 53, + "FP": 0, + "IoU": 0.8668341708542714, + "TN": 402, + "TP": 345, + "n_pred": 345, + "n_ref": 398 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 794, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": 0.8776978417266187, + "FN": 5, + "FP": 46, + "IoU": 0.782051282051282, + "TN": 566, + "TP": 183, + "n_pred": 229, + "n_ref": 188 + }, + "3": { + "Dice": 0.9613034623217923, + "FN": 14, + "FP": 5, + "IoU": 0.9254901960784314, + "TN": 545, + "TP": 236, + "n_pred": 241, + "n_ref": 250 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 27, + "IoU": 0.0, + "TN": 773, + "TP": 0, + "n_pred": 27, + "n_ref": 0 + }, + "2": { + "Dice": 0.7283018867924528, + "FN": 29, + "FP": 115, + "IoU": 0.5727002967359051, + "TN": 463, + "TP": 193, + "n_pred": 308, + "n_ref": 222 + }, + "3": { + "Dice": 0.9416498993963782, + "FN": 0, + "FP": 29, + "IoU": 0.8897338403041825, + "TN": 537, + "TP": 234, + "n_pred": 263, + "n_ref": 234 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 26, + "IoU": 0.0, + "TN": 774, + "TP": 0, + "n_pred": 26, + "n_ref": 0 + }, + "2": { + "Dice": 0.8676470588235294, + "FN": 84, + "FP": 6, + "IoU": 0.7662337662337663, + "TN": 415, + "TP": 295, + "n_pred": 301, + "n_ref": 379 + }, + "3": { + "Dice": 0.9509345794392523, + "FN": 6, + "FP": 36, + "IoU": 0.9064587973273942, + "TN": 351, + "TP": 407, + "n_pred": 443, + "n_ref": 413 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8547945205479452, + "FN": 38, + "FP": 15, + "IoU": 0.7464114832535885, + "TN": 1391, + "TP": 156, + "n_pred": 171, + "n_ref": 194 + }, + "3": { + "Dice": 0.9770114942528736, + "FN": 15, + "FP": 5, + "IoU": 0.9550561797752809, + "TN": 1155, + "TP": 425, + "n_pred": 430, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9235880398671097, + "FN": 15, + "FP": 8, + "IoU": 0.8580246913580247, + "TN": 1438, + "TP": 139, + "n_pred": 147, + "n_ref": 154 + }, + "3": { + "Dice": 0.9853054911059551, + "FN": 4, + "FP": 15, + "IoU": 0.9710365853658537, + "TN": 944, + "TP": 637, + "n_pred": 652, + "n_ref": 641 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.924119241192412, + "FN": 38, + "FP": 18, + "IoU": 0.8589420654911839, + "TN": 403, + "TP": 341, + "n_pred": 359, + "n_ref": 379 + }, + "2": { + "Dice": 0.9230769230769231, + "FN": 27, + "FP": 2, + "IoU": 0.8571428571428571, + "TN": 597, + "TP": 174, + "n_pred": 176, + "n_ref": 201 + }, + "3": { + "Dice": 0.9727891156462585, + "FN": 2, + "FP": 6, + "IoU": 0.9470198675496688, + "TN": 649, + "TP": 143, + "n_pred": 149, + "n_ref": 145 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient100_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.915538362346873, + "FN": 60, + "FP": 71, + "IoU": 0.8442330558858502, + "TN": 759, + "TP": 710, + "n_pred": 781, + "n_ref": 770 + }, + "3": { + "Dice": 0.9511609287429944, + "FN": 20, + "FP": 41, + "IoU": 0.9068702290076336, + "TN": 945, + "TP": 594, + "n_pred": 635, + "n_ref": 614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.7530687874443432, + "FN": 29.919999999999998, + "FP": 12.826666666666666, + "IoU": 0.6787629008837547, + "TN": 972.0533333333333, + "TP": 169.20000000000002, + "n_pred": 182.02666666666667, + "n_ref": 199.12 + }, + "mean": { + "1": { + "Dice": 0.5855124224558244, + "FN": 21.56, + "FP": 6.56, + "IoU": 0.5216415359933262, + "TN": 1023.6, + "TP": 132.28, + "n_pred": 138.84, + "n_ref": 153.84 + }, + "2": { + "Dice": 0.8355407876304067, + "FN": 49.76, + "FP": 22.48, + "IoU": 0.7411226016123934, + "TN": 907.36, + "TP": 204.4, + "n_pred": 226.88, + "n_ref": 254.16 + }, + "3": { + "Dice": 0.8381531522467985, + "FN": 18.44, + "FP": 9.44, + "IoU": 0.7735245650455445, + "TN": 985.2, + "TP": 170.92, + "n_pred": 180.36, + "n_ref": 189.36 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 14, + "IoU": 0.0, + "TN": 786, + "TP": 0, + "n_pred": 14, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.3804878048780488, + "FN": 98, + "FP": 29, + "IoU": 0.23493975903614459, + "TN": 634, + "TP": 39, + "n_pred": 68, + "n_ref": 137 + }, + "3": { + "Dice": 0.38596491228070173, + "FN": 140, + "FP": 0, + "IoU": 0.2391304347826087, + "TN": 616, + "TP": 44, + "n_pred": 44, + "n_ref": 184 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8467532467532467, + "FN": 7, + "FP": 52, + "IoU": 0.7342342342342343, + "TN": 578, + "TP": 163, + "n_pred": 215, + "n_ref": 170 + }, + "3": { + "Dice": 0.896551724137931, + "FN": 39, + "FP": 0, + "IoU": 0.8125, + "TN": 592, + "TP": 169, + "n_pred": 169, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.4513064133016627, + "FN": 231, + "FP": 0, + "IoU": 0.29141104294478526, + "TN": 474, + "TP": 95, + "n_pred": 95, + "n_ref": 326 + }, + "3": { + "Dice": 0.0, + "FN": 42, + "FP": 0, + "IoU": 0.0, + "TN": 758, + "TP": 0, + "n_pred": 0, + "n_ref": 42 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4878048780487805, + "FN": 42, + "FP": 0, + "IoU": 0.3225806451612903, + "TN": 738, + "TP": 20, + "n_pred": 20, + "n_ref": 62 + }, + "2": { + "Dice": 0.8881789137380192, + "FN": 17, + "FP": 18, + "IoU": 0.7988505747126436, + "TN": 626, + "TP": 139, + "n_pred": 157, + "n_ref": 156 + }, + "3": { + "Dice": 0.9810017271157168, + "FN": 14, + "FP": 8, + "IoU": 0.9627118644067797, + "TN": 210, + "TP": 568, + "n_pred": 576, + "n_ref": 582 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8416289592760181, + "FN": 103, + "FP": 2, + "IoU": 0.7265625, + "TN": 1216, + "TP": 279, + "n_pred": 281, + "n_ref": 382 + }, + "3": { + "Dice": 0.8571428571428571, + "FN": 2, + "FP": 2, + "IoU": 0.75, + "TN": 1584, + "TP": 12, + "n_pred": 14, + "n_ref": 14 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9015151515151515, + "FN": 52, + "FP": 0, + "IoU": 0.8206896551724138, + "TN": 1310, + "TP": 238, + "n_pred": 238, + "n_ref": 290 + }, + "3": { + "Dice": 0.9849677881173944, + "FN": 0, + "FP": 21, + "IoU": 0.9703808180535967, + "TN": 891, + "TP": 688, + "n_pred": 709, + "n_ref": 688 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8904593639575972, + "FN": 106, + "FP": 18, + "IoU": 0.802547770700637, + "TN": 172, + "TP": 504, + "n_pred": 522, + "n_ref": 610 + }, + "2": { + "Dice": 0.8514851485148515, + "FN": 18, + "FP": 42, + "IoU": 0.7413793103448276, + "TN": 568, + "TP": 172, + "n_pred": 214, + "n_ref": 190 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8188865398167724, + "FN": 173, + "FP": 84, + "IoU": 0.6933174224343676, + "TN": 762, + "TP": 581, + "n_pred": 665, + "n_ref": 754 + }, + "3": { + "Dice": 0.8888888888888888, + "FN": 84, + "FP": 11, + "IoU": 0.8, + "TN": 1125, + "TP": 380, + "n_pred": 391, + "n_ref": 464 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7544910179640718, + "FN": 2, + "FP": 80, + "IoU": 0.6057692307692307, + "TN": 1392, + "TP": 126, + "n_pred": 206, + "n_ref": 128 + }, + "2": { + "Dice": 0.7864133563615429, + "FN": 299, + "FP": 72, + "IoU": 0.6480075901328273, + "TN": 546, + "TP": 683, + "n_pred": 755, + "n_ref": 982 + }, + "3": { + "Dice": 0.8286384976525821, + "FN": 19, + "FP": 127, + "IoU": 0.7074148296593187, + "TN": 1101, + "TP": 353, + "n_pred": 480, + "n_ref": 372 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9294605809128631, + "FN": 63, + "FP": 5, + "IoU": 0.8682170542635659, + "TN": 1084, + "TP": 448, + "n_pred": 453, + "n_ref": 511 + }, + "2": { + "Dice": 0.9655172413793104, + "FN": 0, + "FP": 6, + "IoU": 0.9333333333333333, + "TN": 1510, + "TP": 84, + "n_pred": 90, + "n_ref": 84 + }, + "3": { + "Dice": 0.9957924263674615, + "FN": 6, + "FP": 0, + "IoU": 0.9916201117318436, + "TN": 884, + "TP": 710, + "n_pred": 710, + "n_ref": 716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.89, + "FN": 34, + "FP": 32, + "IoU": 0.8018018018018018, + "TN": 1267, + "TP": 267, + "n_pred": 299, + "n_ref": 301 + }, + "3": { + "Dice": 0.7922077922077922, + "FN": 32, + "FP": 0, + "IoU": 0.6559139784946236, + "TN": 1507, + "TP": 61, + "n_pred": 61, + "n_ref": 93 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9389243391066545, + "FN": 120, + "FP": 14, + "IoU": 0.8848797250859106, + "TN": 436, + "TP": 1030, + "n_pred": 1044, + "n_ref": 1150 + }, + "2": { + "Dice": 0.8545994065281899, + "FN": 4, + "FP": 45, + "IoU": 0.7461139896373057, + "TN": 1407, + "TP": 144, + "n_pred": 189, + "n_ref": 148 + }, + "3": { + "Dice": 0.9642857142857143, + "FN": 4, + "FP": 4, + "IoU": 0.9310344827586207, + "TN": 1484, + "TP": 108, + "n_pred": 112, + "n_ref": 112 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 8, + "FP": 1, + "IoU": 0.0, + "TN": 791, + "TP": 0, + "n_pred": 1, + "n_ref": 8 + }, + "2": { + "Dice": 0.9246987951807228, + "FN": 29, + "FP": 21, + "IoU": 0.8599439775910365, + "TN": 443, + "TP": 307, + "n_pred": 328, + "n_ref": 336 + }, + "3": { + "Dice": 0.9454545454545454, + "FN": 0, + "FP": 24, + "IoU": 0.896551724137931, + "TN": 568, + "TP": 208, + "n_pred": 232, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9432314410480349, + "FN": 18, + "FP": 8, + "IoU": 0.8925619834710744, + "TN": 1358, + "TP": 216, + "n_pred": 224, + "n_ref": 234 + }, + "3": { + "Dice": 0.9753424657534246, + "FN": 1, + "FP": 8, + "IoU": 0.9518716577540107, + "TN": 1413, + "TP": 178, + "n_pred": 186, + "n_ref": 179 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9460641399416909, + "FN": 43, + "FP": 31, + "IoU": 0.8976486860304288, + "TN": 877, + "TP": 649, + "n_pred": 680, + "n_ref": 692 + }, + "3": { + "Dice": 0.9470046082949308, + "FN": 27, + "FP": 19, + "IoU": 0.899343544857768, + "TN": 1143, + "TP": 411, + "n_pred": 430, + "n_ref": 438 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8217636022514071, + "FN": 73, + "FP": 22, + "IoU": 0.697452229299363, + "TN": 486, + "TP": 219, + "n_pred": 241, + "n_ref": 292 + }, + "3": { + "Dice": 0.8571428571428571, + "FN": 22, + "FP": 0, + "IoU": 0.75, + "TN": 712, + "TP": 66, + "n_pred": 66, + "n_ref": 88 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8893930799773114, + "FN": 189, + "FP": 6, + "IoU": 0.8008171603677222, + "TN": 621, + "TP": 784, + "n_pred": 790, + "n_ref": 973 + }, + "2": { + "Dice": 0.9458128078817734, + "FN": 22, + "FP": 11, + "IoU": 0.897196261682243, + "TN": 1279, + "TP": 288, + "n_pred": 299, + "n_ref": 310 + }, + "3": { + "Dice": 0.8888888888888888, + "FN": 2, + "FP": 9, + "IoU": 0.8, + "TN": 1545, + "TP": 44, + "n_pred": 53, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9645909645909646, + "FN": 9, + "FP": 20, + "IoU": 0.9316037735849056, + "TN": 1176, + "TP": 395, + "n_pred": 415, + "n_ref": 404 + }, + "2": { + "Dice": 0.929159802306425, + "FN": 23, + "FP": 20, + "IoU": 0.8676923076923077, + "TN": 1275, + "TP": 282, + "n_pred": 302, + "n_ref": 305 + }, + "3": { + "Dice": 0.950354609929078, + "FN": 4, + "FP": 3, + "IoU": 0.9054054054054054, + "TN": 1526, + "TP": 67, + "n_pred": 70, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 1594, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": 0.8877721943048577, + "FN": 0, + "FP": 67, + "IoU": 0.7981927710843374, + "TN": 1268, + "TP": 265, + "n_pred": 332, + "n_ref": 265 + }, + "3": { + "Dice": 0.9471264367816092, + "FN": 23, + "FP": 0, + "IoU": 0.8995633187772926, + "TN": 1371, + "TP": 206, + "n_pred": 206, + "n_ref": 229 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.7055861961814172, + "FN": 34.17333333333334, + "FP": 39.4, + "IoU": 0.6134180137058031, + "TN": 1003.7866666666667, + "TP": 138.64000000000001, + "n_pred": 178.04, + "n_ref": 172.8133333333333 + }, + "mean": { + "1": { + "Dice": 0.5490098953422203, + "FN": 33.52, + "FP": 74.04, + "IoU": 0.476435410173007, + "TN": 960.84, + "TP": 147.6, + "n_pred": 221.64, + "n_ref": 181.12 + }, + "2": { + "Dice": 0.7509180418822621, + "FN": 34.76, + "FP": 36.56, + "IoU": 0.6316575102267612, + "TN": 1008.04, + "TP": 136.64, + "n_pred": 173.2, + "n_ref": 171.4 + }, + "3": { + "Dice": 0.8168306513197692, + "FN": 34.24, + "FP": 7.6, + "IoU": 0.7321611207176412, + "TN": 1042.48, + "TP": 131.68, + "n_pred": 139.28, + "n_ref": 165.92 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7258687258687259, + "FN": 69, + "FP": 2, + "IoU": 0.5696969696969697, + "TN": 635, + "TP": 94, + "n_pred": 96, + "n_ref": 163 + }, + "2": { + "Dice": 0.9080459770114943, + "FN": 21, + "FP": 27, + "IoU": 0.8315789473684211, + "TN": 515, + "TP": 237, + "n_pred": 264, + "n_ref": 258 + }, + "3": { + "Dice": 0.8940092165898618, + "FN": 23, + "FP": 0, + "IoU": 0.8083333333333333, + "TN": 680, + "TP": 97, + "n_pred": 97, + "n_ref": 120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 152, + "FP": 0, + "IoU": 0.0, + "TN": 2248, + "TP": 0, + "n_pred": 0, + "n_ref": 152 + }, + "2": { + "Dice": 0.6121212121212121, + "FN": 201, + "FP": 55, + "IoU": 0.4410480349344978, + "TN": 1942, + "TP": 202, + "n_pred": 257, + "n_ref": 403 + }, + "3": { + "Dice": 0.8202764976958525, + "FN": 61, + "FP": 17, + "IoU": 0.6953125, + "TN": 2144, + "TP": 178, + "n_pred": 195, + "n_ref": 239 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9143407122232916, + "FN": 67, + "FP": 22, + "IoU": 0.8421985815602837, + "TN": 1036, + "TP": 475, + "n_pred": 497, + "n_ref": 542 + }, + "2": { + "Dice": 0.46153846153846156, + "FN": 51, + "FP": 110, + "IoU": 0.3, + "TN": 1370, + "TP": 69, + "n_pred": 179, + "n_ref": 120 + }, + "3": { + "Dice": 0.26666666666666666, + "FN": 110, + "FP": 0, + "IoU": 0.15384615384615385, + "TN": 1470, + "TP": 20, + "n_pred": 20, + "n_ref": 130 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.821689259645464, + "FN": 36, + "FP": 135, + "IoU": 0.6973451327433628, + "TN": 1035, + "TP": 394, + "n_pred": 529, + "n_ref": 430 + }, + "3": { + "Dice": 0.9296875, + "FN": 2, + "FP": 34, + "IoU": 0.8686131386861314, + "TN": 1326, + "TP": 238, + "n_pred": 272, + "n_ref": 240 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 265, + "IoU": 0.0, + "TN": 1335, + "TP": 0, + "n_pred": 265, + "n_ref": 0 + }, + "2": { + "Dice": 0.7839305103148752, + "FN": 101, + "FP": 98, + "IoU": 0.6446428571428572, + "TN": 1040, + "TP": 361, + "n_pred": 459, + "n_ref": 462 + }, + "3": { + "Dice": 0.9491525423728814, + "FN": 10, + "FP": 26, + "IoU": 0.9032258064516129, + "TN": 1228, + "TP": 336, + "n_pred": 362, + "n_ref": 346 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8771266540642723, + "FN": 0, + "FP": 65, + "IoU": 0.7811447811447811, + "TN": 503, + "TP": 232, + "n_pred": 297, + "n_ref": 232 + }, + "3": { + "Dice": 0.962486602357985, + "FN": 35, + "FP": 0, + "IoU": 0.9276859504132231, + "TN": 316, + "TP": 449, + "n_pred": 449, + "n_ref": 484 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8472727272727273, + "FN": 59, + "FP": 25, + "IoU": 0.7350157728706624, + "TN": 483, + "TP": 233, + "n_pred": 258, + "n_ref": 292 + }, + "3": { + "Dice": 0.9710144927536232, + "FN": 25, + "FP": 3, + "IoU": 0.9436619718309859, + "TN": 303, + "TP": 469, + "n_pred": 472, + "n_ref": 494 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7514910536779325, + "FN": 13, + "FP": 112, + "IoU": 0.6019108280254777, + "TN": 1286, + "TP": 189, + "n_pred": 301, + "n_ref": 202 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 304, + "IoU": 0.0, + "TN": 1296, + "TP": 0, + "n_pred": 304, + "n_ref": 0 + }, + "2": { + "Dice": 0.884985835694051, + "FN": 32, + "FP": 171, + "IoU": 0.7936991869918699, + "TN": 616, + "TP": 781, + "n_pred": 952, + "n_ref": 813 + }, + "3": { + "Dice": 0.7737478411053541, + "FN": 99, + "FP": 32, + "IoU": 0.6309859154929578, + "TN": 1245, + "TP": 224, + "n_pred": 256, + "n_ref": 323 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9129770992366413, + "FN": 27, + "FP": 30, + "IoU": 0.8398876404494382, + "TN": 444, + "TP": 299, + "n_pred": 329, + "n_ref": 326 + }, + "2": { + "Dice": 0.749379652605459, + "FN": 46, + "FP": 55, + "IoU": 0.5992063492063492, + "TN": 548, + "TP": 151, + "n_pred": 206, + "n_ref": 197 + }, + "3": { + "Dice": 0.7358490566037735, + "FN": 27, + "FP": 29, + "IoU": 0.582089552238806, + "TN": 666, + "TP": 78, + "n_pred": 107, + "n_ref": 105 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7592219986586184, + "FN": 119, + "FP": 240, + "IoU": 0.6118918918918919, + "TN": 675, + "TP": 566, + "n_pred": 806, + "n_ref": 685 + }, + "2": { + "Dice": 0.8125, + "FN": 4, + "FP": 2, + "IoU": 0.6842105263157895, + "TN": 1581, + "TP": 13, + "n_pred": 15, + "n_ref": 17 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 1598, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8955223880597015, + "FN": 40, + "FP": 9, + "IoU": 0.8108108108108109, + "TN": 1341, + "TP": 210, + "n_pred": 219, + "n_ref": 250 + }, + "3": { + "Dice": 0.9297820823244553, + "FN": 9, + "FP": 20, + "IoU": 0.8687782805429864, + "TN": 1379, + "TP": 192, + "n_pred": 212, + "n_ref": 201 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6549707602339181, + "FN": 18, + "FP": 100, + "IoU": 0.48695652173913045, + "TN": 570, + "TP": 112, + "n_pred": 212, + "n_ref": 130 + }, + "3": { + "Dice": 0.9627507163323782, + "FN": 8, + "FP": 18, + "IoU": 0.9281767955801105, + "TN": 438, + "TP": 336, + "n_pred": 354, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 317, + "IoU": 0.0, + "TN": 483, + "TP": 0, + "n_pred": 317, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9514031485284052, + "FN": 71, + "FP": 0, + "IoU": 0.9073107049608355, + "TN": 34, + "TP": 695, + "n_pred": 695, + "n_ref": 766 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5524079320113314, + "FN": 113, + "FP": 519, + "IoU": 0.3816046966731898, + "TN": 1378, + "TP": 390, + "n_pred": 909, + "n_ref": 503 + }, + "2": { + "Dice": 0.21132075471698114, + "FN": 209, + "FP": 0, + "IoU": 0.11814345991561181, + "TN": 2163, + "TP": 28, + "n_pred": 28, + "n_ref": 237 + }, + "3": { + "Dice": 0.4340425531914894, + "FN": 399, + "FP": 0, + "IoU": 0.27717391304347827, + "TN": 1848, + "TP": 153, + "n_pred": 153, + "n_ref": 552 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9517601043024772, + "FN": 8, + "FP": 29, + "IoU": 0.9079601990049752, + "TN": 398, + "TP": 365, + "n_pred": 394, + "n_ref": 373 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.875, + "FN": 2, + "FP": 0, + "IoU": 0.7777777777777778, + "TN": 791, + "TP": 7, + "n_pred": 7, + "n_ref": 9 + }, + "2": { + "Dice": 0.9178947368421052, + "FN": 16, + "FP": 23, + "IoU": 0.8482490272373541, + "TN": 543, + "TP": 218, + "n_pred": 241, + "n_ref": 234 + }, + "3": { + "Dice": 0.9751131221719457, + "FN": 11, + "FP": 11, + "IoU": 0.9514348785871964, + "TN": 347, + "TP": 431, + "n_pred": 442, + "n_ref": 442 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.44357976653696496, + "FN": 136, + "FP": 7, + "IoU": 0.285, + "TN": 600, + "TP": 57, + "n_pred": 64, + "n_ref": 193 + }, + "2": { + "Dice": 0.8254716981132075, + "FN": 35, + "FP": 39, + "IoU": 0.7028112449799196, + "TN": 551, + "TP": 175, + "n_pred": 214, + "n_ref": 210 + }, + "3": { + "Dice": 0.8310502283105022, + "FN": 37, + "FP": 0, + "IoU": 0.7109375, + "TN": 672, + "TP": 91, + "n_pred": 91, + "n_ref": 128 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9461077844311377, + "FN": 61, + "FP": 2, + "IoU": 0.8977272727272727, + "TN": 984, + "TP": 553, + "n_pred": 555, + "n_ref": 614 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2865811/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient089_frame10.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.7052454588463176, + "FN": 26.505888888888894, + "FP": 26.866666666666667, + "IoU": 0.6266115647751738, + "TN": 973.432111111111, + "TP": 142.79533333333333, + "n_pred": 169.66199999999998, + "n_ref": 169.3012222222222 + }, + "mean": { + "1": { + "Dice": 0.5114978303682396, + "FN": 32.21933333333333, + "FP": 31.711333333333336, + "IoU": 0.4445163434448001, + "TN": 1003.5753333333332, + "TP": 102.09400000000001, + "n_pred": 133.80533333333332, + "n_ref": 134.31333333333333 + }, + "2": { + "Dice": 0.785895376385756, + "FN": 31.371666666666663, + "FP": 29.297666666666668, + "IoU": 0.6851210651872062, + "TN": 952.1063333333334, + "TP": 156.82433333333333, + "n_pred": 186.12199999999999, + "n_ref": 188.19599999999997 + }, + "3": { + "Dice": 0.818343169784957, + "FN": 15.926666666666666, + "FP": 19.591, + "IoU": 0.750197285693515, + "TN": 964.6146666666667, + "TP": 169.46766666666667, + "n_pred": 189.05866666666665, + "n_ref": 185.39433333333332 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_002/summary.json b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_002/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..b7cc96a6c730f338ae0645768af786772adc008a --- /dev/null +++ b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_002/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8191030145542312, + "FN": 1077.5533333333333, + "FP": 2317.0400000000004, + "IoU": 0.7130261485379338, + "TN": 841917.4866666667, + "TP": 9116.56, + "n_pred": 11433.6, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.7335647474228775, + "FN": 1474.16, + "FP": 3467.7, + "IoU": 0.598536064430952, + "TN": 841106.88, + "TP": 8379.9, + "n_pred": 11847.6, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8315088767810679, + "FN": 1281.84, + "FP": 2093.9, + "IoU": 0.7204293913339622, + "TN": 842279.24, + "TP": 8773.66, + "n_pred": 10867.56, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.892235419458748, + "FN": 476.66, + "FP": 1389.52, + "IoU": 0.8201129898488871, + "TN": 842366.34, + "TP": 10196.12, + "n_pred": 11585.64, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7904879364834657, + "FN": 1191, + "FP": 4245, + "IoU": 0.653559365241221, + "TN": 1090229, + "TP": 10255, + "n_pred": 14500, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8532922866427227, + "FN": 983, + "FP": 3306, + "IoU": 0.7441236129340174, + "TN": 1089158, + "TP": 12473, + "n_pred": 15779, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9408003217373818, + "FN": 815, + "FP": 2129, + "IoU": 0.8882180962144511, + "TN": 1079583, + "TP": 23393, + "n_pred": 25522, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5932454086034759, + "FN": 65, + "FP": 6535, + "IoU": 0.42171208271269606, + "TN": 1094507, + "TP": 4813, + "n_pred": 11348, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8826183706267771, + "FN": 1701, + "FP": 2097, + "IoU": 0.7898987663882281, + "TN": 1087843, + "TP": 14279, + "n_pred": 16376, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9258101490048973, + "FN": 712, + "FP": 2136, + "IoU": 0.8618682704433019, + "TN": 1085302, + "TP": 17770, + "n_pred": 19906, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.704631313837974, + "FN": 1316, + "FP": 5017, + "IoU": 0.5439619788291208, + "TN": 895553, + "TP": 7554, + "n_pred": 12571, + "n_ref": 8870 + }, + "2": { + "Dice": 0.9021301731457895, + "FN": 1568, + "FP": 1083, + "IoU": 0.8217095971484296, + "TN": 894571, + "TP": 12218, + "n_pred": 13301, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9761921516196373, + "FN": 603, + "FP": 412, + "IoU": 0.953491568914956, + "TN": 887616, + "TP": 20809, + "n_pred": 21221, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5912440398786303, + "FN": 1522, + "FP": 6022, + "IoU": 0.4196923076923077, + "TN": 896440, + "TP": 5456, + "n_pred": 11478, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8937868795557098, + "FN": 1449, + "FP": 1611, + "IoU": 0.8079698776278632, + "TN": 893505, + "TP": 12875, + "n_pred": 14486, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9715165096249899, + "FN": 642, + "FP": 413, + "IoU": 0.944610699847745, + "TN": 890393, + "TP": 17992, + "n_pred": 18405, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8304348765365421, + "FN": 4958, + "FP": 2891, + "IoU": 0.7100373120543796, + "TN": 1398691, + "TP": 19220, + "n_pred": 22111, + "n_ref": 24178 + }, + "2": { + "Dice": 0.7522043675319324, + "FN": 1392, + "FP": 7629, + "IoU": 0.6028265750891559, + "TN": 1403047, + "TP": 13692, + "n_pred": 21321, + "n_ref": 15084 + }, + "3": { + "Dice": 0.913664527139836, + "FN": 650, + "FP": 4004, + "IoU": 0.841051912568306, + "TN": 1396480, + "TP": 24626, + "n_pred": 28630, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8206923785704884, + "FN": 1963, + "FP": 4848, + "IoU": 0.695910349138316, + "TN": 1403362, + "TP": 15587, + "n_pred": 20435, + "n_ref": 17550 + }, + "2": { + "Dice": 0.7494148979097732, + "FN": 1139, + "FP": 8176, + "IoU": 0.5992514197212184, + "TN": 1402516, + "TP": 13929, + "n_pred": 22105, + "n_ref": 15068 + }, + "3": { + "Dice": 0.8903719378204606, + "FN": 820, + "FP": 4568, + "IoU": 0.8024057503300572, + "TN": 1398492, + "TP": 21880, + "n_pred": 26448, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7521367521367521, + "FN": 3318, + "FP": 597, + "IoU": 0.6027397260273972, + "TN": 752193, + "TP": 5940, + "n_pred": 6537, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8671255188357064, + "FN": 1158, + "FP": 1371, + "IoU": 0.7654206474353028, + "TN": 751267, + "TP": 8252, + "n_pred": 9623, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9673087229280287, + "FN": 674, + "FP": 363, + "IoU": 0.9366872214420905, + "TN": 745669, + "TP": 15342, + "n_pred": 15705, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7055718475073314, + "FN": 1309, + "FP": 1703, + "IoU": 0.5450838241957409, + "TN": 755427, + "TP": 3609, + "n_pred": 5312, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8421537894154527, + "FN": 2104, + "FP": 1320, + "IoU": 0.7273451186494665, + "TN": 749490, + "TP": 9134, + "n_pred": 10454, + "n_ref": 11238 + }, + "3": { + "Dice": 0.933241212539943, + "FN": 1106, + "FP": 440, + "IoU": 0.8748380829015544, + "TN": 749696, + "TP": 10806, + "n_pred": 11246, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7853847113106373, + "FN": 4397, + "FP": 766, + "IoU": 0.6466119096509241, + "TN": 1063662, + "TP": 9447, + "n_pred": 10213, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8658413218363119, + "FN": 883, + "FP": 1902, + "IoU": 0.7634216785592932, + "TN": 1066500, + "TP": 8987, + "n_pred": 10889, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9539200698842542, + "FN": 932, + "FP": 756, + "IoU": 0.9118997912317328, + "TN": 1059112, + "TP": 17472, + "n_pred": 18228, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.813003355704698, + "FN": 3605, + "FP": 853, + "IoU": 0.6849247296628737, + "TN": 1064123, + "TP": 9691, + "n_pred": 10544, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8591866114810149, + "FN": 1251, + "FP": 1879, + "IoU": 0.7531351052922155, + "TN": 1065593, + "TP": 9549, + "n_pred": 11428, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9264012997562957, + "FN": 971, + "FP": 1294, + "IoU": 0.8628934624697336, + "TN": 1061752, + "TP": 14255, + "n_pred": 15549, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7129652760429678, + "FN": 1997, + "FP": 3748, + "IoU": 0.5539596273291926, + "TN": 1093040, + "TP": 7135, + "n_pred": 10883, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8383233532934131, + "FN": 912, + "FP": 3165, + "IoU": 0.7216494845360825, + "TN": 1091273, + "TP": 10570, + "n_pred": 13735, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8929653315382027, + "FN": 884, + "FP": 1660, + "IoU": 0.8066281544542414, + "TN": 1092764, + "TP": 10612, + "n_pred": 12272, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4801014436207569, + "FN": 591, + "FP": 4739, + "IoU": 0.315877294313952, + "TN": 1098129, + "TP": 2461, + "n_pred": 7200, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8312072732398337, + "FN": 558, + "FP": 4232, + "IoU": 0.7111673902556681, + "TN": 1089336, + "TP": 11794, + "n_pred": 16026, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7410377931704946, + "FN": 231, + "FP": 1900, + "IoU": 0.5886100386100386, + "TN": 1100740, + "TP": 3049, + "n_pred": 4949, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8548395485515161, + "FN": 946, + "FP": 1845, + "IoU": 0.7464801526024162, + "TN": 1135871, + "TP": 8218, + "n_pred": 10063, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8981658434886203, + "FN": 1322, + "FP": 2781, + "IoU": 0.815155201153309, + "TN": 1124683, + "TP": 18094, + "n_pred": 20875, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9157116758013619, + "FN": 903, + "FP": 1127, + "IoU": 0.8445278394730795, + "TN": 1133823, + "TP": 11027, + "n_pred": 12154, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.40127313450430274, + "FN": 764, + "FP": 4315, + "IoU": 0.2509954284028904, + "TN": 1140099, + "TP": 1702, + "n_pred": 6017, + "n_ref": 2466 + }, + "2": { + "Dice": 0.5819240427565057, + "FN": 11343, + "FP": 7470, + "IoU": 0.41036168745690466, + "TN": 1114974, + "TP": 13093, + "n_pred": 20563, + "n_ref": 24436 + }, + "3": { + "Dice": 0.33822450476889215, + "FN": 411, + "FP": 8609, + "IoU": 0.20353200883002207, + "TN": 1135555, + "TP": 2305, + "n_pred": 10914, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9209674672117186, + "FN": 1032, + "FP": 824, + "IoU": 0.8535122336227309, + "TN": 788130, + "TP": 10814, + "n_pred": 11638, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8752560892328705, + "FN": 944, + "FP": 1248, + "IoU": 0.7781825541388383, + "TN": 790918, + "TP": 7690, + "n_pred": 8938, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9587768303440165, + "FN": 501, + "FP": 200, + "IoU": 0.9208178018750706, + "TN": 791947, + "TP": 8152, + "n_pred": 8352, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.478656208787395, + "FN": 491, + "FP": 7020, + "IoU": 0.3146272470115887, + "TN": 789841, + "TP": 3448, + "n_pred": 10468, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9040070102764279, + "FN": 1304, + "FP": 1106, + "IoU": 0.8248291902892863, + "TN": 787042, + "TP": 11348, + "n_pred": 12454, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8973930481283422, + "FN": 161, + "FP": 453, + "IoU": 0.8138829948469233, + "TN": 797501, + "TP": 2685, + "n_pred": 3138, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.88291565615737, + "FN": 1086, + "FP": 2390, + "IoU": 0.7903751055361236, + "TN": 1331258, + "TP": 13106, + "n_pred": 15496, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8785400785400785, + "FN": 1098, + "FP": 1531, + "IoU": 0.7833896350004119, + "TN": 1335703, + "TP": 9508, + "n_pred": 11039, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9724627189807442, + "FN": 536, + "FP": 415, + "IoU": 0.9464013977343178, + "TN": 1330097, + "TP": 16792, + "n_pred": 17207, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5960653920753671, + "FN": 490, + "FP": 6799, + "IoU": 0.42456777453224914, + "TN": 1335173, + "TP": 5378, + "n_pred": 12177, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8785667963683528, + "FN": 1276, + "FP": 1720, + "IoU": 0.7834321237530721, + "TN": 1334006, + "TP": 10838, + "n_pred": 12558, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9509932652801898, + "FN": 392, + "FP": 765, + "IoU": 0.9065654526366793, + "TN": 1335457, + "TP": 11226, + "n_pred": 11991, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8393744519146449, + "FN": 976, + "FP": 3420, + "IoU": 0.7232086638962347, + "TN": 836086, + "TP": 11486, + "n_pred": 14906, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8519171663223661, + "FN": 994, + "FP": 1945, + "IoU": 0.7420345826384622, + "TN": 840575, + "TP": 8454, + "n_pred": 10399, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9659759248062442, + "FN": 914, + "FP": 324, + "IoU": 0.9341909419519455, + "TN": 833156, + "TP": 17574, + "n_pred": 17898, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7680356497651452, + "FN": 561, + "FP": 3291, + "IoU": 0.6234235995698504, + "TN": 841739, + "TP": 6377, + "n_pred": 9668, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8831340133661625, + "FN": 1249, + "FP": 1409, + "IoU": 0.7907251397527754, + "TN": 839267, + "TP": 10043, + "n_pred": 11452, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9535089405883483, + "FN": 598, + "FP": 611, + "IoU": 0.9111486734768869, + "TN": 838361, + "TP": 12398, + "n_pred": 13009, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6888888888888889, + "FN": 1826, + "FP": 1814, + "IoU": 0.5254237288135594, + "TN": 844298, + "TP": 4030, + "n_pred": 5844, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8746683455502091, + "FN": 995, + "FP": 1792, + "IoU": 0.7772538363171355, + "TN": 839456, + "TP": 9725, + "n_pred": 11517, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9377723970944309, + "FN": 1337, + "FP": 205, + "IoU": 0.8828356507864145, + "TN": 838807, + "TP": 11619, + "n_pred": 11824, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49229059591609947, + "FN": 332, + "FP": 3323, + "IoU": 0.32651557029666484, + "TN": 846541, + "TP": 1772, + "n_pred": 5095, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8867569895841491, + "FN": 1263, + "FP": 1629, + "IoU": 0.7965529370383397, + "TN": 837753, + "TP": 11323, + "n_pred": 12952, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9326407506702413, + "FN": 397, + "FP": 809, + "IoU": 0.8737833594976452, + "TN": 842413, + "TP": 8349, + "n_pred": 9158, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7204524469067405, + "FN": 3725, + "FP": 3541, + "IoU": 0.5630524986469421, + "TN": 780411, + "TP": 9363, + "n_pred": 12904, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7679792746113989, + "FN": 1443, + "FP": 3035, + "IoU": 0.623349314492388, + "TN": 785151, + "TP": 7411, + "n_pred": 10446, + "n_ref": 8854 + }, + "3": { + "Dice": 0.8234085561851742, + "FN": 1034, + "FP": 4295, + "IoU": 0.6998253816256408, + "TN": 779287, + "TP": 12424, + "n_pred": 16719, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5874068362888718, + "FN": 1954, + "FP": 6073, + "IoU": 0.41583581980932977, + "TN": 783299, + "TP": 5714, + "n_pred": 11787, + "n_ref": 7668 + }, + "2": { + "Dice": 0.7908020190689848, + "FN": 1162, + "FP": 3314, + "IoU": 0.6539888682745826, + "TN": 784104, + "TP": 8460, + "n_pred": 11774, + "n_ref": 9622 + }, + "3": { + "Dice": 0.7235388414713401, + "FN": 682, + "FP": 5699, + "IoU": 0.5668318511981536, + "TN": 782309, + "TP": 8350, + "n_pred": 14049, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8547199108173746, + "FN": 1734, + "FP": 1915, + "IoU": 0.7462977125773482, + "TN": 882287, + "TP": 10734, + "n_pred": 12649, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8238941328891357, + "FN": 1435, + "FP": 2371, + "IoU": 0.7005271854591234, + "TN": 883961, + "TP": 8903, + "n_pred": 11274, + "n_ref": 10338 + }, + "3": { + "Dice": 0.939580474416781, + "FN": 270, + "FP": 1271, + "IoU": 0.8860459957110108, + "TN": 883147, + "TP": 11982, + "n_pred": 13253, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6762875678538329, + "FN": 1248, + "FP": 3642, + "IoU": 0.5109021804360873, + "TN": 886672, + "TP": 5108, + "n_pred": 8750, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8633170812329559, + "FN": 1071, + "FP": 2237, + "IoU": 0.7595056343147947, + "TN": 882915, + "TP": 10447, + "n_pred": 12684, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9308679907823988, + "FN": 343, + "FP": 917, + "IoU": 0.8706763830442369, + "TN": 886927, + "TP": 8483, + "n_pred": 9400, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9457433121866821, + "FN": 561, + "FP": 662, + "IoU": 0.8970712001346575, + "TN": 750166, + "TP": 10659, + "n_pred": 11321, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9284925322960188, + "FN": 745, + "FP": 744, + "IoU": 0.8665292219433489, + "TN": 750892, + "TP": 9667, + "n_pred": 10411, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9759757228357077, + "FN": 174, + "FP": 396, + "IoU": 0.9530786960816595, + "TN": 749900, + "TP": 11578, + "n_pred": 11974, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6873451590526212, + "FN": 324, + "FP": 2831, + "IoU": 0.523629775026423, + "TN": 755425, + "TP": 3468, + "n_pred": 6299, + "n_ref": 3792 + }, + "2": { + "Dice": 0.9214364923654355, + "FN": 830, + "FP": 1012, + "IoU": 0.8543182537171781, + "TN": 749404, + "TP": 10802, + "n_pred": 11814, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9393764434180139, + "FN": 326, + "FP": 514, + "IoU": 0.8856831790963527, + "TN": 754700, + "TP": 6508, + "n_pred": 7022, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7287276859699796, + "FN": 247, + "FP": 5482, + "IoU": 0.5732270560190703, + "TN": 981904, + "TP": 7695, + "n_pred": 13177, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8457754010695188, + "FN": 840, + "FP": 2044, + "IoU": 0.7327650111193477, + "TN": 984536, + "TP": 7908, + "n_pred": 9952, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9728831662018632, + "FN": 150, + "FP": 764, + "IoU": 0.9471981513575968, + "TN": 978018, + "TP": 16396, + "n_pred": 17160, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.46008224067033904, + "FN": 277, + "FP": 6682, + "IoU": 0.2987706569931479, + "TN": 985404, + "TP": 2965, + "n_pred": 9647, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8100079009744535, + "FN": 645, + "FP": 2962, + "IoU": 0.6806834277620396, + "TN": 984032, + "TP": 7689, + "n_pred": 10651, + "n_ref": 8334 + }, + "3": { + "Dice": 0.910248582642826, + "FN": 178, + "FP": 1880, + "IoU": 0.8352809348487273, + "TN": 982834, + "TP": 10436, + "n_pred": 12316, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.913372029350564, + "FN": 1814, + "FP": 559, + "IoU": 0.840556339447692, + "TN": 743133, + "TP": 12510, + "n_pred": 13069, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8960137654143964, + "FN": 1001, + "FP": 812, + "IoU": 0.811616791354946, + "TN": 748392, + "TP": 7811, + "n_pred": 8623, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9745231308923482, + "FN": 190, + "FP": 391, + "IoU": 0.9503121525699136, + "TN": 746323, + "TP": 11112, + "n_pred": 11503, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6959789552799699, + "FN": 606, + "FP": 3439, + "IoU": 0.5337175792507205, + "TN": 749341, + "TP": 4630, + "n_pred": 8069, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8963361516781962, + "FN": 586, + "FP": 1437, + "IoU": 0.8121459745565976, + "TN": 747247, + "TP": 8746, + "n_pred": 10183, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8163561076604555, + "FN": 249, + "FP": 1525, + "IoU": 0.6896973937379745, + "TN": 752299, + "TP": 3943, + "n_pred": 5468, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7086963089782969, + "FN": 909, + "FP": 4876, + "IoU": 0.5488223366089534, + "TN": 626154, + "TP": 7037, + "n_pred": 11913, + "n_ref": 7946 + }, + "2": { + "Dice": 0.819737830842448, + "FN": 457, + "FP": 1702, + "IoU": 0.694538766270515, + "TN": 631908, + "TP": 4909, + "n_pred": 6611, + "n_ref": 5366 + }, + "3": { + "Dice": 0.8957990927618171, + "FN": 521, + "FP": 1064, + "IoU": 0.8112645868063825, + "TN": 630578, + "TP": 6813, + "n_pred": 7877, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.370360724052611, + "FN": 176, + "FP": 9494, + "IoU": 0.2272654626817964, + "TN": 626462, + "TP": 2844, + "n_pred": 12338, + "n_ref": 3020 + }, + "2": { + "Dice": 0.8675074925074925, + "FN": 405, + "FP": 1717, + "IoU": 0.7660160987981034, + "TN": 629907, + "TP": 6947, + "n_pred": 8664, + "n_ref": 7352 + }, + "3": { + "Dice": 0.5687613843351548, + "FN": 258, + "FP": 3530, + "IoU": 0.39739102768055995, + "TN": 632690, + "TP": 2498, + "n_pred": 6028, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8106397643962654, + "FN": 2503, + "FP": 3541, + "IoU": 0.6815763131552606, + "TN": 964059, + "TP": 12937, + "n_pred": 16478, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8663935639899314, + "FN": 1119, + "FP": 1588, + "IoU": 0.7642807384186695, + "TN": 971556, + "TP": 8777, + "n_pred": 10365, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9638304946983411, + "FN": 174, + "FP": 805, + "IoU": 0.93018612279826, + "TN": 969017, + "TP": 13044, + "n_pred": 13849, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7290695506246504, + "FN": 323, + "FP": 4036, + "IoU": 0.573650234741784, + "TN": 972816, + "TP": 5865, + "n_pred": 9901, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8938747145835402, + "FN": 952, + "FP": 1186, + "IoU": 0.8081134446239454, + "TN": 971898, + "TP": 9004, + "n_pred": 10190, + "n_ref": 9956 + }, + "3": { + "Dice": 0.8918258212375859, + "FN": 153, + "FP": 1263, + "IoU": 0.8047704398180063, + "TN": 975787, + "TP": 5837, + "n_pred": 7100, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9156529544680719, + "FN": 1389, + "FP": 1336, + "IoU": 0.8444279515871204, + "TN": 1031060, + "TP": 14791, + "n_pred": 16127, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8650065530799476, + "FN": 788, + "FP": 1684, + "IoU": 0.7621247113163973, + "TN": 1038184, + "TP": 7920, + "n_pred": 9604, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9659305739913921, + "FN": 253, + "FP": 594, + "IoU": 0.934106114828069, + "TN": 1035722, + "TP": 12007, + "n_pred": 12601, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.61453047579249, + "FN": 283, + "FP": 6174, + "IoU": 0.44355394691485694, + "TN": 1036972, + "TP": 5147, + "n_pred": 11321, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8464688290775247, + "FN": 1123, + "FP": 2214, + "IoU": 0.733806636885769, + "TN": 1036040, + "TP": 9199, + "n_pred": 11413, + "n_ref": 10322 + }, + "3": { + "Dice": 0.7761049834956928, + "FN": 260, + "FP": 2521, + "IoU": 0.6341270885409814, + "TN": 1040975, + "TP": 4820, + "n_pred": 7341, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7798408488063661, + "FN": 1901, + "FP": 3328, + "IoU": 0.6391304347826087, + "TN": 474726, + "TP": 9261, + "n_pred": 12589, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7504261847937266, + "FN": 516, + "FP": 948, + "IoU": 0.6005457025920873, + "TN": 485551, + "TP": 2201, + "n_pred": 3149, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9405141278946251, + "FN": 224, + "FP": 336, + "IoU": 0.8877080409063566, + "TN": 484229, + "TP": 4427, + "n_pred": 4763, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6899180700955849, + "FN": 588, + "FP": 4862, + "IoU": 0.5266220793885174, + "TN": 477703, + "TP": 6063, + "n_pred": 10925, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8317574666066336, + "FN": 589, + "FP": 532, + "IoU": 0.7119732785200411, + "TN": 485324, + "TP": 2771, + "n_pred": 3303, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8409703504043127, + "FN": 74, + "FP": 575, + "IoU": 0.7255813953488373, + "TN": 486851, + "TP": 1716, + "n_pred": 2291, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8907627689249414, + "FN": 1985, + "FP": 1422, + "IoU": 0.8030408139669326, + "TN": 463182, + "TP": 13891, + "n_pred": 15313, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7783251231527094, + "FN": 727, + "FP": 1433, + "IoU": 0.6370967741935484, + "TN": 474528, + "TP": 3792, + "n_pred": 5225, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9394925178919974, + "FN": 462, + "FP": 375, + "IoU": 0.8858895705521472, + "TN": 473145, + "TP": 6498, + "n_pred": 6873, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8909481487721663, + "FN": 1035, + "FP": 1554, + "IoU": 0.8033421952145842, + "TN": 467315, + "TP": 10576, + "n_pred": 12130, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8381481481481482, + "FN": 1136, + "FP": 612, + "IoU": 0.7213898629263628, + "TN": 474206, + "TP": 4526, + "n_pred": 5138, + "n_ref": 5662 + }, + "3": { + "Dice": 0.871161657189277, + "FN": 125, + "FP": 668, + "IoU": 0.7717328727691422, + "TN": 477006, + "TP": 2681, + "n_pred": 3349, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8297152290548906, + "FN": 5594, + "FP": 595, + "IoU": 0.7089857525744111, + "TN": 623373, + "TP": 15078, + "n_pred": 15673, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8325652841781874, + "FN": 1478, + "FP": 1574, + "IoU": 0.7131578947368421, + "TN": 634000, + "TP": 7588, + "n_pred": 9162, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9591124499467323, + "FN": 944, + "FP": 169, + "IoU": 0.921437142655467, + "TN": 630473, + "TP": 13054, + "n_pred": 13223, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8677119910996767, + "FN": 2853, + "FP": 952, + "IoU": 0.7663350528125767, + "TN": 628356, + "TP": 12479, + "n_pred": 13431, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8912343167175314, + "FN": 1653, + "FP": 913, + "IoU": 0.8038076305527946, + "TN": 631561, + "TP": 10513, + "n_pred": 11426, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9393258426966292, + "FN": 247, + "FP": 698, + "IoU": 0.885593220338983, + "TN": 636380, + "TP": 7315, + "n_pred": 8013, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8738251081466718, + "FN": 2761, + "FP": 2810, + "IoU": 0.7759230954870887, + "TN": 539618, + "TP": 19291, + "n_pred": 22101, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7797418935039584, + "FN": 874, + "FP": 1157, + "IoU": 0.6389975115535016, + "TN": 558854, + "TP": 3595, + "n_pred": 4752, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9523566228126198, + "FN": 441, + "FP": 305, + "IoU": 0.9090465740063399, + "TN": 556278, + "TP": 7456, + "n_pred": 7761, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6543732025038065, + "FN": 696, + "FP": 7476, + "IoU": 0.48629620316821726, + "TN": 548572, + "TP": 7736, + "n_pred": 15212, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8360342224458983, + "FN": 710, + "FP": 919, + "IoU": 0.7182635766170875, + "TN": 558698, + "TP": 4153, + "n_pred": 5072, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8800760559554529, + "FN": 212, + "FP": 671, + "IoU": 0.7858355566335192, + "TN": 560357, + "TP": 3240, + "n_pred": 3911, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7905669599217986, + "FN": 1105, + "FP": 2323, + "IoU": 0.6536674075570822, + "TN": 408982, + "TP": 6470, + "n_pred": 8793, + "n_ref": 7575 + }, + "2": { + "Dice": 0.49597982027431814, + "FN": 1283, + "FP": 1914, + "IoU": 0.329769392033543, + "TN": 414110, + "TP": 1573, + "n_pred": 3487, + "n_ref": 2856 + }, + "3": { + "Dice": 0.7950626959247649, + "FN": 141, + "FP": 1951, + "IoU": 0.6598373983739837, + "TN": 412730, + "TP": 4058, + "n_pred": 6009, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6773851301722027, + "FN": 587, + "FP": 3366, + "IoU": 0.5121559916080464, + "TN": 410777, + "TP": 4150, + "n_pred": 7516, + "n_ref": 4737 + }, + "2": { + "Dice": 0.4714262050687428, + "FN": 1570, + "FP": 1621, + "IoU": 0.3084091894234937, + "TN": 414266, + "TP": 1423, + "n_pred": 3044, + "n_ref": 2993 + }, + "3": { + "Dice": 0.7758334868299871, + "FN": 277, + "FP": 940, + "IoU": 0.6337646704784833, + "TN": 415557, + "TP": 2106, + "n_pred": 3046, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9256802298769023, + "FN": 519, + "FP": 1576, + "IoU": 0.861643111874257, + "TN": 481368, + "TP": 13047, + "n_pred": 14623, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8713076077823023, + "FN": 932, + "FP": 1059, + "IoU": 0.7719619745733592, + "TN": 487779, + "TP": 6740, + "n_pred": 7799, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9491759102588205, + "FN": 199, + "FP": 612, + "IoU": 0.9032681297709924, + "TN": 488126, + "TP": 7573, + "n_pred": 8185, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8852374270733329, + "FN": 1275, + "FP": 1833, + "IoU": 0.7941040079496522, + "TN": 481415, + "TP": 11987, + "n_pred": 13820, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8452326116996776, + "FN": 1136, + "FP": 1552, + "IoU": 0.7319505384922218, + "TN": 486482, + "TP": 7340, + "n_pred": 8892, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8429878048780488, + "FN": 82, + "FP": 1154, + "IoU": 0.7285902503293807, + "TN": 491956, + "TP": 3318, + "n_pred": 4472, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_002/summary_cross_val.json b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_002/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..54e69e144a2cf9f9ee17a6c60bfcbd0b89b3fdd3 --- /dev/null +++ b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_002/summary_cross_val.json @@ -0,0 +1,5208 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8160206027653588, + "FN": 21.5, + "FP": 36.654761904761905, + "IoU": 0.7338813394220342, + "TN": 1237.9404761904764, + "TP": 218.19047619047618, + "n_pred": 254.84523809523807, + "n_ref": 239.69047619047618 + }, + "mean": { + "1": { + "Dice": 0.7411817415044872, + "FN": 8.642857142857142, + "FP": 30.321428571428573, + "IoU": 0.6681900520777607, + "TN": 1360.607142857143, + "TP": 114.71428571428571, + "n_pred": 145.03571428571428, + "n_ref": 123.35714285714286 + }, + "2": { + "Dice": 0.8011349009586725, + "FN": 37.357142857142854, + "FP": 49.392857142857146, + "IoU": 0.6961863404511432, + "TN": 1172.5, + "TP": 255.03571428571428, + "n_pred": 304.42857142857144, + "n_ref": 292.39285714285717 + }, + "3": { + "Dice": 0.9057451658329166, + "FN": 18.5, + "FP": 30.25, + "IoU": 0.8372676257371983, + "TN": 1180.7142857142858, + "TP": 284.82142857142856, + "n_pred": 315.07142857142856, + "n_ref": 303.32142857142856 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.75, + "FN": 25, + "FP": 1, + "IoU": 0.6, + "TN": 735, + "TP": 39, + "n_pred": 40, + "n_ref": 64 + }, + "2": { + "Dice": 0.9157667386609071, + "FN": 17, + "FP": 22, + "IoU": 0.8446215139442231, + "TN": 549, + "TP": 212, + "n_pred": 234, + "n_ref": 229 + }, + "3": { + "Dice": 0.9695817490494296, + "FN": 13, + "FP": 3, + "IoU": 0.940959409594096, + "TN": 529, + "TP": 255, + "n_pred": 258, + "n_ref": 268 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7869884575026233, + "FN": 55, + "FP": 148, + "IoU": 0.6487889273356401, + "TN": 1022, + "TP": 375, + "n_pred": 523, + "n_ref": 430 + }, + "3": { + "Dice": 0.897196261682243, + "FN": 0, + "FP": 55, + "IoU": 0.8135593220338984, + "TN": 1305, + "TP": 240, + "n_pred": 295, + "n_ref": 240 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8634097706879362, + "FN": 2, + "FP": 135, + "IoU": 0.7596491228070176, + "TN": 1030, + "TP": 433, + "n_pred": 568, + "n_ref": 435 + }, + "3": { + "Dice": 0.9746348962336664, + "FN": 31, + "FP": 2, + "IoU": 0.9505247376311844, + "TN": 933, + "TP": 634, + "n_pred": 636, + "n_ref": 665 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.46511627906976744, + "FN": 87, + "FP": 28, + "IoU": 0.30303030303030304, + "TN": 635, + "TP": 50, + "n_pred": 78, + "n_ref": 137 + }, + "3": { + "Dice": 0.7353951890034365, + "FN": 77, + "FP": 0, + "IoU": 0.5815217391304348, + "TN": 616, + "TP": 107, + "n_pred": 107, + "n_ref": 184 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9621380846325167, + "FN": 15, + "FP": 2, + "IoU": 0.927038626609442, + "TN": 567, + "TP": 216, + "n_pred": 218, + "n_ref": 231 + }, + "2": { + "Dice": 0.8987012987012987, + "FN": 9, + "FP": 30, + "IoU": 0.8160377358490566, + "TN": 588, + "TP": 173, + "n_pred": 203, + "n_ref": 182 + }, + "3": { + "Dice": 0.9712793733681462, + "FN": 15, + "FP": 7, + "IoU": 0.9441624365482234, + "TN": 406, + "TP": 372, + "n_pred": 379, + "n_ref": 387 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9183976261127597, + "FN": 96, + "FP": 14, + "IoU": 0.8491083676268861, + "TN": 1671, + "TP": 619, + "n_pred": 633, + "n_ref": 715 + }, + "3": { + "Dice": 0.936, + "FN": 10, + "FP": 54, + "IoU": 0.8796992481203008, + "TN": 1868, + "TP": 468, + "n_pred": 522, + "n_ref": 478 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8032786885245902, + "FN": 144, + "FP": 0, + "IoU": 0.6712328767123288, + "TN": 1962, + "TP": 294, + "n_pred": 294, + "n_ref": 438 + }, + "3": { + "Dice": 0.8477751756440282, + "FN": 0, + "FP": 130, + "IoU": 0.7357723577235772, + "TN": 1908, + "TP": 362, + "n_pred": 492, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7792207792207793, + "FN": 3, + "FP": 82, + "IoU": 0.6382978723404256, + "TN": 565, + "TP": 150, + "n_pred": 232, + "n_ref": 153 + }, + "3": { + "Dice": 0.842911877394636, + "FN": 27, + "FP": 55, + "IoU": 0.7284768211920529, + "TN": 498, + "TP": 220, + "n_pred": 275, + "n_ref": 247 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6201923076923077, + "FN": 0, + "FP": 316, + "IoU": 0.44947735191637633, + "TN": 1026, + "TP": 258, + "n_pred": 574, + "n_ref": 258 + }, + "2": { + "Dice": 0.4, + "FN": 1, + "FP": 2, + "IoU": 0.25, + "TN": 1596, + "TP": 1, + "n_pred": 3, + "n_ref": 2 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9196538936959209, + "FN": 16, + "FP": 49, + "IoU": 0.851258581235698, + "TN": 1163, + "TP": 372, + "n_pred": 421, + "n_ref": 388 + }, + "2": { + "Dice": 0.9120750293083235, + "FN": 17, + "FP": 58, + "IoU": 0.8383620689655172, + "TN": 1136, + "TP": 389, + "n_pred": 447, + "n_ref": 406 + }, + "3": { + "Dice": 0.9607843137254902, + "FN": 30, + "FP": 6, + "IoU": 0.9245283018867925, + "TN": 1123, + "TP": 441, + "n_pred": 447, + "n_ref": 471 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7971781305114638, + "FN": 67, + "FP": 48, + "IoU": 0.6627565982404692, + "TN": 1259, + "TP": 226, + "n_pred": 274, + "n_ref": 293 + }, + "2": { + "Dice": 0.9202975557917109, + "FN": 49, + "FP": 26, + "IoU": 0.8523622047244095, + "TN": 1092, + "TP": 433, + "n_pred": 459, + "n_ref": 482 + }, + "3": { + "Dice": 0.9685534591194969, + "FN": 19, + "FP": 21, + "IoU": 0.9390243902439024, + "TN": 944, + "TP": 616, + "n_pred": 637, + "n_ref": 635 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8237476808905381, + "FN": 34, + "FP": 61, + "IoU": 0.7003154574132492, + "TN": 483, + "TP": 222, + "n_pred": 283, + "n_ref": 256 + }, + "3": { + "Dice": 0.9364161849710982, + "FN": 21, + "FP": 34, + "IoU": 0.8804347826086957, + "TN": 340, + "TP": 405, + "n_pred": 439, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 195, + "IoU": 0.0, + "TN": 2205, + "TP": 0, + "n_pred": 195, + "n_ref": 0 + }, + "2": { + "Dice": 0.7272727272727273, + "FN": 3, + "FP": 246, + "IoU": 0.5714285714285714, + "TN": 1819, + "TP": 332, + "n_pred": 578, + "n_ref": 335 + }, + "3": { + "Dice": 0.9681077250177179, + "FN": 42, + "FP": 3, + "IoU": 0.9381868131868132, + "TN": 1672, + "TP": 683, + "n_pred": 686, + "n_ref": 725 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6650124069478908, + "FN": 0, + "FP": 135, + "IoU": 0.49814126394052044, + "TN": 1331, + "TP": 134, + "n_pred": 269, + "n_ref": 134 + }, + "2": { + "Dice": 0.9336530775379697, + "FN": 60, + "FP": 23, + "IoU": 0.8755622188905547, + "TN": 933, + "TP": 584, + "n_pred": 607, + "n_ref": 644 + }, + "3": { + "Dice": 0.8048780487804879, + "FN": 6, + "FP": 26, + "IoU": 0.673469387755102, + "TN": 1502, + "TP": 66, + "n_pred": 92, + "n_ref": 72 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.954177897574124, + "FN": 25, + "FP": 9, + "IoU": 0.9123711340206185, + "TN": 1212, + "TP": 354, + "n_pred": 363, + "n_ref": 379 + }, + "3": { + "Dice": 0.965352449223417, + "FN": 9, + "FP": 20, + "IoU": 0.9330254041570438, + "TN": 1167, + "TP": 404, + "n_pred": 424, + "n_ref": 413 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8269230769230769, + "FN": 1, + "FP": 53, + "IoU": 0.7049180327868853, + "TN": 617, + "TP": 129, + "n_pred": 182, + "n_ref": 130 + }, + "3": { + "Dice": 0.9912280701754386, + "FN": 5, + "FP": 1, + "IoU": 0.9826086956521739, + "TN": 455, + "TP": 339, + "n_pred": 340, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9042145593869731, + "FN": 36, + "FP": 14, + "IoU": 0.8251748251748252, + "TN": 1314, + "TP": 236, + "n_pred": 250, + "n_ref": 272 + }, + "2": { + "Dice": 0.8252148997134671, + "FN": 14, + "FP": 47, + "IoU": 0.7024390243902439, + "TN": 1395, + "TP": 144, + "n_pred": 191, + "n_ref": 158 + }, + "3": { + "Dice": 0.9647779479326187, + "FN": 9, + "FP": 14, + "IoU": 0.9319526627218935, + "TN": 1262, + "TP": 315, + "n_pred": 329, + "n_ref": 324 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9294605809128631, + "FN": 8, + "FP": 9, + "IoU": 0.8682170542635659, + "TN": 1471, + "TP": 112, + "n_pred": 121, + "n_ref": 120 + }, + "2": { + "Dice": 0.9003783102143758, + "FN": 71, + "FP": 8, + "IoU": 0.8188073394495413, + "TN": 1164, + "TP": 357, + "n_pred": 365, + "n_ref": 428 + }, + "3": { + "Dice": 0.8773234200743495, + "FN": 0, + "FP": 66, + "IoU": 0.7814569536423841, + "TN": 1298, + "TP": 236, + "n_pred": 302, + "n_ref": 236 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 8, + "FP": 0, + "IoU": 0.0, + "TN": 1592, + "TP": 0, + "n_pred": 0, + "n_ref": 8 + }, + "2": { + "Dice": 0.9386503067484663, + "FN": 30, + "FP": 10, + "IoU": 0.884393063583815, + "TN": 1254, + "TP": 306, + "n_pred": 316, + "n_ref": 336 + }, + "3": { + "Dice": 0.9563218390804598, + "FN": 0, + "FP": 19, + "IoU": 0.9162995594713657, + "TN": 1373, + "TP": 208, + "n_pred": 227, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.3225806451612903, + "FN": 2, + "FP": 103, + "IoU": 0.19230769230769232, + "TN": 1470, + "TP": 25, + "n_pred": 128, + "n_ref": 27 + }, + "3": { + "Dice": 0.7023923444976077, + "FN": 6, + "FP": 305, + "IoU": 0.5412979351032449, + "TN": 922, + "TP": 367, + "n_pred": 672, + "n_ref": 373 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9353778751369113, + "FN": 1, + "FP": 58, + "IoU": 0.8786008230452675, + "TN": 1914, + "TP": 427, + "n_pred": 485, + "n_ref": 428 + }, + "2": { + "Dice": 0.8846153846153846, + "FN": 86, + "FP": 16, + "IoU": 0.7931034482758621, + "TN": 1907, + "TP": 391, + "n_pred": 407, + "n_ref": 477 + }, + "3": { + "Dice": 0.9820245979186376, + "FN": 10, + "FP": 9, + "IoU": 0.9646840148698885, + "TN": 1862, + "TP": 519, + "n_pred": 528, + "n_ref": 529 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9625246548323472, + "FN": 32, + "FP": 6, + "IoU": 0.9277566539923955, + "TN": 1874, + "TP": 488, + "n_pred": 494, + "n_ref": 520 + }, + "2": { + "Dice": 0.8488063660477454, + "FN": 25, + "FP": 89, + "IoU": 0.7373271889400922, + "TN": 1966, + "TP": 320, + "n_pred": 409, + "n_ref": 345 + }, + "3": { + "Dice": 0.9355322338830585, + "FN": 34, + "FP": 9, + "IoU": 0.8788732394366198, + "TN": 2045, + "TP": 312, + "n_pred": 321, + "n_ref": 346 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9627329192546584, + "FN": 24, + "FP": 0, + "IoU": 0.9281437125748503, + "TN": 2066, + "TP": 310, + "n_pred": 310, + "n_ref": 334 + }, + "2": { + "Dice": 0.6548881036513545, + "FN": 176, + "FP": 117, + "IoU": 0.4868651488616462, + "TN": 1829, + "TP": 278, + "n_pred": 395, + "n_ref": 454 + }, + "3": { + "Dice": 0.8467966573816156, + "FN": 110, + "FP": 0, + "IoU": 0.7342995169082126, + "TN": 1986, + "TP": 304, + "n_pred": 304, + "n_ref": 414 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9680589680589681, + "FN": 10, + "FP": 16, + "IoU": 0.9380952380952381, + "TN": 1980, + "TP": 394, + "n_pred": 410, + "n_ref": 404 + }, + "2": { + "Dice": 0.9230769230769231, + "FN": 39, + "FP": 56, + "IoU": 0.8571428571428571, + "TN": 1735, + "TP": 570, + "n_pred": 626, + "n_ref": 609 + }, + "3": { + "Dice": 0.796875, + "FN": 44, + "FP": 8, + "IoU": 0.6623376623376623, + "TN": 2246, + "TP": 102, + "n_pred": 110, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient097_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.7659683600865846, + "FN": 35.607142857142854, + "FP": 25.19047619047619, + "IoU": 0.68254618222611, + "TN": 1222.4404761904761, + "TP": 202.47619047619048, + "n_pred": 227.66666666666666, + "n_ref": 238.08333333333334 + }, + "mean": { + "1": { + "Dice": 0.6817020097673755, + "FN": 53.392857142857146, + "FP": 24.0, + "IoU": 0.5950936815741233, + "TN": 1252.9285714285713, + "TP": 155.39285714285714, + "n_pred": 179.39285714285714, + "n_ref": 208.78571428571428 + }, + "2": { + "Dice": 0.7850066576793865, + "FN": 36.25, + "FP": 34.607142857142854, + "IoU": 0.6776024173920857, + "TN": 1241.7857142857142, + "TP": 173.07142857142858, + "n_pred": 207.67857142857142, + "n_ref": 209.32142857142858 + }, + "3": { + "Dice": 0.8311964128129922, + "FN": 17.178571428571427, + "FP": 16.964285714285715, + "IoU": 0.7749424477121206, + "TN": 1172.607142857143, + "TP": 278.9642857142857, + "n_pred": 295.92857142857144, + "n_ref": 296.14285714285717 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8770642201834863, + "FN": 19, + "FP": 48, + "IoU": 0.7810457516339869, + "TN": 1294, + "TP": 239, + "n_pred": 287, + "n_ref": 258 + }, + "3": { + "Dice": 0.9555555555555556, + "FN": 35, + "FP": 1, + "IoU": 0.9148936170212766, + "TN": 1177, + "TP": 387, + "n_pred": 388, + "n_ref": 422 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9220607661822986, + "FN": 10, + "FP": 49, + "IoU": 0.8553921568627451, + "TN": 1192, + "TP": 349, + "n_pred": 398, + "n_ref": 359 + }, + "2": { + "Dice": 0.6666666666666666, + "FN": 28, + "FP": 0, + "IoU": 0.5, + "TN": 1544, + "TP": 28, + "n_pred": 28, + "n_ref": 56 + }, + "3": { + "Dice": 0.0, + "FN": 4, + "FP": 0, + "IoU": 0.0, + "TN": 1596, + "TP": 0, + "n_pred": 0, + "n_ref": 4 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6906187624750499, + "FN": 143, + "FP": 12, + "IoU": 0.5274390243902439, + "TN": 2872, + "TP": 173, + "n_pred": 185, + "n_ref": 316 + }, + "2": { + "Dice": 0.8571428571428571, + "FN": 105, + "FP": 77, + "IoU": 0.75, + "TN": 2472, + "TP": 546, + "n_pred": 623, + "n_ref": 651 + }, + "3": { + "Dice": 0.9466776045939295, + "FN": 50, + "FP": 15, + "IoU": 0.8987538940809969, + "TN": 2558, + "TP": 577, + "n_pred": 592, + "n_ref": 627 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8552338530066815, + "FN": 24, + "FP": 41, + "IoU": 0.7470817120622568, + "TN": 2143, + "TP": 192, + "n_pred": 233, + "n_ref": 216 + }, + "2": { + "Dice": 0.7813673929376409, + "FN": 276, + "FP": 15, + "IoU": 0.6411837237977805, + "TN": 1589, + "TP": 520, + "n_pred": 535, + "n_ref": 796 + }, + "3": { + "Dice": 0.6216216216216216, + "FN": 21, + "FP": 119, + "IoU": 0.45098039215686275, + "TN": 2145, + "TP": 115, + "n_pred": 234, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3575638506876228, + "FN": 317, + "FP": 10, + "IoU": 0.21770334928229665, + "TN": 1982, + "TP": 91, + "n_pred": 101, + "n_ref": 408 + }, + "2": { + "Dice": 0.8309572301425662, + "FN": 6, + "FP": 77, + "IoU": 0.710801393728223, + "TN": 2113, + "TP": 204, + "n_pred": 281, + "n_ref": 210 + }, + "3": { + "Dice": 0.9245647969052224, + "FN": 39, + "FP": 0, + "IoU": 0.8597122302158273, + "TN": 2122, + "TP": 239, + "n_pred": 239, + "n_ref": 278 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5879120879120879, + "FN": 59, + "FP": 91, + "IoU": 0.4163424124513619, + "TN": 1343, + "TP": 107, + "n_pred": 198, + "n_ref": 166 + }, + "3": { + "Dice": 0.930715935334873, + "FN": 1, + "FP": 59, + "IoU": 0.8704103671706264, + "TN": 1137, + "TP": 403, + "n_pred": 462, + "n_ref": 404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 43, + "IoU": 0.0, + "TN": 757, + "TP": 0, + "n_pred": 43, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9739583333333334, + "FN": 15, + "FP": 5, + "IoU": 0.949238578680203, + "TN": 1206, + "TP": 374, + "n_pred": 379, + "n_ref": 389 + }, + "3": { + "Dice": 0.9759615384615384, + "FN": 5, + "FP": 15, + "IoU": 0.9530516431924883, + "TN": 1174, + "TP": 406, + "n_pred": 421, + "n_ref": 411 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9357142857142857, + "FN": 10, + "FP": 8, + "IoU": 0.8791946308724832, + "TN": 651, + "TP": 131, + "n_pred": 139, + "n_ref": 141 + }, + "3": { + "Dice": 0.9459459459459459, + "FN": 0, + "FP": 8, + "IoU": 0.8974358974358975, + "TN": 722, + "TP": 70, + "n_pred": 78, + "n_ref": 70 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6927083333333334, + "FN": 16, + "FP": 102, + "IoU": 0.5298804780876494, + "TN": 1349, + "TP": 133, + "n_pred": 235, + "n_ref": 149 + }, + "3": { + "Dice": 0.911504424778761, + "FN": 99, + "FP": 1, + "IoU": 0.8373983739837398, + "TN": 985, + "TP": 515, + "n_pred": 516, + "n_ref": 614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9404761904761905, + "FN": 10, + "FP": 30, + "IoU": 0.8876404494382022, + "TN": 1244, + "TP": 316, + "n_pred": 346, + "n_ref": 326 + }, + "2": { + "Dice": 0.5903614457831325, + "FN": 99, + "FP": 37, + "IoU": 0.4188034188034188, + "TN": 1366, + "TP": 98, + "n_pred": 135, + "n_ref": 197 + }, + "3": { + "Dice": 0.6397058823529411, + "FN": 18, + "FP": 80, + "IoU": 0.4702702702702703, + "TN": 1415, + "TP": 87, + "n_pred": 167, + "n_ref": 105 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9106382978723404, + "FN": 83, + "FP": 1, + "IoU": 0.8359375, + "TN": 1888, + "TP": 428, + "n_pred": 429, + "n_ref": 511 + }, + "2": { + "Dice": 0.8883720930232558, + "FN": 2, + "FP": 46, + "IoU": 0.799163179916318, + "TN": 2161, + "TP": 191, + "n_pred": 237, + "n_ref": 193 + }, + "3": { + "Dice": 0.9858644436389996, + "FN": 37, + "FP": 2, + "IoU": 0.9721229449606862, + "TN": 1001, + "TP": 1360, + "n_pred": 1362, + "n_ref": 1397 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 466, + "FP": 0, + "IoU": 0.0, + "TN": 1134, + "TP": 0, + "n_pred": 0, + "n_ref": 466 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.36486486486486486, + "FN": 15, + "FP": 267, + "IoU": 0.2231404958677686, + "TN": 437, + "TP": 81, + "n_pred": 348, + "n_ref": 96 + }, + "2": { + "Dice": 0.8678414096916299, + "FN": 7, + "FP": 53, + "IoU": 0.7665369649805448, + "TN": 543, + "TP": 197, + "n_pred": 250, + "n_ref": 204 + }, + "3": { + "Dice": 0.8, + "FN": 26, + "FP": 0, + "IoU": 0.6666666666666666, + "TN": 722, + "TP": 52, + "n_pred": 52, + "n_ref": 78 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.896, + "FN": 11, + "FP": 28, + "IoU": 0.8115942028985508, + "TN": 593, + "TP": 168, + "n_pred": 196, + "n_ref": 179 + }, + "3": { + "Dice": 0.967741935483871, + "FN": 3, + "FP": 5, + "IoU": 0.9375, + "TN": 672, + "TP": 120, + "n_pred": 125, + "n_ref": 123 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 163, + "IoU": 0.0, + "TN": 1437, + "TP": 0, + "n_pred": 163, + "n_ref": 0 + }, + "2": { + "Dice": 0.8556149732620321, + "FN": 10, + "FP": 71, + "IoU": 0.7476635514018691, + "TN": 1279, + "TP": 240, + "n_pred": 311, + "n_ref": 250 + }, + "3": { + "Dice": 0.9565217391304348, + "FN": 18, + "FP": 0, + "IoU": 0.9166666666666666, + "TN": 1384, + "TP": 198, + "n_pred": 198, + "n_ref": 216 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8974358974358975, + "FN": 9, + "FP": 47, + "IoU": 0.813953488372093, + "TN": 499, + "TP": 245, + "n_pred": 292, + "n_ref": 254 + }, + "3": { + "Dice": 0.9587628865979382, + "FN": 26, + "FP": 6, + "IoU": 0.9207920792079208, + "TN": 396, + "TP": 372, + "n_pred": 378, + "n_ref": 398 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8571428571428571, + "FN": 0, + "FP": 2, + "IoU": 0.75, + "TN": 792, + "TP": 6, + "n_pred": 8, + "n_ref": 6 + }, + "2": { + "Dice": 0.9256756756756757, + "FN": 12, + "FP": 32, + "IoU": 0.8616352201257862, + "TN": 482, + "TP": 274, + "n_pred": 306, + "n_ref": 286 + }, + "3": { + "Dice": 0.9795081967213115, + "FN": 3, + "FP": 7, + "IoU": 0.9598393574297188, + "TN": 551, + "TP": 239, + "n_pred": 246, + "n_ref": 242 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9361111111111111, + "FN": 92, + "FP": 0, + "IoU": 0.8798955613577023, + "TN": 834, + "TP": 674, + "n_pred": 674, + "n_ref": 766 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.47706422018348627, + "FN": 57, + "FP": 0, + "IoU": 0.3132530120481928, + "TN": 717, + "TP": 26, + "n_pred": 26, + "n_ref": 83 + }, + "2": { + "Dice": 0.7700534759358288, + "FN": 64, + "FP": 22, + "IoU": 0.6260869565217392, + "TN": 570, + "TP": 144, + "n_pred": 166, + "n_ref": 208 + }, + "3": { + "Dice": 0.8920353982300885, + "FN": 1, + "FP": 60, + "IoU": 0.805111821086262, + "TN": 487, + "TP": 252, + "n_pred": 312, + "n_ref": 253 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8007662835249042, + "FN": 95, + "FP": 9, + "IoU": 0.6677316293929713, + "TN": 1287, + "TP": 209, + "n_pred": 218, + "n_ref": 304 + }, + "2": { + "Dice": 0.7789046653144016, + "FN": 122, + "FP": 96, + "IoU": 0.6378737541528239, + "TN": 998, + "TP": 384, + "n_pred": 480, + "n_ref": 506 + }, + "3": { + "Dice": 0.867513611615245, + "FN": 73, + "FP": 0, + "IoU": 0.7660256410256411, + "TN": 1288, + "TP": 239, + "n_pred": 239, + "n_ref": 312 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9390039171796307, + "FN": 69, + "FP": 40, + "IoU": 0.8850210970464135, + "TN": 1452, + "TP": 839, + "n_pred": 879, + "n_ref": 908 + }, + "2": { + "Dice": 0.918552036199095, + "FN": 5, + "FP": 31, + "IoU": 0.8493723849372385, + "TN": 2161, + "TP": 203, + "n_pred": 234, + "n_ref": 208 + }, + "3": { + "Dice": 0.9411764705882353, + "FN": 4, + "FP": 5, + "IoU": 0.8888888888888888, + "TN": 2319, + "TP": 72, + "n_pred": 77, + "n_ref": 76 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.939799331103679, + "FN": 6, + "FP": 30, + "IoU": 0.886435331230284, + "TN": 1283, + "TP": 281, + "n_pred": 311, + "n_ref": 287 + }, + "2": { + "Dice": 0.7682539682539683, + "FN": 61, + "FP": 12, + "IoU": 0.6237113402061856, + "TN": 1406, + "TP": 121, + "n_pred": 133, + "n_ref": 182 + }, + "3": { + "Dice": 0.9820254274441035, + "FN": 8, + "FP": 33, + "IoU": 0.9646856158484065, + "TN": 439, + "TP": 1120, + "n_pred": 1153, + "n_ref": 1128 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9158878504672897, + "FN": 108, + "FP": 18, + "IoU": 0.8448275862068966, + "TN": 788, + "TP": 686, + "n_pred": 704, + "n_ref": 794 + }, + "2": { + "Dice": 0.8632707774798928, + "FN": 49, + "FP": 2, + "IoU": 0.7594339622641509, + "TN": 1388, + "TP": 161, + "n_pred": 163, + "n_ref": 210 + }, + "3": { + "Dice": 0.9637681159420289, + "FN": 2, + "FP": 28, + "IoU": 0.9300699300699301, + "TN": 1171, + "TP": 399, + "n_pred": 427, + "n_ref": 401 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8313253012048193, + "FN": 30, + "FP": 26, + "IoU": 0.711340206185567, + "TN": 1406, + "TP": 138, + "n_pred": 164, + "n_ref": 168 + }, + "3": { + "Dice": 0.9703459637561779, + "FN": 8, + "FP": 28, + "IoU": 0.9424, + "TN": 975, + "TP": 589, + "n_pred": 617, + "n_ref": 597 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.7586425666456252, + "FN": 27.222222222222225, + "FP": 29.432098765432098, + "IoU": 0.6917551515484971, + "TN": 1215.641975308642, + "TP": 179.55555555555557, + "n_pred": 208.98765432098767, + "n_ref": 206.7777777777778 + }, + "mean": { + "1": { + "Dice": 0.643848913246087, + "FN": 23.814814814814813, + "FP": 45.0, + "IoU": 0.5683444884526847, + "TN": 1238.5925925925926, + "TP": 144.44444444444446, + "n_pred": 189.44444444444446, + "n_ref": 168.25925925925927 + }, + "2": { + "Dice": 0.8118786539248538, + "FN": 28.925925925925927, + "FP": 19.333333333333332, + "IoU": 0.7434162929594174, + "TN": 1194.4444444444443, + "TP": 209.14814814814815, + "n_pred": 228.4814814814815, + "n_ref": 238.07407407407408 + }, + "3": { + "Dice": 0.820200132765935, + "FN": 28.925925925925927, + "FP": 23.962962962962962, + "IoU": 0.7635046732333892, + "TN": 1213.888888888889, + "TP": 185.07407407407408, + "n_pred": 209.03703703703704, + "n_ref": 214.0 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8350045578851413, + "FN": 0, + "FP": 181, + "IoU": 0.7167449139280125, + "TN": 961, + "TP": 458, + "n_pred": 639, + "n_ref": 458 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8970873786407767, + "FN": 1, + "FP": 52, + "IoU": 0.8133802816901409, + "TN": 516, + "TP": 231, + "n_pred": 283, + "n_ref": 232 + }, + "3": { + "Dice": 0.970276008492569, + "FN": 27, + "FP": 1, + "IoU": 0.9422680412371134, + "TN": 315, + "TP": 457, + "n_pred": 458, + "n_ref": 484 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 45, + "IoU": 0.0, + "TN": 1555, + "TP": 0, + "n_pred": 45, + "n_ref": 0 + }, + "2": { + "Dice": 0.9219330855018587, + "FN": 4, + "FP": 101, + "IoU": 0.8551724137931035, + "TN": 875, + "TP": 620, + "n_pred": 721, + "n_ref": 624 + }, + "3": { + "Dice": 0.9555555555555556, + "FN": 44, + "FP": 0, + "IoU": 0.9148936170212766, + "TN": 1083, + "TP": 473, + "n_pred": 473, + "n_ref": 517 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9810981098109811, + "FN": 9, + "FP": 12, + "IoU": 0.9628975265017667, + "TN": 1034, + "TP": 545, + "n_pred": 557, + "n_ref": 554 + }, + "3": { + "Dice": 0.9649484536082474, + "FN": 12, + "FP": 5, + "IoU": 0.9322709163346613, + "TN": 1349, + "TP": 234, + "n_pred": 239, + "n_ref": 246 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.915929203539823, + "FN": 35, + "FP": 3, + "IoU": 0.8448979591836735, + "TN": 555, + "TP": 207, + "n_pred": 210, + "n_ref": 242 + }, + "3": { + "Dice": 0.971830985915493, + "FN": 2, + "FP": 14, + "IoU": 0.9452054794520548, + "TN": 508, + "TP": 276, + "n_pred": 290, + "n_ref": 278 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9395348837209302, + "FN": 24, + "FP": 28, + "IoU": 0.8859649122807017, + "TN": 1144, + "TP": 404, + "n_pred": 432, + "n_ref": 428 + }, + "2": { + "Dice": 0.7797716150081566, + "FN": 14, + "FP": 121, + "IoU": 0.6390374331550802, + "TN": 1226, + "TP": 239, + "n_pred": 360, + "n_ref": 253 + }, + "3": { + "Dice": 0.4746317512274959, + "FN": 1, + "FP": 320, + "IoU": 0.3111587982832618, + "TN": 1134, + "TP": 145, + "n_pred": 465, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.914856136230182, + "FN": 97, + "FP": 48, + "IoU": 0.8430735930735931, + "TN": 1476, + "TP": 779, + "n_pred": 827, + "n_ref": 876 + }, + "2": { + "Dice": 0.9085794655414908, + "FN": 29, + "FP": 36, + "IoU": 0.8324742268041238, + "TN": 2012, + "TP": 323, + "n_pred": 359, + "n_ref": 352 + }, + "3": { + "Dice": 0.9608695652173913, + "FN": 36, + "FP": 0, + "IoU": 0.9246861924686193, + "TN": 1922, + "TP": 442, + "n_pred": 442, + "n_ref": 478 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9809402795425667, + "FN": 8, + "FP": 7, + "IoU": 0.9625935162094763, + "TN": 1199, + "TP": 386, + "n_pred": 393, + "n_ref": 394 + }, + "3": { + "Dice": 0.9814585908529048, + "FN": 7, + "FP": 8, + "IoU": 0.9635922330097088, + "TN": 1188, + "TP": 397, + "n_pred": 405, + "n_ref": 404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7950617283950617, + "FN": 13, + "FP": 153, + "IoU": 0.6598360655737705, + "TN": 1912, + "TP": 322, + "n_pred": 475, + "n_ref": 335 + }, + "2": { + "Dice": 0.0, + "FN": 2, + "FP": 0, + "IoU": 0.0, + "TN": 2398, + "TP": 0, + "n_pred": 0, + "n_ref": 2 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 2399, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": 0.9414715719063546, + "FN": 34, + "FP": 36, + "IoU": 0.8894154818325435, + "TN": 1767, + "TP": 563, + "n_pred": 599, + "n_ref": 597 + }, + "3": { + "Dice": 0.9542124542124543, + "FN": 34, + "FP": 16, + "IoU": 0.9124343257443083, + "TN": 1829, + "TP": 521, + "n_pred": 537, + "n_ref": 555 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8998459167950693, + "FN": 63, + "FP": 2, + "IoU": 0.8179271708683473, + "TN": 1243, + "TP": 292, + "n_pred": 294, + "n_ref": 355 + }, + "3": { + "Dice": 0.3, + "FN": 0, + "FP": 42, + "IoU": 0.17647058823529413, + "TN": 1549, + "TP": 9, + "n_pred": 51, + "n_ref": 9 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9269406392694064, + "FN": 19, + "FP": 13, + "IoU": 0.8638297872340426, + "TN": 565, + "TP": 203, + "n_pred": 216, + "n_ref": 222 + }, + "3": { + "Dice": 0.9808102345415778, + "FN": 4, + "FP": 5, + "IoU": 0.9623430962343096, + "TN": 561, + "TP": 230, + "n_pred": 235, + "n_ref": 234 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9556886227544911, + "FN": 5, + "FP": 32, + "IoU": 0.9151376146788991, + "TN": 1164, + "TP": 399, + "n_pred": 431, + "n_ref": 404 + }, + "2": { + "Dice": 0.9453376205787781, + "FN": 26, + "FP": 8, + "IoU": 0.8963414634146342, + "TN": 1272, + "TP": 294, + "n_pred": 302, + "n_ref": 320 + }, + "3": { + "Dice": 0.959349593495935, + "FN": 3, + "FP": 2, + "IoU": 0.921875, + "TN": 1536, + "TP": 59, + "n_pred": 61, + "n_ref": 62 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9122807017543859, + "FN": 30, + "FP": 10, + "IoU": 0.8387096774193549, + "TN": 552, + "TP": 208, + "n_pred": 218, + "n_ref": 238 + }, + "3": { + "Dice": 0.9667250437828371, + "FN": 8, + "FP": 30, + "IoU": 0.9355932203389831, + "TN": 210, + "TP": 552, + "n_pred": 582, + "n_ref": 560 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9645184648805214, + "FN": 26, + "FP": 23, + "IoU": 0.9314685314685315, + "TN": 885, + "TP": 666, + "n_pred": 689, + "n_ref": 692 + }, + "3": { + "Dice": 0.9700332963374029, + "FN": 1, + "FP": 26, + "IoU": 0.9418103448275862, + "TN": 1136, + "TP": 437, + "n_pred": 463, + "n_ref": 438 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.38576512455516015, + "FN": 232, + "FP": 631, + "IoU": 0.23897707231040563, + "TN": 1266, + "TP": 271, + "n_pred": 902, + "n_ref": 503 + }, + "2": { + "Dice": 0.12648221343873517, + "FN": 221, + "FP": 0, + "IoU": 0.06751054852320675, + "TN": 2163, + "TP": 16, + "n_pred": 16, + "n_ref": 237 + }, + "3": { + "Dice": 0.021505376344086023, + "FN": 546, + "FP": 0, + "IoU": 0.010869565217391304, + "TN": 1848, + "TP": 6, + "n_pred": 6, + "n_ref": 552 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9596879063719116, + "FN": 4, + "FP": 27, + "IoU": 0.9225, + "TN": 400, + "TP": 369, + "n_pred": 396, + "n_ref": 373 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9044313934863855, + "FN": 126, + "FP": 53, + "IoU": 0.8255360623781677, + "TN": 574, + "TP": 847, + "n_pred": 900, + "n_ref": 973 + }, + "2": { + "Dice": 0.8098859315589354, + "FN": 97, + "FP": 3, + "IoU": 0.6805111821086262, + "TN": 1287, + "TP": 213, + "n_pred": 216, + "n_ref": 310 + }, + "3": { + "Dice": 0.7244094488188977, + "FN": 0, + "FP": 35, + "IoU": 0.5679012345679012, + "TN": 1519, + "TP": 46, + "n_pred": 81, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3923076923076923, + "FN": 142, + "FP": 16, + "IoU": 0.24401913875598086, + "TN": 591, + "TP": 51, + "n_pred": 67, + "n_ref": 193 + }, + "2": { + "Dice": 0.892018779342723, + "FN": 20, + "FP": 26, + "IoU": 0.8050847457627118, + "TN": 564, + "TP": 190, + "n_pred": 216, + "n_ref": 210 + }, + "3": { + "Dice": 0.9163346613545816, + "FN": 13, + "FP": 8, + "IoU": 0.8455882352941176, + "TN": 664, + "TP": 115, + "n_pred": 123, + "n_ref": 128 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8096947935368043, + "FN": 143, + "FP": 69, + "IoU": 0.6802413273001509, + "TN": 937, + "TP": 451, + "n_pred": 520, + "n_ref": 594 + }, + "3": { + "Dice": 0.8704512372634643, + "FN": 43, + "FP": 135, + "IoU": 0.770618556701031, + "TN": 824, + "TP": 598, + "n_pred": 733, + "n_ref": 641 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient095_frame12.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.7564763109030256, + "FN": 40.382716049382715, + "FP": 43.58024691358025, + "IoU": 0.6760247076009923, + "TN": 1346.2962962962963, + "TP": 229.0, + "n_pred": 272.5802469135802, + "n_ref": 269.38271604938274 + }, + "mean": { + "1": { + "Dice": 0.6014501362139048, + "FN": 51.333333333333336, + "FP": 44.7037037037037, + "IoU": 0.5222514359793161, + "TN": 1403.4444444444443, + "TP": 159.77777777777777, + "n_pred": 204.4814814814815, + "n_ref": 211.11111111111111 + }, + "2": { + "Dice": 0.7832772077395433, + "FN": 52.22222222222222, + "FP": 39.74074074074074, + "IoU": 0.6843505163676438, + "TN": 1312.851851851852, + "TP": 254.44444444444446, + "n_pred": 294.18518518518516, + "n_ref": 306.6666666666667 + }, + "3": { + "Dice": 0.8847015887556283, + "FN": 17.59259259259259, + "FP": 46.2962962962963, + "IoU": 0.8214721704560168, + "TN": 1322.5925925925926, + "TP": 272.77777777777777, + "n_pred": 319.0740740740741, + "n_ref": 290.3703703703704 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7540229885057471, + "FN": 214, + "FP": 0, + "IoU": 0.6051660516605166, + "TN": 1858, + "TP": 328, + "n_pred": 328, + "n_ref": 542 + }, + "2": { + "Dice": 0.8327402135231317, + "FN": 3, + "FP": 44, + "IoU": 0.7134146341463414, + "TN": 2236, + "TP": 117, + "n_pred": 161, + "n_ref": 120 + }, + "3": { + "Dice": 0.9689922480620154, + "FN": 5, + "FP": 3, + "IoU": 0.9398496240601504, + "TN": 2267, + "TP": 125, + "n_pred": 128, + "n_ref": 130 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8547717842323651, + "FN": 64, + "FP": 6, + "IoU": 0.7463768115942029, + "TN": 1324, + "TP": 206, + "n_pred": 212, + "n_ref": 270 + }, + "2": { + "Dice": 0.8, + "FN": 28, + "FP": 0, + "IoU": 0.6666666666666666, + "TN": 1516, + "TP": 56, + "n_pred": 56, + "n_ref": 84 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8096026490066225, + "FN": 16, + "FP": 214, + "IoU": 0.6801112656467315, + "TN": 1681, + "TP": 489, + "n_pred": 703, + "n_ref": 505 + }, + "2": { + "Dice": 0.8305343511450382, + "FN": 122, + "FP": 100, + "IoU": 0.7101827676240209, + "TN": 1634, + "TP": 544, + "n_pred": 644, + "n_ref": 666 + }, + "3": { + "Dice": 0.9327354260089686, + "FN": 21, + "FP": 39, + "IoU": 0.8739495798319328, + "TN": 1924, + "TP": 416, + "n_pred": 455, + "n_ref": 437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5806451612903226, + "FN": 13, + "FP": 0, + "IoU": 0.4090909090909091, + "TN": 778, + "TP": 9, + "n_pred": 9, + "n_ref": 22 + }, + "3": { + "Dice": 0.9917144678138942, + "FN": 0, + "FP": 13, + "IoU": 0.9835651074589128, + "TN": 9, + "TP": 778, + "n_pred": 791, + "n_ref": 778 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9086021505376344, + "FN": 1, + "FP": 33, + "IoU": 0.8325123152709359, + "TN": 597, + "TP": 169, + "n_pred": 202, + "n_ref": 170 + }, + "3": { + "Dice": 0.9523809523809523, + "FN": 18, + "FP": 1, + "IoU": 0.9090909090909091, + "TN": 591, + "TP": 190, + "n_pred": 191, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 199, + "IoU": 0.0, + "TN": 1401, + "TP": 0, + "n_pred": 199, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9602510460251046, + "FN": 29, + "FP": 9, + "IoU": 0.9235412474849095, + "TN": 1103, + "TP": 459, + "n_pred": 468, + "n_ref": 488 + }, + "2": { + "Dice": 0.9325396825396826, + "FN": 32, + "FP": 36, + "IoU": 0.8736059479553904, + "TN": 1062, + "TP": 470, + "n_pred": 506, + "n_ref": 502 + }, + "3": { + "Dice": 0.978688524590164, + "FN": 3, + "FP": 23, + "IoU": 0.9582664526484751, + "TN": 977, + "TP": 597, + "n_pred": 620, + "n_ref": 600 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8917987594762233, + "FN": 103, + "FP": 54, + "IoU": 0.804726368159204, + "TN": 796, + "TP": 647, + "n_pred": 701, + "n_ref": 750 + }, + "3": { + "Dice": 0.950185873605948, + "FN": 61, + "FP": 6, + "IoU": 0.9050991501416431, + "TN": 894, + "TP": 639, + "n_pred": 645, + "n_ref": 700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.593279258400927, + "FN": 88, + "FP": 263, + "IoU": 0.42174629324546953, + "TN": 1793, + "TP": 256, + "n_pred": 519, + "n_ref": 344 + }, + "2": { + "Dice": 0.881746513038205, + "FN": 86, + "FP": 109, + "IoU": 0.7885032537960954, + "TN": 1478, + "TP": 727, + "n_pred": 836, + "n_ref": 813 + }, + "3": { + "Dice": 0.7699248120300752, + "FN": 67, + "FP": 86, + "IoU": 0.6259168704156479, + "TN": 1991, + "TP": 256, + "n_pred": 342, + "n_ref": 323 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8211920529801324, + "FN": 4, + "FP": 50, + "IoU": 0.6966292134831461, + "TN": 1422, + "TP": 124, + "n_pred": 174, + "n_ref": 128 + }, + "2": { + "Dice": 0.5962988348183688, + "FN": 547, + "FP": 42, + "IoU": 0.4248046875, + "TN": 576, + "TP": 435, + "n_pred": 477, + "n_ref": 982 + }, + "3": { + "Dice": 0.8006279434850864, + "FN": 117, + "FP": 10, + "IoU": 0.6675392670157068, + "TN": 1218, + "TP": 255, + "n_pred": 265, + "n_ref": 372 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 26, + "IoU": 0.0, + "TN": 1574, + "TP": 0, + "n_pred": 26, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8592592592592593, + "FN": 47, + "FP": 162, + "IoU": 0.7532467532467533, + "TN": 1553, + "TP": 638, + "n_pred": 800, + "n_ref": 685 + }, + "2": { + "Dice": 0.36613272311212813, + "FN": 76, + "FP": 201, + "IoU": 0.22408963585434175, + "TN": 2043, + "TP": 80, + "n_pred": 281, + "n_ref": 156 + }, + "3": { + "Dice": 0.9061728395061729, + "FN": 0, + "FP": 76, + "IoU": 0.8284424379232506, + "TN": 1957, + "TP": 367, + "n_pred": 443, + "n_ref": 367 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8672897196261682, + "FN": 8, + "FP": 63, + "IoU": 0.7656765676567657, + "TN": 497, + "TP": 232, + "n_pred": 295, + "n_ref": 240 + }, + "3": { + "Dice": 0.9861751152073732, + "FN": 0, + "FP": 6, + "IoU": 0.9727272727272728, + "TN": 580, + "TP": 214, + "n_pred": 220, + "n_ref": 214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8168316831683168, + "FN": 19, + "FP": 55, + "IoU": 0.6903765690376569, + "TN": 1361, + "TP": 165, + "n_pred": 220, + "n_ref": 184 + }, + "3": { + "Dice": 0.9437559580552908, + "FN": 49, + "FP": 10, + "IoU": 0.8935018050541517, + "TN": 1046, + "TP": 495, + "n_pred": 505, + "n_ref": 544 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9192546583850931, + "FN": 52, + "FP": 0, + "IoU": 0.8505747126436781, + "TN": 2052, + "TP": 296, + "n_pred": 296, + "n_ref": 348 + }, + "2": { + "Dice": 0.894681960375391, + "FN": 49, + "FP": 52, + "IoU": 0.809433962264151, + "TN": 1870, + "TP": 429, + "n_pred": 481, + "n_ref": 478 + }, + "3": { + "Dice": 0.945619335347432, + "FN": 12, + "FP": 24, + "IoU": 0.8968481375358166, + "TN": 2051, + "TP": 313, + "n_pred": 337, + "n_ref": 325 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 2, + "FP": 28, + "IoU": 0.0, + "TN": 1570, + "TP": 0, + "n_pred": 28, + "n_ref": 2 + }, + "2": { + "Dice": 0.9208791208791208, + "FN": 28, + "FP": 44, + "IoU": 0.8533604887983707, + "TN": 1109, + "TP": 419, + "n_pred": 463, + "n_ref": 447 + }, + "3": { + "Dice": 0.532319391634981, + "FN": 44, + "FP": 79, + "IoU": 0.3626943005181347, + "TN": 1407, + "TP": 70, + "n_pred": 149, + "n_ref": 114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.799163179916318, + "FN": 3, + "FP": 93, + "IoU": 0.6655052264808362, + "TN": 513, + "TP": 191, + "n_pred": 284, + "n_ref": 194 + }, + "3": { + "Dice": 0.9483282674772037, + "FN": 34, + "FP": 0, + "IoU": 0.9017341040462428, + "TN": 454, + "TP": 312, + "n_pred": 312, + "n_ref": 346 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9234338747099768, + "FN": 6, + "FP": 60, + "IoU": 0.8577586206896551, + "TN": 336, + "TP": 398, + "n_pred": 458, + "n_ref": 404 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8624833110814419, + "FN": 70, + "FP": 33, + "IoU": 0.7582159624413145, + "TN": 1174, + "TP": 323, + "n_pred": 356, + "n_ref": 393 + }, + "2": { + "Dice": 0.9090909090909091, + "FN": 0, + "FP": 5, + "IoU": 0.8333333333333334, + "TN": 1570, + "TP": 25, + "n_pred": 30, + "n_ref": 25 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.18181818181818182, + "FN": 720, + "FP": 0, + "IoU": 0.1, + "TN": 1600, + "TP": 80, + "n_pred": 80, + "n_ref": 800 + }, + "2": { + "Dice": 0.8982035928143712, + "FN": 75, + "FP": 10, + "IoU": 0.8152173913043478, + "TN": 1940, + "TP": 375, + "n_pred": 385, + "n_ref": 450 + }, + "3": { + "Dice": 0.42040185471406494, + "FN": 10, + "FP": 740, + "IoU": 0.26614481409001955, + "TN": 1378, + "TP": 272, + "n_pred": 1012, + "n_ref": 282 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7375, + "FN": 25, + "FP": 143, + "IoU": 0.5841584158415841, + "TN": 1196, + "TP": 236, + "n_pred": 379, + "n_ref": 261 + }, + "2": { + "Dice": 0.8979591836734694, + "FN": 36, + "FP": 9, + "IoU": 0.8148148148148148, + "TN": 1357, + "TP": 198, + "n_pred": 207, + "n_ref": 234 + }, + "3": { + "Dice": 0.9809630459126539, + "FN": 4, + "FP": 13, + "IoU": 0.9626373626373627, + "TN": 1145, + "TP": 438, + "n_pred": 451, + "n_ref": 442 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 2390, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + }, + "2": { + "Dice": 0.9059117402164862, + "FN": 35, + "FP": 78, + "IoU": 0.8280060882800608, + "TN": 1743, + "TP": 544, + "n_pred": 622, + "n_ref": 579 + }, + "3": { + "Dice": 0.9681717246484086, + "FN": 26, + "FP": 17, + "IoU": 0.9383070301291249, + "TN": 1703, + "TP": 654, + "n_pred": 671, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9477832512315271, + "FN": 49, + "FP": 4, + "IoU": 0.900749063670412, + "TN": 1066, + "TP": 481, + "n_pred": 485, + "n_ref": 530 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 1595, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient099_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9177718832891246, + "FN": 146, + "FP": 40, + "IoU": 0.8480392156862745, + "TN": 1176, + "TP": 1038, + "n_pred": 1078, + "n_ref": 1184 + }, + "3": { + "Dice": 0.9474708171206225, + "FN": 4, + "FP": 104, + "IoU": 0.9001848428835489, + "TN": 1318, + "TP": 974, + "n_pred": 1078, + "n_ref": 978 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8468790507968446, + "FN": 31.148148148148152, + "FP": 22.950617283950617, + "IoU": 0.7690710470855309, + "TN": 1465.172839506173, + "TP": 258.5061728395062, + "n_pred": 281.4567901234568, + "n_ref": 289.65432098765433 + }, + "mean": { + "1": { + "Dice": 0.7433106523863733, + "FN": 38.407407407407405, + "FP": 32.51851851851852, + "IoU": 0.648286861132491, + "TN": 1503.1851851851852, + "TP": 203.66666666666666, + "n_pred": 236.1851851851852, + "n_ref": 242.07407407407408 + }, + "2": { + "Dice": 0.867146166720158, + "FN": 42.77777777777778, + "FP": 25.814814814814813, + "IoU": 0.7814272682135521, + "TN": 1427.4814814814815, + "TP": 281.7037037037037, + "n_pred": 307.51851851851853, + "n_ref": 324.48148148148147 + }, + "3": { + "Dice": 0.9301803332840026, + "FN": 12.25925925925926, + "FP": 10.518518518518519, + "IoU": 0.8774990119105494, + "TN": 1464.851851851852, + "TP": 290.14814814814815, + "n_pred": 300.6666666666667, + "n_ref": 302.4074074074074 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.5573770491803278, + "FN": 95, + "FP": 13, + "IoU": 0.38636363636363635, + "TN": 624, + "TP": 68, + "n_pred": 81, + "n_ref": 163 + }, + "2": { + "Dice": 0.9147286821705426, + "FN": 22, + "FP": 22, + "IoU": 0.8428571428571429, + "TN": 520, + "TP": 236, + "n_pred": 258, + "n_ref": 258 + }, + "3": { + "Dice": 0.9237668161434978, + "FN": 17, + "FP": 0, + "IoU": 0.8583333333333333, + "TN": 680, + "TP": 103, + "n_pred": 103, + "n_ref": 120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7069271758436945, + "FN": 161, + "FP": 4, + "IoU": 0.5467032967032966, + "TN": 1236, + "TP": 199, + "n_pred": 203, + "n_ref": 360 + }, + "2": { + "Dice": 0.6990740740740741, + "FN": 13, + "FP": 117, + "IoU": 0.5373665480427047, + "TN": 1319, + "TP": 151, + "n_pred": 268, + "n_ref": 164 + }, + "3": { + "Dice": 0.911660777385159, + "FN": 19, + "FP": 6, + "IoU": 0.8376623376623377, + "TN": 1446, + "TP": 129, + "n_pred": 135, + "n_ref": 148 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.65625, + "FN": 19, + "FP": 3, + "IoU": 0.4883720930232558, + "TN": 2357, + "TP": 21, + "n_pred": 24, + "n_ref": 40 + }, + "2": { + "Dice": 0.9105691056910569, + "FN": 19, + "FP": 36, + "IoU": 0.835820895522388, + "TN": 2065, + "TP": 280, + "n_pred": 316, + "n_ref": 299 + }, + "3": { + "Dice": 0.9678407350689127, + "FN": 19, + "FP": 2, + "IoU": 0.9376854599406528, + "TN": 2063, + "TP": 316, + "n_pred": 318, + "n_ref": 335 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9695973705834018, + "FN": 7, + "FP": 30, + "IoU": 0.9409888357256778, + "TN": 973, + "TP": 590, + "n_pred": 620, + "n_ref": 597 + }, + "2": { + "Dice": 0.9336691855583543, + "FN": 59, + "FP": 20, + "IoU": 0.8755905511811024, + "TN": 965, + "TP": 556, + "n_pred": 576, + "n_ref": 615 + }, + "3": { + "Dice": 0.9413265306122449, + "FN": 17, + "FP": 29, + "IoU": 0.8891566265060241, + "TN": 1185, + "TP": 369, + "n_pred": 398, + "n_ref": 386 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8056155507559395, + "FN": 127, + "FP": 53, + "IoU": 0.674502712477396, + "TN": 1847, + "TP": 373, + "n_pred": 426, + "n_ref": 500 + }, + "2": { + "Dice": 0.9512328767123288, + "FN": 58, + "FP": 31, + "IoU": 0.9070010449320794, + "TN": 1443, + "TP": 868, + "n_pred": 899, + "n_ref": 926 + }, + "3": { + "Dice": 0.9726651480637813, + "FN": 15, + "FP": 9, + "IoU": 0.9467849223946785, + "TN": 1949, + "TP": 427, + "n_pred": 436, + "n_ref": 442 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8247011952191236, + "FN": 83, + "FP": 5, + "IoU": 0.7016949152542373, + "TN": 2105, + "TP": 207, + "n_pred": 212, + "n_ref": 290 + }, + "3": { + "Dice": 0.9799139167862266, + "FN": 5, + "FP": 23, + "IoU": 0.960618846694796, + "TN": 1689, + "TP": 683, + "n_pred": 706, + "n_ref": 688 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8178913738019169, + "FN": 1, + "FP": 56, + "IoU": 0.6918918918918919, + "TN": 1415, + "TP": 128, + "n_pred": 184, + "n_ref": 129 + }, + "2": { + "Dice": 0.8866666666666667, + "FN": 20, + "FP": 14, + "IoU": 0.7964071856287425, + "TN": 1433, + "TP": 133, + "n_pred": 147, + "n_ref": 153 + }, + "3": { + "Dice": 0.6666666666666666, + "FN": 1, + "FP": 1, + "IoU": 0.5, + "TN": 1596, + "TP": 2, + "n_pred": 3, + "n_ref": 3 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9006968641114983, + "FN": 93, + "FP": 21, + "IoU": 0.8193343898573693, + "TN": 169, + "TP": 517, + "n_pred": 538, + "n_ref": 610 + }, + "2": { + "Dice": 0.8733850129198967, + "FN": 21, + "FP": 28, + "IoU": 0.7752293577981652, + "TN": 582, + "TP": 169, + "n_pred": 197, + "n_ref": 190 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5919003115264797, + "FN": 12, + "FP": 250, + "IoU": 0.42035398230088494, + "TN": 1948, + "TP": 190, + "n_pred": 440, + "n_ref": 202 + }, + "2": { + "Dice": 0.9768009768009768, + "FN": 16, + "FP": 3, + "IoU": 0.954653937947494, + "TN": 1981, + "TP": 400, + "n_pred": 403, + "n_ref": 416 + }, + "3": { + "Dice": 0.8, + "FN": 2, + "FP": 0, + "IoU": 0.6666666666666666, + "TN": 2394, + "TP": 4, + "n_pred": 4, + "n_ref": 6 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8900949796472184, + "FN": 98, + "FP": 64, + "IoU": 0.8019559902200489, + "TN": 1582, + "TP": 656, + "n_pred": 720, + "n_ref": 754 + }, + "3": { + "Dice": 0.9174311926605505, + "FN": 64, + "FP": 8, + "IoU": 0.847457627118644, + "TN": 1928, + "TP": 400, + "n_pred": 408, + "n_ref": 464 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8208955223880597, + "FN": 65, + "FP": 7, + "IoU": 0.6962025316455697, + "TN": 563, + "TP": 165, + "n_pred": 172, + "n_ref": 230 + }, + "3": { + "Dice": 0.9866412213740458, + "FN": 7, + "FP": 7, + "IoU": 0.9736346516007532, + "TN": 269, + "TP": 517, + "n_pred": 524, + "n_ref": 524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8711180124223602, + "FN": 100, + "FP": 66, + "IoU": 0.7716643741403026, + "TN": 1673, + "TP": 561, + "n_pred": 627, + "n_ref": 661 + }, + "2": { + "Dice": 0.9011105235325225, + "FN": 157, + "FP": 30, + "IoU": 0.8200192492781521, + "TN": 1361, + "TP": 852, + "n_pred": 882, + "n_ref": 1009 + }, + "3": { + "Dice": 0.9371633752244165, + "FN": 20, + "FP": 15, + "IoU": 0.8817567567567568, + "TN": 2104, + "TP": 261, + "n_pred": 276, + "n_ref": 281 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8117553613979349, + "FN": 61, + "FP": 176, + "IoU": 0.6831550802139037, + "TN": 852, + "TP": 511, + "n_pred": 687, + "n_ref": 572 + }, + "2": { + "Dice": 0.32592592592592595, + "FN": 182, + "FP": 0, + "IoU": 0.19469026548672566, + "TN": 1374, + "TP": 44, + "n_pred": 44, + "n_ref": 226 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8670520231213873, + "FN": 4, + "FP": 42, + "IoU": 0.7653061224489796, + "TN": 2204, + "TP": 150, + "n_pred": 192, + "n_ref": 154 + }, + "2": { + "Dice": 0.8114901256732495, + "FN": 102, + "FP": 3, + "IoU": 0.6827794561933535, + "TN": 2069, + "TP": 226, + "n_pred": 229, + "n_ref": 328 + }, + "3": { + "Dice": 0.9552429667519181, + "FN": 1, + "FP": 69, + "IoU": 0.9143206854345165, + "TN": 1583, + "TP": 747, + "n_pred": 816, + "n_ref": 748 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7828418230563002, + "FN": 32, + "FP": 49, + "IoU": 0.6431718061674009, + "TN": 2173, + "TP": 146, + "n_pred": 195, + "n_ref": 178 + }, + "2": { + "Dice": 0.927400468384075, + "FN": 14, + "FP": 17, + "IoU": 0.8646288209606987, + "TN": 2171, + "TP": 198, + "n_pred": 215, + "n_ref": 212 + }, + "3": { + "Dice": 0.9122807017543859, + "FN": 0, + "FP": 10, + "IoU": 0.8387096774193549, + "TN": 2338, + "TP": 52, + "n_pred": 62, + "n_ref": 52 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 146, + "FP": 0, + "IoU": 0.0, + "TN": 3054, + "TP": 0, + "n_pred": 0, + "n_ref": 146 + }, + "2": { + "Dice": 0.8846487424111015, + "FN": 62, + "FP": 71, + "IoU": 0.7931570762052877, + "TN": 2557, + "TP": 510, + "n_pred": 581, + "n_ref": 572 + }, + "3": { + "Dice": 0.9616071428571429, + "FN": 54, + "FP": 32, + "IoU": 0.9260533104041273, + "TN": 2037, + "TP": 1077, + "n_pred": 1109, + "n_ref": 1131 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9466484268125855, + "FN": 112, + "FP": 5, + "IoU": 0.8987012987012987, + "TN": 445, + "TP": 1038, + "n_pred": 1043, + "n_ref": 1150 + }, + "2": { + "Dice": 0.8538011695906432, + "FN": 2, + "FP": 48, + "IoU": 0.7448979591836735, + "TN": 1404, + "TP": 146, + "n_pred": 194, + "n_ref": 148 + }, + "3": { + "Dice": 0.972972972972973, + "FN": 4, + "FP": 2, + "IoU": 0.9473684210526315, + "TN": 1486, + "TP": 108, + "n_pred": 110, + "n_ref": 112 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 1599, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": 0.9023383768913342, + "FN": 20, + "FP": 51, + "IoU": 0.8220551378446115, + "TN": 1201, + "TP": 328, + "n_pred": 379, + "n_ref": 348 + }, + "3": { + "Dice": 0.979456593770709, + "FN": 27, + "FP": 4, + "IoU": 0.9597402597402598, + "TN": 830, + "TP": 739, + "n_pred": 743, + "n_ref": 766 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9170305676855895, + "FN": 5, + "FP": 14, + "IoU": 0.8467741935483871, + "TN": 1476, + "TP": 105, + "n_pred": 119, + "n_ref": 110 + }, + "2": { + "Dice": 0.8670886075949367, + "FN": 8, + "FP": 76, + "IoU": 0.7653631284916201, + "TN": 1242, + "TP": 274, + "n_pred": 350, + "n_ref": 282 + }, + "3": { + "Dice": 0.8186046511627907, + "FN": 31, + "FP": 8, + "IoU": 0.6929133858267716, + "TN": 1473, + "TP": 88, + "n_pred": 96, + "n_ref": 119 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8679775280898876, + "FN": 41, + "FP": 53, + "IoU": 0.7667493796526055, + "TN": 1197, + "TP": 309, + "n_pred": 362, + "n_ref": 350 + }, + "2": { + "Dice": 0.8666666666666667, + "FN": 4, + "FP": 4, + "IoU": 0.7647058823529411, + "TN": 1566, + "TP": 26, + "n_pred": 30, + "n_ref": 30 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9308641975308642, + "FN": 47, + "FP": 9, + "IoU": 0.8706697459584296, + "TN": 1167, + "TP": 377, + "n_pred": 386, + "n_ref": 424 + }, + "3": { + "Dice": 0.9796251018744906, + "FN": 5, + "FP": 20, + "IoU": 0.9600638977635783, + "TN": 974, + "TP": 601, + "n_pred": 621, + "n_ref": 606 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9204545454545454, + "FN": 0, + "FP": 28, + "IoU": 0.8526315789473684, + "TN": 2210, + "TP": 162, + "n_pred": 190, + "n_ref": 162 + }, + "2": { + "Dice": 0.9269406392694064, + "FN": 31, + "FP": 1, + "IoU": 0.8638297872340426, + "TN": 2165, + "TP": 203, + "n_pred": 204, + "n_ref": 234 + }, + "3": { + "Dice": 0.9649595687331537, + "FN": 0, + "FP": 13, + "IoU": 0.9322916666666666, + "TN": 2208, + "TP": 179, + "n_pred": 192, + "n_ref": 179 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9019607843137255, + "FN": 4, + "FP": 11, + "IoU": 0.8214285714285714, + "TN": 716, + "TP": 69, + "n_pred": 80, + "n_ref": 73 + }, + "2": { + "Dice": 0.9084745762711864, + "FN": 30, + "FP": 24, + "IoU": 0.8322981366459627, + "TN": 478, + "TP": 268, + "n_pred": 292, + "n_ref": 298 + }, + "3": { + "Dice": 0.9586466165413534, + "FN": 14, + "FP": 8, + "IoU": 0.9205776173285198, + "TN": 523, + "TP": 255, + "n_pred": 263, + "n_ref": 269 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9377049180327869, + "FN": 11, + "FP": 8, + "IoU": 0.8827160493827161, + "TN": 1438, + "TP": 143, + "n_pred": 151, + "n_ref": 154 + }, + "3": { + "Dice": 0.9860031104199067, + "FN": 7, + "FP": 11, + "IoU": 0.9723926380368099, + "TN": 948, + "TP": 634, + "n_pred": 645, + "n_ref": 641 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9731182795698925, + "FN": 17, + "FP": 3, + "IoU": 0.9476439790575916, + "TN": 418, + "TP": 362, + "n_pred": 365, + "n_ref": 379 + }, + "2": { + "Dice": 0.9523809523809523, + "FN": 11, + "FP": 8, + "IoU": 0.9090909090909091, + "TN": 591, + "TP": 190, + "n_pred": 198, + "n_ref": 201 + }, + "3": { + "Dice": 0.9694915254237289, + "FN": 2, + "FP": 7, + "IoU": 0.9407894736842105, + "TN": 648, + "TP": 143, + "n_pred": 150, + "n_ref": 145 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2866189/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.7887973782394877, + "FN": 31.17204585537919, + "FP": 31.561640211640206, + "IoU": 0.710655685576633, + "TN": 1297.4984126984127, + "TP": 217.5456790123457, + "n_pred": 249.10731922398585, + "n_ref": 248.71772486772488 + }, + "mean": { + "1": { + "Dice": 0.6822986906236455, + "FN": 35.11825396825397, + "FP": 35.30873015873016, + "IoU": 0.6004333038432751, + "TN": 1351.7515873015873, + "TP": 155.59920634920633, + "n_pred": 190.90793650793654, + "n_ref": 190.71746031746028 + }, + "2": { + "Dice": 0.8096887174045229, + "FN": 39.50661375661376, + "FP": 33.77777777777778, + "IoU": 0.7165965670767684, + "TN": 1269.8126984126984, + "TP": 234.68068783068784, + "n_pred": 268.45846560846564, + "n_ref": 274.18730158730165 + }, + "3": { + "Dice": 0.874404726690295, + "FN": 18.891269841269843, + "FP": 25.5984126984127, + "IoU": 0.8149371858098549, + "TN": 1270.9309523809522, + "TP": 262.35714285714283, + "n_pred": 287.9555555555556, + "n_ref": 281.2484126984127 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_003/summary.json b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_003/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..9230500dd3ff7f8b7b9d09e87042d606e79ebd79 --- /dev/null +++ b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_003/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8547055463516852, + "FN": 1014.5733333333334, + "FP": 1573.96, + "IoU": 0.7583508674103593, + "TN": 842660.5666666668, + "TP": 9179.539999999999, + "n_pred": 10753.5, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.7999244946738435, + "FN": 1294.16, + "FP": 2164.82, + "IoU": 0.6795726021851093, + "TN": 842409.76, + "TP": 8559.9, + "n_pred": 10724.72, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8473222274329966, + "FN": 1247.2, + "FP": 1678.36, + "IoU": 0.7413118308689778, + "TN": 842694.78, + "TP": 8808.3, + "n_pred": 10486.66, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9168699169482154, + "FN": 502.36, + "FP": 878.7, + "IoU": 0.8541681691769908, + "TN": 842877.16, + "TP": 10170.42, + "n_pred": 11049.12, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8547262449973182, + "FN": 1088, + "FP": 2433, + "IoU": 0.7463073708480438, + "TN": 1092041, + "TP": 10358, + "n_pred": 12791, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8494816115632704, + "FN": 879, + "FP": 3578, + "IoU": 0.7383468357402841, + "TN": 1088886, + "TP": 12577, + "n_pred": 16155, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9410255896439091, + "FN": 728, + "FP": 2215, + "IoU": 0.888619763085191, + "TN": 1079497, + "TP": 23480, + "n_pred": 25695, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.734004147784008, + "FN": 100, + "FP": 3363, + "IoU": 0.5797840067952919, + "TN": 1097679, + "TP": 4778, + "n_pred": 8141, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8863454556642668, + "FN": 1576, + "FP": 2118, + "IoU": 0.795889048513648, + "TN": 1087822, + "TP": 14404, + "n_pred": 16522, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9158576880715146, + "FN": 604, + "FP": 2681, + "IoU": 0.8447762604545669, + "TN": 1084757, + "TP": 17878, + "n_pred": 20559, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7698715723707046, + "FN": 1107, + "FP": 3534, + "IoU": 0.6258465011286681, + "TN": 897036, + "TP": 7763, + "n_pred": 11297, + "n_ref": 8870 + }, + "2": { + "Dice": 0.9079983878650203, + "FN": 1395, + "FP": 1116, + "IoU": 0.8314991276338747, + "TN": 894538, + "TP": 12391, + "n_pred": 13507, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9760408852213053, + "FN": 595, + "FP": 427, + "IoU": 0.9532029854846834, + "TN": 887601, + "TP": 20817, + "n_pred": 21244, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6414721931963311, + "FN": 1453, + "FP": 4723, + "IoU": 0.47218186479788055, + "TN": 897739, + "TP": 5525, + "n_pred": 10248, + "n_ref": 6978 + }, + "2": { + "Dice": 0.9006010492304485, + "FN": 1363, + "FP": 1498, + "IoU": 0.8191758311212236, + "TN": 893618, + "TP": 12961, + "n_pred": 14459, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9739608604237425, + "FN": 568, + "FP": 398, + "IoU": 0.9492433795712484, + "TN": 890408, + "TP": 18066, + "n_pred": 18464, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8939760075947182, + "FN": 3461, + "FP": 1453, + "IoU": 0.8082790371035075, + "TN": 1400129, + "TP": 20717, + "n_pred": 22170, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8030077817609513, + "FN": 1308, + "FP": 5451, + "IoU": 0.6708546384222059, + "TN": 1405225, + "TP": 13776, + "n_pred": 19227, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9564275629992071, + "FN": 549, + "FP": 1704, + "IoU": 0.9164936990363232, + "TN": 1398780, + "TP": 24727, + "n_pred": 26431, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8693945585546833, + "FN": 1381, + "FP": 3477, + "IoU": 0.7689637133209682, + "TN": 1404733, + "TP": 16169, + "n_pred": 19646, + "n_ref": 17550 + }, + "2": { + "Dice": 0.7948739806211462, + "FN": 1081, + "FP": 6138, + "IoU": 0.6595774780722437, + "TN": 1404554, + "TP": 13987, + "n_pred": 20125, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9323237908885958, + "FN": 782, + "FP": 2400, + "IoU": 0.8732270916334661, + "TN": 1400660, + "TP": 21918, + "n_pred": 24318, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7589322381930185, + "FN": 2790, + "FP": 1319, + "IoU": 0.6115155526141628, + "TN": 751471, + "TP": 6468, + "n_pred": 7787, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8700840510532324, + "FN": 1025, + "FP": 1479, + "IoU": 0.7700431628248692, + "TN": 751159, + "TP": 8385, + "n_pred": 9864, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9698827544796638, + "FN": 671, + "FP": 282, + "IoU": 0.9415265676770156, + "TN": 745750, + "TP": 15345, + "n_pred": 15627, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6659647275598842, + "FN": 1123, + "FP": 2684, + "IoU": 0.4992107340173639, + "TN": 754446, + "TP": 3795, + "n_pred": 6479, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8570129161360742, + "FN": 1816, + "FP": 1328, + "IoU": 0.749801050453605, + "TN": 749482, + "TP": 9422, + "n_pred": 10750, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9465494505494505, + "FN": 1145, + "FP": 71, + "IoU": 0.898522907452224, + "TN": 750065, + "TP": 10767, + "n_pred": 10838, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8452925792742726, + "FN": 3501, + "FP": 285, + "IoU": 0.7320404841106943, + "TN": 1064143, + "TP": 10343, + "n_pred": 10628, + "n_ref": 13844 + }, + "2": { + "Dice": 0.861658903973838, + "FN": 1175, + "FP": 1617, + "IoU": 0.7569426308000349, + "TN": 1066785, + "TP": 8695, + "n_pred": 10312, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9337697452682511, + "FN": 2000, + "FP": 327, + "IoU": 0.8757674443436015, + "TN": 1059541, + "TP": 16404, + "n_pred": 16731, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8793554719450352, + "FN": 2545, + "FP": 405, + "IoU": 0.7846872491059047, + "TN": 1064571, + "TP": 10751, + "n_pred": 11156, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8698252499766377, + "FN": 1492, + "FP": 1294, + "IoU": 0.7696378369439392, + "TN": 1066178, + "TP": 9308, + "n_pred": 10602, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9384682890606542, + "FN": 1324, + "FP": 499, + "IoU": 0.8840699523052464, + "TN": 1062547, + "TP": 13902, + "n_pred": 14401, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7182685644224106, + "FN": 2395, + "FP": 2890, + "IoU": 0.5603892863084345, + "TN": 1093898, + "TP": 6737, + "n_pred": 9627, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8475764535235102, + "FN": 964, + "FP": 2819, + "IoU": 0.7354730438430879, + "TN": 1091619, + "TP": 10518, + "n_pred": 13337, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9041968890193284, + "FN": 713, + "FP": 1572, + "IoU": 0.8251453933272115, + "TN": 1092852, + "TP": 10783, + "n_pred": 12355, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5905464936301941, + "FN": 572, + "FP": 2867, + "IoU": 0.41898969420510224, + "TN": 1100001, + "TP": 2480, + "n_pred": 5347, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8497638939338903, + "FN": 655, + "FP": 3481, + "IoU": 0.7387734478620602, + "TN": 1090087, + "TP": 11697, + "n_pred": 15178, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7674848896015789, + "FN": 169, + "FP": 1716, + "IoU": 0.6226981585268214, + "TN": 1100924, + "TP": 3111, + "n_pred": 4827, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8886824416634789, + "FN": 1033, + "FP": 1004, + "IoU": 0.7996656176239182, + "TN": 1136712, + "TP": 8131, + "n_pred": 9135, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9081700858655972, + "FN": 1753, + "FP": 1819, + "IoU": 0.8317871438662585, + "TN": 1125645, + "TP": 17663, + "n_pred": 19482, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9416709555669927, + "FN": 952, + "FP": 408, + "IoU": 0.889771437834333, + "TN": 1134542, + "TP": 10978, + "n_pred": 11386, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6838911724407908, + "FN": 719, + "FP": 896, + "IoU": 0.5196311719214753, + "TN": 1143518, + "TP": 1747, + "n_pred": 2643, + "n_ref": 2466 + }, + "2": { + "Dice": 0.7212170104874956, + "FN": 8791, + "FP": 3304, + "IoU": 0.5639870223503965, + "TN": 1119140, + "TP": 15645, + "n_pred": 18949, + "n_ref": 24436 + }, + "3": { + "Dice": 0.4839737582005623, + "FN": 134, + "FP": 5372, + "IoU": 0.3192383778437191, + "TN": 1138792, + "TP": 2582, + "n_pred": 7954, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9477008262317774, + "FN": 892, + "FP": 317, + "IoU": 0.9006001808764285, + "TN": 788637, + "TP": 10954, + "n_pred": 11271, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8835129557440954, + "FN": 928, + "FP": 1104, + "IoU": 0.7913329225713699, + "TN": 791062, + "TP": 7706, + "n_pred": 8810, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9579802050613406, + "FN": 571, + "FP": 138, + "IoU": 0.9193493345466954, + "TN": 792009, + "TP": 8082, + "n_pred": 8220, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6120763805264063, + "FN": 381, + "FP": 4129, + "IoU": 0.4410014873574616, + "TN": 792732, + "TP": 3558, + "n_pred": 7687, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9019686460045708, + "FN": 1404, + "FP": 1041, + "IoU": 0.8214416125027386, + "TN": 787107, + "TP": 11248, + "n_pred": 12289, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8868988391376451, + "FN": 172, + "FP": 510, + "IoU": 0.7967818831942789, + "TN": 797444, + "TP": 2674, + "n_pred": 3184, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9477585845163997, + "FN": 640, + "FP": 854, + "IoU": 0.9007045061810448, + "TN": 1332794, + "TP": 13552, + "n_pred": 14406, + "n_ref": 14192 + }, + "2": { + "Dice": 0.873287990310258, + "FN": 1233, + "FP": 1487, + "IoU": 0.7750764905317126, + "TN": 1335747, + "TP": 9373, + "n_pred": 10860, + "n_ref": 10606 + }, + "3": { + "Dice": 0.96816937923088, + "FN": 523, + "FP": 582, + "IoU": 0.9383026242322725, + "TN": 1329930, + "TP": 16805, + "n_pred": 17387, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7046912338070683, + "FN": 265, + "FP": 4431, + "IoU": 0.5440334013010972, + "TN": 1337541, + "TP": 5603, + "n_pred": 10034, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8792858592006492, + "FN": 1279, + "FP": 1696, + "IoU": 0.7845763939174512, + "TN": 1334030, + "TP": 10835, + "n_pred": 12531, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9118870849310599, + "FN": 441, + "FP": 1719, + "IoU": 0.8380445377521182, + "TN": 1334503, + "TP": 11177, + "n_pred": 12896, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8473817474588089, + "FN": 916, + "FP": 3243, + "IoU": 0.7351798790194206, + "TN": 836263, + "TP": 11546, + "n_pred": 14789, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8595083043061235, + "FN": 935, + "FP": 1848, + "IoU": 0.7536296033994334, + "TN": 840672, + "TP": 8513, + "n_pred": 10361, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9680997089990666, + "FN": 856, + "FP": 306, + "IoU": 0.9381717569437055, + "TN": 833174, + "TP": 17632, + "n_pred": 17938, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8170817593956079, + "FN": 557, + "FP": 2300, + "IoU": 0.6907339250920113, + "TN": 842730, + "TP": 6381, + "n_pred": 8681, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8834638008049179, + "FN": 1304, + "FP": 1331, + "IoU": 0.7912540600491167, + "TN": 839345, + "TP": 9988, + "n_pred": 11319, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9573709502402729, + "FN": 644, + "FP": 456, + "IoU": 0.9182277728218852, + "TN": 838516, + "TP": 12352, + "n_pred": 12808, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7787154659323088, + "FN": 1473, + "FP": 1018, + "IoU": 0.6376200174570846, + "TN": 845094, + "TP": 4383, + "n_pred": 5401, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8815000447507384, + "FN": 871, + "FP": 1777, + "IoU": 0.7881091461950869, + "TN": 839471, + "TP": 9849, + "n_pred": 11626, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9433185304804199, + "FN": 1273, + "FP": 131, + "IoU": 0.8927179643921449, + "TN": 838881, + "TP": 11683, + "n_pred": 11814, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5861905514299257, + "FN": 249, + "FP": 2370, + "IoU": 0.4146177916852928, + "TN": 847494, + "TP": 1855, + "n_pred": 4225, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8958138081849422, + "FN": 1116, + "FP": 1552, + "IoU": 0.8112887254208516, + "TN": 837830, + "TP": 11470, + "n_pred": 13022, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9479610987886026, + "FN": 412, + "FP": 503, + "IoU": 0.9010703859876743, + "TN": 842719, + "TP": 8334, + "n_pred": 8837, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8343131373725255, + "FN": 2657, + "FP": 1486, + "IoU": 0.7157266364759161, + "TN": 782466, + "TP": 10431, + "n_pred": 11917, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8323266876904164, + "FN": 1068, + "FP": 2069, + "IoU": 0.7128078366749062, + "TN": 786117, + "TP": 7786, + "n_pred": 9855, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9333630488076666, + "FN": 894, + "FP": 900, + "IoU": 0.8750522356874216, + "TN": 782682, + "TP": 12564, + "n_pred": 13464, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7348799158534447, + "FN": 1380, + "FP": 3157, + "IoU": 0.5808775981524249, + "TN": 786215, + "TP": 6288, + "n_pred": 9445, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8459890965732088, + "FN": 932, + "FP": 2232, + "IoU": 0.733085878184579, + "TN": 785186, + "TP": 8690, + "n_pred": 10922, + "n_ref": 9622 + }, + "3": { + "Dice": 0.8688591983556012, + "FN": 578, + "FP": 1974, + "IoU": 0.7681264764673814, + "TN": 786034, + "TP": 8454, + "n_pred": 10428, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9054970187045659, + "FN": 1382, + "FP": 932, + "IoU": 0.8273134328358209, + "TN": 883270, + "TP": 11086, + "n_pred": 12018, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8467379077615298, + "FN": 1305, + "FP": 1965, + "IoU": 0.734211168007803, + "TN": 884367, + "TP": 9033, + "n_pred": 10998, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9489877251713693, + "FN": 346, + "FP": 934, + "IoU": 0.9029273471864099, + "TN": 883484, + "TP": 11906, + "n_pred": 12840, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7486456400742115, + "FN": 1312, + "FP": 2075, + "IoU": 0.598268295575851, + "TN": 888239, + "TP": 5044, + "n_pred": 7119, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8850841310673471, + "FN": 1024, + "FP": 1701, + "IoU": 0.7938573265753839, + "TN": 883451, + "TP": 10494, + "n_pred": 12195, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9425742574257425, + "FN": 496, + "FP": 519, + "IoU": 0.8913857677902621, + "TN": 887325, + "TP": 8330, + "n_pred": 8849, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.959734552954892, + "FN": 518, + "FP": 380, + "IoU": 0.9225862068965517, + "TN": 750448, + "TP": 10702, + "n_pred": 11082, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9273386511965193, + "FN": 821, + "FP": 682, + "IoU": 0.8645213628988643, + "TN": 750954, + "TP": 9591, + "n_pred": 10273, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9746540853890746, + "FN": 235, + "FP": 364, + "IoU": 0.9505612413337735, + "TN": 749932, + "TP": 11517, + "n_pred": 11881, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8268627923800338, + "FN": 363, + "FP": 1073, + "IoU": 0.704830421377184, + "TN": 757183, + "TP": 3429, + "n_pred": 4502, + "n_ref": 3792 + }, + "2": { + "Dice": 0.9095959376763161, + "FN": 1153, + "FP": 930, + "IoU": 0.8341824550230855, + "TN": 749486, + "TP": 10479, + "n_pred": 11409, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9531770101338857, + "FN": 391, + "FP": 242, + "IoU": 0.9105426794799322, + "TN": 754972, + "TP": 6443, + "n_pred": 6685, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8251613935869391, + "FN": 209, + "FP": 3068, + "IoU": 0.70236148955495, + "TN": 984318, + "TP": 7733, + "n_pred": 10801, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8477006846730282, + "FN": 886, + "FP": 1939, + "IoU": 0.7356601478431739, + "TN": 984641, + "TP": 7862, + "n_pred": 9801, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9733191035218783, + "FN": 130, + "FP": 770, + "IoU": 0.9480249480249481, + "TN": 978012, + "TP": 16416, + "n_pred": 17186, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6785673935148571, + "FN": 239, + "FP": 2606, + "IoU": 0.5135088919288646, + "TN": 989480, + "TP": 3003, + "n_pred": 5609, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8180366269165247, + "FN": 651, + "FP": 2767, + "IoU": 0.6920998108278533, + "TN": 984227, + "TP": 7683, + "n_pred": 10450, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9220859437042266, + "FN": 164, + "FP": 1602, + "IoU": 0.8554354944335298, + "TN": 983112, + "TP": 10450, + "n_pred": 12052, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.937671306019293, + "FN": 1153, + "FP": 598, + "IoU": 0.8826564803645623, + "TN": 743094, + "TP": 13171, + "n_pred": 13769, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8997280761386812, + "FN": 871, + "FP": 899, + "IoU": 0.817732468334878, + "TN": 748305, + "TP": 7941, + "n_pred": 8840, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9762920606993623, + "FN": 204, + "FP": 335, + "IoU": 0.9536822205035662, + "TN": 746379, + "TP": 11098, + "n_pred": 11433, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6652779773021118, + "FN": 605, + "FP": 4055, + "IoU": 0.49843934990851363, + "TN": 748725, + "TP": 4631, + "n_pred": 8686, + "n_ref": 5236 + }, + "2": { + "Dice": 0.890230179028133, + "FN": 630, + "FP": 1516, + "IoU": 0.8021755162241888, + "TN": 747168, + "TP": 8702, + "n_pred": 10218, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8369080484179231, + "FN": 251, + "FP": 1285, + "IoU": 0.7195545006390359, + "TN": 752539, + "TP": 3941, + "n_pred": 5226, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9205366357069144, + "FN": 810, + "FP": 422, + "IoU": 0.8527724665391969, + "TN": 630608, + "TP": 7136, + "n_pred": 7558, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8788308237378211, + "FN": 405, + "FP": 963, + "IoU": 0.7838521093379681, + "TN": 632647, + "TP": 4961, + "n_pred": 5924, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9533459995777919, + "FN": 560, + "FP": 103, + "IoU": 0.9108511496571198, + "TN": 631539, + "TP": 6774, + "n_pred": 6877, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6190883800556388, + "FN": 127, + "FP": 3433, + "IoU": 0.4483186114985278, + "TN": 632523, + "TP": 2893, + "n_pred": 6326, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9169335337559636, + "FN": 337, + "FP": 934, + "IoU": 0.8466087376297369, + "TN": 630690, + "TP": 7015, + "n_pred": 7949, + "n_ref": 7352 + }, + "3": { + "Dice": 0.892410635675295, + "FN": 222, + "FP": 389, + "IoU": 0.8057233704292528, + "TN": 635831, + "TP": 2534, + "n_pred": 2923, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9121130414007304, + "FN": 2078, + "FP": 497, + "IoU": 0.8384263035703081, + "TN": 967103, + "TP": 13362, + "n_pred": 13859, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8688589935226706, + "FN": 1177, + "FP": 1455, + "IoU": 0.7681261562857898, + "TN": 971689, + "TP": 8719, + "n_pred": 10174, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9651553781916269, + "FN": 158, + "FP": 785, + "IoU": 0.9326572877240591, + "TN": 969037, + "TP": 13060, + "n_pred": 13845, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8666171003717472, + "FN": 360, + "FP": 1434, + "IoU": 0.7646287063762792, + "TN": 975418, + "TP": 5828, + "n_pred": 7262, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8963568473105258, + "FN": 1074, + "FP": 980, + "IoU": 0.8121799561082663, + "TN": 972104, + "TP": 8882, + "n_pred": 9862, + "n_ref": 9956 + }, + "3": { + "Dice": 0.8839454038157002, + "FN": 129, + "FP": 1410, + "IoU": 0.792027027027027, + "TN": 975640, + "TP": 5861, + "n_pred": 7271, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9399582046723434, + "FN": 1112, + "FP": 813, + "IoU": 0.8867180603778027, + "TN": 1031583, + "TP": 15068, + "n_pred": 15881, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8843672456575682, + "FN": 689, + "FP": 1408, + "IoU": 0.7927046263345195, + "TN": 1038460, + "TP": 8019, + "n_pred": 9427, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9680936995153473, + "FN": 275, + "FP": 515, + "IoU": 0.938160469667319, + "TN": 1035801, + "TP": 11985, + "n_pred": 12500, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.655596944251531, + "FN": 238, + "FP": 5217, + "IoU": 0.48764910303371845, + "TN": 1037929, + "TP": 5192, + "n_pred": 10409, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8755821689953427, + "FN": 1110, + "FP": 1508, + "IoU": 0.778698224852071, + "TN": 1036746, + "TP": 9212, + "n_pred": 10720, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9190471671253677, + "FN": 238, + "FP": 615, + "IoU": 0.8502194907813871, + "TN": 1042881, + "TP": 4842, + "n_pred": 5457, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7428093939660481, + "FN": 2717, + "FP": 3131, + "IoU": 0.5908486671797384, + "TN": 474923, + "TP": 8445, + "n_pred": 11576, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7686411149825784, + "FN": 511, + "FP": 817, + "IoU": 0.624221844934918, + "TN": 485682, + "TP": 2206, + "n_pred": 3023, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9422953622568925, + "FN": 242, + "FP": 298, + "IoU": 0.8908870478884623, + "TN": 484267, + "TP": 4409, + "n_pred": 4707, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7194649331166396, + "FN": 896, + "FP": 3592, + "IoU": 0.5618471151029971, + "TN": 478973, + "TP": 5755, + "n_pred": 9347, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8513349514563107, + "FN": 554, + "FP": 426, + "IoU": 0.7411516111991547, + "TN": 485430, + "TP": 2806, + "n_pred": 3232, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8659531090723751, + "FN": 91, + "FP": 435, + "IoU": 0.7635955056179775, + "TN": 486991, + "TP": 1699, + "n_pred": 2134, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8868743119860131, + "FN": 2180, + "FP": 1314, + "IoU": 0.7967422920302502, + "TN": 463290, + "TP": 13696, + "n_pred": 15010, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7730851825340014, + "FN": 739, + "FP": 1480, + "IoU": 0.6301050175029171, + "TN": 474481, + "TP": 3780, + "n_pred": 5260, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9374591414251471, + "FN": 507, + "FP": 354, + "IoU": 0.8822805578342904, + "TN": 473166, + "TP": 6453, + "n_pred": 6807, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8951402194739593, + "FN": 1333, + "FP": 1075, + "IoU": 0.8101844553050607, + "TN": 467794, + "TP": 10278, + "n_pred": 11353, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8444568038561364, + "FN": 1107, + "FP": 571, + "IoU": 0.7307877426600353, + "TN": 474247, + "TP": 4555, + "n_pred": 5126, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8891489717438555, + "FN": 147, + "FP": 516, + "IoU": 0.800421432871764, + "TN": 477158, + "TP": 2659, + "n_pred": 3175, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8552433247200689, + "FN": 4785, + "FP": 593, + "IoU": 0.7470961674112391, + "TN": 623375, + "TP": 15887, + "n_pred": 16480, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8173066032393249, + "FN": 1850, + "FP": 1376, + "IoU": 0.6910553533805784, + "TN": 634198, + "TP": 7216, + "n_pred": 8592, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9542797958126803, + "FN": 1099, + "FP": 137, + "IoU": 0.9125574814290768, + "TN": 630505, + "TP": 12899, + "n_pred": 13036, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8846153846153846, + "FN": 2452, + "FP": 908, + "IoU": 0.7931034482758621, + "TN": 628400, + "TP": 12880, + "n_pred": 13788, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8732628994783218, + "FN": 2206, + "FP": 685, + "IoU": 0.7750369621041164, + "TN": 631789, + "TP": 9960, + "n_pred": 10645, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9372336303758233, + "FN": 305, + "FP": 667, + "IoU": 0.8818811520233322, + "TN": 636411, + "TP": 7257, + "n_pred": 7924, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8893347460492798, + "FN": 2327, + "FP": 2582, + "IoU": 0.8007225785499715, + "TN": 539846, + "TP": 19725, + "n_pred": 22307, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7556064073226545, + "FN": 1167, + "FP": 969, + "IoU": 0.6072085325487312, + "TN": 559042, + "TP": 3302, + "n_pred": 4271, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9468243199586484, + "FN": 570, + "FP": 253, + "IoU": 0.8990184049079755, + "TN": 556330, + "TP": 7327, + "n_pred": 7580, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6621324953725626, + "FN": 741, + "FP": 7108, + "IoU": 0.4949163449163449, + "TN": 548940, + "TP": 7691, + "n_pred": 14799, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8440681382925108, + "FN": 676, + "FP": 871, + "IoU": 0.7302057900244158, + "TN": 558746, + "TP": 4187, + "n_pred": 5058, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8933112216694307, + "FN": 220, + "FP": 552, + "IoU": 0.8071928071928072, + "TN": 560476, + "TP": 3232, + "n_pred": 3784, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8488682170542635, + "FN": 731, + "FP": 1706, + "IoU": 0.7374205365801099, + "TN": 409599, + "TP": 6844, + "n_pred": 8550, + "n_ref": 7575 + }, + "2": { + "Dice": 0.5678627145085804, + "FN": 1400, + "FP": 816, + "IoU": 0.39651416122004357, + "TN": 415208, + "TP": 1456, + "n_pred": 2272, + "n_ref": 2856 + }, + "3": { + "Dice": 0.8548812664907651, + "FN": 149, + "FP": 1226, + "IoU": 0.7465437788018433, + "TN": 413455, + "TP": 4050, + "n_pred": 5276, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7552645549460273, + "FN": 469, + "FP": 2297, + "IoU": 0.6067671310776229, + "TN": 411846, + "TP": 4268, + "n_pred": 6565, + "n_ref": 4737 + }, + "2": { + "Dice": 0.5269177676986787, + "FN": 1657, + "FP": 742, + "IoU": 0.35769745649263723, + "TN": 415145, + "TP": 1336, + "n_pred": 2078, + "n_ref": 2993 + }, + "3": { + "Dice": 0.7972109238814643, + "FN": 325, + "FP": 722, + "IoU": 0.6628019323671498, + "TN": 415775, + "TP": 2058, + "n_pred": 2780, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9212014393772491, + "FN": 1022, + "FP": 1124, + "IoU": 0.8539142273655548, + "TN": 481820, + "TP": 12544, + "n_pred": 13668, + "n_ref": 13566 + }, + "2": { + "Dice": 0.877252106286455, + "FN": 904, + "FP": 990, + "IoU": 0.7813438005079658, + "TN": 487848, + "TP": 6768, + "n_pred": 7758, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9594387755102041, + "FN": 250, + "FP": 386, + "IoU": 0.9220397156165727, + "TN": 488352, + "TP": 7522, + "n_pred": 7908, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8687793158677497, + "FN": 1871, + "FP": 1570, + "IoU": 0.7680016181229773, + "TN": 481678, + "TP": 11391, + "n_pred": 12961, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8566608493310064, + "FN": 1113, + "FP": 1351, + "IoU": 0.7492622366948204, + "TN": 486683, + "TP": 7363, + "n_pred": 8714, + "n_ref": 8476 + }, + "3": { + "Dice": 0.829921657821582, + "FN": 116, + "FP": 1230, + "IoU": 0.7092872570194384, + "TN": 491880, + "TP": 3284, + "n_pred": 4514, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_003/summary_cross_val.json b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_003/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..4e239241a8af94a82ec7c605845a24d831f2ec5b --- /dev/null +++ b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_003/summary_cross_val.json @@ -0,0 +1,5424 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8431439274086387, + "FN": 33.804597701149426, + "FP": 32.195402298850574, + "IoU": 0.7608014664113399, + "TN": 1546.4597701149426, + "TP": 290.98850574712645, + "n_pred": 323.18390804597703, + "n_ref": 324.7931034482759 + }, + "mean": { + "1": { + "Dice": 0.7485850540787512, + "FN": 17.310344827586206, + "FP": 37.206896551724135, + "IoU": 0.6518053630853615, + "TN": 1699.5172413793102, + "TP": 149.41379310344828, + "n_pred": 186.6206896551724, + "n_ref": 166.72413793103448 + }, + "2": { + "Dice": 0.8691776355486617, + "FN": 59.41379310344828, + "FP": 36.3448275862069, + "IoU": 0.7781977968669632, + "TN": 1474.7241379310344, + "TP": 332.9655172413793, + "n_pred": 369.3103448275862, + "n_ref": 392.37931034482756 + }, + "3": { + "Dice": 0.9116690925985034, + "FN": 24.689655172413794, + "FP": 23.03448275862069, + "IoU": 0.8524012392816948, + "TN": 1465.1379310344828, + "TP": 390.58620689655174, + "n_pred": 413.62068965517244, + "n_ref": 415.2758620689655 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.863013698630137, + "FN": 37, + "FP": 3, + "IoU": 0.7590361445783133, + "TN": 634, + "TP": 126, + "n_pred": 129, + "n_ref": 163 + }, + "2": { + "Dice": 0.9363295880149812, + "FN": 8, + "FP": 26, + "IoU": 0.8802816901408451, + "TN": 516, + "TP": 250, + "n_pred": 276, + "n_ref": 258 + }, + "3": { + "Dice": 0.9237668161434978, + "FN": 17, + "FP": 0, + "IoU": 0.8583333333333333, + "TN": 680, + "TP": 103, + "n_pred": 103, + "n_ref": 120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.925, + "FN": 30, + "FP": 24, + "IoU": 0.8604651162790697, + "TN": 1213, + "TP": 333, + "n_pred": 357, + "n_ref": 363 + }, + "3": { + "Dice": 0.9012345679012346, + "FN": 23, + "FP": 9, + "IoU": 0.8202247191011236, + "TN": 1422, + "TP": 146, + "n_pred": 155, + "n_ref": 169 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9825206991720331, + "FN": 1, + "FP": 18, + "IoU": 0.9656419529837251, + "TN": 1847, + "TP": 534, + "n_pred": 552, + "n_ref": 535 + }, + "2": { + "Dice": 0.9168399168399168, + "FN": 34, + "FP": 46, + "IoU": 0.8464491362763915, + "TN": 1879, + "TP": 441, + "n_pred": 487, + "n_ref": 475 + }, + "3": { + "Dice": 0.9726775956284153, + "FN": 25, + "FP": 0, + "IoU": 0.9468085106382979, + "TN": 1930, + "TP": 445, + "n_pred": 445, + "n_ref": 470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7604327666151468, + "FN": 13, + "FP": 297, + "IoU": 0.6134663341645885, + "TN": 1598, + "TP": 492, + "n_pred": 789, + "n_ref": 505 + }, + "2": { + "Dice": 0.8693009118541033, + "FN": 94, + "FP": 78, + "IoU": 0.7688172043010753, + "TN": 1656, + "TP": 572, + "n_pred": 650, + "n_ref": 666 + }, + "3": { + "Dice": 0.9386363636363636, + "FN": 24, + "FP": 30, + "IoU": 0.8843683083511777, + "TN": 1933, + "TP": 413, + "n_pred": 443, + "n_ref": 437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9853181076672104, + "FN": 0, + "FP": 18, + "IoU": 0.9710610932475884, + "TN": 978, + "TP": 604, + "n_pred": 622, + "n_ref": 604 + }, + "2": { + "Dice": 0.5798816568047337, + "FN": 148, + "FP": 65, + "IoU": 0.4083333333333333, + "TN": 1240, + "TP": 147, + "n_pred": 212, + "n_ref": 295 + }, + "3": { + "Dice": 0.4583333333333333, + "FN": 156, + "FP": 0, + "IoU": 0.2972972972972973, + "TN": 1378, + "TP": 66, + "n_pred": 66, + "n_ref": 222 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9719222462203023, + "FN": 6, + "FP": 7, + "IoU": 0.9453781512605042, + "TN": 1362, + "TP": 225, + "n_pred": 232, + "n_ref": 231 + }, + "2": { + "Dice": 0.9197080291970803, + "FN": 15, + "FP": 18, + "IoU": 0.8513513513513513, + "TN": 1378, + "TP": 189, + "n_pred": 207, + "n_ref": 204 + }, + "3": { + "Dice": 0.9914015477214101, + "FN": 12, + "FP": 8, + "IoU": 0.9829497016197783, + "TN": 427, + "TP": 1153, + "n_pred": 1161, + "n_ref": 1165 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.76010101010101, + "FN": 13, + "FP": 177, + "IoU": 0.6130346232179226, + "TN": 1909, + "TP": 301, + "n_pred": 478, + "n_ref": 314 + }, + "2": { + "Dice": 0.9196787148594378, + "FN": 23, + "FP": 17, + "IoU": 0.8513011152416357, + "TN": 2131, + "TP": 229, + "n_pred": 246, + "n_ref": 252 + }, + "3": { + "Dice": 0.9583333333333334, + "FN": 4, + "FP": 16, + "IoU": 0.92, + "TN": 2150, + "TP": 230, + "n_pred": 246, + "n_ref": 234 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6060606060606061, + "FN": 6, + "FP": 20, + "IoU": 0.43478260869565216, + "TN": 1554, + "TP": 20, + "n_pred": 40, + "n_ref": 26 + }, + "2": { + "Dice": 0.8986232790988736, + "FN": 24, + "FP": 57, + "IoU": 0.8159090909090909, + "TN": 1160, + "TP": 359, + "n_pred": 416, + "n_ref": 383 + }, + "3": { + "Dice": 0.8757763975155279, + "FN": 17, + "FP": 23, + "IoU": 0.7790055248618785, + "TN": 1419, + "TP": 141, + "n_pred": 164, + "n_ref": 158 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9713541666666666, + "FN": 16, + "FP": 6, + "IoU": 0.9443037974683545, + "TN": 2005, + "TP": 373, + "n_pred": 379, + "n_ref": 389 + }, + "3": { + "Dice": 0.9735576923076923, + "FN": 6, + "FP": 16, + "IoU": 0.9484777517564403, + "TN": 1973, + "TP": 405, + "n_pred": 421, + "n_ref": 411 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8049113233287858, + "FN": 143, + "FP": 0, + "IoU": 0.6735159817351598, + "TN": 1962, + "TP": 295, + "n_pred": 295, + "n_ref": 438 + }, + "3": { + "Dice": 0.8350634371395617, + "FN": 0, + "FP": 143, + "IoU": 0.7168316831683168, + "TN": 1895, + "TP": 362, + "n_pred": 505, + "n_ref": 362 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8343558282208589, + "FN": 5, + "FP": 49, + "IoU": 0.7157894736842105, + "TN": 1410, + "TP": 136, + "n_pred": 185, + "n_ref": 141 + }, + "3": { + "Dice": 0.863013698630137, + "FN": 7, + "FP": 13, + "IoU": 0.7590361445783133, + "TN": 1517, + "TP": 63, + "n_pred": 76, + "n_ref": 70 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9169632265717675, + "FN": 103, + "FP": 37, + "IoU": 0.8466593647316539, + "TN": 1487, + "TP": 773, + "n_pred": 810, + "n_ref": 876 + }, + "2": { + "Dice": 0.925, + "FN": 19, + "FP": 35, + "IoU": 0.8604651162790697, + "TN": 2013, + "TP": 333, + "n_pred": 368, + "n_ref": 352 + }, + "3": { + "Dice": 0.9642470205850487, + "FN": 33, + "FP": 0, + "IoU": 0.9309623430962343, + "TN": 1922, + "TP": 445, + "n_pred": 445, + "n_ref": 478 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9017980636237898, + "FN": 102, + "FP": 40, + "IoU": 0.8211586901763224, + "TN": 1606, + "TP": 652, + "n_pred": 692, + "n_ref": 754 + }, + "3": { + "Dice": 0.933920704845815, + "FN": 40, + "FP": 20, + "IoU": 0.8760330578512396, + "TN": 1916, + "TP": 424, + "n_pred": 444, + "n_ref": 464 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6198547215496368, + "FN": 0, + "FP": 157, + "IoU": 0.44912280701754387, + "TN": 2115, + "TP": 128, + "n_pred": 285, + "n_ref": 128 + }, + "2": { + "Dice": 0.7204206836108676, + "FN": 612, + "FP": 26, + "IoU": 0.563013698630137, + "TN": 940, + "TP": 822, + "n_pred": 848, + "n_ref": 1434 + }, + "3": { + "Dice": 0.8168642951251647, + "FN": 134, + "FP": 5, + "IoU": 0.6904231625835189, + "TN": 1951, + "TP": 310, + "n_pred": 315, + "n_ref": 444 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5547703180212014, + "FN": 20, + "FP": 232, + "IoU": 0.38386308068459657, + "TN": 1991, + "TP": 157, + "n_pred": 389, + "n_ref": 177 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.902834008097166, + "FN": 17, + "FP": 31, + "IoU": 0.8228782287822878, + "TN": 1329, + "TP": 223, + "n_pred": 254, + "n_ref": 240 + }, + "3": { + "Dice": 0.963963963963964, + "FN": 0, + "FP": 16, + "IoU": 0.9304347826086956, + "TN": 1370, + "TP": 214, + "n_pred": 230, + "n_ref": 214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.013605442176870748, + "FN": 145, + "FP": 0, + "IoU": 0.00684931506849315, + "TN": 3054, + "TP": 1, + "n_pred": 1, + "n_ref": 146 + }, + "2": { + "Dice": 0.8861646234676007, + "FN": 66, + "FP": 64, + "IoU": 0.7955974842767296, + "TN": 2564, + "TP": 506, + "n_pred": 570, + "n_ref": 572 + }, + "3": { + "Dice": 0.9695632995147773, + "FN": 32, + "FP": 37, + "IoU": 0.9409246575342466, + "TN": 2032, + "TP": 1099, + "n_pred": 1136, + "n_ref": 1131 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8532608695652174, + "FN": 34, + "FP": 74, + "IoU": 0.7440758293838863, + "TN": 1178, + "TP": 314, + "n_pred": 388, + "n_ref": 348 + }, + "3": { + "Dice": 0.9564625850340136, + "FN": 63, + "FP": 1, + "IoU": 0.9165580182529335, + "TN": 833, + "TP": 703, + "n_pred": 704, + "n_ref": 766 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9259259259259259, + "FN": 15, + "FP": 21, + "IoU": 0.8620689655172413, + "TN": 1339, + "TP": 225, + "n_pred": 246, + "n_ref": 240 + }, + "3": { + "Dice": 0.9680672268907563, + "FN": 4, + "FP": 15, + "IoU": 0.9381107491856677, + "TN": 1293, + "TP": 288, + "n_pred": 303, + "n_ref": 292 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7388535031847133, + "FN": 4, + "FP": 78, + "IoU": 0.5858585858585859, + "TN": 2202, + "TP": 116, + "n_pred": 194, + "n_ref": 120 + }, + "2": { + "Dice": 0.9136558481322719, + "FN": 84, + "FP": 57, + "IoU": 0.8410372040586246, + "TN": 1513, + "TP": 746, + "n_pred": 803, + "n_ref": 830 + }, + "3": { + "Dice": 0.9440298507462687, + "FN": 12, + "FP": 48, + "IoU": 0.8939929328621908, + "TN": 1834, + "TP": 506, + "n_pred": 554, + "n_ref": 518 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8, + "FN": 1, + "FP": 6, + "IoU": 0.6666666666666666, + "TN": 779, + "TP": 14, + "n_pred": 20, + "n_ref": 15 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9673202614379085, + "FN": 26, + "FP": 19, + "IoU": 0.9367088607594937, + "TN": 889, + "TP": 666, + "n_pred": 685, + "n_ref": 692 + }, + "3": { + "Dice": 0.9741863075196409, + "FN": 4, + "FP": 19, + "IoU": 0.949671772428884, + "TN": 1143, + "TP": 434, + "n_pred": 453, + "n_ref": 438 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5492957746478874, + "FN": 115, + "FP": 13, + "IoU": 0.3786407766990291, + "TN": 1394, + "TP": 78, + "n_pred": 91, + "n_ref": 193 + }, + "2": { + "Dice": 0.8721649484536083, + "FN": 52, + "FP": 72, + "IoU": 0.773308957952468, + "TN": 1053, + "TP": 423, + "n_pred": 495, + "n_ref": 475 + }, + "3": { + "Dice": 0.9373390557939915, + "FN": 52, + "FP": 21, + "IoU": 0.8820678513731826, + "TN": 981, + "TP": 546, + "n_pred": 567, + "n_ref": 598 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9230769230769231, + "FN": 29, + "FP": 14, + "IoU": 0.8571428571428571, + "TN": 1299, + "TP": 258, + "n_pred": 272, + "n_ref": 287 + }, + "2": { + "Dice": 0.7679083094555874, + "FN": 48, + "FP": 33, + "IoU": 0.6232558139534884, + "TN": 1385, + "TP": 134, + "n_pred": 167, + "n_ref": 182 + }, + "3": { + "Dice": 0.9784615384615385, + "FN": 15, + "FP": 34, + "IoU": 0.9578313253012049, + "TN": 438, + "TP": 1113, + "n_pred": 1147, + "n_ref": 1128 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9285127362366475, + "FN": 14, + "FP": 73, + "IoU": 0.8665644171779141, + "TN": 1748, + "TP": 565, + "n_pred": 638, + "n_ref": 579 + }, + "3": { + "Dice": 0.974739970282318, + "FN": 24, + "FP": 10, + "IoU": 0.9507246376811594, + "TN": 1710, + "TP": 656, + "n_pred": 666, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9433106575963719, + "FN": 48, + "FP": 2, + "IoU": 0.8927038626609443, + "TN": 334, + "TP": 416, + "n_pred": 418, + "n_ref": 464 + }, + "3": { + "Dice": 0.9329446064139941, + "FN": 0, + "FP": 46, + "IoU": 0.8743169398907104, + "TN": 434, + "TP": 320, + "n_pred": 366, + "n_ref": 320 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.872093023255814, + "FN": 18, + "FP": 26, + "IoU": 0.7731958762886598, + "TN": 1406, + "TP": 150, + "n_pred": 176, + "n_ref": 168 + }, + "3": { + "Dice": 0.9766277128547579, + "FN": 12, + "FP": 16, + "IoU": 0.9543230016313213, + "TN": 987, + "TP": 585, + "n_pred": 601, + "n_ref": 597 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient099_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9829867674858223, + "FN": 10, + "FP": 8, + "IoU": 0.966542750929368, + "TN": 1862, + "TP": 520, + "n_pred": 528, + "n_ref": 530 + }, + "2": { + "Dice": 0.7114427860696517, + "FN": 27, + "FP": 89, + "IoU": 0.5521235521235521, + "TN": 2141, + "TP": 143, + "n_pred": 232, + "n_ref": 170 + }, + "3": { + "Dice": 0.7201834862385321, + "FN": 0, + "FP": 122, + "IoU": 0.5627240143369175, + "TN": 2121, + "TP": 157, + "n_pred": 279, + "n_ref": 157 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8324273784204897, + "FN": 39.51724137931035, + "FP": 28.87356321839081, + "IoU": 0.755340413158197, + "TN": 1678.8850574712644, + "TP": 294.10344827586204, + "n_pred": 322.97701149425285, + "n_ref": 333.6206896551724 + }, + "mean": { + "1": { + "Dice": 0.7173082718470074, + "FN": 48.758620689655174, + "FP": 32.13793103448276, + "IoU": 0.6336508453562344, + "TN": 1730.1724137931035, + "TP": 230.31034482758622, + "n_pred": 262.44827586206895, + "n_ref": 279.0689655172414 + }, + "2": { + "Dice": 0.8600619722567966, + "FN": 48.6551724137931, + "FP": 41.41379310344828, + "IoU": 0.7677504837970214, + "TN": 1619.896551724138, + "TP": 331.41379310344826, + "n_pred": 372.82758620689657, + "n_ref": 380.0689655172414 + }, + "3": { + "Dice": 0.9199118911576653, + "FN": 21.137931034482758, + "FP": 13.068965517241379, + "IoU": 0.8646199103213356, + "TN": 1686.5862068965516, + "TP": 320.58620689655174, + "n_pred": 333.6551724137931, + "n_ref": 341.7241379310345 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8911419423692636, + "FN": 41, + "FP": 163, + "IoU": 0.8036573628488932, + "TN": 1361, + "TP": 835, + "n_pred": 998, + "n_ref": 876 + }, + "2": { + "Dice": 0.8860759493670886, + "FN": 10, + "FP": 53, + "IoU": 0.7954545454545454, + "TN": 2092, + "TP": 245, + "n_pred": 298, + "n_ref": 255 + }, + "3": { + "Dice": 0.9736842105263158, + "FN": 3, + "FP": 3, + "IoU": 0.9487179487179487, + "TN": 2283, + "TP": 111, + "n_pred": 114, + "n_ref": 114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6797066014669927, + "FN": 131, + "FP": 0, + "IoU": 0.5148148148148148, + "TN": 2130, + "TP": 139, + "n_pred": 139, + "n_ref": 270 + }, + "2": { + "Dice": 0.9242819843342036, + "FN": 28, + "FP": 30, + "IoU": 0.8592233009708737, + "TN": 1988, + "TP": 354, + "n_pred": 384, + "n_ref": 382 + }, + "3": { + "Dice": 0.8465608465608465, + "FN": 25, + "FP": 4, + "IoU": 0.7339449541284404, + "TN": 2291, + "TP": 80, + "n_pred": 84, + "n_ref": 105 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.46519524617996605, + "FN": 315, + "FP": 0, + "IoU": 0.3030973451327434, + "TN": 2748, + "TP": 137, + "n_pred": 137, + "n_ref": 452 + }, + "2": { + "Dice": 0.8501805054151624, + "FN": 12, + "FP": 154, + "IoU": 0.7394034536891679, + "TN": 2563, + "TP": 471, + "n_pred": 625, + "n_ref": 483 + }, + "3": { + "Dice": 0.9342251950947603, + "FN": 52, + "FP": 7, + "IoU": 0.8765690376569037, + "TN": 2722, + "TP": 419, + "n_pred": 426, + "n_ref": 471 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8495575221238938, + "FN": 0, + "FP": 17, + "IoU": 0.7384615384615385, + "TN": 2335, + "TP": 48, + "n_pred": 65, + "n_ref": 48 + }, + "2": { + "Dice": 0.8861111111111111, + "FN": 37, + "FP": 45, + "IoU": 0.7955112219451371, + "TN": 1999, + "TP": 319, + "n_pred": 364, + "n_ref": 356 + }, + "3": { + "Dice": 0.986272439281943, + "FN": 8, + "FP": 18, + "IoU": 0.9729166666666667, + "TN": 1440, + "TP": 934, + "n_pred": 952, + "n_ref": 942 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9815668202764977, + "FN": 3, + "FP": 5, + "IoU": 0.9638009049773756, + "TN": 579, + "TP": 213, + "n_pred": 218, + "n_ref": 216 + }, + "3": { + "Dice": 0.9941520467836257, + "FN": 5, + "FP": 0, + "IoU": 0.9883720930232558, + "TN": 370, + "TP": 425, + "n_pred": 425, + "n_ref": 430 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8878248974008208, + "FN": 109, + "FP": 55, + "IoU": 0.7982779827798278, + "TN": 2387, + "TP": 649, + "n_pred": 704, + "n_ref": 758 + }, + "2": { + "Dice": 0.9596553074813945, + "FN": 39, + "FP": 64, + "IoU": 0.9224397590361446, + "TN": 1872, + "TP": 1225, + "n_pred": 1289, + "n_ref": 1264 + }, + "3": { + "Dice": 0.9633507853403142, + "FN": 12, + "FP": 23, + "IoU": 0.9292929292929293, + "TN": 2705, + "TP": 460, + "n_pred": 483, + "n_ref": 472 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8905967450271248, + "FN": 166, + "FP": 76, + "IoU": 0.8027709861450693, + "TN": 1973, + "TP": 985, + "n_pred": 1061, + "n_ref": 1151 + }, + "3": { + "Dice": 0.9197261978842564, + "FN": 73, + "FP": 56, + "IoU": 0.8513824884792627, + "TN": 2332, + "TP": 739, + "n_pred": 795, + "n_ref": 812 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8287671232876712, + "FN": 94, + "FP": 6, + "IoU": 0.7076023391812866, + "TN": 2058, + "TP": 242, + "n_pred": 248, + "n_ref": 336 + }, + "3": { + "Dice": 0.84375, + "FN": 6, + "FP": 24, + "IoU": 0.7297297297297297, + "TN": 2289, + "TP": 81, + "n_pred": 105, + "n_ref": 87 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9014778325123153, + "FN": 23, + "FP": 97, + "IoU": 0.820627802690583, + "TN": 931, + "TP": 549, + "n_pred": 646, + "n_ref": 572 + }, + "2": { + "Dice": 0.7122507122507122, + "FN": 101, + "FP": 0, + "IoU": 0.5530973451327433, + "TN": 1374, + "TP": 125, + "n_pred": 125, + "n_ref": 226 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9117174959871589, + "FN": 42, + "FP": 13, + "IoU": 0.8377581120943953, + "TN": 2061, + "TP": 284, + "n_pred": 297, + "n_ref": 326 + }, + "2": { + "Dice": 0.9288956127080181, + "FN": 22, + "FP": 25, + "IoU": 0.867231638418079, + "TN": 2046, + "TP": 307, + "n_pred": 332, + "n_ref": 329 + }, + "3": { + "Dice": 0.9824333116460637, + "FN": 18, + "FP": 9, + "IoU": 0.9654731457800512, + "TN": 1618, + "TP": 755, + "n_pred": 764, + "n_ref": 773 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.884393063583815, + "FN": 1, + "FP": 39, + "IoU": 0.7927461139896373, + "TN": 2207, + "TP": 153, + "n_pred": 192, + "n_ref": 154 + }, + "2": { + "Dice": 0.8512110726643599, + "FN": 82, + "FP": 4, + "IoU": 0.7409638554216867, + "TN": 2068, + "TP": 246, + "n_pred": 250, + "n_ref": 328 + }, + "3": { + "Dice": 0.9601029601029601, + "FN": 2, + "FP": 60, + "IoU": 0.9232673267326733, + "TN": 1592, + "TP": 746, + "n_pred": 806, + "n_ref": 748 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9117647058823529, + "FN": 5, + "FP": 13, + "IoU": 0.8378378378378378, + "TN": 1489, + "TP": 93, + "n_pred": 106, + "n_ref": 98 + }, + "2": { + "Dice": 0.9110512129380054, + "FN": 10, + "FP": 23, + "IoU": 0.8366336633663366, + "TN": 1398, + "TP": 169, + "n_pred": 192, + "n_ref": 179 + }, + "3": { + "Dice": 0.979757085020243, + "FN": 2, + "FP": 3, + "IoU": 0.9603174603174603, + "TN": 1474, + "TP": 121, + "n_pred": 124, + "n_ref": 123 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 70, + "IoU": 0.0, + "TN": 1530, + "TP": 0, + "n_pred": 70, + "n_ref": 0 + }, + "2": { + "Dice": 0.9090909090909091, + "FN": 25, + "FP": 20, + "IoU": 0.8333333333333334, + "TN": 1330, + "TP": 225, + "n_pred": 245, + "n_ref": 250 + }, + "3": { + "Dice": 0.9640287769784173, + "FN": 15, + "FP": 0, + "IoU": 0.9305555555555556, + "TN": 1384, + "TP": 201, + "n_pred": 201, + "n_ref": 216 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 116, + "IoU": 0.0, + "TN": 2284, + "TP": 0, + "n_pred": 116, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9336734693877551, + "FN": 48, + "FP": 30, + "IoU": 0.8755980861244019, + "TN": 1773, + "TP": 549, + "n_pred": 579, + "n_ref": 597 + }, + "3": { + "Dice": 0.9706422018348624, + "FN": 26, + "FP": 6, + "IoU": 0.9429590017825312, + "TN": 1839, + "TP": 529, + "n_pred": 535, + "n_ref": 555 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9676848162903939, + "FN": 57, + "FP": 16, + "IoU": 0.9373927958833619, + "TN": 1234, + "TP": 1093, + "n_pred": 1109, + "n_ref": 1150 + }, + "2": { + "Dice": 0.8842398884239888, + "FN": 22, + "FP": 61, + "IoU": 0.7925, + "TN": 2000, + "TP": 317, + "n_pred": 378, + "n_ref": 339 + }, + "3": { + "Dice": 0.9784172661870504, + "FN": 11, + "FP": 4, + "IoU": 0.9577464788732394, + "TN": 2045, + "TP": 340, + "n_pred": 344, + "n_ref": 351 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 2, + "FP": 0, + "IoU": 0.0, + "TN": 2398, + "TP": 0, + "n_pred": 0, + "n_ref": 2 + }, + "2": { + "Dice": 0.8632580261593341, + "FN": 84, + "FP": 31, + "IoU": 0.7594142259414226, + "TN": 1922, + "TP": 363, + "n_pred": 394, + "n_ref": 447 + }, + "3": { + "Dice": 0.7867298578199052, + "FN": 31, + "FP": 14, + "IoU": 0.6484375, + "TN": 2272, + "TP": 83, + "n_pred": 97, + "n_ref": 114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9225806451612903, + "FN": 48, + "FP": 0, + "IoU": 0.8562874251497006, + "TN": 1266, + "TP": 286, + "n_pred": 286, + "n_ref": 334 + }, + "2": { + "Dice": 0.9237668161434978, + "FN": 16, + "FP": 18, + "IoU": 0.8583333333333333, + "TN": 1360, + "TP": 206, + "n_pred": 224, + "n_ref": 222 + }, + "3": { + "Dice": 0.9704641350210971, + "FN": 4, + "FP": 10, + "IoU": 0.9426229508196722, + "TN": 1356, + "TP": 230, + "n_pred": 240, + "n_ref": 234 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.927070457354759, + "FN": 103, + "FP": 15, + "IoU": 0.8640552995391705, + "TN": 1532, + "TP": 750, + "n_pred": 765, + "n_ref": 853 + }, + "3": { + "Dice": 0.9435069699192957, + "FN": 15, + "FP": 62, + "IoU": 0.8930555555555556, + "TN": 1680, + "TP": 643, + "n_pred": 705, + "n_ref": 658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.790273556231003, + "FN": 0, + "FP": 69, + "IoU": 0.6532663316582915, + "TN": 601, + "TP": 130, + "n_pred": 199, + "n_ref": 130 + }, + "3": { + "Dice": 0.9852507374631269, + "FN": 10, + "FP": 0, + "IoU": 0.9709302325581395, + "TN": 456, + "TP": 334, + "n_pred": 334, + "n_ref": 344 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9707317073170731, + "FN": 6, + "FP": 18, + "IoU": 0.943127962085308, + "TN": 1178, + "TP": 398, + "n_pred": 416, + "n_ref": 404 + }, + "2": { + "Dice": 0.9642301710730948, + "FN": 10, + "FP": 13, + "IoU": 0.9309309309309309, + "TN": 1267, + "TP": 310, + "n_pred": 323, + "n_ref": 320 + }, + "3": { + "Dice": 0.9401709401709402, + "FN": 7, + "FP": 0, + "IoU": 0.8870967741935484, + "TN": 1538, + "TP": 55, + "n_pred": 55, + "n_ref": 62 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7916152897657214, + "FN": 63, + "FP": 275, + "IoU": 0.6551020408163265, + "TN": 620, + "TP": 642, + "n_pred": 917, + "n_ref": 705 + }, + "2": { + "Dice": 0.4444444444444444, + "FN": 9, + "FP": 76, + "IoU": 0.2857142857142857, + "TN": 1481, + "TP": 34, + "n_pred": 110, + "n_ref": 43 + }, + "3": { + "Dice": 0.5102040816326531, + "FN": 0, + "FP": 48, + "IoU": 0.3424657534246575, + "TN": 1527, + "TP": 25, + "n_pred": 73, + "n_ref": 25 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7697478991596639, + "FN": 121, + "FP": 16, + "IoU": 0.6256830601092896, + "TN": 2034, + "TP": 229, + "n_pred": 245, + "n_ref": 350 + }, + "2": { + "Dice": 0.7402422611036339, + "FN": 232, + "FP": 154, + "IoU": 0.5876068376068376, + "TN": 1464, + "TP": 550, + "n_pred": 704, + "n_ref": 782 + }, + "3": { + "Dice": 0.894297635605007, + "FN": 145, + "FP": 7, + "IoU": 0.8088050314465409, + "TN": 1605, + "TP": 643, + "n_pred": 650, + "n_ref": 788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.799755052051439, + "FN": 320, + "FP": 7, + "IoU": 0.6663265306122449, + "TN": 620, + "TP": 653, + "n_pred": 660, + "n_ref": 973 + }, + "2": { + "Dice": 0.8336380255941499, + "FN": 82, + "FP": 9, + "IoU": 0.7147335423197492, + "TN": 1281, + "TP": 228, + "n_pred": 237, + "n_ref": 310 + }, + "3": { + "Dice": 0.8604651162790697, + "FN": 9, + "FP": 3, + "IoU": 0.7551020408163265, + "TN": 1551, + "TP": 37, + "n_pred": 40, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.869475847893114, + "FN": 125, + "FP": 2, + "IoU": 0.769090909090909, + "TN": 2650, + "TP": 423, + "n_pred": 425, + "n_ref": 548 + }, + "2": { + "Dice": 0.7748953974895397, + "FN": 130, + "FP": 139, + "IoU": 0.6325136612021858, + "TN": 2468, + "TP": 463, + "n_pred": 602, + "n_ref": 593 + }, + "3": { + "Dice": 0.9371766444937176, + "FN": 78, + "FP": 7, + "IoU": 0.8817802503477051, + "TN": 2481, + "TP": 634, + "n_pred": 641, + "n_ref": 712 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8717948717948718, + "FN": 5, + "FP": 15, + "IoU": 0.7727272727272727, + "TN": 1512, + "TP": 68, + "n_pred": 83, + "n_ref": 73 + }, + "2": { + "Dice": 0.9020817270624518, + "FN": 46, + "FP": 81, + "IoU": 0.8216292134831461, + "TN": 888, + "TP": 585, + "n_pred": 666, + "n_ref": 631 + }, + "3": { + "Dice": 0.9525159461374911, + "FN": 56, + "FP": 11, + "IoU": 0.9093369418132612, + "TN": 861, + "TP": 672, + "n_pred": 683, + "n_ref": 728 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient090_frame11.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8544394178608408, + "FN": 30.73809523809524, + "FP": 45.44047619047618, + "IoU": 0.7708340201533121, + "TN": 1697.5119047619048, + "TP": 312.0238095238096, + "n_pred": 357.4642857142857, + "n_ref": 342.76190476190476 + }, + "mean": { + "1": { + "Dice": 0.7988903628719201, + "FN": 30.321428571428573, + "FP": 68.5, + "IoU": 0.708162345607871, + "TN": 1717.5714285714287, + "TP": 269.32142857142856, + "n_pred": 337.82142857142856, + "n_ref": 299.64285714285717 + }, + "2": { + "Dice": 0.8686790079094758, + "FN": 40.964285714285715, + "FP": 44.892857142857146, + "IoU": 0.7751385082488217, + "TN": 1685.0714285714287, + "TP": 314.7857142857143, + "n_pred": 359.67857142857144, + "n_ref": 355.75 + }, + "3": { + "Dice": 0.8957488828011265, + "FN": 20.928571428571427, + "FP": 22.928571428571427, + "IoU": 0.8292012066032438, + "TN": 1689.892857142857, + "TP": 351.9642857142857, + "n_pred": 374.89285714285717, + "n_ref": 372.89285714285717 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7023172905525846, + "FN": 163, + "FP": 4, + "IoU": 0.5412087912087912, + "TN": 1236, + "TP": 197, + "n_pred": 201, + "n_ref": 360 + }, + "2": { + "Dice": 0.7777777777777778, + "FN": 31, + "FP": 45, + "IoU": 0.6363636363636364, + "TN": 1391, + "TP": 133, + "n_pred": 178, + "n_ref": 164 + }, + "3": { + "Dice": 0.9071428571428571, + "FN": 21, + "FP": 5, + "IoU": 0.8300653594771242, + "TN": 1447, + "TP": 127, + "n_pred": 132, + "n_ref": 148 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8062234794908062, + "FN": 123, + "FP": 14, + "IoU": 0.6753554502369669, + "TN": 1978, + "TP": 285, + "n_pred": 299, + "n_ref": 408 + }, + "2": { + "Dice": 0.8063872255489022, + "FN": 8, + "FP": 89, + "IoU": 0.6755852842809364, + "TN": 2101, + "TP": 202, + "n_pred": 291, + "n_ref": 210 + }, + "3": { + "Dice": 0.9485294117647058, + "FN": 20, + "FP": 8, + "IoU": 0.9020979020979021, + "TN": 2114, + "TP": 258, + "n_pred": 266, + "n_ref": 278 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 24, + "IoU": 0.0, + "TN": 2376, + "TP": 0, + "n_pred": 24, + "n_ref": 0 + }, + "2": { + "Dice": 0.8940852819807428, + "FN": 23, + "FP": 131, + "IoU": 0.8084577114427861, + "TN": 1596, + "TP": 650, + "n_pred": 781, + "n_ref": 673 + }, + "3": { + "Dice": 0.9776536312849162, + "FN": 43, + "FP": 13, + "IoU": 0.9562841530054644, + "TN": 1119, + "TP": 1225, + "n_pred": 1238, + "n_ref": 1268 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9578256794751641, + "FN": 43, + "FP": 2, + "IoU": 0.9190647482014388, + "TN": 1044, + "TP": 511, + "n_pred": 513, + "n_ref": 554 + }, + "3": { + "Dice": 0.9224952741020794, + "FN": 2, + "FP": 39, + "IoU": 0.856140350877193, + "TN": 1315, + "TP": 244, + "n_pred": 283, + "n_ref": 246 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9509906152241918, + "FN": 32, + "FP": 15, + "IoU": 0.9065606361829026, + "TN": 1097, + "TP": 456, + "n_pred": 471, + "n_ref": 488 + }, + "2": { + "Dice": 0.9224572004028198, + "FN": 44, + "FP": 33, + "IoU": 0.8560747663551402, + "TN": 1065, + "TP": 458, + "n_pred": 491, + "n_ref": 502 + }, + "3": { + "Dice": 0.9737704918032787, + "FN": 6, + "FP": 26, + "IoU": 0.9488817891373802, + "TN": 974, + "TP": 594, + "n_pred": 620, + "n_ref": 600 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8980769230769231, + "FN": 152, + "FP": 60, + "IoU": 0.8150087260034904, + "TN": 1254, + "TP": 934, + "n_pred": 994, + "n_ref": 1086 + }, + "3": { + "Dice": 0.9535791757049892, + "FN": 61, + "FP": 46, + "IoU": 0.9112769485903814, + "TN": 1194, + "TP": 1099, + "n_pred": 1145, + "n_ref": 1160 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7755102040816326, + "FN": 0, + "FP": 22, + "IoU": 0.6333333333333333, + "TN": 3140, + "TP": 38, + "n_pred": 60, + "n_ref": 38 + }, + "2": { + "Dice": 0.8804500703234881, + "FN": 77, + "FP": 8, + "IoU": 0.7864321608040201, + "TN": 2802, + "TP": 313, + "n_pred": 321, + "n_ref": 390 + }, + "3": { + "Dice": 0.9276315789473685, + "FN": 6, + "FP": 38, + "IoU": 0.8650306748466258, + "TN": 2874, + "TP": 282, + "n_pred": 320, + "n_ref": 288 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8927789934354485, + "FN": 38, + "FP": 11, + "IoU": 0.8063241106719368, + "TN": 547, + "TP": 204, + "n_pred": 215, + "n_ref": 242 + }, + "3": { + "Dice": 0.9726775956284153, + "FN": 11, + "FP": 4, + "IoU": 0.9468085106382979, + "TN": 518, + "TP": 267, + "n_pred": 271, + "n_ref": 278 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8827586206896552, + "FN": 1, + "FP": 33, + "IoU": 0.7901234567901234, + "TN": 1438, + "TP": 128, + "n_pred": 161, + "n_ref": 129 + }, + "2": { + "Dice": 0.8974358974358975, + "FN": 13, + "FP": 19, + "IoU": 0.813953488372093, + "TN": 1428, + "TP": 140, + "n_pred": 159, + "n_ref": 153 + }, + "3": { + "Dice": 0.75, + "FN": 0, + "FP": 2, + "IoU": 0.6, + "TN": 1595, + "TP": 3, + "n_pred": 5, + "n_ref": 3 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6083916083916084, + "FN": 83, + "FP": 253, + "IoU": 0.4371859296482412, + "TN": 2603, + "TP": 261, + "n_pred": 514, + "n_ref": 344 + }, + "2": { + "Dice": 0.8682352941176471, + "FN": 75, + "FP": 149, + "IoU": 0.7671517671517671, + "TN": 2238, + "TP": 738, + "n_pred": 887, + "n_ref": 813 + }, + "3": { + "Dice": 0.7620528771384136, + "FN": 78, + "FP": 75, + "IoU": 0.6155778894472361, + "TN": 2802, + "TP": 245, + "n_pred": 320, + "n_ref": 323 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9023255813953488, + "FN": 36, + "FP": 6, + "IoU": 0.8220338983050848, + "TN": 1364, + "TP": 194, + "n_pred": 200, + "n_ref": 230 + }, + "3": { + "Dice": 0.9866666666666667, + "FN": 6, + "FP": 8, + "IoU": 0.9736842105263158, + "TN": 1068, + "TP": 518, + "n_pred": 526, + "n_ref": 524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7956403269754768, + "FN": 3, + "FP": 72, + "IoU": 0.6606334841628959, + "TN": 1379, + "TP": 146, + "n_pred": 218, + "n_ref": 149 + }, + "3": { + "Dice": 0.9487179487179487, + "FN": 59, + "FP": 1, + "IoU": 0.9024390243902439, + "TN": 985, + "TP": 555, + "n_pred": 556, + "n_ref": 614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7161334240980258, + "FN": 8, + "FP": 409, + "IoU": 0.5577942735949099, + "TN": 1457, + "TP": 526, + "n_pred": 935, + "n_ref": 534 + }, + "2": { + "Dice": 0.7733333333333333, + "FN": 16, + "FP": 1, + "IoU": 0.6304347826086957, + "TN": 2354, + "TP": 29, + "n_pred": 30, + "n_ref": 45 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7791563275434243, + "FN": 21, + "FP": 157, + "IoU": 0.6382113821138211, + "TN": 2708, + "TP": 314, + "n_pred": 471, + "n_ref": 335 + }, + "2": { + "Dice": 0.6666666666666666, + "FN": 1, + "FP": 0, + "IoU": 0.5, + "TN": 3198, + "TP": 1, + "n_pred": 1, + "n_ref": 2 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9633507853403142, + "FN": 6, + "FP": 29, + "IoU": 0.9292929292929293, + "TN": 1905, + "TP": 460, + "n_pred": 489, + "n_ref": 466 + }, + "2": { + "Dice": 0.9034267912772586, + "FN": 9, + "FP": 22, + "IoU": 0.8238636363636364, + "TN": 2224, + "TP": 145, + "n_pred": 167, + "n_ref": 154 + }, + "3": { + "Dice": 0.9772905246671887, + "FN": 20, + "FP": 9, + "IoU": 0.9555895865237366, + "TN": 1747, + "TP": 624, + "n_pred": 633, + "n_ref": 644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7792946530147895, + "FN": 48, + "FP": 340, + "IoU": 0.6383970177073626, + "TN": 2127, + "TP": 685, + "n_pred": 1025, + "n_ref": 733 + }, + "2": { + "Dice": 0.6952714535901926, + "FN": 129, + "FP": 219, + "IoU": 0.5328859060402684, + "TN": 2455, + "TP": 397, + "n_pred": 616, + "n_ref": 526 + }, + "3": { + "Dice": 0.8632958801498127, + "FN": 0, + "FP": 146, + "IoU": 0.7594728171334432, + "TN": 2593, + "TP": 461, + "n_pred": 607, + "n_ref": 461 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8254310344827587, + "FN": 48, + "FP": 114, + "IoU": 0.7027522935779816, + "TN": 1855, + "TP": 383, + "n_pred": 497, + "n_ref": 431 + }, + "3": { + "Dice": 0.9234972677595629, + "FN": 107, + "FP": 5, + "IoU": 0.8578680203045685, + "TN": 1612, + "TP": 676, + "n_pred": 681, + "n_ref": 783 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5978090766823161, + "FN": 16, + "FP": 498, + "IoU": 0.4263392857142857, + "TN": 704, + "TP": 382, + "n_pred": 880, + "n_ref": 398 + }, + "2": { + "Dice": 0.8801742919389978, + "FN": 2, + "FP": 53, + "IoU": 0.7859922178988327, + "TN": 1343, + "TP": 202, + "n_pred": 255, + "n_ref": 204 + }, + "3": { + "Dice": 0.835820895522388, + "FN": 22, + "FP": 0, + "IoU": 0.717948717948718, + "TN": 1522, + "TP": 56, + "n_pred": 56, + "n_ref": 78 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.904320987654321, + "FN": 62, + "FP": 0, + "IoU": 0.8253521126760563, + "TN": 2045, + "TP": 293, + "n_pred": 293, + "n_ref": 355 + }, + "3": { + "Dice": 0.391304347826087, + "FN": 0, + "FP": 28, + "IoU": 0.24324324324324326, + "TN": 2363, + "TP": 9, + "n_pred": 37, + "n_ref": 9 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9745649263721553, + "FN": 38, + "FP": 0, + "IoU": 0.9503916449086162, + "TN": 834, + "TP": 728, + "n_pred": 728, + "n_ref": 766 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9287257019438445, + "FN": 23, + "FP": 10, + "IoU": 0.8669354838709677, + "TN": 552, + "TP": 215, + "n_pred": 225, + "n_ref": 238 + }, + "3": { + "Dice": 0.9726872246696036, + "FN": 8, + "FP": 23, + "IoU": 0.9468267581475128, + "TN": 217, + "TP": 552, + "n_pred": 575, + "n_ref": 560 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9535864978902954, + "FN": 17, + "FP": 16, + "IoU": 0.9112903225806451, + "TN": 1228, + "TP": 339, + "n_pred": 355, + "n_ref": 356 + }, + "2": { + "Dice": 0.952054794520548, + "FN": 9, + "FP": 5, + "IoU": 0.9084967320261438, + "TN": 1447, + "TP": 139, + "n_pred": 144, + "n_ref": 148 + }, + "3": { + "Dice": 0.8, + "FN": 3, + "FP": 0, + "IoU": 0.6666666666666666, + "TN": 1591, + "TP": 6, + "n_pred": 6, + "n_ref": 9 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8950276243093923, + "FN": 152, + "FP": 0, + "IoU": 0.81, + "TN": 1600, + "TP": 648, + "n_pred": 648, + "n_ref": 800 + }, + "2": { + "Dice": 0.9438717067583047, + "FN": 38, + "FP": 11, + "IoU": 0.8937093275488069, + "TN": 1939, + "TP": 412, + "n_pred": 423, + "n_ref": 450 + }, + "3": { + "Dice": 0.9285714285714286, + "FN": 9, + "FP": 33, + "IoU": 0.8666666666666667, + "TN": 2085, + "TP": 273, + "n_pred": 306, + "n_ref": 282 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9292337725719864, + "FN": 76, + "FP": 69, + "IoU": 0.8678213309024613, + "TN": 2103, + "TP": 952, + "n_pred": 1021, + "n_ref": 1028 + }, + "2": { + "Dice": 0.9220338983050848, + "FN": 32, + "FP": 60, + "IoU": 0.8553459119496856, + "TN": 2564, + "TP": 544, + "n_pred": 604, + "n_ref": 576 + }, + "3": { + "Dice": 0.9646133682830931, + "FN": 20, + "FP": 7, + "IoU": 0.9316455696202531, + "TN": 2805, + "TP": 368, + "n_pred": 375, + "n_ref": 388 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9504185447520928, + "FN": 56, + "FP": 21, + "IoU": 0.905521472392638, + "TN": 785, + "TP": 738, + "n_pred": 759, + "n_ref": 794 + }, + "2": { + "Dice": 0.9215686274509803, + "FN": 22, + "FP": 10, + "IoU": 0.8545454545454545, + "TN": 1380, + "TP": 188, + "n_pred": 198, + "n_ref": 210 + }, + "3": { + "Dice": 0.9762796504369539, + "FN": 10, + "FP": 9, + "IoU": 0.9536585365853658, + "TN": 1190, + "TP": 391, + "n_pred": 400, + "n_ref": 401 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.972972972972973, + "FN": 8, + "FP": 14, + "IoU": 0.9473684210526315, + "TN": 1982, + "TP": 396, + "n_pred": 410, + "n_ref": 404 + }, + "2": { + "Dice": 0.946852003270646, + "FN": 30, + "FP": 35, + "IoU": 0.8990683229813664, + "TN": 1756, + "TP": 579, + "n_pred": 614, + "n_ref": 609 + }, + "3": { + "Dice": 0.92, + "FN": 8, + "FP": 16, + "IoU": 0.8518518518518519, + "TN": 2238, + "TP": 138, + "n_pred": 154, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9411764705882353, + "FN": 1, + "FP": 0, + "IoU": 0.8888888888888888, + "TN": 791, + "TP": 8, + "n_pred": 8, + "n_ref": 9 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8284466625077979, + "FN": 183, + "FP": 92, + "IoU": 0.7071352502662407, + "TN": 1461, + "TP": 664, + "n_pred": 756, + "n_ref": 847 + }, + "3": { + "Dice": 0.9136950904392764, + "FN": 66, + "FP": 101, + "IoU": 0.8411037107516651, + "TN": 1349, + "TP": 884, + "n_pred": 985, + "n_ref": 950 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient095_frame12.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.8565460651845022, + "FN": 40.297619047619044, + "FP": 37.904761904761905, + "IoU": 0.7769202744790024, + "TN": 1867.202380952381, + "TP": 311.73809523809524, + "n_pred": 349.6428571428571, + "n_ref": 352.0357142857143 + }, + "mean": { + "1": { + "Dice": 0.7874078362195709, + "FN": 72.28571428571429, + "FP": 37.25, + "IoU": 0.6919629232751867, + "TN": 1909.857142857143, + "TP": 237.75, + "n_pred": 275.0, + "n_ref": 310.0357142857143 + }, + "2": { + "Dice": 0.8686513286607057, + "FN": 32.607142857142854, + "FP": 47.714285714285715, + "IoU": 0.7870635407354661, + "TN": 1845.25, + "TP": 331.57142857142856, + "n_pred": 379.2857142857143, + "n_ref": 364.17857142857144 + }, + "3": { + "Dice": 0.9135790306732301, + "FN": 16.0, + "FP": 28.75, + "IoU": 0.8517343594263546, + "TN": 1846.5, + "TP": 365.89285714285717, + "n_pred": 394.64285714285717, + "n_ref": 381.89285714285717 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 2398, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.8695652173913043, + "FN": 5, + "FP": 124, + "IoU": 0.7692307692307693, + "TN": 1841, + "TP": 430, + "n_pred": 554, + "n_ref": 435 + }, + "3": { + "Dice": 0.9731389102072141, + "FN": 31, + "FP": 4, + "IoU": 0.9476831091180867, + "TN": 1731, + "TP": 634, + "n_pred": 638, + "n_ref": 665 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9548762736535662, + "FN": 30, + "FP": 1, + "IoU": 0.9136490250696379, + "TN": 1241, + "TP": 328, + "n_pred": 329, + "n_ref": 358 + }, + "2": { + "Dice": 0.9109947643979057, + "FN": 11, + "FP": 40, + "IoU": 0.8365384615384616, + "TN": 1288, + "TP": 261, + "n_pred": 301, + "n_ref": 272 + }, + "3": { + "Dice": 0.9886480908152735, + "FN": 12, + "FP": 10, + "IoU": 0.9775510204081632, + "TN": 620, + "TP": 958, + "n_pred": 968, + "n_ref": 970 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9613445378151261, + "FN": 25, + "FP": 21, + "IoU": 0.9255663430420712, + "TN": 1782, + "TP": 572, + "n_pred": 593, + "n_ref": 597 + }, + "2": { + "Dice": 0.9499589827727646, + "FN": 36, + "FP": 25, + "IoU": 0.9046875, + "TN": 1760, + "TP": 579, + "n_pred": 604, + "n_ref": 615 + }, + "3": { + "Dice": 0.9557291666666666, + "FN": 19, + "FP": 15, + "IoU": 0.9152119700748129, + "TN": 1999, + "TP": 367, + "n_pred": 382, + "n_ref": 386 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7377173091458806, + "FN": 324, + "FP": 23, + "IoU": 0.5844311377245509, + "TN": 765, + "TP": 488, + "n_pred": 511, + "n_ref": 812 + }, + "2": { + "Dice": 0.9096446700507614, + "FN": 19, + "FP": 70, + "IoU": 0.8342644320297952, + "TN": 1063, + "TP": 448, + "n_pred": 518, + "n_ref": 467 + }, + "3": { + "Dice": 0.9133858267716536, + "FN": 10, + "FP": 1, + "IoU": 0.8405797101449275, + "TN": 1531, + "TP": 58, + "n_pred": 59, + "n_ref": 68 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6314893617021277, + "FN": 187, + "FP": 246, + "IoU": 0.4614427860696517, + "TN": 2396, + "TP": 371, + "n_pred": 617, + "n_ref": 558 + }, + "2": { + "Dice": 0.9389067524115756, + "FN": 18, + "FP": 39, + "IoU": 0.8848484848484849, + "TN": 2705, + "TP": 438, + "n_pred": 477, + "n_ref": 456 + }, + "3": { + "Dice": 0.7058823529411765, + "FN": 0, + "FP": 5, + "IoU": 0.5454545454545454, + "TN": 3189, + "TP": 6, + "n_pred": 11, + "n_ref": 6 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8615384615384616, + "FN": 240, + "FP": 39, + "IoU": 0.7567567567567568, + "TN": 2053, + "TP": 868, + "n_pred": 907, + "n_ref": 1108 + }, + "2": { + "Dice": 0.9271417133706965, + "FN": 125, + "FP": 57, + "IoU": 0.8641791044776119, + "TN": 1860, + "TP": 1158, + "n_pred": 1215, + "n_ref": 1283 + }, + "3": { + "Dice": 0.934640522875817, + "FN": 22, + "FP": 18, + "IoU": 0.8773006134969326, + "TN": 2874, + "TP": 286, + "n_pred": 304, + "n_ref": 308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.530106921778278, + "FN": 834, + "FP": 1, + "IoU": 0.36064318529862177, + "TN": 1894, + "TP": 471, + "n_pred": 472, + "n_ref": 1305 + }, + "2": { + "Dice": 0.9113300492610837, + "FN": 9, + "FP": 27, + "IoU": 0.8371040723981901, + "TN": 2979, + "TP": 185, + "n_pred": 212, + "n_ref": 194 + }, + "3": { + "Dice": 0.9913854989231874, + "FN": 16, + "FP": 8, + "IoU": 0.9829181494661922, + "TN": 1795, + "TP": 1381, + "n_pred": 1389, + "n_ref": 1397 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9297163995067818, + "FN": 11, + "FP": 46, + "IoU": 0.868663594470046, + "TN": 1966, + "TP": 377, + "n_pred": 423, + "n_ref": 388 + }, + "2": { + "Dice": 0.755, + "FN": 106, + "FP": 188, + "IoU": 0.606425702811245, + "TN": 1653, + "TP": 453, + "n_pred": 641, + "n_ref": 559 + }, + "3": { + "Dice": 0.8158273381294964, + "FN": 26, + "FP": 230, + "IoU": 0.6889428918590522, + "TN": 1577, + "TP": 567, + "n_pred": 797, + "n_ref": 593 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5493421052631579, + "FN": 11, + "FP": 263, + "IoU": 0.3786848072562358, + "TN": 2759, + "TP": 167, + "n_pred": 430, + "n_ref": 178 + }, + "2": { + "Dice": 0.9253012048192771, + "FN": 20, + "FP": 11, + "IoU": 0.8609865470852018, + "TN": 2977, + "TP": 192, + "n_pred": 203, + "n_ref": 212 + }, + "3": { + "Dice": 0.8455284552845529, + "FN": 0, + "FP": 19, + "IoU": 0.7323943661971831, + "TN": 3129, + "TP": 52, + "n_pred": 71, + "n_ref": 52 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7521079258010118, + "FN": 70, + "FP": 77, + "IoU": 0.6027027027027027, + "TN": 1230, + "TP": 223, + "n_pred": 300, + "n_ref": 293 + }, + "2": { + "Dice": 0.9104477611940298, + "FN": 55, + "FP": 29, + "IoU": 0.8356164383561644, + "TN": 1089, + "TP": 427, + "n_pred": 456, + "n_ref": 482 + }, + "3": { + "Dice": 0.9633671083398285, + "FN": 17, + "FP": 30, + "IoU": 0.9293233082706767, + "TN": 935, + "TP": 618, + "n_pred": 648, + "n_ref": 635 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8493150684931506, + "FN": 10, + "FP": 34, + "IoU": 0.7380952380952381, + "TN": 2232, + "TP": 124, + "n_pred": 158, + "n_ref": 134 + }, + "2": { + "Dice": 0.9538702111024238, + "FN": 34, + "FP": 25, + "IoU": 0.9118086696562033, + "TN": 1731, + "TP": 610, + "n_pred": 635, + "n_ref": 644 + }, + "3": { + "Dice": 0.8260869565217391, + "FN": 15, + "FP": 9, + "IoU": 0.7037037037037037, + "TN": 2319, + "TP": 57, + "n_pred": 66, + "n_ref": 72 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9001536098310292, + "FN": 65, + "FP": 0, + "IoU": 0.8184357541899442, + "TN": 2842, + "TP": 293, + "n_pred": 293, + "n_ref": 358 + }, + "2": { + "Dice": 0.8990578734858681, + "FN": 64, + "FP": 86, + "IoU": 0.8166259168704156, + "TN": 2382, + "TP": 668, + "n_pred": 754, + "n_ref": 732 + }, + "3": { + "Dice": 0.9471947194719472, + "FN": 11, + "FP": 53, + "IoU": 0.8996865203761756, + "TN": 2562, + "TP": 574, + "n_pred": 627, + "n_ref": 585 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8049792531120332, + "FN": 0, + "FP": 94, + "IoU": 0.6736111111111112, + "TN": 1312, + "TP": 194, + "n_pred": 288, + "n_ref": 194 + }, + "3": { + "Dice": 0.960960960960961, + "FN": 26, + "FP": 0, + "IoU": 0.9248554913294798, + "TN": 1254, + "TP": 320, + "n_pred": 320, + "n_ref": 346 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8991596638655462, + "FN": 6, + "FP": 42, + "IoU": 0.816793893129771, + "TN": 2138, + "TP": 214, + "n_pred": 256, + "n_ref": 220 + }, + "2": { + "Dice": 0.9007633587786259, + "FN": 7, + "FP": 110, + "IoU": 0.8194444444444444, + "TN": 1752, + "TP": 531, + "n_pred": 641, + "n_ref": 538 + }, + "3": { + "Dice": 0.8206686930091185, + "FN": 52, + "FP": 7, + "IoU": 0.6958762886597938, + "TN": 2206, + "TP": 135, + "n_pred": 142, + "n_ref": 187 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9136276391554703, + "FN": 34, + "FP": 11, + "IoU": 0.8409893992932862, + "TN": 1317, + "TP": 238, + "n_pred": 249, + "n_ref": 272 + }, + "2": { + "Dice": 0.8806818181818182, + "FN": 3, + "FP": 39, + "IoU": 0.7868020304568528, + "TN": 1403, + "TP": 155, + "n_pred": 194, + "n_ref": 158 + }, + "3": { + "Dice": 0.978125, + "FN": 11, + "FP": 3, + "IoU": 0.9571865443425076, + "TN": 1273, + "TP": 313, + "n_pred": 316, + "n_ref": 324 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9289795918367347, + "FN": 59, + "FP": 28, + "IoU": 0.8673780487804879, + "TN": 1744, + "TP": 569, + "n_pred": 597, + "n_ref": 628 + }, + "3": { + "Dice": 0.9832109129066107, + "FN": 13, + "FP": 19, + "IoU": 0.9669762641898865, + "TN": 1431, + "TP": 937, + "n_pred": 956, + "n_ref": 950 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.3048780487804878, + "FN": 2, + "FP": 112, + "IoU": 0.17985611510791366, + "TN": 2261, + "TP": 25, + "n_pred": 137, + "n_ref": 27 + }, + "3": { + "Dice": 0.7027027027027027, + "FN": 9, + "FP": 299, + "IoU": 0.5416666666666666, + "TN": 1728, + "TP": 364, + "n_pred": 663, + "n_ref": 373 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.853220696937698, + "FN": 0, + "FP": 139, + "IoU": 0.7440147329650092, + "TN": 1057, + "TP": 404, + "n_pred": 543, + "n_ref": 404 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7863247863247863, + "FN": 24, + "FP": 51, + "IoU": 0.647887323943662, + "TN": 2987, + "TP": 138, + "n_pred": 189, + "n_ref": 162 + }, + "2": { + "Dice": 0.9322033898305084, + "FN": 14, + "FP": 18, + "IoU": 0.873015873015873, + "TN": 2948, + "TP": 220, + "n_pred": 238, + "n_ref": 234 + }, + "3": { + "Dice": 0.9595687331536388, + "FN": 1, + "FP": 14, + "IoU": 0.9222797927461139, + "TN": 3007, + "TP": 178, + "n_pred": 192, + "n_ref": 179 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9581920903954803, + "FN": 4, + "FP": 33, + "IoU": 0.9197396963123644, + "TN": 2739, + "TP": 424, + "n_pred": 457, + "n_ref": 428 + }, + "2": { + "Dice": 0.8932330827067669, + "FN": 108, + "FP": 34, + "IoU": 0.8070652173913043, + "TN": 2464, + "TP": 594, + "n_pred": 628, + "n_ref": 702 + }, + "3": { + "Dice": 0.9635036496350365, + "FN": 23, + "FP": 27, + "IoU": 0.9295774647887324, + "TN": 2490, + "TP": 660, + "n_pred": 687, + "n_ref": 683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7581395348837209, + "FN": 98, + "FP": 6, + "IoU": 0.6104868913857678, + "TN": 2133, + "TP": 163, + "n_pred": 169, + "n_ref": 261 + }, + "2": { + "Dice": 0.921161825726141, + "FN": 12, + "FP": 26, + "IoU": 0.8538461538461538, + "TN": 2140, + "TP": 222, + "n_pred": 248, + "n_ref": 234 + }, + "3": { + "Dice": 0.9783352337514253, + "FN": 13, + "FP": 6, + "IoU": 0.9575892857142857, + "TN": 1952, + "TP": 429, + "n_pred": 435, + "n_ref": 442 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9457364341085271, + "FN": 29, + "FP": 6, + "IoU": 0.8970588235294118, + "TN": 2060, + "TP": 305, + "n_pred": 311, + "n_ref": 334 + }, + "2": { + "Dice": 0.6697782963827305, + "FN": 167, + "FP": 116, + "IoU": 0.5035087719298246, + "TN": 1830, + "TP": 287, + "n_pred": 403, + "n_ref": 454 + }, + "3": { + "Dice": 0.8435754189944135, + "FN": 112, + "FP": 0, + "IoU": 0.7294685990338164, + "TN": 1986, + "TP": 302, + "n_pred": 302, + "n_ref": 414 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.936026936026936, + "FN": 15, + "FP": 4, + "IoU": 0.879746835443038, + "TN": 1442, + "TP": 139, + "n_pred": 143, + "n_ref": 154 + }, + "3": { + "Dice": 0.9914396887159533, + "FN": 4, + "FP": 7, + "IoU": 0.9830246913580247, + "TN": 952, + "TP": 637, + "n_pred": 644, + "n_ref": 641 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9760479041916168, + "FN": 22, + "FP": 2, + "IoU": 0.9532163742690059, + "TN": 1087, + "TP": 489, + "n_pred": 491, + "n_ref": 511 + }, + "2": { + "Dice": 0.9450757575757576, + "FN": 24, + "FP": 34, + "IoU": 0.895870736086176, + "TN": 1043, + "TP": 499, + "n_pred": 533, + "n_ref": 523 + }, + "3": { + "Dice": 0.9694117647058823, + "FN": 5, + "FP": 21, + "IoU": 0.9406392694063926, + "TN": 1162, + "TP": 412, + "n_pred": 433, + "n_ref": 417 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.7475857104590234, + "FN": 37.10344827586207, + "FP": 42.50574712643678, + "IoU": 0.6659927300734537, + "TN": 1478.080459770115, + "TP": 235.41379310344828, + "n_pred": 277.91954022988506, + "n_ref": 272.51724137931035 + }, + "mean": { + "1": { + "Dice": 0.6157468570677916, + "FN": 25.79310344827586, + "FP": 54.13793103448276, + "IoU": 0.5176566659473495, + "TN": 1576.4137931034484, + "TP": 136.75862068965517, + "n_pred": 190.89655172413794, + "n_ref": 162.55172413793105 + }, + "2": { + "Dice": 0.8255306553712801, + "FN": 50.96551724137931, + "FP": 48.206896551724135, + "IoU": 0.7279765434638734, + "TN": 1429.4827586206898, + "TP": 264.44827586206895, + "n_pred": 312.6551724137931, + "n_ref": 315.41379310344826 + }, + "3": { + "Dice": 0.8014796189379987, + "FN": 34.55172413793103, + "FP": 25.17241379310345, + "IoU": 0.7523449808091384, + "TN": 1428.344827586207, + "TP": 305.0344827586207, + "n_pred": 330.2068965517241, + "n_ref": 339.58620689655174 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9888268156424581, + "FN": 5, + "FP": 3, + "IoU": 0.9779005524861878, + "TN": 2038, + "TP": 354, + "n_pred": 357, + "n_ref": 359 + }, + "2": { + "Dice": 0.6588235294117647, + "FN": 28, + "FP": 1, + "IoU": 0.49122807017543857, + "TN": 2343, + "TP": 28, + "n_pred": 29, + "n_ref": 56 + }, + "3": { + "Dice": 0.0, + "FN": 4, + "FP": 0, + "IoU": 0.0, + "TN": 2396, + "TP": 0, + "n_pred": 0, + "n_ref": 4 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6604434072345391, + "FN": 23, + "FP": 268, + "IoU": 0.4930313588850174, + "TN": 1026, + "TP": 283, + "n_pred": 551, + "n_ref": 306 + }, + "2": { + "Dice": 0.8908296943231441, + "FN": 25, + "FP": 25, + "IoU": 0.8031496062992126, + "TN": 1346, + "TP": 204, + "n_pred": 229, + "n_ref": 229 + }, + "3": { + "Dice": 0.9652650822669104, + "FN": 4, + "FP": 15, + "IoU": 0.9328621908127208, + "TN": 1317, + "TP": 264, + "n_pred": 279, + "n_ref": 268 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7222222222222222, + "FN": 121, + "FP": 29, + "IoU": 0.5652173913043478, + "TN": 3655, + "TP": 195, + "n_pred": 224, + "n_ref": 316 + }, + "2": { + "Dice": 0.7608951707891637, + "FN": 185, + "FP": 221, + "IoU": 0.6140684410646388, + "TN": 2948, + "TP": 646, + "n_pred": 867, + "n_ref": 831 + }, + "3": { + "Dice": 0.92, + "FN": 23, + "FP": 113, + "IoU": 0.8518518518518519, + "TN": 3082, + "TP": 782, + "n_pred": 895, + "n_ref": 805 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8882175226586103, + "FN": 101, + "FP": 10, + "IoU": 0.7989130434782609, + "TN": 2648, + "TP": 441, + "n_pred": 451, + "n_ref": 542 + }, + "2": { + "Dice": 0.8705148205928237, + "FN": 45, + "FP": 38, + "IoU": 0.7707182320441989, + "TN": 2838, + "TP": 279, + "n_pred": 317, + "n_ref": 324 + }, + "3": { + "Dice": 0.9607438016528925, + "FN": 37, + "FP": 1, + "IoU": 0.9244532803180915, + "TN": 2697, + "TP": 465, + "n_pred": 466, + "n_ref": 502 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.89198606271777, + "FN": 2, + "FP": 60, + "IoU": 0.8050314465408805, + "TN": 2082, + "TP": 256, + "n_pred": 316, + "n_ref": 258 + }, + "2": { + "Dice": 0.8095975232198143, + "FN": 81, + "FP": 165, + "IoU": 0.6801040312093628, + "TN": 1631, + "TP": 523, + "n_pred": 688, + "n_ref": 604 + }, + "3": { + "Dice": 0.8834586466165414, + "FN": 6, + "FP": 56, + "IoU": 0.7912457912457912, + "TN": 2103, + "TP": 235, + "n_pred": 291, + "n_ref": 241 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8013029315960912, + "FN": 88, + "FP": 34, + "IoU": 0.6684782608695652, + "TN": 1232, + "TP": 246, + "n_pred": 280, + "n_ref": 334 + }, + "2": { + "Dice": 0.8985507246376812, + "FN": 21, + "FP": 0, + "IoU": 0.8157894736842105, + "TN": 1486, + "TP": 93, + "n_pred": 93, + "n_ref": 114 + }, + "3": { + "Dice": 0.8, + "FN": 0, + "FP": 1, + "IoU": 0.6666666666666666, + "TN": 1597, + "TP": 2, + "n_pred": 3, + "n_ref": 2 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8871595330739299, + "FN": 4, + "FP": 54, + "IoU": 0.7972027972027972, + "TN": 514, + "TP": 228, + "n_pred": 282, + "n_ref": 232 + }, + "3": { + "Dice": 0.9790794979079498, + "FN": 16, + "FP": 4, + "IoU": 0.9590163934426229, + "TN": 312, + "TP": 468, + "n_pred": 472, + "n_ref": 484 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8977777777777778, + "FN": 32, + "FP": 14, + "IoU": 0.8145161290322581, + "TN": 552, + "TP": 202, + "n_pred": 216, + "n_ref": 234 + }, + "3": { + "Dice": 0.9831387808041504, + "FN": 12, + "FP": 1, + "IoU": 0.9668367346938775, + "TN": 408, + "TP": 379, + "n_pred": 380, + "n_ref": 391 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8053435114503816, + "FN": 47, + "FP": 55, + "IoU": 0.6741214057507987, + "TN": 1287, + "TP": 211, + "n_pred": 266, + "n_ref": 258 + }, + "3": { + "Dice": 0.937748344370861, + "FN": 0, + "FP": 47, + "IoU": 0.8827930174563591, + "TN": 1199, + "TP": 354, + "n_pred": 401, + "n_ref": 354 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6061538461538462, + "FN": 23, + "FP": 233, + "IoU": 0.434878587196468, + "TN": 2747, + "TP": 197, + "n_pred": 430, + "n_ref": 220 + }, + "2": { + "Dice": 0.8097967691505993, + "FN": 333, + "FP": 32, + "IoU": 0.680385288966725, + "TN": 2058, + "TP": 777, + "n_pred": 809, + "n_ref": 1110 + }, + "3": { + "Dice": 0.71875, + "FN": 35, + "FP": 91, + "IoU": 0.5609756097560976, + "TN": 2913, + "TP": 161, + "n_pred": 252, + "n_ref": 196 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7948717948717948, + "FN": 11, + "FP": 101, + "IoU": 0.6595744680851063, + "TN": 1271, + "TP": 217, + "n_pred": 318, + "n_ref": 228 + }, + "3": { + "Dice": 0.9485334809075816, + "FN": 93, + "FP": 0, + "IoU": 0.9021052631578947, + "TN": 650, + "TP": 857, + "n_pred": 857, + "n_ref": 950 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 16, + "IoU": 0.0, + "TN": 3184, + "TP": 0, + "n_pred": 16, + "n_ref": 0 + }, + "2": { + "Dice": 0.8215102974828375, + "FN": 151, + "FP": 5, + "IoU": 0.6970873786407767, + "TN": 2685, + "TP": 359, + "n_pred": 364, + "n_ref": 510 + }, + "3": { + "Dice": 0.960952380952381, + "FN": 49, + "FP": 33, + "IoU": 0.9248395967002749, + "TN": 2109, + "TP": 1009, + "n_pred": 1042, + "n_ref": 1058 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.34782608695652173, + "FN": 4, + "FP": 11, + "IoU": 0.21052631578947367, + "TN": 781, + "TP": 4, + "n_pred": 15, + "n_ref": 8 + }, + "2": { + "Dice": 0.9381898454746137, + "FN": 41, + "FP": 15, + "IoU": 0.8835758835758836, + "TN": 319, + "TP": 425, + "n_pred": 440, + "n_ref": 466 + }, + "3": { + "Dice": 0.0, + "FN": 14, + "FP": 0, + "IoU": 0.0, + "TN": 786, + "TP": 0, + "n_pred": 0, + "n_ref": 14 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8926261319534282, + "FN": 83, + "FP": 0, + "IoU": 0.8060747663551402, + "TN": 1172, + "TP": 345, + "n_pred": 345, + "n_ref": 428 + }, + "2": { + "Dice": 0.7463126843657817, + "FN": 0, + "FP": 172, + "IoU": 0.5952941176470589, + "TN": 1175, + "TP": 253, + "n_pred": 425, + "n_ref": 253 + }, + "3": { + "Dice": 0.5219123505976095, + "FN": 15, + "FP": 225, + "IoU": 0.353099730458221, + "TN": 1229, + "TP": 131, + "n_pred": 356, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9041916167664671, + "FN": 2, + "FP": 30, + "IoU": 0.825136612021858, + "TN": 617, + "TP": 151, + "n_pred": 181, + "n_ref": 153 + }, + "3": { + "Dice": 0.9333333333333333, + "FN": 30, + "FP": 1, + "IoU": 0.875, + "TN": 552, + "TP": 217, + "n_pred": 218, + "n_ref": 247 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 27, + "IoU": 0.0, + "TN": 2373, + "TP": 0, + "n_pred": 27, + "n_ref": 0 + }, + "2": { + "Dice": 0.97, + "FN": 6, + "FP": 18, + "IoU": 0.941747572815534, + "TN": 1988, + "TP": 388, + "n_pred": 406, + "n_ref": 394 + }, + "3": { + "Dice": 0.9724310776942355, + "FN": 16, + "FP": 6, + "IoU": 0.9463414634146341, + "TN": 1990, + "TP": 388, + "n_pred": 394, + "n_ref": 404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8397212543554007, + "FN": 15, + "FP": 77, + "IoU": 0.7237237237237237, + "TN": 467, + "TP": 241, + "n_pred": 318, + "n_ref": 256 + }, + "3": { + "Dice": 0.9672131147540983, + "FN": 13, + "FP": 15, + "IoU": 0.9365079365079365, + "TN": 359, + "TP": 413, + "n_pred": 428, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 97, + "IoU": 0.0, + "TN": 2303, + "TP": 0, + "n_pred": 97, + "n_ref": 0 + }, + "2": { + "Dice": 0.7228915662650602, + "FN": 5, + "FP": 248, + "IoU": 0.5660377358490566, + "TN": 1817, + "TP": 330, + "n_pred": 578, + "n_ref": 335 + }, + "3": { + "Dice": 0.9652728561304039, + "FN": 44, + "FP": 5, + "IoU": 0.9328767123287671, + "TN": 1670, + "TP": 681, + "n_pred": 686, + "n_ref": 725 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8828125, + "FN": 28, + "FP": 32, + "IoU": 0.7902097902097902, + "TN": 514, + "TP": 226, + "n_pred": 258, + "n_ref": 254 + }, + "3": { + "Dice": 0.9670050761421319, + "FN": 17, + "FP": 9, + "IoU": 0.9361179361179361, + "TN": 393, + "TP": 381, + "n_pred": 390, + "n_ref": 398 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6666666666666666, + "FN": 3, + "FP": 0, + "IoU": 0.5, + "TN": 794, + "TP": 3, + "n_pred": 3, + "n_ref": 6 + }, + "2": { + "Dice": 0.9290780141843972, + "FN": 24, + "FP": 16, + "IoU": 0.8675496688741722, + "TN": 498, + "TP": 262, + "n_pred": 278, + "n_ref": 286 + }, + "3": { + "Dice": 0.9755102040816327, + "FN": 3, + "FP": 9, + "IoU": 0.952191235059761, + "TN": 549, + "TP": 239, + "n_pred": 248, + "n_ref": 242 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8458498023715415, + "FN": 29, + "FP": 88, + "IoU": 0.7328767123287672, + "TN": 1162, + "TP": 321, + "n_pred": 409, + "n_ref": 350 + }, + "2": { + "Dice": 0.896551724137931, + "FN": 4, + "FP": 2, + "IoU": 0.8125, + "TN": 1568, + "TP": 26, + "n_pred": 28, + "n_ref": 30 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.972338642078793, + "FN": 28, + "FP": 5, + "IoU": 0.9461663947797716, + "TN": 1787, + "TP": 580, + "n_pred": 585, + "n_ref": 608 + }, + "2": { + "Dice": 0.9339477726574501, + "FN": 32, + "FP": 11, + "IoU": 0.8760806916426513, + "TN": 2053, + "TP": 304, + "n_pred": 315, + "n_ref": 336 + }, + "3": { + "Dice": 0.9497716894977168, + "FN": 0, + "FP": 22, + "IoU": 0.9043478260869565, + "TN": 2170, + "TP": 208, + "n_pred": 230, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.41904761904761906, + "FN": 61, + "FP": 0, + "IoU": 0.26506024096385544, + "TN": 717, + "TP": 22, + "n_pred": 22, + "n_ref": 83 + }, + "2": { + "Dice": 0.9144254278728606, + "FN": 21, + "FP": 14, + "IoU": 0.8423423423423423, + "TN": 578, + "TP": 187, + "n_pred": 201, + "n_ref": 208 + }, + "3": { + "Dice": 0.9633911368015414, + "FN": 3, + "FP": 16, + "IoU": 0.929368029739777, + "TN": 531, + "TP": 250, + "n_pred": 266, + "n_ref": 253 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5076530612244898, + "FN": 105, + "FP": 667, + "IoU": 0.3401709401709402, + "TN": 1230, + "TP": 398, + "n_pred": 1065, + "n_ref": 503 + }, + "2": { + "Dice": 0.05737704918032787, + "FN": 230, + "FP": 0, + "IoU": 0.029535864978902954, + "TN": 2163, + "TP": 7, + "n_pred": 7, + "n_ref": 237 + }, + "3": { + "Dice": 0.0, + "FN": 552, + "FP": 0, + "IoU": 0.0, + "TN": 1848, + "TP": 0, + "n_pred": 0, + "n_ref": 552 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8722826086956522, + "FN": 72, + "FP": 22, + "IoU": 0.7734939759036145, + "TN": 1185, + "TP": 321, + "n_pred": 343, + "n_ref": 393 + }, + "2": { + "Dice": 0.8888888888888888, + "FN": 1, + "FP": 5, + "IoU": 0.8, + "TN": 1570, + "TP": 24, + "n_pred": 29, + "n_ref": 25 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9337375487223907, + "FN": 106, + "FP": 47, + "IoU": 0.875710804224208, + "TN": 1169, + "TP": 1078, + "n_pred": 1125, + "n_ref": 1184 + }, + "3": { + "Dice": 0.962, + "FN": 16, + "FP": 60, + "IoU": 0.9267822736030829, + "TN": 1362, + "TP": 962, + "n_pred": 1022, + "n_ref": 978 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2867424/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8268284998666988, + "FN": 36.29220032840722, + "FP": 37.38399014778325, + "IoU": 0.7459777808550611, + "TN": 1653.6279146141217, + "TP": 288.85353037766833, + "n_pred": 326.23752052545154, + "n_ref": 325.1457307060755 + }, + "mean": { + "1": { + "Dice": 0.7335876764170083, + "FN": 38.89384236453202, + "FP": 45.84655172413793, + "IoU": 0.6406476286544006, + "TN": 1726.706403940887, + "TP": 204.71083743842365, + "n_pred": 250.55738916256155, + "n_ref": 243.6046798029557 + }, + "2": { + "Dice": 0.858420119949384, + "FN": 46.52118226600985, + "FP": 43.714532019704436, + "IoU": 0.7672253746224291, + "TN": 1610.884975369458, + "TP": 315.03694581280786, + "n_pred": 358.7514778325123, + "n_ref": 361.55812807881773 + }, + "3": { + "Dice": 0.8884777032337048, + "FN": 23.461576354679803, + "FP": 22.590886699507386, + "IoU": 0.8300603392883534, + "TN": 1623.2923645320195, + "TP": 346.81280788177344, + "n_pred": 369.4036945812808, + "n_ref": 370.27438423645316 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_004/summary.json b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_004/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..15f6d4713bbce538c600cafa6275f4b1f5fde3d8 --- /dev/null +++ b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_004/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8675989891034992, + "FN": 934.46, + "FP": 1398.82, + "IoU": 0.7778232531144661, + "TN": 842835.7066666667, + "TP": 9259.653333333334, + "n_pred": 10658.473333333333, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8105774061565111, + "FN": 1181.32, + "FP": 2087.88, + "IoU": 0.6964719004291082, + "TN": 842486.7, + "TP": 8672.74, + "n_pred": 10760.62, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8612533308338768, + "FN": 1153.98, + "FP": 1451.38, + "IoU": 0.7603674867170024, + "TN": 842921.76, + "TP": 8901.52, + "n_pred": 10352.9, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9309662303201099, + "FN": 468.08, + "FP": 657.2, + "IoU": 0.8766303721972877, + "TN": 843098.66, + "TP": 10204.7, + "n_pred": 10861.9, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8785330434425893, + "FN": 738, + "FP": 2223, + "IoU": 0.7833784475821202, + "TN": 1092251, + "TP": 10708, + "n_pred": 12931, + "n_ref": 11446 + }, + "2": { + "Dice": 0.851702447695884, + "FN": 999, + "FP": 3339, + "IoU": 0.7417088419172373, + "TN": 1089125, + "TP": 12457, + "n_pred": 15796, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9417561288255087, + "FN": 698, + "FP": 2210, + "IoU": 0.8899235369823605, + "TN": 1079502, + "TP": 23510, + "n_pred": 25720, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7316173645793316, + "FN": 117, + "FP": 3376, + "IoU": 0.5768112430336806, + "TN": 1097666, + "TP": 4761, + "n_pred": 8137, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8838343312141226, + "FN": 1661, + "FP": 2103, + "IoU": 0.7918486976718465, + "TN": 1087837, + "TP": 14319, + "n_pred": 16422, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9212046204620462, + "FN": 618, + "FP": 2438, + "IoU": 0.8539196940726578, + "TN": 1085000, + "TP": 17864, + "n_pred": 20302, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6827498639579177, + "FN": 1342, + "FP": 5654, + "IoU": 0.5183145139080143, + "TN": 894916, + "TP": 7528, + "n_pred": 13182, + "n_ref": 8870 + }, + "2": { + "Dice": 0.9079131394920869, + "FN": 1452, + "FP": 1050, + "IoU": 0.831356160690213, + "TN": 894604, + "TP": 12334, + "n_pred": 13384, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9753856252051198, + "FN": 608, + "FP": 442, + "IoU": 0.9519538757206919, + "TN": 887586, + "TP": 20804, + "n_pred": 21246, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5251798561151079, + "FN": 1941, + "FP": 7167, + "IoU": 0.35609756097560974, + "TN": 895295, + "TP": 5037, + "n_pred": 12204, + "n_ref": 6978 + }, + "2": { + "Dice": 0.9, + "FN": 1409, + "FP": 1461, + "IoU": 0.8181818181818182, + "TN": 893655, + "TP": 12915, + "n_pred": 14376, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9731320713957822, + "FN": 615, + "FP": 380, + "IoU": 0.947670137793205, + "TN": 890426, + "TP": 18019, + "n_pred": 18399, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.906191330028478, + "FN": 2699, + "FP": 1748, + "IoU": 0.8284733472190079, + "TN": 1399834, + "TP": 21479, + "n_pred": 23227, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8766599789815611, + "FN": 1320, + "FP": 2553, + "IoU": 0.7804048307535295, + "TN": 1408123, + "TP": 13764, + "n_pred": 16317, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9734499330339558, + "FN": 564, + "FP": 784, + "IoU": 0.9482732156561781, + "TN": 1399700, + "TP": 24712, + "n_pred": 25496, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.864416596461668, + "FN": 1133, + "FP": 4017, + "IoU": 0.7612092548801409, + "TN": 1404193, + "TP": 16417, + "n_pred": 20434, + "n_ref": 17550 + }, + "2": { + "Dice": 0.876201773005369, + "FN": 1033, + "FP": 2933, + "IoU": 0.779678906727404, + "TN": 1407759, + "TP": 14035, + "n_pred": 16968, + "n_ref": 15068 + }, + "3": { + "Dice": 0.966976127320955, + "FN": 827, + "FP": 667, + "IoU": 0.9360636795480807, + "TN": 1402393, + "TP": 21873, + "n_pred": 22540, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8550038929148949, + "FN": 2120, + "FP": 301, + "IoU": 0.7467308295846846, + "TN": 752489, + "TP": 7138, + "n_pred": 7439, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8692926548949953, + "FN": 1090, + "FP": 1412, + "IoU": 0.768804287562373, + "TN": 751226, + "TP": 8320, + "n_pred": 9732, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9697562206313665, + "FN": 641, + "FP": 318, + "IoU": 0.9412881106893596, + "TN": 745714, + "TP": 15375, + "n_pred": 15693, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8092449922958398, + "FN": 979, + "FP": 878, + "IoU": 0.6796066252587992, + "TN": 756252, + "TP": 3939, + "n_pred": 4817, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8492406810860561, + "FN": 2011, + "FP": 1265, + "IoU": 0.7379828841078141, + "TN": 749545, + "TP": 9227, + "n_pred": 10492, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9410011396510914, + "FN": 1178, + "FP": 168, + "IoU": 0.8885761589403973, + "TN": 749968, + "TP": 10734, + "n_pred": 10902, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.869119040101042, + "FN": 2834, + "FP": 482, + "IoU": 0.7685327376797432, + "TN": 1063946, + "TP": 11010, + "n_pred": 11492, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8719798409012303, + "FN": 1046, + "FP": 1545, + "IoU": 0.773017958826106, + "TN": 1066857, + "TP": 8824, + "n_pred": 10369, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9572192513368984, + "FN": 1220, + "FP": 316, + "IoU": 0.9179487179487179, + "TN": 1059552, + "TP": 17184, + "n_pred": 17500, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.878356142392744, + "FN": 2353, + "FP": 678, + "IoU": 0.7830971804780307, + "TN": 1064298, + "TP": 10943, + "n_pred": 11621, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8828537059313408, + "FN": 1259, + "FP": 1273, + "IoU": 0.7902758220823325, + "TN": 1066199, + "TP": 9541, + "n_pred": 10814, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9524763717730355, + "FN": 966, + "FP": 457, + "IoU": 0.9092648090288847, + "TN": 1062589, + "TP": 14260, + "n_pred": 14717, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7194515673242975, + "FN": 2258, + "FP": 3103, + "IoU": 0.5618308132407029, + "TN": 1093685, + "TP": 6874, + "n_pred": 9977, + "n_ref": 9132 + }, + "2": { + "Dice": 0.85375591685532, + "FN": 1111, + "FP": 2442, + "IoU": 0.7448290721057167, + "TN": 1091996, + "TP": 10371, + "n_pred": 12813, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9060586869326578, + "FN": 766, + "FP": 1459, + "IoU": 0.828251640293323, + "TN": 1092965, + "TP": 10730, + "n_pred": 12189, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6094813424078854, + "FN": 455, + "FP": 2873, + "IoU": 0.43831223628691984, + "TN": 1099995, + "TP": 2597, + "n_pred": 5470, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8679996993159438, + "FN": 805, + "FP": 2707, + "IoU": 0.7667839830001992, + "TN": 1090861, + "TP": 11547, + "n_pred": 14254, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7855138995154297, + "FN": 200, + "FP": 1482, + "IoU": 0.6467870642587148, + "TN": 1101158, + "TP": 3080, + "n_pred": 4562, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8643704121964991, + "FN": 1510, + "FP": 892, + "IoU": 0.7611376292760541, + "TN": 1136824, + "TP": 7654, + "n_pred": 8546, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9213347120986658, + "FN": 1151, + "FP": 1968, + "IoU": 0.8541432846988403, + "TN": 1125496, + "TP": 18265, + "n_pred": 20233, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9442991295398997, + "FN": 919, + "FP": 380, + "IoU": 0.8944760357432981, + "TN": 1134570, + "TP": 11011, + "n_pred": 11391, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6420503909643788, + "FN": 988, + "FP": 660, + "IoU": 0.472808701215611, + "TN": 1143754, + "TP": 1478, + "n_pred": 2138, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8049055719973599, + "FN": 5534, + "FP": 3629, + "IoU": 0.6735079280242294, + "TN": 1118815, + "TP": 18902, + "n_pred": 22531, + "n_ref": 24436 + }, + "3": { + "Dice": 0.5522372636147567, + "FN": 44, + "FP": 4289, + "IoU": 0.3814418272662384, + "TN": 1139875, + "TP": 2672, + "n_pred": 6961, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9491394148020654, + "FN": 817, + "FP": 365, + "IoU": 0.9032020309556957, + "TN": 788589, + "TP": 11029, + "n_pred": 11394, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8876573143978755, + "FN": 946, + "FP": 1000, + "IoU": 0.7980070583350634, + "TN": 791166, + "TP": 7688, + "n_pred": 8688, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9601788130109994, + "FN": 491, + "FP": 186, + "IoU": 0.9234076252969793, + "TN": 791961, + "TP": 8162, + "n_pred": 8348, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6359707153567963, + "FN": 334, + "FP": 3793, + "IoU": 0.46624418003103985, + "TN": 793068, + "TP": 3605, + "n_pred": 7398, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9000121985930956, + "FN": 1585, + "FP": 874, + "IoU": 0.8182019813692148, + "TN": 787274, + "TP": 11067, + "n_pred": 11941, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8834697217675941, + "FN": 147, + "FP": 565, + "IoU": 0.7912635590735855, + "TN": 797389, + "TP": 2699, + "n_pred": 3264, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9456294006525846, + "FN": 426, + "FP": 1157, + "IoU": 0.8968662453580037, + "TN": 1332491, + "TP": 13766, + "n_pred": 14923, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8786321592076988, + "FN": 1202, + "FP": 1396, + "IoU": 0.7835360773204466, + "TN": 1335838, + "TP": 9404, + "n_pred": 10800, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9720047381041805, + "FN": 506, + "FP": 463, + "IoU": 0.9455342588949469, + "TN": 1330049, + "TP": 16822, + "n_pred": 17285, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7296438071757607, + "FN": 245, + "FP": 3922, + "IoU": 0.5743615934627171, + "TN": 1338050, + "TP": 5623, + "n_pred": 9545, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8830755417703955, + "FN": 1295, + "FP": 1570, + "IoU": 0.7906313943291435, + "TN": 1334156, + "TP": 10819, + "n_pred": 12389, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9576079052059717, + "FN": 425, + "FP": 566, + "IoU": 0.9186638214051215, + "TN": 1335656, + "TP": 11193, + "n_pred": 11759, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8527244875629149, + "FN": 772, + "FP": 3266, + "IoU": 0.7432604272634792, + "TN": 836240, + "TP": 11690, + "n_pred": 14956, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8575219432537252, + "FN": 1046, + "FP": 1746, + "IoU": 0.7505806682151153, + "TN": 840774, + "TP": 8402, + "n_pred": 10148, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9697765378408687, + "FN": 760, + "FP": 345, + "IoU": 0.9413263951574364, + "TN": 833135, + "TP": 17728, + "n_pred": 18073, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8813370473537604, + "FN": 610, + "FP": 1094, + "IoU": 0.7878486055776892, + "TN": 843936, + "TP": 6328, + "n_pred": 7422, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8858758060242028, + "FN": 1263, + "FP": 1321, + "IoU": 0.7951320066597954, + "TN": 839355, + "TP": 10029, + "n_pred": 11350, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9602595296025953, + "FN": 564, + "FP": 465, + "IoU": 0.9235569422776911, + "TN": 838507, + "TP": 12432, + "n_pred": 12897, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7299823187673655, + "FN": 1521, + "FP": 1686, + "IoU": 0.5747812251392204, + "TN": 844426, + "TP": 4335, + "n_pred": 6021, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8823976059672161, + "FN": 842, + "FP": 1791, + "IoU": 0.789545200223803, + "TN": 839457, + "TP": 9878, + "n_pred": 11669, + "n_ref": 10720 + }, + "3": { + "Dice": 0.944184168012924, + "FN": 1267, + "FP": 115, + "IoU": 0.8942697574783872, + "TN": 838897, + "TP": 11689, + "n_pred": 11804, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49623464130003964, + "FN": 226, + "FP": 3587, + "IoU": 0.32999472851871375, + "TN": 846277, + "TP": 1878, + "n_pred": 5465, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8986144365506142, + "FN": 1139, + "FP": 1444, + "IoU": 0.8158945117605132, + "TN": 837938, + "TP": 11447, + "n_pred": 12891, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9470221213840045, + "FN": 398, + "FP": 536, + "IoU": 0.8993751346692523, + "TN": 842686, + "TP": 8348, + "n_pred": 8884, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7735035508961785, + "FN": 3939, + "FP": 1419, + "IoU": 0.6306610601778452, + "TN": 782533, + "TP": 9149, + "n_pred": 10568, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8444784103935804, + "FN": 1119, + "FP": 1730, + "IoU": 0.7308201058201058, + "TN": 786456, + "TP": 7735, + "n_pred": 9465, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9574492313531979, + "FN": 846, + "FP": 275, + "IoU": 0.9183718051409014, + "TN": 783307, + "TP": 12612, + "n_pred": 12887, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6995605273671595, + "FN": 2415, + "FP": 2097, + "IoU": 0.5379416282642089, + "TN": 787275, + "TP": 5253, + "n_pred": 7350, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8622925708450344, + "FN": 1178, + "FP": 1519, + "IoU": 0.7579211919935374, + "TN": 785899, + "TP": 8444, + "n_pred": 9963, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9349975147732921, + "FN": 567, + "FP": 610, + "IoU": 0.877929890064302, + "TN": 787398, + "TP": 8465, + "n_pred": 9075, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9069823434991975, + "FN": 1167, + "FP": 1151, + "IoU": 0.8297966076804464, + "TN": 883051, + "TP": 11301, + "n_pred": 12452, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8567146002154667, + "FN": 1193, + "FP": 1866, + "IoU": 0.7493444772205834, + "TN": 884466, + "TP": 9145, + "n_pred": 11011, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9552935495553498, + "FN": 382, + "FP": 729, + "IoU": 0.9144133733918804, + "TN": 883689, + "TP": 11870, + "n_pred": 12599, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7629520638116627, + "FN": 1430, + "FP": 1631, + "IoU": 0.6167522223613372, + "TN": 888683, + "TP": 4926, + "n_pred": 6557, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8924182897266572, + "FN": 842, + "FP": 1732, + "IoU": 0.8057358490566038, + "TN": 883420, + "TP": 10676, + "n_pred": 12408, + "n_ref": 11518 + }, + "3": { + "Dice": 0.949828178694158, + "FN": 534, + "FP": 342, + "IoU": 0.9044502617801047, + "TN": 887502, + "TP": 8292, + "n_pred": 8634, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9585529254131309, + "FN": 489, + "FP": 439, + "IoU": 0.9204048374646197, + "TN": 750389, + "TP": 10731, + "n_pred": 11170, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9296451039715699, + "FN": 733, + "FP": 732, + "IoU": 0.8685391241923905, + "TN": 750904, + "TP": 9679, + "n_pred": 10411, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9752397187300235, + "FN": 310, + "FP": 271, + "IoU": 0.9516759544206936, + "TN": 750025, + "TP": 11442, + "n_pred": 11713, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8672479430185436, + "FN": 261, + "FP": 820, + "IoU": 0.76561144839549, + "TN": 757436, + "TP": 3531, + "n_pred": 4351, + "n_ref": 3792 + }, + "2": { + "Dice": 0.916984528350405, + "FN": 934, + "FP": 1003, + "IoU": 0.8466956865848833, + "TN": 749413, + "TP": 10698, + "n_pred": 11701, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9578908280727813, + "FN": 385, + "FP": 182, + "IoU": 0.9191847206385405, + "TN": 755032, + "TP": 6449, + "n_pred": 6631, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8249339672477549, + "FN": 134, + "FP": 3180, + "IoU": 0.7020320086315411, + "TN": 984206, + "TP": 7808, + "n_pred": 10988, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8597314703634974, + "FN": 872, + "FP": 1698, + "IoU": 0.7539728125598315, + "TN": 984882, + "TP": 7876, + "n_pred": 9574, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9758764111705288, + "FN": 122, + "FP": 690, + "IoU": 0.9528893014620562, + "TN": 978092, + "TP": 16424, + "n_pred": 17114, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7000837420744108, + "FN": 316, + "FP": 2191, + "IoU": 0.5385606478925088, + "TN": 989895, + "TP": 2926, + "n_pred": 5117, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8337045689140001, + "FN": 661, + "FP": 2400, + "IoU": 0.7148313769331097, + "TN": 984594, + "TP": 7673, + "n_pred": 10073, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9275939949515078, + "FN": 141, + "FP": 1494, + "IoU": 0.8649653121902874, + "TN": 983220, + "TP": 10473, + "n_pred": 11967, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9321808510638298, + "FN": 1005, + "FP": 933, + "IoU": 0.8729763387297634, + "TN": 742759, + "TP": 13319, + "n_pred": 14252, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8984339536995006, + "FN": 895, + "FP": 895, + "IoU": 0.8155969918615432, + "TN": 748309, + "TP": 7917, + "n_pred": 8812, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9738779803646563, + "FN": 192, + "FP": 404, + "IoU": 0.9490859388347855, + "TN": 746310, + "TP": 11110, + "n_pred": 11514, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7063605570191945, + "FN": 544, + "FP": 3357, + "IoU": 0.5460258349819621, + "TN": 749423, + "TP": 4692, + "n_pred": 8049, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8927254098360655, + "FN": 619, + "FP": 1475, + "IoU": 0.8062366984361987, + "TN": 747209, + "TP": 8713, + "n_pred": 10188, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8545987620805734, + "FN": 257, + "FP": 1082, + "IoU": 0.7461130072051574, + "TN": 752742, + "TP": 3935, + "n_pred": 5017, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9450865164871042, + "FN": 709, + "FP": 132, + "IoU": 0.8958900717999505, + "TN": 630898, + "TP": 7237, + "n_pred": 7369, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8858734723220705, + "FN": 437, + "FP": 833, + "IoU": 0.7951282464913696, + "TN": 632777, + "TP": 4929, + "n_pred": 5762, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9604281087170821, + "FN": 514, + "FP": 48, + "IoU": 0.9238688702248713, + "TN": 631594, + "TP": 6820, + "n_pred": 6868, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6987864952541151, + "FN": 112, + "FP": 2395, + "IoU": 0.5370267774699907, + "TN": 633561, + "TP": 2908, + "n_pred": 5303, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9200609311874959, + "FN": 406, + "FP": 801, + "IoU": 0.8519563350913774, + "TN": 630823, + "TP": 6946, + "n_pred": 7747, + "n_ref": 7352 + }, + "3": { + "Dice": 0.912459135488558, + "FN": 244, + "FP": 238, + "IoU": 0.8390113560454242, + "TN": 635982, + "TP": 2512, + "n_pred": 2750, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9150371329290727, + "FN": 2010, + "FP": 484, + "IoU": 0.843381060035167, + "TN": 967116, + "TP": 13430, + "n_pred": 13914, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8761226230495208, + "FN": 1165, + "FP": 1304, + "IoU": 0.7795535714285714, + "TN": 971840, + "TP": 8731, + "n_pred": 10035, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9650453116330683, + "FN": 173, + "FP": 772, + "IoU": 0.9324517512508935, + "TN": 969050, + "TP": 13045, + "n_pred": 13817, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8895908543922985, + "FN": 274, + "FP": 1194, + "IoU": 0.8011379030073151, + "TN": 975658, + "TP": 5914, + "n_pred": 7108, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9090354710844598, + "FN": 1012, + "FP": 778, + "IoU": 0.8332401714179244, + "TN": 972306, + "TP": 8944, + "n_pred": 9722, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9458437273678281, + "FN": 113, + "FP": 560, + "IoU": 0.8972519083969466, + "TN": 976490, + "TP": 5877, + "n_pred": 6437, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.949969567863664, + "FN": 572, + "FP": 1072, + "IoU": 0.9047067006723858, + "TN": 1031324, + "TP": 15608, + "n_pred": 16680, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8911443229979924, + "FN": 718, + "FP": 1234, + "IoU": 0.8036612351639509, + "TN": 1038634, + "TP": 7990, + "n_pred": 9224, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9692698054694108, + "FN": 227, + "FP": 536, + "IoU": 0.9403719912472648, + "TN": 1035780, + "TP": 12033, + "n_pred": 12569, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6618930971672634, + "FN": 161, + "FP": 5222, + "IoU": 0.49464889222681185, + "TN": 1037924, + "TP": 5269, + "n_pred": 10491, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8772737955346651, + "FN": 990, + "FP": 1621, + "IoU": 0.7813782131792681, + "TN": 1036633, + "TP": 9332, + "n_pred": 10953, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9335881509794554, + "FN": 195, + "FP": 500, + "IoU": 0.8754480286738351, + "TN": 1042996, + "TP": 4885, + "n_pred": 5385, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8574849237318198, + "FN": 1493, + "FP": 1721, + "IoU": 0.750523946285803, + "TN": 476333, + "TP": 9669, + "n_pred": 11390, + "n_ref": 11162 + }, + "2": { + "Dice": 0.8078119599032146, + "FN": 380, + "FP": 732, + "IoU": 0.6775877065816178, + "TN": 485767, + "TP": 2337, + "n_pred": 3069, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9551686615886833, + "FN": 262, + "FP": 150, + "IoU": 0.9141845448864819, + "TN": 484415, + "TP": 4389, + "n_pred": 4539, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7772965879265092, + "FN": 728, + "FP": 2666, + "IoU": 0.6357196522485778, + "TN": 479899, + "TP": 5923, + "n_pred": 8589, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8531490015360983, + "FN": 583, + "FP": 373, + "IoU": 0.7439057058665952, + "TN": 485483, + "TP": 2777, + "n_pred": 3150, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8798767967145791, + "FN": 76, + "FP": 392, + "IoU": 0.7855178735105408, + "TN": 487034, + "TP": 1714, + "n_pred": 2106, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8997132824329113, + "FN": 1912, + "FP": 1201, + "IoU": 0.8177080283422147, + "TN": 463403, + "TP": 13964, + "n_pred": 15165, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7796815158234227, + "FN": 651, + "FP": 1535, + "IoU": 0.6389164188965973, + "TN": 474426, + "TP": 3868, + "n_pred": 5403, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9413725632292195, + "FN": 465, + "FP": 344, + "IoU": 0.8892387732749178, + "TN": 473176, + "TP": 6495, + "n_pred": 6839, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9125342853411119, + "FN": 1131, + "FP": 878, + "IoU": 0.8391384418288094, + "TN": 467991, + "TP": 10480, + "n_pred": 11358, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8474669100867184, + "FN": 1020, + "FP": 651, + "IoU": 0.7353080944083636, + "TN": 474167, + "TP": 4642, + "n_pred": 5293, + "n_ref": 5662 + }, + "3": { + "Dice": 0.9024144869215291, + "FN": 115, + "FP": 467, + "IoU": 0.8221814848762603, + "TN": 477207, + "TP": 2691, + "n_pred": 3158, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8628038182839113, + "FN": 4538, + "FP": 593, + "IoU": 0.7587114977662827, + "TN": 623375, + "TP": 16134, + "n_pred": 16727, + "n_ref": 20672 + }, + "2": { + "Dice": 0.831107086257641, + "FN": 1724, + "FP": 1260, + "IoU": 0.7110207243850475, + "TN": 634314, + "TP": 7342, + "n_pred": 8602, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9570896210751577, + "FN": 1028, + "FP": 135, + "IoU": 0.9177103233566829, + "TN": 630507, + "TP": 12970, + "n_pred": 13105, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8852682527779672, + "FN": 2346, + "FP": 1020, + "IoU": 0.7941536203522505, + "TN": 628288, + "TP": 12986, + "n_pred": 14006, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8896667963179048, + "FN": 1873, + "FP": 680, + "IoU": 0.8012610929472209, + "TN": 631794, + "TP": 10293, + "n_pred": 10973, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9349348063459438, + "FN": 284, + "FP": 729, + "IoU": 0.8778193221565553, + "TN": 636349, + "TP": 7278, + "n_pred": 8007, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8968395407069863, + "FN": 2174, + "FP": 2399, + "IoU": 0.8129728845445994, + "TN": 540029, + "TP": 19878, + "n_pred": 22277, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7450755840586349, + "FN": 1216, + "FP": 1010, + "IoU": 0.5937214820222668, + "TN": 559001, + "TP": 3253, + "n_pred": 4263, + "n_ref": 4469 + }, + "3": { + "Dice": 0.943868015724689, + "FN": 574, + "FP": 297, + "IoU": 0.8937027092994875, + "TN": 556286, + "TP": 7323, + "n_pred": 7620, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6655415638928556, + "FN": 742, + "FP": 6987, + "IoU": 0.49873532654517155, + "TN": 549061, + "TP": 7690, + "n_pred": 14677, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8397174410506417, + "FN": 643, + "FP": 968, + "IoU": 0.7237180586520322, + "TN": 558649, + "TP": 4220, + "n_pred": 5188, + "n_ref": 4863 + }, + "3": { + "Dice": 0.902632678646051, + "FN": 212, + "FP": 487, + "IoU": 0.8225437928408226, + "TN": 560541, + "TP": 3240, + "n_pred": 3727, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8870476422566103, + "FN": 295, + "FP": 1559, + "IoU": 0.7970221151740748, + "TN": 409746, + "TP": 7280, + "n_pred": 8839, + "n_ref": 7575 + }, + "2": { + "Dice": 0.675622283682339, + "FN": 1146, + "FP": 496, + "IoU": 0.5101431980906921, + "TN": 415528, + "TP": 1710, + "n_pred": 2206, + "n_ref": 2856 + }, + "3": { + "Dice": 0.9008908685968819, + "FN": 154, + "FP": 736, + "IoU": 0.8196555217831814, + "TN": 413945, + "TP": 4045, + "n_pred": 4781, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.782927047057773, + "FN": 353, + "FP": 2078, + "IoU": 0.6432868672046955, + "TN": 412065, + "TP": 4384, + "n_pred": 6462, + "n_ref": 4737 + }, + "2": { + "Dice": 0.5971165398478174, + "FN": 1502, + "FP": 510, + "IoU": 0.4256351698544105, + "TN": 415377, + "TP": 1491, + "n_pred": 2001, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8443219838614446, + "FN": 238, + "FP": 553, + "IoU": 0.7305858310626703, + "TN": 415944, + "TP": 2145, + "n_pred": 2698, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9360320380993614, + "FN": 594, + "FP": 1179, + "IoU": 0.8797558494404883, + "TN": 481765, + "TP": 12972, + "n_pred": 14151, + "n_ref": 13566 + }, + "2": { + "Dice": 0.880868314371649, + "FN": 936, + "FP": 886, + "IoU": 0.7870997896704838, + "TN": 487952, + "TP": 6736, + "n_pred": 7622, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9612741635090875, + "FN": 288, + "FP": 315, + "IoU": 0.9254358847533077, + "TN": 488423, + "TP": 7484, + "n_pred": 7799, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9162315216591895, + "FN": 804, + "FP": 1474, + "IoU": 0.8454125950054289, + "TN": 481774, + "TP": 12458, + "n_pred": 13932, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8772821270310192, + "FN": 1052, + "FP": 1025, + "IoU": 0.7813914324807915, + "TN": 487009, + "TP": 7424, + "n_pred": 8449, + "n_ref": 8476 + }, + "3": { + "Dice": 0.9202164562231164, + "FN": 84, + "FP": 491, + "IoU": 0.8522230789000257, + "TN": 492619, + "TP": 3316, + "n_pred": 3807, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_004/summary_cross_val.json b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_004/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..f1e03420c5f2ba19e781eb2bf455660ed7f21b41 --- /dev/null +++ b/nnActive_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/loop_004/summary_cross_val.json @@ -0,0 +1,5532 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8490443812345809, + "FN": 49.54022988505747, + "FP": 51.89655172413793, + "IoU": 0.7666345335571337, + "TN": 2119.045977011494, + "TP": 427.7931034482759, + "n_pred": 479.6896551724138, + "n_ref": 477.3333333333333 + }, + "mean": { + "1": { + "Dice": 0.7549723311632249, + "FN": 58.41379310344828, + "FP": 51.62068965517241, + "IoU": 0.6618788489843428, + "TN": 2272.896551724138, + "TP": 265.3448275862069, + "n_pred": 316.9655172413793, + "n_ref": 323.7586206896552 + }, + "2": { + "Dice": 0.864642531565748, + "FN": 69.75862068965517, + "FP": 62.55172413793103, + "IoU": 0.7671705121529422, + "TN": 2080.1724137931033, + "TP": 435.7931034482759, + "n_pred": 498.3448275862069, + "n_ref": 505.55172413793105 + }, + "3": { + "Dice": 0.9275182809747698, + "FN": 20.448275862068964, + "FP": 41.51724137931034, + "IoU": 0.8708542395341163, + "TN": 2004.0689655172414, + "TP": 582.2413793103449, + "n_pred": 623.7586206896551, + "n_ref": 602.6896551724138 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8926746166950597, + "FN": 0, + "FP": 126, + "IoU": 0.8061538461538461, + "TN": 2550, + "TP": 524, + "n_pred": 650, + "n_ref": 524 + }, + "2": { + "Dice": 0.8248232521602514, + "FN": 79, + "FP": 144, + "IoU": 0.7018716577540107, + "TN": 2452, + "TP": 525, + "n_pred": 669, + "n_ref": 604 + }, + "3": { + "Dice": 0.8831168831168831, + "FN": 3, + "FP": 60, + "IoU": 0.7906976744186046, + "TN": 2899, + "TP": 238, + "n_pred": 298, + "n_ref": 241 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.36363636363636365, + "FN": 7, + "FP": 0, + "IoU": 0.2222222222222222, + "TN": 791, + "TP": 2, + "n_pred": 2, + "n_ref": 9 + }, + "2": { + "Dice": 0.7571115973741794, + "FN": 76, + "FP": 35, + "IoU": 0.6091549295774648, + "TN": 516, + "TP": 173, + "n_pred": 208, + "n_ref": 249 + }, + "3": { + "Dice": 0.918774966711052, + "FN": 8, + "FP": 53, + "IoU": 0.8497536945812808, + "TN": 394, + "TP": 345, + "n_pred": 398, + "n_ref": 353 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7375565610859729, + "FN": 16, + "FP": 332, + "IoU": 0.5842293906810035, + "TN": 2363, + "TP": 489, + "n_pred": 821, + "n_ref": 505 + }, + "2": { + "Dice": 0.8538812785388128, + "FN": 105, + "FP": 87, + "IoU": 0.7450199203187251, + "TN": 2447, + "TP": 561, + "n_pred": 648, + "n_ref": 666 + }, + "3": { + "Dice": 0.9349775784753364, + "FN": 20, + "FP": 38, + "IoU": 0.8778947368421053, + "TN": 2725, + "TP": 417, + "n_pred": 455, + "n_ref": 437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 3199, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": 0.8530901722391084, + "FN": 14, + "FP": 131, + "IoU": 0.7438162544169611, + "TN": 2634, + "TP": 421, + "n_pred": 552, + "n_ref": 435 + }, + "3": { + "Dice": 0.9766390354182366, + "FN": 17, + "FP": 14, + "IoU": 0.9543446244477173, + "TN": 2521, + "TP": 648, + "n_pred": 662, + "n_ref": 665 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7597765363128491, + "FN": 16, + "FP": 113, + "IoU": 0.6126126126126126, + "TN": 2867, + "TP": 204, + "n_pred": 317, + "n_ref": 220 + }, + "2": { + "Dice": 0.8086225026288117, + "FN": 341, + "FP": 23, + "IoU": 0.678729037952339, + "TN": 2067, + "TP": 769, + "n_pred": 792, + "n_ref": 1110 + }, + "3": { + "Dice": 0.7256637168141593, + "FN": 32, + "FP": 92, + "IoU": 0.5694444444444444, + "TN": 2912, + "TP": 164, + "n_pred": 256, + "n_ref": 196 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5066666666666667, + "FN": 477, + "FP": 4, + "IoU": 0.3392857142857143, + "TN": 3272, + "TP": 247, + "n_pred": 251, + "n_ref": 724 + }, + "2": { + "Dice": 0.8717616580310881, + "FN": 23, + "FP": 175, + "IoU": 0.7726750861079219, + "TN": 3129, + "TP": 673, + "n_pred": 848, + "n_ref": 696 + }, + "3": { + "Dice": 0.9431664411366711, + "FN": 80, + "FP": 4, + "IoU": 0.8924455825864277, + "TN": 3219, + "TP": 697, + "n_pred": 701, + "n_ref": 777 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8807339449541285, + "FN": 0, + "FP": 13, + "IoU": 0.7868852459016393, + "TN": 2339, + "TP": 48, + "n_pred": 61, + "n_ref": 48 + }, + "2": { + "Dice": 0.8189655172413793, + "FN": 71, + "FP": 55, + "IoU": 0.6934306569343066, + "TN": 1989, + "TP": 285, + "n_pred": 340, + "n_ref": 356 + }, + "3": { + "Dice": 0.9695090439276486, + "FN": 4, + "FP": 55, + "IoU": 0.9408224674022067, + "TN": 1403, + "TP": 938, + "n_pred": 993, + "n_ref": 942 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.14285714285714285, + "FN": 24, + "FP": 0, + "IoU": 0.07692307692307693, + "TN": 3174, + "TP": 2, + "n_pred": 2, + "n_ref": 26 + }, + "2": { + "Dice": 0.8856126080325368, + "FN": 54, + "FP": 171, + "IoU": 0.7947080291970803, + "TN": 2104, + "TP": 871, + "n_pred": 1042, + "n_ref": 925 + }, + "3": { + "Dice": 0.9710430137756536, + "FN": 51, + "FP": 52, + "IoU": 0.9437158469945355, + "TN": 1370, + "TP": 1727, + "n_pred": 1779, + "n_ref": 1778 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.972636815920398, + "FN": 13, + "FP": 9, + "IoU": 0.9467312348668281, + "TN": 2787, + "TP": 391, + "n_pred": 400, + "n_ref": 404 + }, + "2": { + "Dice": 0.9155495978552279, + "FN": 114, + "FP": 12, + "IoU": 0.8442521631644005, + "TN": 2391, + "TP": 683, + "n_pred": 695, + "n_ref": 797 + }, + "3": { + "Dice": 0.8804733727810651, + "FN": 0, + "FP": 101, + "IoU": 0.7864693446088795, + "TN": 2727, + "TP": 372, + "n_pred": 473, + "n_ref": 372 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8827586206896552, + "FN": 1, + "FP": 33, + "IoU": 0.7901234567901234, + "TN": 1438, + "TP": 128, + "n_pred": 161, + "n_ref": 129 + }, + "2": { + "Dice": 0.9142857142857143, + "FN": 9, + "FP": 18, + "IoU": 0.8421052631578947, + "TN": 1429, + "TP": 144, + "n_pred": 162, + "n_ref": 153 + }, + "3": { + "Dice": 0.8571428571428571, + "FN": 0, + "FP": 1, + "IoU": 0.75, + "TN": 1596, + "TP": 3, + "n_pred": 4, + "n_ref": 3 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9407582938388626, + "FN": 123, + "FP": 27, + "IoU": 0.8881431767337807, + "TN": 1859, + "TP": 1191, + "n_pred": 1218, + "n_ref": 1314 + }, + "2": { + "Dice": 0.9183955739972337, + "FN": 20, + "FP": 39, + "IoU": 0.8491048593350383, + "TN": 2809, + "TP": 332, + "n_pred": 371, + "n_ref": 352 + }, + "3": { + "Dice": 0.9699570815450643, + "FN": 26, + "FP": 2, + "IoU": 0.9416666666666667, + "TN": 2720, + "TP": 452, + "n_pred": 454, + "n_ref": 478 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.905144694533762, + "FN": 9, + "FP": 109, + "IoU": 0.8267254038179148, + "TN": 919, + "TP": 563, + "n_pred": 672, + "n_ref": 572 + }, + "2": { + "Dice": 0.6898550724637681, + "FN": 107, + "FP": 0, + "IoU": 0.5265486725663717, + "TN": 1374, + "TP": 119, + "n_pred": 119, + "n_ref": 226 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9315068493150684, + "FN": 22, + "FP": 28, + "IoU": 0.8717948717948718, + "TN": 2810, + "TP": 340, + "n_pred": 368, + "n_ref": 362 + }, + "2": { + "Dice": 0.8428428428428428, + "FN": 80, + "FP": 77, + "IoU": 0.7283737024221453, + "TN": 2622, + "TP": 421, + "n_pred": 498, + "n_ref": 501 + }, + "3": { + "Dice": 0.9505050505050505, + "FN": 36, + "FP": 62, + "IoU": 0.9056785370548605, + "TN": 2161, + "TP": 941, + "n_pred": 1003, + "n_ref": 977 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5608815426997246, + "FN": 796, + "FP": 1, + "IoU": 0.389739663093415, + "TN": 2694, + "TP": 509, + "n_pred": 510, + "n_ref": 1305 + }, + "2": { + "Dice": 0.8705583756345178, + "FN": 12, + "FP": 90, + "IoU": 0.7707865168539326, + "TN": 3555, + "TP": 343, + "n_pred": 433, + "n_ref": 355 + }, + "3": { + "Dice": 0.9791404875596884, + "FN": 74, + "FP": 9, + "IoU": 0.9591334318069916, + "TN": 1969, + "TP": 1948, + "n_pred": 1957, + "n_ref": 2022 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9, + "FN": 1, + "FP": 33, + "IoU": 0.8181818181818182, + "TN": 3013, + "TP": 153, + "n_pred": 186, + "n_ref": 154 + }, + "2": { + "Dice": 0.8336079077429983, + "FN": 150, + "FP": 52, + "IoU": 0.7146892655367232, + "TN": 2492, + "TP": 506, + "n_pred": 558, + "n_ref": 656 + }, + "3": { + "Dice": 0.9364548494983278, + "FN": 2, + "FP": 131, + "IoU": 0.8805031446540881, + "TN": 2087, + "TP": 980, + "n_pred": 1111, + "n_ref": 982 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8585732165206508, + "FN": 47, + "FP": 179, + "IoU": 0.7521929824561403, + "TN": 2288, + "TP": 686, + "n_pred": 865, + "n_ref": 733 + }, + "2": { + "Dice": 0.706959706959707, + "FN": 140, + "FP": 180, + "IoU": 0.546742209631728, + "TN": 2494, + "TP": 386, + "n_pred": 566, + "n_ref": 526 + }, + "3": { + "Dice": 0.8814531548757171, + "FN": 0, + "FP": 124, + "IoU": 0.788034188034188, + "TN": 2615, + "TP": 461, + "n_pred": 585, + "n_ref": 461 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7177121771217713, + "FN": 9, + "FP": 297, + "IoU": 0.5597122302158274, + "TN": 905, + "TP": 389, + "n_pred": 686, + "n_ref": 398 + }, + "2": { + "Dice": 0.864516129032258, + "FN": 3, + "FP": 60, + "IoU": 0.7613636363636364, + "TN": 1336, + "TP": 201, + "n_pred": 261, + "n_ref": 204 + }, + "3": { + "Dice": 0.7317073170731707, + "FN": 33, + "FP": 0, + "IoU": 0.5769230769230769, + "TN": 1522, + "TP": 45, + "n_pred": 45, + "n_ref": 78 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9233716475095786, + "FN": 9, + "FP": 31, + "IoU": 0.8576512455516014, + "TN": 1319, + "TP": 241, + "n_pred": 272, + "n_ref": 250 + }, + "3": { + "Dice": 0.9514563106796117, + "FN": 20, + "FP": 0, + "IoU": 0.9074074074074074, + "TN": 1384, + "TP": 196, + "n_pred": 196, + "n_ref": 216 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8754716981132076, + "FN": 22, + "FP": 44, + "IoU": 0.7785234899328859, + "TN": 1302, + "TP": 232, + "n_pred": 276, + "n_ref": 254 + }, + "3": { + "Dice": 0.9516539440203562, + "FN": 24, + "FP": 14, + "IoU": 0.9077669902912622, + "TN": 1188, + "TP": 374, + "n_pred": 388, + "n_ref": 398 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9281437125748503, + "FN": 48, + "FP": 0, + "IoU": 0.8659217877094972, + "TN": 3642, + "TP": 310, + "n_pred": 310, + "n_ref": 358 + }, + "2": { + "Dice": 0.9205426356589147, + "FN": 77, + "FP": 87, + "IoU": 0.8527827648114902, + "TN": 2886, + "TP": 950, + "n_pred": 1037, + "n_ref": 1027 + }, + "3": { + "Dice": 0.9464788732394366, + "FN": 29, + "FP": 47, + "IoU": 0.8983957219251337, + "TN": 3252, + "TP": 672, + "n_pred": 719, + "n_ref": 701 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9174311926605505, + "FN": 0, + "FP": 9, + "IoU": 0.847457627118644, + "TN": 1541, + "TP": 50, + "n_pred": 59, + "n_ref": 50 + }, + "2": { + "Dice": 0.8612612612612612, + "FN": 28, + "FP": 49, + "IoU": 0.7563291139240507, + "TN": 1284, + "TP": 239, + "n_pred": 288, + "n_ref": 267 + }, + "3": { + "Dice": 0.9817423056859677, + "FN": 16, + "FP": 19, + "IoU": 0.9641393442622951, + "TN": 624, + "TP": 941, + "n_pred": 960, + "n_ref": 957 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9539748953974896, + "FN": 52, + "FP": 3, + "IoU": 0.912, + "TN": 2575, + "TP": 570, + "n_pred": 573, + "n_ref": 622 + }, + "2": { + "Dice": 0.9387144992526159, + "FN": 22, + "FP": 19, + "IoU": 0.8845070422535212, + "TN": 2845, + "TP": 314, + "n_pred": 333, + "n_ref": 336 + }, + "3": { + "Dice": 0.9561200923787528, + "FN": 1, + "FP": 18, + "IoU": 0.915929203539823, + "TN": 2974, + "TP": 207, + "n_pred": 225, + "n_ref": 208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.946058091286307, + "FN": 10, + "FP": 16, + "IoU": 0.8976377952755905, + "TN": 1346, + "TP": 228, + "n_pred": 244, + "n_ref": 238 + }, + "3": { + "Dice": 0.978494623655914, + "FN": 14, + "FP": 10, + "IoU": 0.9578947368421052, + "TN": 1030, + "TP": 546, + "n_pred": 556, + "n_ref": 560 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8085106382978723, + "FN": 26, + "FP": 1, + "IoU": 0.6785714285714286, + "TN": 1516, + "TP": 57, + "n_pred": 58, + "n_ref": 83 + }, + "2": { + "Dice": 0.8743169398907104, + "FN": 59, + "FP": 33, + "IoU": 0.7766990291262136, + "TN": 1188, + "TP": 320, + "n_pred": 353, + "n_ref": 379 + }, + "3": { + "Dice": 0.9285714285714286, + "FN": 5, + "FP": 35, + "IoU": 0.8666666666666667, + "TN": 1300, + "TP": 260, + "n_pred": 295, + "n_ref": 265 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8523206751054853, + "FN": 0, + "FP": 140, + "IoU": 0.7426470588235294, + "TN": 1856, + "TP": 404, + "n_pred": 544, + "n_ref": 404 + }, + "2": { + "Dice": 0.9585152838427947, + "FN": 16, + "FP": 22, + "IoU": 0.9203354297693921, + "TN": 1923, + "TP": 439, + "n_pred": 461, + "n_ref": 455 + }, + "3": { + "Dice": 0.9528619528619529, + "FN": 14, + "FP": 14, + "IoU": 0.909967845659164, + "TN": 2089, + "TP": 283, + "n_pred": 297, + "n_ref": 297 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9700948212983224, + "FN": 27, + "FP": 14, + "IoU": 0.9419263456090652, + "TN": 1694, + "TP": 665, + "n_pred": 679, + "n_ref": 692 + }, + "3": { + "Dice": 0.972972972972973, + "FN": 6, + "FP": 18, + "IoU": 0.9473684210526315, + "TN": 1944, + "TP": 432, + "n_pred": 450, + "n_ref": 438 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9501084598698482, + "FN": 7, + "FP": 39, + "IoU": 0.9049586776859504, + "TN": 3516, + "TP": 438, + "n_pred": 477, + "n_ref": 445 + }, + "2": { + "Dice": 0.8846584546472565, + "FN": 147, + "FP": 59, + "IoU": 0.7931726907630522, + "TN": 3004, + "TP": 790, + "n_pred": 849, + "n_ref": 937 + }, + "3": { + "Dice": 0.9612334801762115, + "FN": 38, + "FP": 50, + "IoU": 0.9253604749787956, + "TN": 2821, + "TP": 1091, + "n_pred": 1141, + "n_ref": 1129 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8427037271004422, + "FN": 180, + "FP": 69, + "IoU": 0.7281659388646288, + "TN": 1484, + "TP": 667, + "n_pred": 736, + "n_ref": 847 + }, + "3": { + "Dice": 0.908102766798419, + "FN": 31, + "FP": 155, + "IoU": 0.8316742081447964, + "TN": 1295, + "TP": 919, + "n_pred": 1074, + "n_ref": 950 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8484848484848485, + "FN": 28, + "FP": 22, + "IoU": 0.7368421052631579, + "TN": 2210, + "TP": 140, + "n_pred": 162, + "n_ref": 168 + }, + "3": { + "Dice": 0.9710982658959537, + "FN": 9, + "FP": 26, + "IoU": 0.9438202247191011, + "TN": 1777, + "TP": 588, + "n_pred": 614, + "n_ref": 597 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8198885633457137, + "FN": 33.67816091954023, + "FP": 36.13793103448276, + "IoU": 0.7491485202081037, + "TN": 1953.7011494252874, + "TP": 348.8965517241379, + "n_pred": 385.0344827586207, + "n_ref": 382.57471264367814 + }, + "mean": { + "1": { + "Dice": 0.7358876321572333, + "FN": 27.413793103448278, + "FP": 26.724137931034484, + "IoU": 0.6793076455541643, + "TN": 2066.5862068965516, + "TP": 251.68965517241378, + "n_pred": 278.41379310344826, + "n_ref": 279.1034482758621 + }, + "2": { + "Dice": 0.8546905409253154, + "FN": 43.03448275862069, + "FP": 54.96551724137931, + "IoU": 0.7569915382630477, + "TN": 1939.551724137931, + "TP": 334.86206896551727, + "n_pred": 389.82758620689657, + "n_ref": 377.8965517241379 + }, + "3": { + "Dice": 0.8690875169545925, + "FN": 30.586206896551722, + "FP": 26.724137931034484, + "IoU": 0.8111463768070994, + "TN": 1854.9655172413793, + "TP": 460.13793103448273, + "n_pred": 486.86206896551727, + "n_ref": 490.7241379310345 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9930651872399445, + "FN": 1, + "FP": 4, + "IoU": 0.9862258953168044, + "TN": 2037, + "TP": 358, + "n_pred": 362, + "n_ref": 359 + }, + "2": { + "Dice": 0.6744186046511628, + "FN": 27, + "FP": 1, + "IoU": 0.5087719298245614, + "TN": 2343, + "TP": 29, + "n_pred": 30, + "n_ref": 56 + }, + "3": { + "Dice": 0.0, + "FN": 4, + "FP": 0, + "IoU": 0.0, + "TN": 2396, + "TP": 0, + "n_pred": 0, + "n_ref": 4 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8888888888888888, + "FN": 38, + "FP": 11, + "IoU": 0.8, + "TN": 1355, + "TP": 196, + "n_pred": 207, + "n_ref": 234 + }, + "3": { + "Dice": 0.9806451612903225, + "FN": 11, + "FP": 4, + "IoU": 0.9620253164556962, + "TN": 1205, + "TP": 380, + "n_pred": 384, + "n_ref": 391 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8723404255319149, + "FN": 53, + "FP": 7, + "IoU": 0.7735849056603774, + "TN": 1335, + "TP": 205, + "n_pred": 212, + "n_ref": 258 + }, + "3": { + "Dice": 0.9654218533886584, + "FN": 5, + "FP": 20, + "IoU": 0.9331550802139037, + "TN": 1226, + "TP": 349, + "n_pred": 369, + "n_ref": 354 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9950576606260296, + "FN": 0, + "FP": 6, + "IoU": 0.9901639344262295, + "TN": 1790, + "TP": 604, + "n_pred": 610, + "n_ref": 604 + }, + "2": { + "Dice": 0.6299019607843137, + "FN": 195, + "FP": 107, + "IoU": 0.4597495527728086, + "TN": 1841, + "TP": 257, + "n_pred": 364, + "n_ref": 452 + }, + "3": { + "Dice": 0.7438330170777988, + "FN": 135, + "FP": 0, + "IoU": 0.5921450151057401, + "TN": 2069, + "TP": 196, + "n_pred": 196, + "n_ref": 331 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9714285714285714, + "FN": 18, + "FP": 2, + "IoU": 0.9444444444444444, + "TN": 2040, + "TP": 340, + "n_pred": 342, + "n_ref": 358 + }, + "2": { + "Dice": 0.8983688833124216, + "FN": 10, + "FP": 71, + "IoU": 0.8154897494305239, + "TN": 1961, + "TP": 358, + "n_pred": 429, + "n_ref": 368 + }, + "3": { + "Dice": 0.9818181818181818, + "FN": 54, + "FP": 6, + "IoU": 0.9642857142857143, + "TN": 720, + "TP": 1620, + "n_pred": 1626, + "n_ref": 1674 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9782971619365609, + "FN": 11, + "FP": 15, + "IoU": 0.9575163398692811, + "TN": 1788, + "TP": 586, + "n_pred": 601, + "n_ref": 597 + }, + "2": { + "Dice": 0.9613168724279836, + "FN": 31, + "FP": 16, + "IoU": 0.9255150554675119, + "TN": 1769, + "TP": 584, + "n_pred": 600, + "n_ref": 615 + }, + "3": { + "Dice": 0.9665809768637532, + "FN": 10, + "FP": 16, + "IoU": 0.9353233830845771, + "TN": 1998, + "TP": 376, + "n_pred": 392, + "n_ref": 386 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9864743011722272, + "FN": 7, + "FP": 8, + "IoU": 0.9733096085409253, + "TN": 1038, + "TP": 547, + "n_pred": 555, + "n_ref": 554 + }, + "3": { + "Dice": 0.9734151329243353, + "FN": 8, + "FP": 5, + "IoU": 0.9482071713147411, + "TN": 1349, + "TP": 238, + "n_pred": 243, + "n_ref": 246 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 3199, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": 0.9019256605463501, + "FN": 173, + "FP": 46, + "IoU": 0.8213703099510603, + "TN": 1974, + "TP": 1007, + "n_pred": 1053, + "n_ref": 1180 + }, + "3": { + "Dice": 0.9619450317124736, + "FN": 46, + "FP": 98, + "IoU": 0.9266802443991853, + "TN": 1236, + "TP": 1820, + "n_pred": 1918, + "n_ref": 1866 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9281045751633987, + "FN": 29, + "FP": 4, + "IoU": 0.8658536585365854, + "TN": 554, + "TP": 213, + "n_pred": 217, + "n_ref": 242 + }, + "3": { + "Dice": 0.9803921568627451, + "FN": 3, + "FP": 8, + "IoU": 0.9615384615384616, + "TN": 514, + "TP": 275, + "n_pred": 283, + "n_ref": 278 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8235294117647058, + "FN": 53, + "FP": 10, + "IoU": 0.7, + "TN": 2190, + "TP": 147, + "n_pred": 157, + "n_ref": 200 + }, + "2": { + "Dice": 0.8454810495626822, + "FN": 15, + "FP": 91, + "IoU": 0.7323232323232324, + "TN": 2004, + "TP": 290, + "n_pred": 381, + "n_ref": 305 + }, + "3": { + "Dice": 0.8930232558139535, + "FN": 4, + "FP": 19, + "IoU": 0.8067226890756303, + "TN": 2281, + "TP": 96, + "n_pred": 115, + "n_ref": 100 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.720763723150358, + "FN": 2, + "FP": 115, + "IoU": 0.5634328358208955, + "TN": 532, + "TP": 151, + "n_pred": 266, + "n_ref": 153 + }, + "3": { + "Dice": 0.7335640138408305, + "FN": 35, + "FP": 119, + "IoU": 0.5792349726775956, + "TN": 434, + "TP": 212, + "n_pred": 331, + "n_ref": 247 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.662771285475793, + "FN": 161, + "FP": 243, + "IoU": 0.49563046192259674, + "TN": 3199, + "TP": 397, + "n_pred": 640, + "n_ref": 558 + }, + "2": { + "Dice": 0.9282511210762332, + "FN": 42, + "FP": 22, + "IoU": 0.8661087866108786, + "TN": 3522, + "TP": 414, + "n_pred": 436, + "n_ref": 456 + }, + "3": { + "Dice": 0.42857142857142855, + "FN": 0, + "FP": 16, + "IoU": 0.2727272727272727, + "TN": 3978, + "TP": 6, + "n_pred": 22, + "n_ref": 6 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7806691449814126, + "FN": 2, + "FP": 57, + "IoU": 0.6402439024390244, + "TN": 2236, + "TP": 105, + "n_pred": 162, + "n_ref": 107 + }, + "3": { + "Dice": 0.9585531273549359, + "FN": 53, + "FP": 2, + "IoU": 0.9204052098408104, + "TN": 1709, + "TP": 636, + "n_pred": 638, + "n_ref": 689 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 95, + "IoU": 0.0, + "TN": 2305, + "TP": 0, + "n_pred": 95, + "n_ref": 0 + }, + "2": { + "Dice": 0.9600997506234414, + "FN": 9, + "FP": 23, + "IoU": 0.9232613908872902, + "TN": 1983, + "TP": 385, + "n_pred": 408, + "n_ref": 394 + }, + "3": { + "Dice": 0.9623115577889447, + "FN": 21, + "FP": 9, + "IoU": 0.927360774818402, + "TN": 1987, + "TP": 383, + "n_pred": 392, + "n_ref": 404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9117647058823529, + "FN": 30, + "FP": 0, + "IoU": 0.8378378378378378, + "TN": 2215, + "TP": 155, + "n_pred": 155, + "n_ref": 185 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient044_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient044_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7266187050359713, + "FN": 118, + "FP": 110, + "IoU": 0.5706214689265536, + "TN": 1869, + "TP": 303, + "n_pred": 413, + "n_ref": 421 + }, + "2": { + "Dice": 0.8854748603351955, + "FN": 78, + "FP": 86, + "IoU": 0.7944862155388471, + "TN": 1602, + "TP": 634, + "n_pred": 720, + "n_ref": 712 + }, + "3": { + "Dice": 0.9622266401590457, + "FN": 21, + "FP": 36, + "IoU": 0.9272030651340997, + "TN": 1617, + "TP": 726, + "n_pred": 762, + "n_ref": 747 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 81, + "IoU": 0.0, + "TN": 2319, + "TP": 0, + "n_pred": 81, + "n_ref": 0 + }, + "2": { + "Dice": 0.7890995260663507, + "FN": 2, + "FP": 176, + "IoU": 0.6516634050880626, + "TN": 1889, + "TP": 333, + "n_pred": 509, + "n_ref": 335 + }, + "3": { + "Dice": 0.9687943262411347, + "FN": 42, + "FP": 2, + "IoU": 0.9394773039889959, + "TN": 1673, + "TP": 683, + "n_pred": 685, + "n_ref": 725 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 3198, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.9257425742574258, + "FN": 41, + "FP": 79, + "IoU": 0.8617511520737328, + "TN": 2332, + "TP": 748, + "n_pred": 827, + "n_ref": 789 + }, + "3": { + "Dice": 0.9513641755634639, + "FN": 65, + "FP": 17, + "IoU": 0.9072398190045249, + "TN": 2316, + "TP": 802, + "n_pred": 819, + "n_ref": 867 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9708904109589042, + "FN": 47, + "FP": 21, + "IoU": 0.9434276206322796, + "TN": 1998, + "TP": 1134, + "n_pred": 1155, + "n_ref": 1181 + }, + "2": { + "Dice": 0.9026717557251909, + "FN": 14, + "FP": 88, + "IoU": 0.8226086956521739, + "TN": 2625, + "TP": 473, + "n_pred": 561, + "n_ref": 487 + }, + "3": { + "Dice": 0.9758656873032528, + "FN": 42, + "FP": 4, + "IoU": 0.9528688524590164, + "TN": 2224, + "TP": 930, + "n_pred": 934, + "n_ref": 972 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8341346153846154, + "FN": 115, + "FP": 23, + "IoU": 0.7154639175257732, + "TN": 1115, + "TP": 347, + "n_pred": 370, + "n_ref": 462 + }, + "2": { + "Dice": 0.7865168539325843, + "FN": 19, + "FP": 0, + "IoU": 0.6481481481481481, + "TN": 1546, + "TP": 35, + "n_pred": 35, + "n_ref": 54 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7379310344827587, + "FN": 13, + "FP": 63, + "IoU": 0.5846994535519126, + "TN": 2217, + "TP": 107, + "n_pred": 170, + "n_ref": 120 + }, + "2": { + "Dice": 0.9029126213592233, + "FN": 86, + "FP": 74, + "IoU": 0.8230088495575221, + "TN": 1496, + "TP": 744, + "n_pred": 818, + "n_ref": 830 + }, + "3": { + "Dice": 0.9472710453283997, + "FN": 6, + "FP": 51, + "IoU": 0.8998242530755711, + "TN": 1831, + "TP": 512, + "n_pred": 563, + "n_ref": 518 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9518716577540107, + "FN": 4, + "FP": 5, + "IoU": 0.9081632653061225, + "TN": 1502, + "TP": 89, + "n_pred": 94, + "n_ref": 93 + }, + "2": { + "Dice": 0.87248322147651, + "FN": 10, + "FP": 47, + "IoU": 0.7738095238095238, + "TN": 1348, + "TP": 195, + "n_pred": 242, + "n_ref": 205 + }, + "3": { + "Dice": 0.9550321199143469, + "FN": 20, + "FP": 1, + "IoU": 0.9139344262295082, + "TN": 1356, + "TP": 223, + "n_pred": 224, + "n_ref": 243 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9512893982808023, + "FN": 16, + "FP": 1, + "IoU": 0.907103825136612, + "TN": 3017, + "TP": 166, + "n_pred": 167, + "n_ref": 182 + }, + "2": { + "Dice": 0.8335195530726257, + "FN": 24, + "FP": 125, + "IoU": 0.7145593869731801, + "TN": 2678, + "TP": 373, + "n_pred": 498, + "n_ref": 397 + }, + "3": { + "Dice": 0.7233676975945017, + "FN": 22, + "FP": 300, + "IoU": 0.566621803499327, + "TN": 2457, + "TP": 421, + "n_pred": 721, + "n_ref": 443 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9500713266761769, + "FN": 23, + "FP": 12, + "IoU": 0.904891304347826, + "TN": 2032, + "TP": 333, + "n_pred": 345, + "n_ref": 356 + }, + "2": { + "Dice": 0.9573770491803278, + "FN": 2, + "FP": 11, + "IoU": 0.9182389937106918, + "TN": 2241, + "TP": 146, + "n_pred": 157, + "n_ref": 148 + }, + "3": { + "Dice": 0.875, + "FN": 2, + "FP": 0, + "IoU": 0.7777777777777778, + "TN": 2391, + "TP": 7, + "n_pred": 7, + "n_ref": 9 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8997134670487106, + "FN": 36, + "FP": 34, + "IoU": 0.8177083333333334, + "TN": 2016, + "TP": 314, + "n_pred": 348, + "n_ref": 350 + }, + "2": { + "Dice": 0.8015122873345936, + "FN": 146, + "FP": 169, + "IoU": 0.668769716088328, + "TN": 1449, + "TP": 636, + "n_pred": 805, + "n_ref": 782 + }, + "3": { + "Dice": 0.8927335640138409, + "FN": 143, + "FP": 12, + "IoU": 0.80625, + "TN": 1600, + "TP": 645, + "n_pred": 657, + "n_ref": 788 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9438596491228071, + "FN": 18, + "FP": 14, + "IoU": 0.893687707641196, + "TN": 2099, + "TP": 269, + "n_pred": 283, + "n_ref": 287 + }, + "2": { + "Dice": 0.7877094972067039, + "FN": 41, + "FP": 35, + "IoU": 0.6497695852534562, + "TN": 2183, + "TP": 141, + "n_pred": 176, + "n_ref": 182 + }, + "3": { + "Dice": 0.9805825242718447, + "FN": 17, + "FP": 27, + "IoU": 0.9619047619047619, + "TN": 1245, + "TP": 1111, + "n_pred": 1138, + "n_ref": 1128 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9294871794871795, + "FN": 44, + "FP": 0, + "IoU": 0.8682634730538922, + "TN": 2866, + "TP": 290, + "n_pred": 290, + "n_ref": 334 + }, + "2": { + "Dice": 0.7142857142857143, + "FN": 139, + "FP": 113, + "IoU": 0.5555555555555556, + "TN": 2633, + "TP": 315, + "n_pred": 428, + "n_ref": 454 + }, + "3": { + "Dice": 0.8515950069348127, + "FN": 107, + "FP": 0, + "IoU": 0.7415458937198067, + "TN": 2786, + "TP": 307, + "n_pred": 307, + "n_ref": 414 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9577464788732394, + "FN": 87, + "FP": 33, + "IoU": 0.918918918918919, + "TN": 920, + "TP": 1360, + "n_pred": 1393, + "n_ref": 1447 + }, + "2": { + "Dice": 0.9403341288782816, + "FN": 13, + "FP": 12, + "IoU": 0.8873873873873874, + "TN": 2178, + "TP": 197, + "n_pred": 209, + "n_ref": 210 + }, + "3": { + "Dice": 0.982367758186398, + "FN": 11, + "FP": 3, + "IoU": 0.9653465346534653, + "TN": 1996, + "TP": 390, + "n_pred": 393, + "n_ref": 401 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient092_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.851478830541646, + "FN": 29.275862068965512, + "FP": 37.97701149425287, + "IoU": 0.7756346065616034, + "TN": 2134.5977011494256, + "TP": 336.08045977011494, + "n_pred": 374.05747126436785, + "n_ref": 365.35632183908046 + }, + "mean": { + "1": { + "Dice": 0.8243471766257378, + "FN": 33.48275862068966, + "FP": 40.03448275862069, + "IoU": 0.7429302026936605, + "TN": 2168.3793103448274, + "TP": 296.0344827586207, + "n_pred": 336.0689655172414, + "n_ref": 329.51724137931035 + }, + "2": { + "Dice": 0.8476614076564164, + "FN": 32.758620689655174, + "FP": 49.206896551724135, + "IoU": 0.7632916385748254, + "TN": 2123.7241379310344, + "TP": 332.2413793103448, + "n_pred": 381.44827586206895, + "n_ref": 365.0 + }, + "3": { + "Dice": 0.882427907342784, + "FN": 21.586206896551722, + "FP": 24.689655172413794, + "IoU": 0.8206819784163244, + "TN": 2111.689655172414, + "TP": 379.9655172413793, + "n_pred": 404.6551724137931, + "n_ref": 401.55172413793105 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9333333333333333, + "FN": 5, + "FP": 26, + "IoU": 0.875, + "TN": 1352, + "TP": 217, + "n_pred": 243, + "n_ref": 222 + }, + "2": { + "Dice": 0.9271028037383178, + "FN": 13, + "FP": 26, + "IoU": 0.8641114982578397, + "TN": 1313, + "TP": 248, + "n_pred": 274, + "n_ref": 261 + }, + "3": { + "Dice": 0.9090909090909091, + "FN": 20, + "FP": 0, + "IoU": 0.8333333333333334, + "TN": 1480, + "TP": 100, + "n_pred": 100, + "n_ref": 120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9105180533751962, + "FN": 30, + "FP": 27, + "IoU": 0.8357348703170029, + "TN": 1253, + "TP": 290, + "n_pred": 317, + "n_ref": 320 + }, + "2": { + "Dice": 0.9071803852889667, + "FN": 35, + "FP": 18, + "IoU": 0.8301282051282052, + "TN": 1288, + "TP": 259, + "n_pred": 277, + "n_ref": 294 + }, + "3": { + "Dice": 0.3076923076923077, + "FN": 18, + "FP": 0, + "IoU": 0.18181818181818182, + "TN": 1578, + "TP": 4, + "n_pred": 4, + "n_ref": 22 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8636363636363636, + "FN": 85, + "FP": 17, + "IoU": 0.76, + "TN": 2775, + "TP": 323, + "n_pred": 340, + "n_ref": 408 + }, + "2": { + "Dice": 0.8192032686414709, + "FN": 19, + "FP": 158, + "IoU": 0.6937716262975778, + "TN": 2622, + "TP": 401, + "n_pred": 559, + "n_ref": 420 + }, + "3": { + "Dice": 0.9170464904284412, + "FN": 85, + "FP": 6, + "IoU": 0.8468013468013468, + "TN": 2606, + "TP": 503, + "n_pred": 509, + "n_ref": 588 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9758241758241758, + "FN": 9, + "FP": 2, + "IoU": 0.9527896995708155, + "TN": 2167, + "TP": 222, + "n_pred": 224, + "n_ref": 231 + }, + "2": { + "Dice": 0.919047619047619, + "FN": 11, + "FP": 23, + "IoU": 0.8502202643171806, + "TN": 2173, + "TP": 193, + "n_pred": 216, + "n_ref": 204 + }, + "3": { + "Dice": 0.9901075268817204, + "FN": 14, + "FP": 9, + "IoU": 0.9804088586030665, + "TN": 1226, + "TP": 1151, + "n_pred": 1160, + "n_ref": 1165 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9952348536419333, + "FN": 7, + "FP": 0, + "IoU": 0.9905149051490515, + "TN": 1662, + "TP": 731, + "n_pred": 731, + "n_ref": 738 + }, + "2": { + "Dice": 0.8659476117103235, + "FN": 0, + "FP": 87, + "IoU": 0.7635869565217391, + "TN": 2032, + "TP": 281, + "n_pred": 368, + "n_ref": 281 + }, + "3": { + "Dice": 0.9679521998913634, + "FN": 59, + "FP": 0, + "IoU": 0.9378947368421052, + "TN": 1450, + "TP": 891, + "n_pred": 891, + "n_ref": 950 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7378640776699029, + "FN": 0, + "FP": 27, + "IoU": 0.5846153846153846, + "TN": 3935, + "TP": 38, + "n_pred": 65, + "n_ref": 38 + }, + "2": { + "Dice": 0.9135135135135135, + "FN": 52, + "FP": 12, + "IoU": 0.8407960199004975, + "TN": 3598, + "TP": 338, + "n_pred": 350, + "n_ref": 390 + }, + "3": { + "Dice": 0.9572649572649573, + "FN": 8, + "FP": 17, + "IoU": 0.9180327868852459, + "TN": 3695, + "TP": 280, + "n_pred": 297, + "n_ref": 288 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9201995012468828, + "FN": 59, + "FP": 5, + "IoU": 0.8521939953810623, + "TN": 1967, + "TP": 369, + "n_pred": 374, + "n_ref": 428 + }, + "2": { + "Dice": 0.8755656108597285, + "FN": 10, + "FP": 210, + "IoU": 0.778672032193159, + "TN": 1406, + "TP": 774, + "n_pred": 984, + "n_ref": 784 + }, + "3": { + "Dice": 0.6639757820383451, + "FN": 76, + "FP": 257, + "IoU": 0.49697885196374625, + "TN": 1738, + "TP": 329, + "n_pred": 586, + "n_ref": 405 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7833827893175074, + "FN": 17, + "FP": 56, + "IoU": 0.6439024390243903, + "TN": 2195, + "TP": 132, + "n_pred": 188, + "n_ref": 149 + }, + "3": { + "Dice": 0.9531116794543905, + "FN": 55, + "FP": 0, + "IoU": 0.9104234527687296, + "TN": 1786, + "TP": 559, + "n_pred": 559, + "n_ref": 614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6707317073170732, + "FN": 12, + "FP": 150, + "IoU": 0.5045871559633027, + "TN": 2873, + "TP": 165, + "n_pred": 315, + "n_ref": 177 + }, + "2": { + "Dice": 0.9470967741935484, + "FN": 11, + "FP": 30, + "IoU": 0.8995098039215687, + "TN": 2792, + "TP": 367, + "n_pred": 397, + "n_ref": 378 + }, + "3": { + "Dice": 0.9309090909090909, + "FN": 8, + "FP": 11, + "IoU": 0.8707482993197279, + "TN": 3053, + "TP": 128, + "n_pred": 139, + "n_ref": 136 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7216494845360825, + "FN": 9, + "FP": 396, + "IoU": 0.5645161290322581, + "TN": 1470, + "TP": 525, + "n_pred": 921, + "n_ref": 534 + }, + "2": { + "Dice": 0.7671232876712328, + "FN": 17, + "FP": 0, + "IoU": 0.6222222222222222, + "TN": 2355, + "TP": 28, + "n_pred": 28, + "n_ref": 45 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9531795946890287, + "FN": 9, + "FP": 58, + "IoU": 0.910547396528705, + "TN": 3251, + "TP": 682, + "n_pred": 740, + "n_ref": 691 + }, + "2": { + "Dice": 0.0, + "FN": 2, + "FP": 0, + "IoU": 0.0, + "TN": 3998, + "TP": 0, + "n_pred": 0, + "n_ref": 2 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 4000, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9727626459143969, + "FN": 20, + "FP": 8, + "IoU": 0.946969696969697, + "TN": 1072, + "TP": 500, + "n_pred": 508, + "n_ref": 520 + }, + "2": { + "Dice": 0.8861283643892339, + "FN": 36, + "FP": 74, + "IoU": 0.7955390334572491, + "TN": 1062, + "TP": 428, + "n_pred": 502, + "n_ref": 464 + }, + "3": { + "Dice": 0.9488465396188566, + "FN": 17, + "FP": 34, + "IoU": 0.9026717557251909, + "TN": 1076, + "TP": 473, + "n_pred": 507, + "n_ref": 490 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8, + "FN": 0, + "FP": 3, + "IoU": 0.6666666666666666, + "TN": 791, + "TP": 6, + "n_pred": 9, + "n_ref": 6 + }, + "2": { + "Dice": 0.9300699300699301, + "FN": 20, + "FP": 20, + "IoU": 0.869281045751634, + "TN": 494, + "TP": 266, + "n_pred": 286, + "n_ref": 286 + }, + "3": { + "Dice": 0.9738430583501007, + "FN": 0, + "FP": 13, + "IoU": 0.9490196078431372, + "TN": 545, + "TP": 242, + "n_pred": 255, + "n_ref": 242 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9359165424739195, + "FN": 41, + "FP": 2, + "IoU": 0.8795518207282913, + "TN": 2043, + "TP": 314, + "n_pred": 316, + "n_ref": 355 + }, + "3": { + "Dice": 0.4186046511627907, + "FN": 0, + "FP": 25, + "IoU": 0.2647058823529412, + "TN": 2366, + "TP": 9, + "n_pred": 34, + "n_ref": 9 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8469750889679716, + "FN": 15, + "FP": 28, + "IoU": 0.7345679012345679, + "TN": 2238, + "TP": 119, + "n_pred": 147, + "n_ref": 134 + }, + "2": { + "Dice": 0.9601226993865031, + "FN": 18, + "FP": 34, + "IoU": 0.9233038348082596, + "TN": 1722, + "TP": 626, + "n_pred": 660, + "n_ref": 644 + }, + "3": { + "Dice": 0.8609271523178808, + "FN": 7, + "FP": 14, + "IoU": 0.7558139534883721, + "TN": 2314, + "TP": 65, + "n_pred": 79, + "n_ref": 72 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 2398, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.9042995839112344, + "FN": 22, + "FP": 47, + "IoU": 0.8253164556962025, + "TN": 2005, + "TP": 326, + "n_pred": 373, + "n_ref": 348 + }, + "3": { + "Dice": 0.9834546657842489, + "FN": 23, + "FP": 2, + "IoU": 0.9674479166666666, + "TN": 1632, + "TP": 743, + "n_pred": 745, + "n_ref": 766 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9395711500974658, + "FN": 31, + "FP": 0, + "IoU": 0.8860294117647058, + "TN": 2128, + "TP": 241, + "n_pred": 241, + "n_ref": 272 + }, + "2": { + "Dice": 0.8959537572254336, + "FN": 3, + "FP": 33, + "IoU": 0.8115183246073299, + "TN": 2209, + "TP": 155, + "n_pred": 188, + "n_ref": 158 + }, + "3": { + "Dice": 0.984472049689441, + "FN": 7, + "FP": 3, + "IoU": 0.9694189602446484, + "TN": 2073, + "TP": 317, + "n_pred": 320, + "n_ref": 324 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9586056644880174, + "FN": 22, + "FP": 16, + "IoU": 0.9205020920502092, + "TN": 1922, + "TP": 440, + "n_pred": 456, + "n_ref": 462 + }, + "2": { + "Dice": 0.9477234401349073, + "FN": 9, + "FP": 53, + "IoU": 0.9006410256410257, + "TN": 1776, + "TP": 562, + "n_pred": 615, + "n_ref": 571 + }, + "3": { + "Dice": 0.9891067538126361, + "FN": 6, + "FP": 4, + "IoU": 0.978448275862069, + "TN": 1936, + "TP": 454, + "n_pred": 458, + "n_ref": 460 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6985854189336235, + "FN": 29, + "FP": 248, + "IoU": 0.5367892976588629, + "TN": 1802, + "TP": 321, + "n_pred": 569, + "n_ref": 350 + }, + "2": { + "Dice": 0.8938775510204081, + "FN": 25, + "FP": 27, + "IoU": 0.8081180811808119, + "TN": 2129, + "TP": 219, + "n_pred": 246, + "n_ref": 244 + }, + "3": { + "Dice": 0.964332892998679, + "FN": 21, + "FP": 6, + "IoU": 0.9311224489795918, + "TN": 2008, + "TP": 365, + "n_pred": 371, + "n_ref": 386 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9163879598662207, + "FN": 25, + "FP": 0, + "IoU": 0.845679012345679, + "TN": 3038, + "TP": 137, + "n_pred": 137, + "n_ref": 162 + }, + "2": { + "Dice": 0.9443207126948775, + "FN": 22, + "FP": 3, + "IoU": 0.8945147679324894, + "TN": 2963, + "TP": 212, + "n_pred": 215, + "n_ref": 234 + }, + "3": { + "Dice": 0.964769647696477, + "FN": 1, + "FP": 12, + "IoU": 0.9319371727748691, + "TN": 3009, + "TP": 178, + "n_pred": 190, + "n_ref": 179 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.89520624303233, + "FN": 170, + "FP": 18, + "IoU": 0.8102926337033299, + "TN": 1409, + "TP": 803, + "n_pred": 821, + "n_ref": 973 + }, + "2": { + "Dice": 0.9041095890410958, + "FN": 46, + "FP": 10, + "IoU": 0.825, + "TN": 2080, + "TP": 264, + "n_pred": 274, + "n_ref": 310 + }, + "3": { + "Dice": 0.8181818181818182, + "FN": 1, + "FP": 19, + "IoU": 0.6923076923076923, + "TN": 2335, + "TP": 45, + "n_pred": 64, + "n_ref": 46 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.41843971631205673, + "FN": 134, + "FP": 30, + "IoU": 0.2645739910313901, + "TN": 2177, + "TP": 59, + "n_pred": 89, + "n_ref": 193 + }, + "2": { + "Dice": 0.7895229186155285, + "FN": 171, + "FP": 54, + "IoU": 0.652241112828439, + "TN": 1753, + "TP": 422, + "n_pred": 476, + "n_ref": 593 + }, + "3": { + "Dice": 0.9478889311525295, + "FN": 33, + "FP": 104, + "IoU": 0.900939985538684, + "TN": 1017, + "TP": 1246, + "n_pred": 1350, + "n_ref": 1279 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9021361152508693, + "FN": 120, + "FP": 77, + "IoU": 0.8217194570135746, + "TN": 2095, + "TP": 908, + "n_pred": 985, + "n_ref": 1028 + }, + "2": { + "Dice": 0.8943231441048035, + "FN": 64, + "FP": 57, + "IoU": 0.8088467614533965, + "TN": 2567, + "TP": 512, + "n_pred": 569, + "n_ref": 576 + }, + "3": { + "Dice": 0.9529860228716646, + "FN": 13, + "FP": 24, + "IoU": 0.9101941747572816, + "TN": 2788, + "TP": 375, + "n_pred": 399, + "n_ref": 388 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.926829268292683, + "FN": 73, + "FP": 2, + "IoU": 0.8636363636363636, + "TN": 3450, + "TP": 475, + "n_pred": 477, + "n_ref": 548 + }, + "2": { + "Dice": 0.8295549958018472, + "FN": 99, + "FP": 104, + "IoU": 0.7087517934002869, + "TN": 3303, + "TP": 494, + "n_pred": 598, + "n_ref": 593 + }, + "3": { + "Dice": 0.942039618488628, + "FN": 70, + "FP": 9, + "IoU": 0.8904299583911235, + "TN": 3279, + "TP": 642, + "n_pred": 651, + "n_ref": 712 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9693251533742331, + "FN": 9, + "FP": 16, + "IoU": 0.9404761904761905, + "TN": 2780, + "TP": 395, + "n_pred": 411, + "n_ref": 404 + }, + "2": { + "Dice": 0.9294696555494806, + "FN": 42, + "FP": 87, + "IoU": 0.8682328907048008, + "TN": 2221, + "TP": 850, + "n_pred": 937, + "n_ref": 892 + }, + "3": { + "Dice": 0.8949416342412452, + "FN": 29, + "FP": 25, + "IoU": 0.8098591549295775, + "TN": 2916, + "TP": 230, + "n_pred": 255, + "n_ref": 259 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6968641114982579, + "FN": 87, + "FP": 0, + "IoU": 0.5347593582887701, + "TN": 2213, + "TP": 100, + "n_pred": 100, + "n_ref": 187 + }, + "2": { + "Dice": 0.8315629742033384, + "FN": 86, + "FP": 25, + "IoU": 0.7116883116883117, + "TN": 2015, + "TP": 274, + "n_pred": 299, + "n_ref": 360 + }, + "3": { + "Dice": 0.9795240730492529, + "FN": 23, + "FP": 14, + "IoU": 0.9598698481561823, + "TN": 1478, + "TP": 885, + "n_pred": 899, + "n_ref": 908 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9334415584415584, + "FN": 4, + "FP": 78, + "IoU": 0.8751902587519026, + "TN": 2543, + "TP": 575, + "n_pred": 653, + "n_ref": 579 + }, + "3": { + "Dice": 0.9744360902255639, + "FN": 32, + "FP": 2, + "IoU": 0.9501466275659824, + "TN": 2518, + "TP": 648, + "n_pred": 650, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9848197343453511, + "FN": 11, + "FP": 5, + "IoU": 0.9700934579439252, + "TN": 1865, + "TP": 519, + "n_pred": 524, + "n_ref": 530 + }, + "2": { + "Dice": 0.5989583333333334, + "FN": 55, + "FP": 99, + "IoU": 0.4275092936802974, + "TN": 2131, + "TP": 115, + "n_pred": 214, + "n_ref": 170 + }, + "3": { + "Dice": 0.7476190476190476, + "FN": 0, + "FP": 106, + "IoU": 0.596958174904943, + "TN": 2137, + "TP": 157, + "n_pred": 263, + "n_ref": 157 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.8296637021359721, + "FN": 44.97701149425288, + "FP": 43.27586206896552, + "IoU": 0.7512337948284177, + "TN": 1885.1149425287356, + "TP": 371.4597701149425, + "n_pred": 414.7356321839081, + "n_ref": 416.43678160919535 + }, + "mean": { + "1": { + "Dice": 0.7366262228996525, + "FN": 47.41379310344828, + "FP": 46.275862068965516, + "IoU": 0.645303553938591, + "TN": 2001.3793103448277, + "TP": 249.75862068965517, + "n_pred": 296.0344827586207, + "n_ref": 297.17241379310343 + }, + "2": { + "Dice": 0.869403702434188, + "FN": 50.41379310344828, + "FP": 61.48275862068966, + "IoU": 0.7788398708792631, + "TN": 1822.9655172413793, + "TP": 409.9655172413793, + "n_pred": 471.44827586206895, + "n_ref": 460.37931034482756 + }, + "3": { + "Dice": 0.8829611810740755, + "FN": 37.10344827586207, + "FP": 22.06896551724138, + "IoU": 0.8295579596673986, + "TN": 1831.0, + "TP": 454.6551724137931, + "n_pred": 476.7241379310345, + "n_ref": 491.7586206896552 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9879294336118849, + "FN": 3, + "FP": 10, + "IoU": 0.9761467889908257, + "TN": 2655, + "TP": 532, + "n_pred": 542, + "n_ref": 535 + }, + "2": { + "Dice": 0.925, + "FN": 31, + "FP": 41, + "IoU": 0.8604651162790697, + "TN": 2684, + "TP": 444, + "n_pred": 485, + "n_ref": 475 + }, + "3": { + "Dice": 0.9727965179542981, + "FN": 23, + "FP": 2, + "IoU": 0.9470338983050848, + "TN": 2728, + "TP": 447, + "n_pred": 449, + "n_ref": 470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8579881656804734, + "FN": 16, + "FP": 80, + "IoU": 0.7512953367875648, + "TN": 1214, + "TP": 290, + "n_pred": 370, + "n_ref": 306 + }, + "2": { + "Dice": 0.8532289628180039, + "FN": 11, + "FP": 64, + "IoU": 0.7440273037542662, + "TN": 1307, + "TP": 218, + "n_pred": 282, + "n_ref": 229 + }, + "3": { + "Dice": 0.9655172413793104, + "FN": 16, + "FP": 2, + "IoU": 0.9333333333333333, + "TN": 1330, + "TP": 252, + "n_pred": 254, + "n_ref": 268 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8887700534759359, + "FN": 45, + "FP": 163, + "IoU": 0.7998075072184793, + "TN": 1361, + "TP": 831, + "n_pred": 994, + "n_ref": 876 + }, + "2": { + "Dice": 0.8817204301075269, + "FN": 9, + "FP": 57, + "IoU": 0.7884615384615384, + "TN": 2088, + "TP": 246, + "n_pred": 303, + "n_ref": 255 + }, + "3": { + "Dice": 0.9779735682819384, + "FN": 3, + "FP": 2, + "IoU": 0.9568965517241379, + "TN": 2284, + "TP": 111, + "n_pred": 113, + "n_ref": 114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7966942148760331, + "FN": 119, + "FP": 4, + "IoU": 0.6620879120879121, + "TN": 1236, + "TP": 241, + "n_pred": 245, + "n_ref": 360 + }, + "2": { + "Dice": 0.8379888268156425, + "FN": 14, + "FP": 44, + "IoU": 0.7211538461538461, + "TN": 1392, + "TP": 150, + "n_pred": 194, + "n_ref": 164 + }, + "3": { + "Dice": 0.8787878787878788, + "FN": 32, + "FP": 0, + "IoU": 0.7837837837837838, + "TN": 1452, + "TP": 116, + "n_pred": 116, + "n_ref": 148 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9298597194388778, + "FN": 0, + "FP": 35, + "IoU": 0.8689138576779026, + "TN": 533, + "TP": 232, + "n_pred": 267, + "n_ref": 232 + }, + "3": { + "Dice": 0.9842602308499475, + "FN": 15, + "FP": 0, + "IoU": 0.96900826446281, + "TN": 316, + "TP": 469, + "n_pred": 469, + "n_ref": 484 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7792207792207793, + "FN": 26, + "FP": 59, + "IoU": 0.6382978723404256, + "TN": 2165, + "TP": 150, + "n_pred": 209, + "n_ref": 176 + }, + "3": { + "Dice": 0.9625468164794008, + "FN": 14, + "FP": 26, + "IoU": 0.927797833935018, + "TN": 1846, + "TP": 514, + "n_pred": 540, + "n_ref": 528 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8904313336638572, + "FN": 2, + "FP": 219, + "IoU": 0.8025022341376229, + "TN": 2081, + "TP": 898, + "n_pred": 1117, + "n_ref": 900 + }, + "2": { + "Dice": 0.9282700421940928, + "FN": 32, + "FP": 2, + "IoU": 0.8661417322834646, + "TN": 2946, + "TP": 220, + "n_pred": 222, + "n_ref": 252 + }, + "3": { + "Dice": 0.9609856262833676, + "FN": 0, + "FP": 19, + "IoU": 0.924901185770751, + "TN": 2947, + "TP": 234, + "n_pred": 253, + "n_ref": 234 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.22549019607843138, + "FN": 3, + "FP": 155, + "IoU": 0.1270718232044199, + "TN": 2219, + "TP": 23, + "n_pred": 178, + "n_ref": 26 + }, + "2": { + "Dice": 0.7299539170506912, + "FN": 173, + "FP": 120, + "IoU": 0.5747460087082729, + "TN": 1711, + "TP": 396, + "n_pred": 516, + "n_ref": 569 + }, + "3": { + "Dice": 0.654320987654321, + "FN": 22, + "FP": 202, + "IoU": 0.48623853211009177, + "TN": 1964, + "TP": 212, + "n_pred": 414, + "n_ref": 234 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8301886792452831, + "FN": 17, + "FP": 1, + "IoU": 0.7096774193548387, + "TN": 1538, + "TP": 44, + "n_pred": 45, + "n_ref": 61 + }, + "2": { + "Dice": 0.9379779099405268, + "FN": 2, + "FP": 71, + "IoU": 0.8832, + "TN": 975, + "TP": 552, + "n_pred": 623, + "n_ref": 554 + }, + "3": { + "Dice": 0.974293059125964, + "FN": 40, + "FP": 0, + "IoU": 0.949874686716792, + "TN": 802, + "TP": 758, + "n_pred": 758, + "n_ref": 798 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.944558521560575, + "FN": 28, + "FP": 26, + "IoU": 0.8949416342412452, + "TN": 1086, + "TP": 460, + "n_pred": 486, + "n_ref": 488 + }, + "2": { + "Dice": 0.9230769230769231, + "FN": 52, + "FP": 23, + "IoU": 0.8571428571428571, + "TN": 1075, + "TP": 450, + "n_pred": 473, + "n_ref": 502 + }, + "3": { + "Dice": 0.9746524938675388, + "FN": 4, + "FP": 27, + "IoU": 0.9505582137161085, + "TN": 973, + "TP": 596, + "n_pred": 623, + "n_ref": 600 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8076923076923077, + "FN": 86, + "FP": 14, + "IoU": 0.6774193548387096, + "TN": 3690, + "TP": 210, + "n_pred": 224, + "n_ref": 296 + }, + "2": { + "Dice": 0.9008291873963515, + "FN": 127, + "FP": 172, + "IoU": 0.8195534097767049, + "TN": 2343, + "TP": 1358, + "n_pred": 1530, + "n_ref": 1485 + }, + "3": { + "Dice": 0.8079470198675497, + "FN": 228, + "FP": 62, + "IoU": 0.6777777777777778, + "TN": 3100, + "TP": 610, + "n_pred": 672, + "n_ref": 838 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5925925925925926, + "FN": 0, + "FP": 11, + "IoU": 0.42105263157894735, + "TN": 781, + "TP": 8, + "n_pred": 19, + "n_ref": 8 + }, + "2": { + "Dice": 0.9244712990936556, + "FN": 7, + "FP": 68, + "IoU": 0.8595505617977528, + "TN": 266, + "TP": 459, + "n_pred": 527, + "n_ref": 466 + }, + "3": { + "Dice": 0.0, + "FN": 14, + "FP": 0, + "IoU": 0.0, + "TN": 786, + "TP": 0, + "n_pred": 0, + "n_ref": 14 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8752584424534804, + "FN": 119, + "FP": 62, + "IoU": 0.7781862745098039, + "TN": 2384, + "TP": 635, + "n_pred": 697, + "n_ref": 754 + }, + "3": { + "Dice": 0.9178082191780822, + "FN": 62, + "FP": 10, + "IoU": 0.8481012658227848, + "TN": 2726, + "TP": 402, + "n_pred": 412, + "n_ref": 464 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.625, + "FN": 68, + "FP": 4, + "IoU": 0.45454545454545453, + "TN": 2268, + "TP": 60, + "n_pred": 64, + "n_ref": 128 + }, + "2": { + "Dice": 0.8146132918771861, + "FN": 386, + "FP": 91, + "IoU": 0.6872131147540984, + "TN": 875, + "TP": 1048, + "n_pred": 1139, + "n_ref": 1434 + }, + "3": { + "Dice": 0.8582089552238806, + "FN": 99, + "FP": 15, + "IoU": 0.7516339869281046, + "TN": 1941, + "TP": 345, + "n_pred": 360, + "n_ref": 444 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 466, + "FP": 0, + "IoU": 0.0, + "TN": 1934, + "TP": 0, + "n_pred": 0, + "n_ref": 466 + }, + "2": { + "Dice": 0.9433962264150944, + "FN": 4, + "FP": 14, + "IoU": 0.8928571428571429, + "TN": 2232, + "TP": 150, + "n_pred": 164, + "n_ref": 154 + }, + "3": { + "Dice": 0.9875, + "FN": 12, + "FP": 4, + "IoU": 0.9753086419753086, + "TN": 1752, + "TP": 632, + "n_pred": 636, + "n_ref": 644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7510431154381085, + "FN": 54, + "FP": 125, + "IoU": 0.6013363028953229, + "TN": 3551, + "TP": 270, + "n_pred": 395, + "n_ref": 324 + }, + "2": { + "Dice": 0.9472259810554804, + "FN": 14, + "FP": 25, + "IoU": 0.8997429305912596, + "TN": 3611, + "TP": 350, + "n_pred": 375, + "n_ref": 364 + }, + "3": { + "Dice": 0.9454545454545454, + "FN": 4, + "FP": 8, + "IoU": 0.896551724137931, + "TN": 3884, + "TP": 104, + "n_pred": 112, + "n_ref": 108 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7312217194570135, + "FN": 75, + "FP": 222, + "IoU": 0.5763195435092725, + "TN": 2499, + "TP": 404, + "n_pred": 626, + "n_ref": 479 + }, + "3": { + "Dice": 0.9204466154919749, + "FN": 216, + "FP": 12, + "IoU": 0.8526179702650291, + "TN": 1653, + "TP": 1319, + "n_pred": 1331, + "n_ref": 1535 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 146, + "FP": 0, + "IoU": 0.0, + "TN": 3854, + "TP": 0, + "n_pred": 0, + "n_ref": 146 + }, + "2": { + "Dice": 0.8485947416137806, + "FN": 104, + "FP": 63, + "IoU": 0.7370078740157481, + "TN": 3365, + "TP": 468, + "n_pred": 531, + "n_ref": 572 + }, + "3": { + "Dice": 0.9656709763709318, + "FN": 48, + "FP": 29, + "IoU": 0.9336206896551724, + "TN": 2840, + "TP": 1083, + "n_pred": 1112, + "n_ref": 1131 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9139784946236559, + "FN": 13, + "FP": 3, + "IoU": 0.8415841584158416, + "TN": 2299, + "TP": 85, + "n_pred": 88, + "n_ref": 98 + }, + "2": { + "Dice": 0.9159663865546218, + "FN": 27, + "FP": 33, + "IoU": 0.8449612403100775, + "TN": 2013, + "TP": 327, + "n_pred": 360, + "n_ref": 354 + }, + "3": { + "Dice": 0.9825970548862115, + "FN": 10, + "FP": 16, + "IoU": 0.9657894736842105, + "TN": 1640, + "TP": 734, + "n_pred": 750, + "n_ref": 744 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9044158747903857, + "FN": 171, + "FP": 0, + "IoU": 0.8255102040816327, + "TN": 1420, + "TP": 809, + "n_pred": 809, + "n_ref": 980 + }, + "2": { + "Dice": 0.8666666666666667, + "FN": 14, + "FP": 50, + "IoU": 0.7647058823529411, + "TN": 2128, + "TP": 208, + "n_pred": 258, + "n_ref": 222 + }, + "3": { + "Dice": 0.9705882352941176, + "FN": 3, + "FP": 11, + "IoU": 0.9428571428571428, + "TN": 2155, + "TP": 231, + "n_pred": 242, + "n_ref": 234 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8, + "FN": 0, + "FP": 97, + "IoU": 0.6666666666666666, + "TN": 1309, + "TP": 194, + "n_pred": 291, + "n_ref": 194 + }, + "3": { + "Dice": 0.9578313253012049, + "FN": 28, + "FP": 0, + "IoU": 0.9190751445086706, + "TN": 1254, + "TP": 318, + "n_pred": 318, + "n_ref": 346 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8898128898128899, + "FN": 6, + "FP": 47, + "IoU": 0.8014981273408239, + "TN": 2933, + "TP": 214, + "n_pred": 261, + "n_ref": 220 + }, + "2": { + "Dice": 0.9101796407185628, + "FN": 6, + "FP": 99, + "IoU": 0.8351648351648352, + "TN": 2563, + "TP": 532, + "n_pred": 631, + "n_ref": 538 + }, + "3": { + "Dice": 0.8318042813455657, + "FN": 51, + "FP": 4, + "IoU": 0.7120418848167539, + "TN": 3009, + "TP": 136, + "n_pred": 140, + "n_ref": 187 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient067_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9641649763353617, + "FN": 53, + "FP": 0, + "IoU": 0.9308093994778068, + "TN": 834, + "TP": 713, + "n_pred": 713, + "n_ref": 766 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9310344827586207, + "FN": 64, + "FP": 48, + "IoU": 0.8709677419354839, + "TN": 2332, + "TP": 756, + "n_pred": 804, + "n_ref": 820 + }, + "3": { + "Dice": 0.9823212913143735, + "FN": 22, + "FP": 24, + "IoU": 0.9652567975830816, + "TN": 1876, + "TP": 1278, + "n_pred": 1302, + "n_ref": 1300 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8432835820895522, + "FN": 27, + "FP": 225, + "IoU": 0.7290322580645161, + "TN": 670, + "TP": 678, + "n_pred": 903, + "n_ref": 705 + }, + "2": { + "Dice": 0.5217391304347826, + "FN": 7, + "FP": 59, + "IoU": 0.35294117647058826, + "TN": 1498, + "TP": 36, + "n_pred": 95, + "n_ref": 43 + }, + "3": { + "Dice": 0.47619047619047616, + "FN": 0, + "FP": 55, + "IoU": 0.3125, + "TN": 1520, + "TP": 25, + "n_pred": 80, + "n_ref": 25 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6582278481012658, + "FN": 27, + "FP": 216, + "IoU": 0.49056603773584906, + "TN": 1923, + "TP": 234, + "n_pred": 450, + "n_ref": 261 + }, + "2": { + "Dice": 0.905829596412556, + "FN": 32, + "FP": 10, + "IoU": 0.8278688524590164, + "TN": 2156, + "TP": 202, + "n_pred": 212, + "n_ref": 234 + }, + "3": { + "Dice": 0.9807909604519774, + "FN": 8, + "FP": 9, + "IoU": 0.9623059866962306, + "TN": 1949, + "TP": 434, + "n_pred": 443, + "n_ref": 442 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8690476190476191, + "FN": 0, + "FP": 22, + "IoU": 0.7684210526315789, + "TN": 1505, + "TP": 73, + "n_pred": 95, + "n_ref": 73 + }, + "2": { + "Dice": 0.9397967161845192, + "FN": 30, + "FP": 47, + "IoU": 0.8864306784660767, + "TN": 922, + "TP": 601, + "n_pred": 648, + "n_ref": 631 + }, + "3": { + "Dice": 0.9676531314521679, + "FN": 25, + "FP": 22, + "IoU": 0.9373333333333334, + "TN": 850, + "TP": 703, + "n_pred": 725, + "n_ref": 728 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9360730593607306, + "FN": 54, + "FP": 2, + "IoU": 0.8798283261802575, + "TN": 334, + "TP": 410, + "n_pred": 412, + "n_ref": 464 + }, + "3": { + "Dice": 0.9248554913294798, + "FN": 0, + "FP": 52, + "IoU": 0.8602150537634409, + "TN": 428, + "TP": 320, + "n_pred": 372, + "n_ref": 320 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9644670050761421, + "FN": 25, + "FP": 17, + "IoU": 0.9313725490196079, + "TN": 1788, + "TP": 570, + "n_pred": 587, + "n_ref": 595 + }, + "2": { + "Dice": 0.9041095890410958, + "FN": 42, + "FP": 105, + "IoU": 0.825, + "TN": 1560, + "TP": 693, + "n_pred": 798, + "n_ref": 735 + }, + "3": { + "Dice": 0.9391100702576113, + "FN": 77, + "FP": 27, + "IoU": 0.8852097130242825, + "TN": 1494, + "TP": 802, + "n_pred": 829, + "n_ref": 879 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.7895936265507472, + "FN": 55.77777777777777, + "FP": 33.166666666666664, + "IoU": 0.7144456174301999, + "TN": 2040.3777777777777, + "TP": 297.34444444444443, + "n_pred": 330.5111111111111, + "n_ref": 353.12222222222226 + }, + "mean": { + "1": { + "Dice": 0.6027036903272227, + "FN": 78.73333333333333, + "FP": 39.766666666666666, + "IoU": 0.5197369489634601, + "TN": 2139.0, + "TP": 169.16666666666666, + "n_pred": 208.93333333333334, + "n_ref": 247.9 + }, + "2": { + "Dice": 0.8649175962797943, + "FN": 58.96666666666667, + "FP": 35.166666666666664, + "IoU": 0.7844340437197458, + "TN": 1938.9666666666667, + "TP": 393.56666666666666, + "n_pred": 428.73333333333335, + "n_ref": 452.53333333333336 + }, + "3": { + "Dice": 0.9011595930452242, + "FN": 29.633333333333333, + "FP": 24.566666666666666, + "IoU": 0.8391658596073939, + "TN": 2043.1666666666667, + "TP": 329.3, + "n_pred": 353.8666666666667, + "n_ref": 358.93333333333334 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9263157894736842, + "FN": 30, + "FP": 33, + "IoU": 0.8627450980392157, + "TN": 1941, + "TP": 396, + "n_pred": 429, + "n_ref": 426 + }, + "3": { + "Dice": 0.9765625, + "FN": 31, + "FP": 11, + "IoU": 0.9541984732824428, + "TN": 1483, + "TP": 875, + "n_pred": 886, + "n_ref": 906 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8063380281690141, + "FN": 87, + "FP": 23, + "IoU": 0.6755162241887905, + "TN": 3661, + "TP": 229, + "n_pred": 252, + "n_ref": 316 + }, + "2": { + "Dice": 0.8372093023255814, + "FN": 111, + "FP": 169, + "IoU": 0.72, + "TN": 3000, + "TP": 720, + "n_pred": 889, + "n_ref": 831 + }, + "3": { + "Dice": 0.9536178107606679, + "FN": 34, + "FP": 41, + "IoU": 0.9113475177304965, + "TN": 3154, + "TP": 771, + "n_pred": 812, + "n_ref": 805 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.21122112211221122, + "FN": 478, + "FP": 0, + "IoU": 0.11808118081180811, + "TN": 2658, + "TP": 64, + "n_pred": 64, + "n_ref": 542 + }, + "2": { + "Dice": 0.8145695364238411, + "FN": 78, + "FP": 34, + "IoU": 0.6871508379888268, + "TN": 2842, + "TP": 246, + "n_pred": 280, + "n_ref": 324 + }, + "3": { + "Dice": 0.9660144181256437, + "FN": 33, + "FP": 0, + "IoU": 0.9342629482071713, + "TN": 2698, + "TP": 469, + "n_pred": 469, + "n_ref": 502 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6567164179104478, + "FN": 138, + "FP": 0, + "IoU": 0.4888888888888889, + "TN": 2930, + "TP": 132, + "n_pred": 132, + "n_ref": 270 + }, + "2": { + "Dice": 0.9173333333333333, + "FN": 38, + "FP": 24, + "IoU": 0.8472906403940886, + "TN": 2794, + "TP": 344, + "n_pred": 368, + "n_ref": 382 + }, + "3": { + "Dice": 0.8673469387755102, + "FN": 20, + "FP": 6, + "IoU": 0.7657657657657657, + "TN": 3089, + "TP": 85, + "n_pred": 91, + "n_ref": 105 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8576214405360134, + "FN": 78, + "FP": 7, + "IoU": 0.750733137829912, + "TN": 1259, + "TP": 256, + "n_pred": 263, + "n_ref": 334 + }, + "2": { + "Dice": 0.9245283018867925, + "FN": 16, + "FP": 0, + "IoU": 0.8596491228070176, + "TN": 1486, + "TP": 98, + "n_pred": 98, + "n_ref": 114 + }, + "3": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 1598, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8975409836065574, + "FN": 101, + "FP": 49, + "IoU": 0.8141263940520446, + "TN": 2393, + "TP": 657, + "n_pred": 706, + "n_ref": 758 + }, + "2": { + "Dice": 0.957983193277311, + "FN": 67, + "FP": 38, + "IoU": 0.9193548387096774, + "TN": 1898, + "TP": 1197, + "n_pred": 1235, + "n_ref": 1264 + }, + "3": { + "Dice": 0.9537512846865365, + "FN": 8, + "FP": 37, + "IoU": 0.9115913555992141, + "TN": 2691, + "TP": 464, + "n_pred": 501, + "n_ref": 472 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 2394, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": 0.974025974025974, + "FN": 14, + "FP": 6, + "IoU": 0.9493670886075949, + "TN": 2005, + "TP": 375, + "n_pred": 381, + "n_ref": 389 + }, + "3": { + "Dice": 0.9759036144578314, + "FN": 6, + "FP": 14, + "IoU": 0.9529411764705882, + "TN": 1975, + "TP": 405, + "n_pred": 419, + "n_ref": 411 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 3200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8018648018648019, + "FN": 166, + "FP": 4, + "IoU": 0.669260700389105, + "TN": 2686, + "TP": 344, + "n_pred": 348, + "n_ref": 510 + }, + "3": { + "Dice": 0.9730483271375465, + "FN": 11, + "FP": 47, + "IoU": 0.9475113122171945, + "TN": 2095, + "TP": 1047, + "n_pred": 1094, + "n_ref": 1058 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8810289389067524, + "FN": 62, + "FP": 12, + "IoU": 0.7873563218390804, + "TN": 2052, + "TP": 274, + "n_pred": 286, + "n_ref": 336 + }, + "3": { + "Dice": 0.8875739644970414, + "FN": 12, + "FP": 7, + "IoU": 0.7978723404255319, + "TN": 2306, + "TP": 75, + "n_pred": 82, + "n_ref": 87 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5166374781085814, + "FN": 517, + "FP": 35, + "IoU": 0.3482880755608028, + "TN": 753, + "TP": 295, + "n_pred": 330, + "n_ref": 812 + }, + "2": { + "Dice": 0.918580375782881, + "FN": 27, + "FP": 51, + "IoU": 0.8494208494208494, + "TN": 1082, + "TP": 440, + "n_pred": 491, + "n_ref": 467 + }, + "3": { + "Dice": 0.8992248062015504, + "FN": 10, + "FP": 3, + "IoU": 0.8169014084507042, + "TN": 1529, + "TP": 58, + "n_pred": 61, + "n_ref": 68 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6412395709177592, + "FN": 75, + "FP": 226, + "IoU": 0.47192982456140353, + "TN": 2630, + "TP": 269, + "n_pred": 495, + "n_ref": 344 + }, + "2": { + "Dice": 0.8521082441787288, + "FN": 136, + "FP": 99, + "IoU": 0.7423245614035088, + "TN": 2288, + "TP": 677, + "n_pred": 776, + "n_ref": 813 + }, + "3": { + "Dice": 0.7628032345013477, + "FN": 40, + "FP": 136, + "IoU": 0.616557734204793, + "TN": 2741, + "TP": 283, + "n_pred": 419, + "n_ref": 323 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8873239436619719, + "FN": 41, + "FP": 7, + "IoU": 0.7974683544303798, + "TN": 2163, + "TP": 189, + "n_pred": 196, + "n_ref": 230 + }, + "3": { + "Dice": 0.9875835721107927, + "FN": 7, + "FP": 6, + "IoU": 0.9754716981132076, + "TN": 1870, + "TP": 517, + "n_pred": 523, + "n_ref": 524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8092202059833251, + "FN": 283, + "FP": 106, + "IoU": 0.6795716639209226, + "TN": 2786, + "TP": 825, + "n_pred": 931, + "n_ref": 1108 + }, + "2": { + "Dice": 0.9238011179758753, + "FN": 179, + "FP": 80, + "IoU": 0.8583925642427556, + "TN": 2171, + "TP": 1570, + "n_pred": 1650, + "n_ref": 1749 + }, + "3": { + "Dice": 0.9076023391812865, + "FN": 59, + "FP": 20, + "IoU": 0.8308351177730193, + "TN": 3533, + "TP": 388, + "n_pred": 408, + "n_ref": 447 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6588921282798834, + "FN": 234, + "FP": 0, + "IoU": 0.49130434782608695, + "TN": 340, + "TP": 226, + "n_pred": 226, + "n_ref": 460 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.951188986232791, + "FN": 12, + "FP": 27, + "IoU": 0.9069212410501193, + "TN": 2781, + "TP": 380, + "n_pred": 407, + "n_ref": 392 + }, + "2": { + "Dice": 0.8218465539661899, + "FN": 95, + "FP": 179, + "IoU": 0.6975717439293598, + "TN": 2294, + "TP": 632, + "n_pred": 811, + "n_ref": 727 + }, + "3": { + "Dice": 0.89002849002849, + "FN": 30, + "FP": 163, + "IoU": 0.8018480492813141, + "TN": 2226, + "TP": 781, + "n_pred": 944, + "n_ref": 811 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9455337690631809, + "FN": 23, + "FP": 2, + "IoU": 0.8966942148760331, + "TN": 1358, + "TP": 217, + "n_pred": 219, + "n_ref": 240 + }, + "3": { + "Dice": 0.9747126436781609, + "FN": 2, + "FP": 9, + "IoU": 0.9506726457399103, + "TN": 1377, + "TP": 212, + "n_pred": 221, + "n_ref": 214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 3190, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + }, + "2": { + "Dice": 0.9517045454545454, + "FN": 17, + "FP": 17, + "IoU": 0.907859078590786, + "TN": 2831, + "TP": 335, + "n_pred": 352, + "n_ref": 352 + }, + "3": { + "Dice": 0.7301587301587301, + "FN": 17, + "FP": 0, + "IoU": 0.575, + "TN": 3160, + "TP": 23, + "n_pred": 23, + "n_ref": 40 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8986784140969163, + "FN": 22, + "FP": 1, + "IoU": 0.816, + "TN": 2275, + "TP": 102, + "n_pred": 103, + "n_ref": 124 + }, + "2": { + "Dice": 0.8763440860215054, + "FN": 8, + "FP": 38, + "IoU": 0.7799043062200957, + "TN": 2191, + "TP": 163, + "n_pred": 201, + "n_ref": 171 + }, + "3": { + "Dice": 0.977022977022977, + "FN": 16, + "FP": 7, + "IoU": 0.955078125, + "TN": 1888, + "TP": 489, + "n_pred": 496, + "n_ref": 505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 2, + "FP": 0, + "IoU": 0.0, + "TN": 2398, + "TP": 0, + "n_pred": 0, + "n_ref": 2 + }, + "2": { + "Dice": 0.9292929292929293, + "FN": 33, + "FP": 30, + "IoU": 0.8679245283018868, + "TN": 1923, + "TP": 414, + "n_pred": 444, + "n_ref": 447 + }, + "3": { + "Dice": 0.8235294117647058, + "FN": 30, + "FP": 6, + "IoU": 0.7, + "TN": 2280, + "TP": 84, + "n_pred": 90, + "n_ref": 114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.941320293398533, + "FN": 83, + "FP": 13, + "IoU": 0.8891454965357968, + "TN": 1534, + "TP": 770, + "n_pred": 783, + "n_ref": 853 + }, + "3": { + "Dice": 0.9432314410480349, + "FN": 10, + "FP": 68, + "IoU": 0.8925619834710744, + "TN": 1674, + "TP": 648, + "n_pred": 716, + "n_ref": 658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 156, + "IoU": 0.0, + "TN": 2244, + "TP": 0, + "n_pred": 156, + "n_ref": 0 + }, + "2": { + "Dice": 0.8100558659217877, + "FN": 7, + "FP": 61, + "IoU": 0.6807511737089202, + "TN": 2187, + "TP": 145, + "n_pred": 206, + "n_ref": 152 + }, + "3": { + "Dice": 0.9366197183098591, + "FN": 34, + "FP": 2, + "IoU": 0.8807947019867549, + "TN": 2098, + "TP": 266, + "n_pred": 268, + "n_ref": 300 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9137931034482759, + "FN": 28, + "FP": 12, + "IoU": 0.8412698412698413, + "TN": 2148, + "TP": 212, + "n_pred": 224, + "n_ref": 240 + }, + "3": { + "Dice": 0.954248366013072, + "FN": 0, + "FP": 28, + "IoU": 0.9125, + "TN": 2080, + "TP": 292, + "n_pred": 320, + "n_ref": 292 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.897119341563786, + "FN": 4, + "FP": 71, + "IoU": 0.8134328358208955, + "TN": 398, + "TP": 327, + "n_pred": 398, + "n_ref": 331 + }, + "3": { + "Dice": 0.9429429429429429, + "FN": 15, + "FP": 4, + "IoU": 0.8920454545454546, + "TN": 624, + "TP": 157, + "n_pred": 161, + "n_ref": 172 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient075_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient075_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 1600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3586869495596477, + "FN": 279, + "FP": 522, + "IoU": 0.21853658536585366, + "TN": 2175, + "TP": 224, + "n_pred": 746, + "n_ref": 503 + }, + "2": { + "Dice": 0.11155378486055777, + "FN": 223, + "FP": 0, + "IoU": 0.05907172995780591, + "TN": 2963, + "TP": 14, + "n_pred": 14, + "n_ref": 237 + }, + "3": { + "Dice": 0.35958395245170877, + "FN": 431, + "FP": 0, + "IoU": 0.21920289855072464, + "TN": 2648, + "TP": 121, + "n_pred": 121, + "n_ref": 552 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9066666666666666, + "FN": 53, + "FP": 17, + "IoU": 0.8292682926829268, + "TN": 1990, + "TP": 340, + "n_pred": 357, + "n_ref": 393 + }, + "2": { + "Dice": 0.8928571428571429, + "FN": 0, + "FP": 6, + "IoU": 0.8064516129032258, + "TN": 2369, + "TP": 25, + "n_pred": 31, + "n_ref": 25 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 2400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 1600, + "TP": 800, + "n_pred": 800, + "n_ref": 800 + }, + "2": { + "Dice": 0.8624078624078624, + "FN": 99, + "FP": 13, + "IoU": 0.7580993520518359, + "TN": 1937, + "TP": 351, + "n_pred": 364, + "n_ref": 450 + }, + "3": { + "Dice": 0.9372822299651568, + "FN": 13, + "FP": 23, + "IoU": 0.8819672131147541, + "TN": 2095, + "TP": 269, + "n_pred": 292, + "n_ref": 282 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9, + "FN": 0, + "FP": 2, + "IoU": 0.8181818181818182, + "TN": 789, + "TP": 9, + "n_pred": 11, + "n_ref": 9 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9834254143646409, + "FN": 3, + "FP": 6, + "IoU": 0.967391304347826, + "TN": 2924, + "TP": 267, + "n_pred": 273, + "n_ref": 270 + }, + "2": { + "Dice": 0.9173553719008265, + "FN": 184, + "FP": 56, + "IoU": 0.8473282442748091, + "TN": 1628, + "TP": 1332, + "n_pred": 1388, + "n_ref": 1516 + }, + "3": { + "Dice": 0.9485961123110151, + "FN": 20, + "FP": 99, + "IoU": 0.9022185702547247, + "TN": 1983, + "TP": 1098, + "n_pred": 1197, + "n_ref": 1118 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2859152/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset379_ACDC__patch-2_20_20__sb-random-label2-all-classes__sbs-90__qs-90__unc-random-label__seed-12347/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8279338207617319, + "FN": 42.64980842911878, + "FP": 40.49080459770115, + "IoU": 0.7514194145170917, + "TN": 2026.5675095785439, + "TP": 356.3148659003831, + "n_pred": 396.80567049808434, + "n_ref": 398.9646743295019 + }, + "mean": { + "1": { + "Dice": 0.7309074106346143, + "FN": 49.09149425287357, + "FP": 40.88436781609196, + "IoU": 0.6498314400268437, + "TN": 2129.648275862069, + "TP": 246.39885057471264, + "n_pred": 287.2832183908046, + "n_ref": 295.4903448275862 + }, + "2": { + "Dice": 0.8602631557722924, + "FN": 50.9864367816092, + "FP": 52.67471264367816, + "IoU": 0.7701455207179648, + "TN": 1981.076091954023, + "TP": 381.2857471264368, + "n_pred": 433.9604597701149, + "n_ref": 432.2721839080459 + }, + "3": { + "Dice": 0.8926308958782891, + "FN": 27.87149425287356, + "FP": 27.913333333333334, + "IoU": 0.8342812828064666, + "TN": 1968.9781609195402, + "TP": 441.26000000000005, + "n_pred": 469.1733333333333, + "n_ref": 469.13149425287355 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_000/summary.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_000/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..22c2d01f5f16172db9ed8ac28f22bce6830aa6f2 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_000/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8218934900942019, + "FN": 1759.073333333333, + "FP": 1199.5600000000002, + "IoU": 0.7190627375282994, + "TN": 843034.9666666667, + "TP": 8435.039999999999, + "n_pred": 9634.6, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.7567947498066298, + "FN": 2571.08, + "FP": 1264.88, + "IoU": 0.6327016681449984, + "TN": 843309.7, + "TP": 7282.98, + "n_pred": 8547.86, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8011973444618028, + "FN": 1934.7, + "FP": 1583.98, + "IoU": 0.6835954721899706, + "TN": 842789.16, + "TP": 8120.8, + "n_pred": 9704.78, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9076883760141727, + "FN": 771.44, + "FP": 749.82, + "IoU": 0.8408910722499292, + "TN": 843006.04, + "TP": 9901.34, + "n_pred": 10651.16, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8631151795404143, + "FN": 2300, + "FP": 601, + "IoU": 0.7591931601228522, + "TN": 1093873, + "TP": 9146, + "n_pred": 9747, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8588086011180082, + "FN": 935, + "FP": 3182, + "IoU": 0.7525543935569179, + "TN": 1089282, + "TP": 12521, + "n_pred": 15703, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9495482235577906, + "FN": 983, + "FP": 1485, + "IoU": 0.9039427081306193, + "TN": 1080227, + "TP": 23225, + "n_pred": 24710, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8706739526411658, + "FN": 98, + "FP": 1322, + "IoU": 0.7709677419354839, + "TN": 1099720, + "TP": 4780, + "n_pred": 6102, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8724337380029238, + "FN": 2254, + "FP": 1760, + "IoU": 0.7737316798196167, + "TN": 1088180, + "TP": 13726, + "n_pred": 15486, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9519917716064826, + "FN": 1359, + "FP": 368, + "IoU": 0.9083819628647215, + "TN": 1087070, + "TP": 17123, + "n_pred": 17491, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6244507985215147, + "FN": 4393, + "FP": 992, + "IoU": 0.45396471303995134, + "TN": 899578, + "TP": 4477, + "n_pred": 5469, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8721152047877314, + "FN": 2128, + "FP": 1291, + "IoU": 0.77323074882271, + "TN": 894363, + "TP": 11658, + "n_pred": 12949, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9649959463970623, + "FN": 1177, + "FP": 291, + "IoU": 0.9323595816246601, + "TN": 887737, + "TP": 20235, + "n_pred": 20526, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.48322030951138933, + "FN": 4199, + "FP": 1745, + "IoU": 0.31858305628797434, + "TN": 900717, + "TP": 2779, + "n_pred": 4524, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8579693783955408, + "FN": 2164, + "FP": 1862, + "IoU": 0.7512665266279501, + "TN": 893254, + "TP": 12160, + "n_pred": 14022, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9616359828023371, + "FN": 1188, + "FP": 204, + "IoU": 0.9261068053933539, + "TN": 890602, + "TP": 17446, + "n_pred": 17650, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.822819370599224, + "FN": 7000, + "FP": 398, + "IoU": 0.698974609375, + "TN": 1401184, + "TP": 17178, + "n_pred": 17576, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8202560170260712, + "FN": 1980, + "FP": 3763, + "IoU": 0.695283068923436, + "TN": 1406913, + "TP": 13104, + "n_pred": 16867, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9656274980015987, + "FN": 1116, + "FP": 604, + "IoU": 0.9335394126738794, + "TN": 1399880, + "TP": 24160, + "n_pred": 24764, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.889741014638303, + "FN": 2932, + "FP": 691, + "IoU": 0.801381503207061, + "TN": 1407519, + "TP": 14618, + "n_pred": 15309, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8175264139216905, + "FN": 1914, + "FP": 3958, + "IoU": 0.6913697046147377, + "TN": 1406734, + "TP": 13154, + "n_pred": 17112, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9493713591687096, + "FN": 1595, + "FP": 656, + "IoU": 0.9036221955814352, + "TN": 1402404, + "TP": 21105, + "n_pred": 21761, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8149525757857541, + "FN": 2685, + "FP": 300, + "IoU": 0.6876961707470182, + "TN": 752490, + "TP": 6573, + "n_pred": 6873, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8634954569748797, + "FN": 1332, + "FP": 1222, + "IoU": 0.7597817908201655, + "TN": 751416, + "TP": 8078, + "n_pred": 9300, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9675275351310293, + "FN": 731, + "FP": 295, + "IoU": 0.9370976641530255, + "TN": 745737, + "TP": 15285, + "n_pred": 15580, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8140456053955679, + "FN": 1116, + "FP": 621, + "IoU": 0.6864054883552988, + "TN": 756509, + "TP": 3802, + "n_pred": 4423, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8024726854514088, + "FN": 2865, + "FP": 1257, + "IoU": 0.6701080432172869, + "TN": 749553, + "TP": 8373, + "n_pred": 9630, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9443120642485218, + "FN": 1212, + "FP": 50, + "IoU": 0.8944992476174553, + "TN": 750086, + "TP": 10700, + "n_pred": 10750, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.39026942191995817, + "FN": 10114, + "FP": 1541, + "IoU": 0.24244393890152746, + "TN": 1062887, + "TP": 3730, + "n_pred": 5271, + "n_ref": 13844 + }, + "2": { + "Dice": 0.7062047702650623, + "FN": 1624, + "FP": 5237, + "IoU": 0.5458396769709406, + "TN": 1063165, + "TP": 8246, + "n_pred": 13483, + "n_ref": 9870 + }, + "3": { + "Dice": 0.8237822802414894, + "FN": 5373, + "FP": 202, + "IoU": 0.700365473503171, + "TN": 1059666, + "TP": 13031, + "n_pred": 13233, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.44059273524848874, + "FN": 9178, + "FP": 1279, + "IoU": 0.28253859348198973, + "TN": 1063697, + "TP": 4118, + "n_pred": 5397, + "n_ref": 13296 + }, + "2": { + "Dice": 0.7141557044758832, + "FN": 2168, + "FP": 4742, + "IoU": 0.5553982756402007, + "TN": 1062730, + "TP": 8632, + "n_pred": 13374, + "n_ref": 10800 + }, + "3": { + "Dice": 0.8048586069462896, + "FN": 4624, + "FP": 517, + "IoU": 0.6734421647716445, + "TN": 1062529, + "TP": 10602, + "n_pred": 11119, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8580364260746919, + "FN": 2136, + "FP": 179, + "IoU": 0.7513693480829127, + "TN": 1096609, + "TP": 6996, + "n_pred": 7175, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8268769283510456, + "FN": 1834, + "FP": 2206, + "IoU": 0.7048509643483343, + "TN": 1092232, + "TP": 9648, + "n_pred": 11854, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9193949169536597, + "FN": 951, + "FP": 898, + "IoU": 0.8508149104405357, + "TN": 1093526, + "TP": 10545, + "n_pred": 11443, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.775812892184826, + "FN": 1012, + "FP": 167, + "IoU": 0.6337371854613234, + "TN": 1102701, + "TP": 2040, + "n_pred": 2207, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8269073680771116, + "FN": 2229, + "FP": 2009, + "IoU": 0.7048952022839635, + "TN": 1091559, + "TP": 10123, + "n_pred": 12132, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7940283400809717, + "FN": 142, + "FP": 1486, + "IoU": 0.6584137641628199, + "TN": 1101154, + "TP": 3138, + "n_pred": 4624, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.863922962283618, + "FN": 1628, + "FP": 746, + "IoU": 0.7604439959636731, + "TN": 1136970, + "TP": 7536, + "n_pred": 8282, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8845418834271154, + "FN": 2753, + "FP": 1597, + "IoU": 0.7929852948174939, + "TN": 1125867, + "TP": 16663, + "n_pred": 18260, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9435857805255023, + "FN": 941, + "FP": 373, + "IoU": 0.8931967812728603, + "TN": 1134577, + "TP": 10989, + "n_pred": 11362, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4004380361379814, + "FN": 1369, + "FP": 1916, + "IoU": 0.2503423094477408, + "TN": 1142498, + "TP": 1097, + "n_pred": 3013, + "n_ref": 2466 + }, + "2": { + "Dice": 0.6896185216848818, + "FN": 9513, + "FP": 3920, + "IoU": 0.5262730991677247, + "TN": 1118524, + "TP": 14923, + "n_pred": 18843, + "n_ref": 24436 + }, + "3": { + "Dice": 0.43956815588519266, + "FN": 212, + "FP": 6173, + "IoU": 0.28169647879401505, + "TN": 1137991, + "TP": 2504, + "n_pred": 8677, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9021655241294775, + "FN": 1910, + "FP": 245, + "IoU": 0.8217682573815235, + "TN": 788709, + "TP": 9936, + "n_pred": 10181, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8580459770114942, + "FN": 1169, + "FP": 1301, + "IoU": 0.7513839959738299, + "TN": 790865, + "TP": 7465, + "n_pred": 8766, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9456071964017991, + "FN": 769, + "FP": 138, + "IoU": 0.8968262996246161, + "TN": 792009, + "TP": 7884, + "n_pred": 8022, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6504529342260733, + "FN": 636, + "FP": 2914, + "IoU": 0.4819786954618415, + "TN": 793947, + "TP": 3303, + "n_pred": 6217, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8464065168834581, + "FN": 2989, + "FP": 518, + "IoU": 0.7337129840546697, + "TN": 787630, + "TP": 9663, + "n_pred": 10181, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8614657210401891, + "FN": 113, + "FP": 766, + "IoU": 0.7566445182724253, + "TN": 797188, + "TP": 2733, + "n_pred": 3499, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9252671541057368, + "FN": 1031, + "FP": 1095, + "IoU": 0.860927585530189, + "TN": 1332553, + "TP": 13161, + "n_pred": 14256, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8738764310720031, + "FN": 1370, + "FP": 1296, + "IoU": 0.776004032935641, + "TN": 1335938, + "TP": 9236, + "n_pred": 10532, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9658294392523364, + "FN": 793, + "FP": 377, + "IoU": 0.9339169726066083, + "TN": 1330135, + "TP": 16535, + "n_pred": 16912, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7498791853641699, + "FN": 437, + "FP": 3186, + "IoU": 0.5998453722111774, + "TN": 1338786, + "TP": 5431, + "n_pred": 8617, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8373120748667735, + "FN": 2451, + "FP": 1304, + "IoU": 0.7201520345804143, + "TN": 1334422, + "TP": 9663, + "n_pred": 10967, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9320362707984858, + "FN": 1031, + "FP": 513, + "IoU": 0.8727227763580908, + "TN": 1335709, + "TP": 10587, + "n_pred": 11100, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8293776265759456, + "FN": 2101, + "FP": 2162, + "IoU": 0.7084928884026258, + "TN": 837344, + "TP": 10361, + "n_pred": 12523, + "n_ref": 12462 + }, + "2": { + "Dice": 0.835533608787665, + "FN": 1157, + "FP": 2107, + "IoU": 0.7175248810038944, + "TN": 840413, + "TP": 8291, + "n_pred": 10398, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9633418584825234, + "FN": 973, + "FP": 360, + "IoU": 0.9292763157894737, + "TN": 833120, + "TP": 17515, + "n_pred": 17875, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8575408754307501, + "FN": 1090, + "FP": 853, + "IoU": 0.7506096778333975, + "TN": 844177, + "TP": 5848, + "n_pred": 6701, + "n_ref": 6938 + }, + "2": { + "Dice": 0.853692109586608, + "FN": 1679, + "FP": 1616, + "IoU": 0.7447319491788038, + "TN": 839060, + "TP": 9613, + "n_pred": 11229, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9518808106741354, + "FN": 761, + "FP": 476, + "IoU": 0.9081799287410927, + "TN": 838496, + "TP": 12235, + "n_pred": 12711, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6101172115977791, + "FN": 2889, + "FP": 903, + "IoU": 0.43897026187305815, + "TN": 845209, + "TP": 2967, + "n_pred": 3870, + "n_ref": 5856 + }, + "2": { + "Dice": 0.7938082217175696, + "FN": 2156, + "FP": 2293, + "IoU": 0.6581111196495811, + "TN": 838955, + "TP": 8564, + "n_pred": 10857, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9107784931850489, + "FN": 2064, + "FP": 70, + "IoU": 0.8361738062336864, + "TN": 838942, + "TP": 10892, + "n_pred": 10962, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.488807674737323, + "FN": 1034, + "FP": 1204, + "IoU": 0.3234582829504232, + "TN": 848660, + "TP": 1070, + "n_pred": 2274, + "n_ref": 2104 + }, + "2": { + "Dice": 0.811431487624394, + "FN": 3046, + "FP": 1388, + "IoU": 0.6826964362387291, + "TN": 837994, + "TP": 9540, + "n_pred": 10928, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9387826086956522, + "FN": 649, + "FP": 407, + "IoU": 0.8846279908226811, + "TN": 842815, + "TP": 8097, + "n_pred": 8504, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5391571712787122, + "FN": 7126, + "FP": 3066, + "IoU": 0.36907267549832856, + "TN": 780886, + "TP": 5962, + "n_pred": 9028, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7885881492318947, + "FN": 1847, + "FP": 1910, + "IoU": 0.6509661835748792, + "TN": 786276, + "TP": 7007, + "n_pred": 8917, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9419953596287703, + "FN": 1278, + "FP": 222, + "IoU": 0.8903508771929824, + "TN": 783360, + "TP": 12180, + "n_pred": 12402, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5988561589078163, + "FN": 2799, + "FP": 3724, + "IoU": 0.4274051966292135, + "TN": 785648, + "TP": 4869, + "n_pred": 8593, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8265138247625112, + "FN": 1835, + "FP": 1434, + "IoU": 0.7043234442836469, + "TN": 785984, + "TP": 7787, + "n_pred": 9221, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9445069788383611, + "FN": 641, + "FP": 345, + "IoU": 0.8948490988589101, + "TN": 787663, + "TP": 8391, + "n_pred": 8736, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8910645681001363, + "FN": 1683, + "FP": 954, + "IoU": 0.8035315154224407, + "TN": 883248, + "TP": 10785, + "n_pred": 11739, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8473336815613277, + "FN": 1416, + "FP": 1799, + "IoU": 0.7351075224520063, + "TN": 884533, + "TP": 8922, + "n_pred": 10721, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9490083859941973, + "FN": 313, + "FP": 970, + "IoU": 0.90296475571018, + "TN": 883448, + "TP": 11939, + "n_pred": 12909, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7793060331353548, + "FN": 1370, + "FP": 1454, + "IoU": 0.6384122919334186, + "TN": 888860, + "TP": 4986, + "n_pred": 6440, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8518680167597765, + "FN": 1759, + "FP": 1635, + "IoU": 0.7419600091233939, + "TN": 883517, + "TP": 9759, + "n_pred": 11394, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9401300794930235, + "FN": 370, + "FP": 707, + "IoU": 0.8870240218189447, + "TN": 887137, + "TP": 8456, + "n_pred": 9163, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9470343717874223, + "FN": 626, + "FP": 559, + "IoU": 0.8993972323626793, + "TN": 750269, + "TP": 10594, + "n_pred": 11153, + "n_ref": 11220 + }, + "2": { + "Dice": 0.899488926746167, + "FN": 1436, + "FP": 570, + "IoU": 0.8173374613003096, + "TN": 751066, + "TP": 8976, + "n_pred": 9546, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9679379007762403, + "FN": 280, + "FP": 480, + "IoU": 0.9378678875081753, + "TN": 749816, + "TP": 11472, + "n_pred": 11952, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7858590407565863, + "FN": 302, + "FP": 1600, + "IoU": 0.6472551928783383, + "TN": 756656, + "TP": 3490, + "n_pred": 5090, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8184037558685446, + "FN": 2916, + "FP": 952, + "IoU": 0.6926255562619199, + "TN": 749464, + "TP": 8716, + "n_pred": 9668, + "n_ref": 11632 + }, + "3": { + "Dice": 0.937350964665077, + "FN": 348, + "FP": 519, + "IoU": 0.8820889432884537, + "TN": 754695, + "TP": 6486, + "n_pred": 7005, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8335652360055656, + "FN": 154, + "FP": 2956, + "IoU": 0.7146265369792623, + "TN": 984430, + "TP": 7788, + "n_pred": 10744, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8186154870201908, + "FN": 1369, + "FP": 1901, + "IoU": 0.6929289135130059, + "TN": 984679, + "TP": 7379, + "n_pred": 9280, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9642731432594157, + "FN": 109, + "FP": 1109, + "IoU": 0.9310110450297366, + "TN": 977673, + "TP": 16437, + "n_pred": 17546, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7308659719726913, + "FN": 191, + "FP": 2056, + "IoU": 0.5758776896942243, + "TN": 990030, + "TP": 3051, + "n_pred": 5107, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8125913434513772, + "FN": 1106, + "FP": 2228, + "IoU": 0.6843400871047151, + "TN": 984766, + "TP": 7228, + "n_pred": 9456, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9310836078710711, + "FN": 157, + "FP": 1391, + "IoU": 0.8710537276134944, + "TN": 983323, + "TP": 10457, + "n_pred": 11848, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9472244222046223, + "FN": 1168, + "FP": 298, + "IoU": 0.8997401176309671, + "TN": 743394, + "TP": 13156, + "n_pred": 13454, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9000343524562007, + "FN": 952, + "FP": 794, + "IoU": 0.8182386008744534, + "TN": 748410, + "TP": 7860, + "n_pred": 8654, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9709248783054861, + "FN": 232, + "FP": 431, + "IoU": 0.9434927128611609, + "TN": 746283, + "TP": 11070, + "n_pred": 11501, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7581099573371971, + "FN": 527, + "FP": 2478, + "IoU": 0.6104485351309308, + "TN": 750302, + "TP": 4709, + "n_pred": 7187, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8879012345679013, + "FN": 1241, + "FP": 802, + "IoU": 0.7984014209591475, + "TN": 747882, + "TP": 8091, + "n_pred": 8893, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8791597567716971, + "FN": 216, + "FP": 877, + "IoU": 0.7843756164924048, + "TN": 752947, + "TP": 3976, + "n_pred": 4853, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8556664543073547, + "FN": 1902, + "FP": 137, + "IoU": 0.7477421749350489, + "TN": 630893, + "TP": 6044, + "n_pred": 6181, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8717809212912586, + "FN": 559, + "FP": 855, + "IoU": 0.7727053528371645, + "TN": 632755, + "TP": 4807, + "n_pred": 5662, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9583919032892887, + "FN": 516, + "FP": 76, + "IoU": 0.9201079622132253, + "TN": 631566, + "TP": 6818, + "n_pred": 6894, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6685939553219448, + "FN": 476, + "FP": 2046, + "IoU": 0.5021713383339913, + "TN": 633910, + "TP": 2544, + "n_pred": 4590, + "n_ref": 3020 + }, + "2": { + "Dice": 0.8932245477119546, + "FN": 1057, + "FP": 448, + "IoU": 0.8070512820512821, + "TN": 631176, + "TP": 6295, + "n_pred": 6743, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9097875304771856, + "FN": 144, + "FP": 374, + "IoU": 0.8345047923322684, + "TN": 635846, + "TP": 2612, + "n_pred": 2986, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9119551293148219, + "FN": 2270, + "FP": 273, + "IoU": 0.838159485776109, + "TN": 967327, + "TP": 13170, + "n_pred": 13443, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8433469959012296, + "FN": 1460, + "FP": 1674, + "IoU": 0.7291270527225583, + "TN": 971470, + "TP": 8436, + "n_pred": 10110, + "n_ref": 9896 + }, + "3": { + "Dice": 0.96419644169975, + "FN": 103, + "FP": 871, + "IoU": 0.9308680530910639, + "TN": 968951, + "TP": 13115, + "n_pred": 13986, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.888691724471689, + "FN": 679, + "FP": 701, + "IoU": 0.7996806503120918, + "TN": 976151, + "TP": 5509, + "n_pred": 6210, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8736577808643624, + "FN": 1779, + "FP": 586, + "IoU": 0.7756592676911402, + "TN": 972498, + "TP": 8177, + "n_pred": 8763, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9175449473031618, + "FN": 70, + "FP": 994, + "IoU": 0.847651775486827, + "TN": 976056, + "TP": 5920, + "n_pred": 6914, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8444382782421699, + "FN": 4007, + "FP": 478, + "IoU": 0.7307599951975027, + "TN": 1031918, + "TP": 12173, + "n_pred": 12651, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8717778147347414, + "FN": 845, + "FP": 1468, + "IoU": 0.7727004716981132, + "TN": 1038400, + "TP": 7863, + "n_pred": 9331, + "n_ref": 8708 + }, + "3": { + "Dice": 0.963321631763709, + "FN": 323, + "FP": 586, + "IoU": 0.9292386735170481, + "TN": 1035730, + "TP": 11937, + "n_pred": 12523, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8512793642476639, + "FN": 556, + "FP": 1147, + "IoU": 0.7410673559373575, + "TN": 1041999, + "TP": 4874, + "n_pred": 6021, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8418832004116285, + "FN": 2141, + "FP": 932, + "IoU": 0.726941531899769, + "TN": 1037322, + "TP": 8181, + "n_pred": 9113, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9185324553151458, + "FN": 198, + "FP": 668, + "IoU": 0.8493389004871259, + "TN": 1042828, + "TP": 4882, + "n_pred": 5550, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7523578828016286, + "FN": 3863, + "FP": 942, + "IoU": 0.6030237937871777, + "TN": 477112, + "TP": 7299, + "n_pred": 8241, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7603591160220995, + "FN": 515, + "FP": 873, + "IoU": 0.6133704735376044, + "TN": 485626, + "TP": 2202, + "n_pred": 3075, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9516852760096003, + "FN": 91, + "FP": 372, + "IoU": 0.9078240095560423, + "TN": 484193, + "TP": 4560, + "n_pred": 4932, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7846565847511027, + "FN": 1670, + "FP": 1064, + "IoU": 0.6456254050550875, + "TN": 481501, + "TP": 4981, + "n_pred": 6045, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8342429440199595, + "FN": 685, + "FP": 378, + "IoU": 0.7156233279828785, + "TN": 485478, + "TP": 2675, + "n_pred": 3053, + "n_ref": 3360 + }, + "3": { + "Dice": 0.866914498141264, + "FN": 41, + "FP": 496, + "IoU": 0.7650918635170604, + "TN": 486930, + "TP": 1749, + "n_pred": 2245, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8905491221516623, + "FN": 2764, + "FP": 459, + "IoU": 0.8026936026936027, + "TN": 464145, + "TP": 13112, + "n_pred": 13571, + "n_ref": 15876 + }, + "2": { + "Dice": 0.7898971837282074, + "FN": 985, + "FP": 895, + "IoU": 0.652752124122645, + "TN": 475066, + "TP": 3534, + "n_pred": 4429, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9423381865359666, + "FN": 423, + "FP": 377, + "IoU": 0.8909636091045386, + "TN": 473143, + "TP": 6537, + "n_pred": 6914, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8859657248726263, + "FN": 2047, + "FP": 415, + "IoU": 0.7952769000498919, + "TN": 468454, + "TP": 9564, + "n_pred": 9979, + "n_ref": 11611 + }, + "2": { + "Dice": 0.7909717367422351, + "FN": 1702, + "FP": 391, + "IoU": 0.6542210474145052, + "TN": 474427, + "TP": 3960, + "n_pred": 4351, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8476235591346913, + "FN": 122, + "FP": 843, + "IoU": 0.7355439846533297, + "TN": 476831, + "TP": 2684, + "n_pred": 3527, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7228425779827649, + "FN": 8761, + "FP": 373, + "IoU": 0.5659776669042528, + "TN": 623595, + "TP": 11911, + "n_pred": 12284, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7468559610977586, + "FN": 2385, + "FP": 2144, + "IoU": 0.595985727029438, + "TN": 633430, + "TP": 6681, + "n_pred": 8825, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9249054152176406, + "FN": 1897, + "FP": 68, + "IoU": 0.8603014360870184, + "TN": 630574, + "TP": 12101, + "n_pred": 12169, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7334315169366715, + "FN": 6119, + "FP": 578, + "IoU": 0.5790697674418605, + "TN": 628730, + "TP": 9213, + "n_pred": 9791, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8269813282698133, + "FN": 3020, + "FP": 807, + "IoU": 0.705002697911046, + "TN": 631667, + "TP": 9146, + "n_pred": 9953, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9202046375656102, + "FN": 637, + "FP": 564, + "IoU": 0.8522028058085159, + "TN": 636514, + "TP": 6925, + "n_pred": 7489, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8502531950807812, + "FN": 4422, + "FP": 1788, + "IoU": 0.739513422818792, + "TN": 540640, + "TP": 17630, + "n_pred": 19418, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7394374348882973, + "FN": 1275, + "FP": 976, + "IoU": 0.586593204775023, + "TN": 559035, + "TP": 3194, + "n_pred": 4170, + "n_ref": 4469 + }, + "3": { + "Dice": 0.950314465408805, + "FN": 342, + "FP": 448, + "IoU": 0.9053325344517675, + "TN": 556135, + "TP": 7555, + "n_pred": 8003, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6742353161944079, + "FN": 1246, + "FP": 5698, + "IoU": 0.5085633404104741, + "TN": 550350, + "TP": 7186, + "n_pred": 12884, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8282807308970099, + "FN": 874, + "FP": 780, + "IoU": 0.7068934963671806, + "TN": 558837, + "TP": 3989, + "n_pred": 4769, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8749162086070519, + "FN": 189, + "FP": 744, + "IoU": 0.7776453765490944, + "TN": 560284, + "TP": 3263, + "n_pred": 4007, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3137757828363792, + "FN": 6107, + "FP": 314, + "IoU": 0.18608188617061733, + "TN": 410991, + "TP": 1468, + "n_pred": 1782, + "n_ref": 7575 + }, + "2": { + "Dice": 0.056981664315937944, + "FN": 2755, + "FP": 588, + "IoU": 0.02932636469221835, + "TN": 415436, + "TP": 101, + "n_pred": 689, + "n_ref": 2856 + }, + "3": { + "Dice": 0.7471162377994676, + "FN": 410, + "FP": 2155, + "IoU": 0.5963172804532578, + "TN": 412526, + "TP": 3789, + "n_pred": 5944, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6180088187514504, + "FN": 2074, + "FP": 1218, + "IoU": 0.4471872376154492, + "TN": 412925, + "TP": 2663, + "n_pred": 3881, + "n_ref": 4737 + }, + "2": { + "Dice": 0.3234657039711191, + "FN": 2321, + "FP": 490, + "IoU": 0.1929371231696813, + "TN": 415397, + "TP": 672, + "n_pred": 1162, + "n_ref": 2993 + }, + "3": { + "Dice": 0.715411705517357, + "FN": 250, + "FP": 1447, + "IoU": 0.5569190600522194, + "TN": 415050, + "TP": 2133, + "n_pred": 3580, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9435927745557977, + "FN": 794, + "FP": 733, + "IoU": 0.8932093153367369, + "TN": 482211, + "TP": 12772, + "n_pred": 13505, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8299699441820524, + "FN": 1873, + "FP": 503, + "IoU": 0.7093577981651377, + "TN": 488335, + "TP": 5799, + "n_pred": 6302, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9331717661314753, + "FN": 71, + "FP": 1032, + "IoU": 0.8747160381644707, + "TN": 487706, + "TP": 7701, + "n_pred": 8733, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9127008893743174, + "FN": 1563, + "FP": 675, + "IoU": 0.8394202482600273, + "TN": 482573, + "TP": 11699, + "n_pred": 12374, + "n_ref": 13262 + }, + "2": { + "Dice": 0.7619243421052632, + "FN": 2917, + "FP": 557, + "IoU": 0.6154101627366323, + "TN": 487477, + "TP": 5559, + "n_pred": 6116, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8017200191113235, + "FN": 44, + "FP": 1616, + "IoU": 0.6690590111642744, + "TN": 491494, + "TP": 3356, + "n_pred": 4972, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_000/summary_cross_val.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_000/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..491788d22fc17a9ea51b8e257546938856a7e7b5 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_000/summary_cross_val.json @@ -0,0 +1,3372 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.5280158044373978, + "FN": 19.15686274509804, + "FP": 73.70588235294117, + "IoU": 0.48029675800578975, + "TN": 5966.078431372549, + "TP": 341.05882352941177, + "n_pred": 414.7647058823529, + "n_ref": 360.21568627450984 + }, + "mean": { + "1": { + "Dice": 0.42004895213502186, + "FN": 9.764705882352942, + "FP": 160.8235294117647, + "IoU": 0.34498332881040983, + "TN": 6011.64705882353, + "TP": 217.76470588235293, + "n_pred": 378.5882352941176, + "n_ref": 227.52941176470588 + }, + "2": { + "Dice": 0.3980133293884242, + "FN": 30.764705882352942, + "FP": 40.23529411764706, + "IoU": 0.3605822415575282, + "TN": 6065.470588235294, + "TP": 263.52941176470586, + "n_pred": 303.7647058823529, + "n_ref": 294.29411764705884 + }, + "3": { + "Dice": 0.7659851317887474, + "FN": 16.941176470588236, + "FP": 20.058823529411764, + "IoU": 0.7353247036494313, + "TN": 5821.117647058823, + "TP": 541.8823529411765, + "n_pred": 561.9411764705883, + "n_ref": 558.8235294117648 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 6394, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 87, + "IoU": 0.0, + "TN": 6313, + "TP": 0, + "n_pred": 87, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.714711137581894, + "FN": 34, + "FP": 445, + "IoU": 0.5560704355885079, + "TN": 5321, + "TP": 600, + "n_pred": 1045, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 6394, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 6393, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7609427609427609, + "FN": 46, + "FP": 167, + "IoU": 0.6141304347826086, + "TN": 5848, + "TP": 339, + "n_pred": 506, + "n_ref": 385 + }, + "2": { + "Dice": 0.8834207341670028, + "FN": 116, + "FP": 173, + "IoU": 0.7911849710982659, + "TN": 5016, + "TP": 1095, + "n_pred": 1268, + "n_ref": 1211 + }, + "3": { + "Dice": 0.9613284804367607, + "FN": 119, + "FP": 51, + "IoU": 0.9255365746824354, + "TN": 4117, + "TP": 2113, + "n_pred": 2164, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 192, + "IoU": 0.0, + "TN": 6208, + "TP": 0, + "n_pred": 192, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6666666666666666, + "FN": 2, + "FP": 20, + "IoU": 0.5, + "TN": 6356, + "TP": 22, + "n_pred": 42, + "n_ref": 24 + }, + "2": { + "Dice": 0.9238152369526095, + "FN": 148, + "FP": 106, + "IoU": 0.8584169453734671, + "TN": 4606, + "TP": 1540, + "n_pred": 1646, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9786657636302065, + "FN": 73, + "FP": 116, + "IoU": 0.9582228116710876, + "TN": 1876, + "TP": 4335, + "n_pred": 4451, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 168, + "IoU": 0.0, + "TN": 6232, + "TP": 0, + "n_pred": 168, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.752, + "FN": 17, + "FP": 14, + "IoU": 0.6025641025641025, + "TN": 6322, + "TP": 47, + "n_pred": 61, + "n_ref": 64 + }, + "2": { + "Dice": 0.8769448373408769, + "FN": 142, + "FP": 119, + "IoU": 0.7808564231738035, + "TN": 5209, + "TP": 930, + "n_pred": 1049, + "n_ref": 1072 + }, + "3": { + "Dice": 0.966073546856465, + "FN": 18, + "FP": 125, + "IoU": 0.9343735658558971, + "TN": 4221, + "TP": 2036, + "n_pred": 2161, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8263370978052419, + "FN": 58, + "FP": 757, + "IoU": 0.7040668119099491, + "TN": 3646, + "TP": 1939, + "n_pred": 2696, + "n_ref": 1997 + }, + "2": { + "Dice": 0.8979391560353287, + "FN": 117, + "FP": 91, + "IoU": 0.8147818343722173, + "TN": 5277, + "TP": 915, + "n_pred": 1006, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9238578680203046, + "FN": 78, + "FP": 42, + "IoU": 0.8584905660377359, + "TN": 5552, + "TP": 728, + "n_pred": 770, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 9, + "IoU": 0.0, + "TN": 6391, + "TP": 0, + "n_pred": 9, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 6392, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 797, + "IoU": 0.0, + "TN": 5603, + "TP": 0, + "n_pred": 797, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 85, + "IoU": 0.0, + "TN": 6315, + "TP": 0, + "n_pred": 85, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.899880810488677, + "FN": 9, + "FP": 159, + "IoU": 0.8179848320693391, + "TN": 5477, + "TP": 755, + "n_pred": 914, + "n_ref": 764 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 9, + "IoU": 0.0, + "TN": 6391, + "TP": 0, + "n_pred": 9, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.6862604131094984, + "FN": 34.294117647058826, + "FP": 37.411764705882355, + "IoU": 0.6132383839488053, + "TN": 5973.509803921569, + "TP": 354.78431372549016, + "n_pred": 392.19607843137254, + "n_ref": 389.078431372549 + }, + "mean": { + "1": { + "Dice": 0.5604417210135711, + "FN": 45.1764705882353, + "FP": 23.764705882352942, + "IoU": 0.5174117463708652, + "TN": 5841.470588235294, + "TP": 489.5882352941176, + "n_pred": 513.3529411764706, + "n_ref": 534.7647058823529 + }, + "2": { + "Dice": 0.6130917953742409, + "FN": 48.0, + "FP": 46.76470588235294, + "IoU": 0.5218680316275361, + "TN": 6067.470588235294, + "TP": 237.76470588235293, + "n_pred": 284.52941176470586, + "n_ref": 285.7647058823529 + }, + "3": { + "Dice": 0.885247722940683, + "FN": 9.705882352941176, + "FP": 41.705882352941174, + "IoU": 0.8004353738480143, + "TN": 6011.588235294118, + "TP": 337.0, + "n_pred": 378.70588235294116, + "n_ref": 346.70588235294116 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9747421910028397, + "FN": 137, + "FP": 32, + "IoU": 0.9507288629737609, + "TN": 2970, + "TP": 3261, + "n_pred": 3293, + "n_ref": 3398 + }, + "2": { + "Dice": 0.9217221135029354, + "FN": 23, + "FP": 57, + "IoU": 0.8548094373865699, + "TN": 5849, + "TP": 471, + "n_pred": 528, + "n_ref": 494 + }, + "3": { + "Dice": 0.8225806451612904, + "FN": 44, + "FP": 0, + "IoU": 0.6986301369863014, + "TN": 6254, + "TP": 102, + "n_pred": 102, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 48, + "FP": 2, + "IoU": 0.0, + "TN": 6350, + "TP": 0, + "n_pred": 2, + "n_ref": 48 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7349081364829396, + "FN": 0, + "FP": 101, + "IoU": 0.5809128630705395, + "TN": 6159, + "TP": 140, + "n_pred": 241, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 29, + "IoU": 0.0, + "TN": 6371, + "TP": 0, + "n_pred": 29, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 126, + "IoU": 0.0, + "TN": 6274, + "TP": 0, + "n_pred": 126, + "n_ref": 0 + }, + "2": { + "Dice": 0.8194138039710054, + "FN": 439, + "FP": 134, + "IoU": 0.6940736785904965, + "TN": 4527, + "TP": 1300, + "n_pred": 1434, + "n_ref": 1739 + }, + "3": { + "Dice": 0.8177044261065266, + "FN": 27, + "FP": 459, + "IoU": 0.6916243654822335, + "TN": 4824, + "TP": 1090, + "n_pred": 1549, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9534206695778749, + "FN": 96, + "FP": 32, + "IoU": 0.9109874826147427, + "TN": 4962, + "TP": 1310, + "n_pred": 1342, + "n_ref": 1406 + }, + "2": { + "Dice": 0.7876506024096386, + "FN": 148, + "FP": 134, + "IoU": 0.6496894409937888, + "TN": 5595, + "TP": 523, + "n_pred": 657, + "n_ref": 671 + }, + "3": { + "Dice": 0.9570267131242741, + "FN": 0, + "FP": 148, + "IoU": 0.9175946547884187, + "TN": 4604, + "TP": 1648, + "n_pred": 1796, + "n_ref": 1648 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.690176322418136, + "FN": 30, + "FP": 93, + "IoU": 0.5269230769230769, + "TN": 6140, + "TP": 137, + "n_pred": 230, + "n_ref": 167 + }, + "2": { + "Dice": 0.47058823529411764, + "FN": 18, + "FP": 0, + "IoU": 0.3076923076923077, + "TN": 6374, + "TP": 8, + "n_pred": 8, + "n_ref": 26 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 178, + "IoU": 0.0, + "TN": 6222, + "TP": 0, + "n_pred": 178, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9639716312056738, + "FN": 53, + "FP": 74, + "IoU": 0.9304490690032858, + "TN": 4574, + "TP": 1699, + "n_pred": 1773, + "n_ref": 1752 + }, + "2": { + "Dice": 0.9013593586615546, + "FN": 167, + "FP": 116, + "IoU": 0.8204314720812182, + "TN": 4824, + "TP": 1293, + "n_pred": 1409, + "n_ref": 1460 + }, + "3": { + "Dice": 0.969551830311324, + "FN": 78, + "FP": 100, + "IoU": 0.9409030544488712, + "TN": 3388, + "TP": 2834, + "n_pred": 2934, + "n_ref": 2912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 14, + "IoU": 0.0, + "TN": 6386, + "TP": 0, + "n_pred": 14, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9012229539040452, + "FN": 404, + "FP": 16, + "IoU": 0.8202054794520548, + "TN": 4064, + "TP": 1916, + "n_pred": 1932, + "n_ref": 2320 + }, + "2": { + "Dice": 0.882183908045977, + "FN": 21, + "FP": 61, + "IoU": 0.7892030848329049, + "TN": 6011, + "TP": 307, + "n_pred": 368, + "n_ref": 328 + }, + "3": { + "Dice": 0.859375, + "FN": 16, + "FP": 2, + "IoU": 0.7534246575342466, + "TN": 6327, + "TP": 55, + "n_pred": 57, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.6874142899682368, + "FN": 52.490196078431374, + "FP": 56.8235294117647, + "IoU": 0.5995083296859778, + "TN": 6036.0, + "TP": 254.68627450980395, + "n_pred": 311.5098039215686, + "n_ref": 307.1764705882353 + }, + "mean": { + "1": { + "Dice": 0.6531318368048261, + "FN": 27.470588235294116, + "FP": 84.3529411764706, + "IoU": 0.5592421079442372, + "TN": 6068.470588235294, + "TP": 219.7058823529412, + "n_pred": 304.05882352941177, + "n_ref": 247.1764705882353 + }, + "2": { + "Dice": 0.6965611460264586, + "FN": 57.11764705882353, + "FP": 44.588235294117645, + "IoU": 0.6063517311532758, + "TN": 6038.294117647059, + "TP": 260.0, + "n_pred": 304.5882352941176, + "n_ref": 317.11764705882354 + }, + "3": { + "Dice": 0.7125498870734256, + "FN": 72.88235294117646, + "FP": 41.529411764705884, + "IoU": 0.6329311499604203, + "TN": 6001.235294117647, + "TP": 284.3529411764706, + "n_pred": 325.88235294117646, + "n_ref": 357.2352941176471 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7025986525505293, + "FN": 548, + "FP": 70, + "IoU": 0.5415430267062314, + "TN": 5052, + "TP": 730, + "n_pred": 800, + "n_ref": 1278 + }, + "3": { + "Dice": 0.7378902045209903, + "FN": 971, + "FP": 3, + "IoU": 0.5846481876332622, + "TN": 4055, + "TP": 1371, + "n_pred": 1374, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 6, + "IoU": 0.0, + "TN": 6394, + "TP": 0, + "n_pred": 6, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7995712754555199, + "FN": 26, + "FP": 722, + "IoU": 0.6660714285714285, + "TN": 4160, + "TP": 1492, + "n_pred": 2214, + "n_ref": 1518 + }, + "2": { + "Dice": 0.918648310387985, + "FN": 99, + "FP": 31, + "IoU": 0.8495370370370371, + "TN": 5536, + "TP": 734, + "n_pred": 765, + "n_ref": 833 + }, + "3": { + "Dice": 0.8666666666666667, + "FN": 0, + "FP": 52, + "IoU": 0.7647058823529411, + "TN": 6179, + "TP": 169, + "n_pred": 221, + "n_ref": 169 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 26, + "IoU": 0.0, + "TN": 6374, + "TP": 0, + "n_pred": 26, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9035369774919614, + "FN": 47, + "FP": 13, + "IoU": 0.8240469208211144, + "TN": 6059, + "TP": 281, + "n_pred": 294, + "n_ref": 328 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 6389, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9147202607278653, + "FN": 127, + "FP": 30, + "IoU": 0.8428428428428428, + "TN": 5401, + "TP": 842, + "n_pred": 872, + "n_ref": 969 + }, + "3": { + "Dice": 0.9838945827232797, + "FN": 21, + "FP": 23, + "IoU": 0.968299711815562, + "TN": 5012, + "TP": 1344, + "n_pred": 1367, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.677497969130788, + "FN": 312, + "FP": 482, + "IoU": 0.5122850122850123, + "TN": 4772, + "TP": 834, + "n_pred": 1316, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7595628415300546, + "FN": 96, + "FP": 344, + "IoU": 0.6123348017621145, + "TN": 5265, + "TP": 695, + "n_pred": 1039, + "n_ref": 791 + }, + "3": { + "Dice": 0.7526226734348562, + "FN": 197, + "FP": 534, + "IoU": 0.6033640803038525, + "TN": 4557, + "TP": 1112, + "n_pred": 1646, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8850529619458611, + "FN": 82, + "FP": 211, + "IoU": 0.7938071780436312, + "TN": 4979, + "TP": 1128, + "n_pred": 1339, + "n_ref": 1210 + }, + "2": { + "Dice": 0.883836810962317, + "FN": 101, + "FP": 272, + "IoU": 0.7918526785714286, + "TN": 4608, + "TP": 1419, + "n_pred": 1691, + "n_ref": 1520 + }, + "3": { + "Dice": 0.9342251950947603, + "FN": 50, + "FP": 68, + "IoU": 0.8765690376569037, + "TN": 5444, + "TP": 838, + "n_pred": 906, + "n_ref": 888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.7431697718386642, + "FN": 123.98148148148148, + "FP": 49.7037037037037, + "IoU": 0.6715991161832213, + "TN": 6410.75925925926, + "TP": 526.6666666666666, + "n_pred": 576.3703703703704, + "n_ref": 650.6481481481482 + }, + "mean": { + "1": { + "Dice": 0.5661981701921031, + "FN": 137.11111111111111, + "FP": 71.88888888888889, + "IoU": 0.49711460305013955, + "TN": 6503.611111111111, + "TP": 398.5, + "n_pred": 470.3888888888889, + "n_ref": 535.6111111111111 + }, + "2": { + "Dice": 0.737012764001357, + "FN": 114.88888888888889, + "FP": 48.94444444444444, + "IoU": 0.6440174941570082, + "TN": 6530.555555555556, + "TP": 416.72222222222223, + "n_pred": 465.6666666666667, + "n_ref": 531.6111111111111 + }, + "3": { + "Dice": 0.9262983813225326, + "FN": 119.94444444444444, + "FP": 28.27777777777778, + "IoU": 0.8736652513425163, + "TN": 6198.111111111111, + "TP": 764.7777777777778, + "n_pred": 793.0555555555555, + "n_ref": 884.7222222222222 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8959871589085072, + "FN": 289, + "FP": 359, + "IoU": 0.8115731317243384, + "TN": 9361, + "TP": 2791, + "n_pred": 3150, + "n_ref": 3080 + }, + "2": { + "Dice": 0.8467655276165914, + "FN": 696, + "FP": 17, + "IoU": 0.7342527021990309, + "TN": 10117, + "TP": 1970, + "n_pred": 1987, + "n_ref": 2666 + }, + "3": { + "Dice": 0.9398435392500675, + "FN": 8, + "FP": 215, + "IoU": 0.8865139949109415, + "TN": 10835, + "TP": 1742, + "n_pred": 1957, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 646, + "IoU": 0.0, + "TN": 5754, + "TP": 0, + "n_pred": 646, + "n_ref": 0 + }, + "2": { + "Dice": 0.5288326300984529, + "FN": 504, + "FP": 166, + "IoU": 0.35946462715105165, + "TN": 5354, + "TP": 376, + "n_pred": 542, + "n_ref": 880 + }, + "3": { + "Dice": 0.6980375606668073, + "FN": 1430, + "FP": 1, + "IoU": 0.5361426256077796, + "TN": 3315, + "TP": 1654, + "n_pred": 1655, + "n_ref": 3084 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 27, + "IoU": 0.0, + "TN": 6373, + "TP": 0, + "n_pred": 27, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9161205766710354, + "FN": 83, + "FP": 45, + "IoU": 0.845223700120919, + "TN": 5573, + "TP": 699, + "n_pred": 744, + "n_ref": 782 + }, + "3": { + "Dice": 0.9838756962767516, + "FN": 5, + "FP": 50, + "IoU": 0.9682631275245239, + "TN": 4667, + "TP": 1678, + "n_pred": 1728, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9277721261444557, + "FN": 332, + "FP": 23, + "IoU": 0.8652751423149905, + "TN": 3765, + "TP": 2280, + "n_pred": 2303, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9419180549302116, + "FN": 18, + "FP": 111, + "IoU": 0.8902127659574468, + "TN": 5225, + "TP": 1046, + "n_pred": 1157, + "n_ref": 1064 + }, + "3": { + "Dice": 0.98330122029544, + "FN": 35, + "FP": 17, + "IoU": 0.967150979153506, + "TN": 4817, + "TP": 1531, + "n_pred": 1548, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7952706907280647, + "FN": 179, + "FP": 150, + "IoU": 0.6601239669421488, + "TN": 5432, + "TP": 639, + "n_pred": 789, + "n_ref": 818 + }, + "2": { + "Dice": 0.897876643073812, + "FN": 119, + "FP": 83, + "IoU": 0.8146788990825689, + "TN": 5310, + "TP": 888, + "n_pred": 971, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9620678079892582, + "FN": 4, + "FP": 109, + "IoU": 0.9269081500646831, + "TN": 4854, + "TP": 1433, + "n_pred": 1542, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8263888888888888, + "FN": 404, + "FP": 46, + "IoU": 0.7041420118343196, + "TN": 4879, + "TP": 1071, + "n_pred": 1117, + "n_ref": 1475 + }, + "2": { + "Dice": 0.8825347758887172, + "FN": 103, + "FP": 49, + "IoU": 0.7897648686030428, + "TN": 5677, + "TP": 571, + "n_pred": 620, + "n_ref": 674 + }, + "3": { + "Dice": 0.970895112575508, + "FN": 17, + "FP": 36, + "IoU": 0.9434364994663821, + "TN": 5463, + "TP": 884, + "n_pred": 920, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1690885072655218, + "FN": 1226, + "FP": 32, + "IoU": 0.09235209235209235, + "TN": 11414, + "TP": 128, + "n_pred": 160, + "n_ref": 1354 + }, + "2": { + "Dice": 0.7768595041322314, + "FN": 365, + "FP": 256, + "IoU": 0.6351351351351351, + "TN": 11098, + "TP": 1081, + "n_pred": 1337, + "n_ref": 1446 + }, + "3": { + "Dice": 0.9200846784863721, + "FN": 523, + "FP": 81, + "IoU": 0.8519970595442293, + "TN": 8719, + "TP": 3477, + "n_pred": 3558, + "n_ref": 4000 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 6392, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9150779896013865, + "FN": 38, + "FP": 11, + "IoU": 0.8434504792332268, + "TN": 6087, + "TP": 264, + "n_pred": 275, + "n_ref": 302 + }, + "2": { + "Dice": 0.8422071636011617, + "FN": 180, + "FP": 146, + "IoU": 0.7274247491638796, + "TN": 5204, + "TP": 870, + "n_pred": 1016, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9522814350400557, + "FN": 137, + "FP": 0, + "IoU": 0.9089095744680851, + "TN": 4896, + "TP": 1367, + "n_pred": 1367, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.6819638724007019, + "FN": 100.31372549019608, + "FP": 59.56862745098039, + "IoU": 0.6117639066391666, + "TN": 6352.8823529411775, + "TP": 640.1764705882352, + "n_pred": 699.7450980392158, + "n_ref": 740.4901960784314 + }, + "mean": { + "1": { + "Dice": 0.5835536823080383, + "FN": 113.70588235294117, + "FP": 10.823529411764707, + "IoU": 0.5131649292831352, + "TN": 6566.058823529412, + "TP": 462.3529411764706, + "n_pred": 473.1764705882353, + "n_ref": 576.0588235294117 + }, + "2": { + "Dice": 0.7169058976054169, + "FN": 153.23529411764707, + "FP": 97.41176470588235, + "IoU": 0.6249552051389785, + "TN": 6314.235294117647, + "TP": 588.0588235294117, + "n_pred": 685.4705882352941, + "n_ref": 741.2941176470588 + }, + "3": { + "Dice": 0.7454320372886504, + "FN": 34.0, + "FP": 70.47058823529412, + "IoU": 0.6971715854953859, + "TN": 6178.35294117647, + "TP": 870.1176470588235, + "n_pred": 940.5882352941177, + "n_ref": 904.1176470588235 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8, + "FN": 2, + "FP": 5, + "IoU": 0.6666666666666666, + "TN": 6379, + "TP": 14, + "n_pred": 19, + "n_ref": 16 + }, + "2": { + "Dice": 0.77805239742956, + "FN": 85, + "FP": 364, + "IoU": 0.6367313915857605, + "TN": 5164, + "TP": 787, + "n_pred": 1151, + "n_ref": 872 + }, + "3": { + "Dice": 0.9432609154186881, + "FN": 269, + "FP": 0, + "IoU": 0.8926147704590819, + "TN": 3895, + "TP": 2236, + "n_pred": 2236, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.484375, + "FN": 521, + "FP": 7, + "IoU": 0.31958762886597936, + "TN": 5624, + "TP": 248, + "n_pred": 255, + "n_ref": 769 + }, + "2": { + "Dice": 0.8206185567010309, + "FN": 103, + "FP": 245, + "IoU": 0.6958041958041958, + "TN": 5256, + "TP": 796, + "n_pred": 1041, + "n_ref": 899 + }, + "3": { + "Dice": 0.9472837022132797, + "FN": 113, + "FP": 18, + "IoU": 0.8998470948012233, + "TN": 5092, + "TP": 1177, + "n_pred": 1195, + "n_ref": 1290 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8652734548688306, + "FN": 140, + "FP": 163, + "IoU": 0.762539184952978, + "TN": 5124, + "TP": 973, + "n_pred": 1136, + "n_ref": 1113 + }, + "3": { + "Dice": 0.976325441813938, + "FN": 18, + "FP": 124, + "IoU": 0.9537459283387623, + "TN": 3330, + "TP": 2928, + "n_pred": 3052, + "n_ref": 2946 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 12798, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + }, + "2": { + "Dice": 0.9116279069767442, + "FN": 122, + "FP": 106, + "IoU": 0.8376068376068376, + "TN": 11396, + "TP": 1176, + "n_pred": 1282, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9805330937406409, + "FN": 32, + "FP": 98, + "IoU": 0.9618096357226792, + "TN": 9396, + "TP": 3274, + "n_pred": 3372, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 9, + "IoU": 0.0, + "TN": 6391, + "TP": 0, + "n_pred": 9, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 253, + "IoU": 0.0, + "TN": 6147, + "TP": 0, + "n_pred": 253, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 110, + "IoU": 0.0, + "TN": 6290, + "TP": 0, + "n_pred": 110, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.761012183692596, + "FN": 247, + "FP": 8, + "IoU": 0.6142208774583964, + "TN": 5739, + "TP": 406, + "n_pred": 414, + "n_ref": 653 + }, + "2": { + "Dice": 0.764645072363887, + "FN": 1094, + "FP": 272, + "IoU": 0.6189679218967922, + "TN": 2815, + "TP": 2219, + "n_pred": 2491, + "n_ref": 3313 + }, + "3": { + "Dice": 0.6654010441385857, + "FN": 45, + "FP": 660, + "IoU": 0.49857752489331436, + "TN": 4994, + "TP": 701, + "n_pred": 1361, + "n_ref": 746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3521288837744534, + "FN": 545, + "FP": 18, + "IoU": 0.21368715083798884, + "TN": 5684, + "TP": 153, + "n_pred": 171, + "n_ref": 698 + }, + "2": { + "Dice": 0.7922291735265065, + "FN": 620, + "FP": 11, + "IoU": 0.6559432933478735, + "TN": 4566, + "TP": 1203, + "n_pred": 1214, + "n_ref": 1823 + }, + "3": { + "Dice": 0.9657701711491442, + "FN": 8, + "FP": 48, + "IoU": 0.933806146572104, + "TN": 5554, + "TP": 790, + "n_pred": 838, + "n_ref": 798 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9281630623912503, + "FN": 257, + "FP": 32, + "IoU": 0.8659554730983302, + "TN": 4244, + "TP": 1867, + "n_pred": 1899, + "n_ref": 2124 + }, + "2": { + "Dice": 0.9030674846625767, + "FN": 33, + "FP": 46, + "IoU": 0.8232662192393736, + "TN": 5953, + "TP": 368, + "n_pred": 414, + "n_ref": 401 + }, + "3": { + "Dice": 0.7752808988764045, + "FN": 40, + "FP": 0, + "IoU": 0.6330275229357798, + "TN": 6291, + "TP": 69, + "n_pred": 69, + "n_ref": 109 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 6397, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.15492957746478872, + "FN": 119, + "FP": 1, + "IoU": 0.08396946564885496, + "TN": 6269, + "TP": 11, + "n_pred": 12, + "n_ref": 130 + }, + "2": { + "Dice": 0.8115942028985508, + "FN": 32, + "FP": 46, + "IoU": 0.6829268292682927, + "TN": 6154, + "TP": 168, + "n_pred": 214, + "n_ref": 200 + }, + "3": { + "Dice": 0.0, + "FN": 24, + "FP": 0, + "IoU": 0.0, + "TN": 6376, + "TP": 0, + "n_pred": 0, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.974254397145042, + "FN": 54, + "FP": 47, + "IoU": 0.9498011928429424, + "TN": 4388, + "TP": 1911, + "n_pred": 1958, + "n_ref": 1965 + }, + "2": { + "Dice": 0.9065375302663439, + "FN": 81, + "FP": 112, + "IoU": 0.829052258635961, + "TN": 5271, + "TP": 936, + "n_pred": 1048, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9877997475809844, + "FN": 23, + "FP": 35, + "IoU": 0.9758935993349959, + "TN": 3994, + "TP": 2348, + "n_pred": 2383, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 12796, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + }, + "2": { + "Dice": 0.894092974484446, + "FN": 275, + "FP": 28, + "IoU": 0.8084702907711757, + "TN": 11218, + "TP": 1279, + "n_pred": 1307, + "n_ref": 1554 + }, + "3": { + "Dice": 0.9580973952434881, + "FN": 6, + "FP": 105, + "IoU": 0.9195652173913044, + "TN": 11420, + "TP": 1269, + "n_pred": 1374, + "n_ref": 1275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9642274009202909, + "FN": 188, + "FP": 53, + "IoU": 0.9309257666953282, + "TN": 2911, + "TP": 3248, + "n_pred": 3301, + "n_ref": 3436 + }, + "2": { + "Dice": 0.8720379146919431, + "FN": 20, + "FP": 7, + "IoU": 0.773109243697479, + "TN": 6281, + "TP": 92, + "n_pred": 99, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904355/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.6653648303508998, + "FN": 66.04727668845315, + "FP": 55.44270152505446, + "IoU": 0.5952812988925922, + "TN": 6147.8459694989115, + "TP": 423.4745098039215, + "n_pred": 478.9172113289761, + "n_ref": 489.52178649237476 + }, + "mean": { + "1": { + "Dice": 0.556674872490712, + "FN": 66.64575163398692, + "FP": 70.33071895424835, + "IoU": 0.48638334309175735, + "TN": 6198.251633986928, + "TP": 357.5823529411765, + "n_pred": 427.9130718954249, + "n_ref": 424.22810457516334 + }, + "2": { + "Dice": 0.6323169864791794, + "FN": 80.80130718954248, + "FP": 55.58888888888889, + "IoU": 0.5515549407268654, + "TN": 6203.20522875817, + "TP": 353.21503267973856, + "n_pred": 408.80392156862746, + "n_ref": 434.016339869281 + }, + "3": { + "Dice": 0.8071026320828079, + "FN": 50.69477124183006, + "FP": 40.408496732026144, + "IoU": 0.7479056128591537, + "TN": 6042.081045751633, + "TP": 559.6261437908497, + "n_pred": 600.0346405228759, + "n_ref": 610.3209150326796 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_001/summary.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_001/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..858ee8049d5ddaad16ea7f57c14064ede71e544f --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_001/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8474145621082395, + "FN": 1413.4399999999998, + "FP": 1038.94, + "IoU": 0.7513499824434305, + "TN": 843195.5866666666, + "TP": 8780.673333333332, + "n_pred": 9819.613333333333, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8030274300143598, + "FN": 1925.98, + "FP": 1169.3, + "IoU": 0.6828241202509292, + "TN": 843405.28, + "TP": 7928.08, + "n_pred": 9097.38, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8245986611648547, + "FN": 1622.94, + "FP": 1316.62, + "IoU": 0.7185059720908055, + "TN": 843056.52, + "TP": 8432.56, + "n_pred": 9749.18, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9146175951455038, + "FN": 691.4, + "FP": 630.9, + "IoU": 0.8527198549885568, + "TN": 843124.96, + "TP": 9981.38, + "n_pred": 10612.28, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9106352541463633, + "FN": 1261, + "FP": 738, + "IoU": 0.8359323703217334, + "TN": 1093736, + "TP": 10185, + "n_pred": 10923, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8562380372368192, + "FN": 1154, + "FP": 2977, + "IoU": 0.7486155905799307, + "TN": 1089487, + "TP": 12302, + "n_pred": 15279, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9412144572477953, + "FN": 888, + "FP": 2025, + "IoU": 0.888956657644951, + "TN": 1079687, + "TP": 23320, + "n_pred": 25345, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.834953171938505, + "FN": 153, + "FP": 1715, + "IoU": 0.7166691946003337, + "TN": 1099327, + "TP": 4725, + "n_pred": 6440, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8525714285714285, + "FN": 2552, + "FP": 2092, + "IoU": 0.7430278884462151, + "TN": 1087848, + "TP": 13428, + "n_pred": 15520, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9265509989484753, + "FN": 859, + "FP": 1935, + "IoU": 0.8631532546407406, + "TN": 1085503, + "TP": 17623, + "n_pred": 19558, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.689871165207488, + "FN": 4024, + "FP": 333, + "IoU": 0.5265674236661958, + "TN": 900237, + "TP": 4846, + "n_pred": 5179, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8788726008765302, + "FN": 2155, + "FP": 1051, + "IoU": 0.7839185819235694, + "TN": 894603, + "TP": 11631, + "n_pred": 12682, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9668017345560532, + "FN": 1012, + "FP": 389, + "IoU": 0.9357368928030825, + "TN": 887639, + "TP": 20400, + "n_pred": 20789, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6190385711571347, + "FN": 3720, + "FP": 290, + "IoU": 0.44826637314254264, + "TN": 902172, + "TP": 3258, + "n_pred": 3548, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8682448161014218, + "FN": 2202, + "FP": 1477, + "IoU": 0.7671666350230998, + "TN": 893639, + "TP": 12122, + "n_pred": 13599, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9651019570275079, + "FN": 1004, + "FP": 271, + "IoU": 0.9325575244644274, + "TN": 890535, + "TP": 17630, + "n_pred": 17901, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9235790165370715, + "FN": 3095, + "FP": 394, + "IoU": 0.8580091160670682, + "TN": 1401188, + "TP": 21083, + "n_pred": 21477, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8618865903461204, + "FN": 2210, + "FP": 1916, + "IoU": 0.7572941176470588, + "TN": 1408760, + "TP": 12874, + "n_pred": 14790, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9580306698950767, + "FN": 1536, + "FP": 544, + "IoU": 0.919442292796282, + "TN": 1399940, + "TP": 23740, + "n_pred": 24284, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8692731939059685, + "FN": 1631, + "FP": 3157, + "IoU": 0.7687738445936156, + "TN": 1405053, + "TP": 15919, + "n_pred": 19076, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8550052966101694, + "FN": 2154, + "FP": 2226, + "IoU": 0.7467329709725916, + "TN": 1408466, + "TP": 12914, + "n_pred": 15140, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9526199195261992, + "FN": 1629, + "FP": 467, + "IoU": 0.9095264816333578, + "TN": 1402593, + "TP": 21071, + "n_pred": 21538, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8381914440455182, + "FN": 2371, + "FP": 288, + "IoU": 0.7214540121516866, + "TN": 752502, + "TP": 6887, + "n_pred": 7175, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8618550140531368, + "FN": 1284, + "FP": 1321, + "IoU": 0.7572453638989842, + "TN": 751317, + "TP": 8126, + "n_pred": 9447, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9686010918615292, + "FN": 669, + "FP": 326, + "IoU": 0.9391139395422837, + "TN": 745706, + "TP": 15347, + "n_pred": 15673, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7799680340969632, + "FN": 1258, + "FP": 807, + "IoU": 0.6393013100436681, + "TN": 756323, + "TP": 3660, + "n_pred": 4467, + "n_ref": 4918 + }, + "2": { + "Dice": 0.801314097986002, + "FN": 2823, + "FP": 1350, + "IoU": 0.6684938036224977, + "TN": 749460, + "TP": 8415, + "n_pred": 9765, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9410566405385058, + "FN": 1287, + "FP": 44, + "IoU": 0.8886751421880228, + "TN": 750092, + "TP": 10625, + "n_pred": 10669, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7942450885532792, + "FN": 4404, + "FP": 487, + "IoU": 0.6587118833298444, + "TN": 1063941, + "TP": 9440, + "n_pred": 9927, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8577266158369462, + "FN": 1264, + "FP": 1591, + "IoU": 0.7508943373178606, + "TN": 1066811, + "TP": 8606, + "n_pred": 10197, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9594778502985697, + "FN": 1131, + "FP": 328, + "IoU": 0.9221118940849883, + "TN": 1059540, + "TP": 17273, + "n_pred": 17601, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8317479191438764, + "FN": 3503, + "FP": 459, + "IoU": 0.7119592875318066, + "TN": 1064517, + "TP": 9793, + "n_pred": 10252, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8571965956646448, + "FN": 1685, + "FP": 1352, + "IoU": 0.7500822909809085, + "TN": 1066120, + "TP": 9115, + "n_pred": 10467, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9415378451470735, + "FN": 1126, + "FP": 625, + "IoU": 0.8895337833575169, + "TN": 1062421, + "TP": 14100, + "n_pred": 14725, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7428376998979245, + "FN": 3674, + "FP": 105, + "IoU": 0.5908844863050774, + "TN": 1096683, + "TP": 5458, + "n_pred": 5563, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8259815389850695, + "FN": 1773, + "FP": 2318, + "IoU": 0.7035507246376812, + "TN": 1092120, + "TP": 9709, + "n_pred": 12027, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9005822914882685, + "FN": 979, + "FP": 1343, + "IoU": 0.8191447932081938, + "TN": 1093081, + "TP": 10517, + "n_pred": 11860, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7252078685864937, + "FN": 1264, + "FP": 91, + "IoU": 0.5688832325803372, + "TN": 1102777, + "TP": 1788, + "n_pred": 1879, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8593044350947621, + "FN": 1221, + "FP": 2424, + "IoU": 0.7533161884136438, + "TN": 1091144, + "TP": 11131, + "n_pred": 13555, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7932782075220058, + "FN": 306, + "FP": 1244, + "IoU": 0.6573828470380194, + "TN": 1101396, + "TP": 2974, + "n_pred": 4218, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8489252194974266, + "FN": 2154, + "FP": 341, + "IoU": 0.737506575486586, + "TN": 1137375, + "TP": 7010, + "n_pred": 7351, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9100629739108084, + "FN": 1713, + "FP": 1786, + "IoU": 0.8349683992076219, + "TN": 1125678, + "TP": 17703, + "n_pred": 19489, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9324418807900716, + "FN": 1261, + "FP": 285, + "IoU": 0.8734343020875972, + "TN": 1134665, + "TP": 10669, + "n_pred": 10954, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4283553058137022, + "FN": 1475, + "FP": 1170, + "IoU": 0.27255225522552257, + "TN": 1143244, + "TP": 991, + "n_pred": 2161, + "n_ref": 2466 + }, + "2": { + "Dice": 0.81228624895141, + "FN": 5554, + "FP": 3173, + "IoU": 0.6839074214929914, + "TN": 1119271, + "TP": 18882, + "n_pred": 22055, + "n_ref": 24436 + }, + "3": { + "Dice": 0.526410384423365, + "FN": 80, + "FP": 4663, + "IoU": 0.35722997696164793, + "TN": 1139501, + "TP": 2636, + "n_pred": 7299, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.947916218657262, + "FN": 826, + "FP": 385, + "IoU": 0.9009892895102608, + "TN": 788569, + "TP": 11020, + "n_pred": 11405, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8654034441052814, + "FN": 1121, + "FP": 1216, + "IoU": 0.762741116751269, + "TN": 790950, + "TP": 7513, + "n_pred": 8729, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9491747601739856, + "FN": 688, + "FP": 165, + "IoU": 0.9032660467226128, + "TN": 791982, + "TP": 7965, + "n_pred": 8130, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6644485761816225, + "FN": 544, + "FP": 2885, + "IoU": 0.49750879249706914, + "TN": 793976, + "TP": 3395, + "n_pred": 6280, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8913232914228806, + "FN": 1912, + "FP": 707, + "IoU": 0.8039523916460813, + "TN": 787441, + "TP": 10740, + "n_pred": 11447, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8815986677768526, + "FN": 199, + "FP": 512, + "IoU": 0.788266825491364, + "TN": 797442, + "TP": 2647, + "n_pred": 3159, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.947011771280869, + "FN": 636, + "FP": 881, + "IoU": 0.8993564652026803, + "TN": 1332767, + "TP": 13556, + "n_pred": 14437, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8782228901516931, + "FN": 1256, + "FP": 1337, + "IoU": 0.7828853721845432, + "TN": 1335897, + "TP": 9350, + "n_pred": 10687, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9666900420757363, + "FN": 786, + "FP": 354, + "IoU": 0.9355276552426196, + "TN": 1330158, + "TP": 16542, + "n_pred": 16896, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7740687679083095, + "FN": 465, + "FP": 2689, + "IoU": 0.6314128783452144, + "TN": 1339283, + "TP": 5403, + "n_pred": 8092, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8530612244897959, + "FN": 2082, + "FP": 1374, + "IoU": 0.7437722419928826, + "TN": 1334352, + "TP": 10032, + "n_pred": 11406, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9361944383621633, + "FN": 929, + "FP": 528, + "IoU": 0.8800428124485428, + "TN": 1335694, + "TP": 10689, + "n_pred": 11217, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7962662963820103, + "FN": 2140, + "FP": 3142, + "IoU": 0.661497052037939, + "TN": 836364, + "TP": 10322, + "n_pred": 13464, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8282551289863904, + "FN": 1293, + "FP": 2089, + "IoU": 0.7068562017855595, + "TN": 840431, + "TP": 8155, + "n_pred": 10244, + "n_ref": 9448 + }, + "3": { + "Dice": 0.964163119593574, + "FN": 933, + "FP": 372, + "IoU": 0.9308059384941676, + "TN": 833108, + "TP": 17555, + "n_pred": 17927, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7940038684719536, + "FN": 1191, + "FP": 1791, + "IoU": 0.6583801122694467, + "TN": 843239, + "TP": 5747, + "n_pred": 7538, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8549364701656714, + "FN": 1771, + "FP": 1460, + "IoU": 0.7466279799247177, + "TN": 839216, + "TP": 9521, + "n_pred": 10981, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9485620762216507, + "FN": 825, + "FP": 495, + "IoU": 0.9021569935512564, + "TN": 838477, + "TP": 12171, + "n_pred": 12666, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6314626601855944, + "FN": 2998, + "FP": 338, + "IoU": 0.46141427187600903, + "TN": 845774, + "TP": 2858, + "n_pred": 3196, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8559024570478477, + "FN": 1454, + "FP": 1666, + "IoU": 0.7481026965929275, + "TN": 839582, + "TP": 9266, + "n_pred": 10932, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9342964413973229, + "FN": 1509, + "FP": 101, + "IoU": 0.876694493375201, + "TN": 838911, + "TP": 11447, + "n_pred": 11548, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7329224447868515, + "FN": 677, + "FP": 363, + "IoU": 0.5784353465747872, + "TN": 849501, + "TP": 1427, + "n_pred": 1790, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8801316330728095, + "FN": 1888, + "FP": 1026, + "IoU": 0.7859241845430502, + "TN": 838356, + "TP": 10698, + "n_pred": 11724, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9436236166637696, + "FN": 603, + "FP": 370, + "IoU": 0.8932645897323388, + "TN": 842852, + "TP": 8143, + "n_pred": 8513, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8069315751960086, + "FN": 4031, + "FP": 303, + "IoU": 0.6763497871704877, + "TN": 783649, + "TP": 9057, + "n_pred": 9360, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7987273945077026, + "FN": 1699, + "FP": 1907, + "IoU": 0.6649010315026485, + "TN": 786279, + "TP": 7155, + "n_pred": 9062, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9432364385442893, + "FN": 1095, + "FP": 393, + "IoU": 0.892570933506606, + "TN": 783189, + "TP": 12363, + "n_pred": 12756, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7775458798128824, + "FN": 2266, + "FP": 825, + "IoU": 0.6360532202990699, + "TN": 788547, + "TP": 5402, + "n_pred": 6227, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8395335338504565, + "FN": 1667, + "FP": 1374, + "IoU": 0.7234448890505638, + "TN": 786044, + "TP": 7955, + "n_pred": 9329, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9414812728808786, + "FN": 674, + "FP": 365, + "IoU": 0.889432797701394, + "TN": 787643, + "TP": 8358, + "n_pred": 8723, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7939981244138793, + "FN": 3578, + "FP": 1035, + "IoU": 0.6583722135821669, + "TN": 883167, + "TP": 8890, + "n_pred": 9925, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8509589835257741, + "FN": 1531, + "FP": 1554, + "IoU": 0.7405819038008745, + "TN": 884778, + "TP": 8807, + "n_pred": 10361, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9411812727050084, + "FN": 723, + "FP": 718, + "IoU": 0.8888974556669237, + "TN": 883700, + "TP": 11529, + "n_pred": 12247, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7804918577600531, + "FN": 1659, + "FP": 983, + "IoU": 0.6400054503338329, + "TN": 889331, + "TP": 4697, + "n_pred": 5680, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8886478983212597, + "FN": 1275, + "FP": 1292, + "IoU": 0.7996096799375488, + "TN": 883860, + "TP": 10243, + "n_pred": 11535, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9262107425887878, + "FN": 937, + "FP": 320, + "IoU": 0.8625628690137765, + "TN": 887524, + "TP": 7889, + "n_pred": 8209, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9416726489590811, + "FN": 726, + "FP": 574, + "IoU": 0.8897744615906393, + "TN": 750254, + "TP": 10494, + "n_pred": 11068, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9048497233713801, + "FN": 1335, + "FP": 574, + "IoU": 0.8262333879482978, + "TN": 751062, + "TP": 9077, + "n_pred": 9651, + "n_ref": 10412 + }, + "3": { + "Dice": 0.968272220092841, + "FN": 384, + "FP": 361, + "IoU": 0.938495830925452, + "TN": 749935, + "TP": 11368, + "n_pred": 11729, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8638439698802617, + "FN": 293, + "FP": 810, + "IoU": 0.7603215993046502, + "TN": 757446, + "TP": 3499, + "n_pred": 4309, + "n_ref": 3792 + }, + "2": { + "Dice": 0.879949660658906, + "FN": 1843, + "FP": 828, + "IoU": 0.7856340288924558, + "TN": 749588, + "TP": 9789, + "n_pred": 10617, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9435049110110036, + "FN": 446, + "FP": 319, + "IoU": 0.8930518663497833, + "TN": 754895, + "TP": 6388, + "n_pred": 6707, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8229766115833377, + "FN": 148, + "FP": 3205, + "IoU": 0.6992015789001526, + "TN": 984181, + "TP": 7794, + "n_pred": 10999, + "n_ref": 7942 + }, + "2": { + "Dice": 0.7996525138451515, + "FN": 1384, + "FP": 2306, + "IoU": 0.6661841867197394, + "TN": 984274, + "TP": 7364, + "n_pred": 9670, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9636938572348773, + "FN": 89, + "FP": 1151, + "IoU": 0.9299316268294061, + "TN": 977631, + "TP": 16457, + "n_pred": 17608, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6726123278392414, + "FN": 263, + "FP": 2637, + "IoU": 0.5067188297329478, + "TN": 989449, + "TP": 2979, + "n_pred": 5616, + "n_ref": 3242 + }, + "2": { + "Dice": 0.786267029972752, + "FN": 1120, + "FP": 2802, + "IoU": 0.647808908045977, + "TN": 984192, + "TP": 7214, + "n_pred": 10016, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9059724882465611, + "FN": 208, + "FP": 1952, + "IoU": 0.8281075919146904, + "TN": 982762, + "TP": 10406, + "n_pred": 12358, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.931557555523298, + "FN": 1489, + "FP": 397, + "IoU": 0.8718837035527478, + "TN": 743295, + "TP": 12835, + "n_pred": 13232, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9081831745667394, + "FN": 899, + "FP": 701, + "IoU": 0.8318091033322821, + "TN": 748503, + "TP": 7913, + "n_pred": 8614, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9767708379248028, + "FN": 222, + "FP": 305, + "IoU": 0.9545963642629448, + "TN": 746409, + "TP": 11080, + "n_pred": 11385, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.755694948827996, + "FN": 658, + "FP": 2302, + "IoU": 0.6073228973202441, + "TN": 750478, + "TP": 4578, + "n_pred": 6880, + "n_ref": 5236 + }, + "2": { + "Dice": 0.9099876695437731, + "FN": 845, + "FP": 834, + "IoU": 0.834841628959276, + "TN": 747850, + "TP": 8487, + "n_pred": 9321, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9141890258641527, + "FN": 410, + "FP": 300, + "IoU": 0.8419412288512912, + "TN": 753524, + "TP": 3782, + "n_pred": 4082, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9311116965226555, + "FN": 877, + "FP": 169, + "IoU": 0.8711028958718423, + "TN": 630861, + "TP": 7069, + "n_pred": 7238, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8716369236343872, + "FN": 555, + "FP": 862, + "IoU": 0.7724791265253693, + "TN": 632748, + "TP": 4811, + "n_pred": 5673, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9553596417576267, + "FN": 507, + "FP": 131, + "IoU": 0.9145344943067649, + "TN": 631511, + "TP": 6827, + "n_pred": 6958, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6991260923845194, + "FN": 220, + "FP": 2190, + "IoU": 0.5374280230326296, + "TN": 633766, + "TP": 2800, + "n_pred": 4990, + "n_ref": 3020 + }, + "2": { + "Dice": 0.921007243877199, + "FN": 677, + "FP": 468, + "IoU": 0.8535805626598465, + "TN": 631156, + "TP": 6675, + "n_pred": 7143, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9258666666666666, + "FN": 152, + "FP": 265, + "IoU": 0.8619662363455809, + "TN": 635955, + "TP": 2604, + "n_pred": 2869, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9251275852806876, + "FN": 1663, + "FP": 567, + "IoU": 0.86068594989692, + "TN": 967033, + "TP": 13777, + "n_pred": 14344, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8654435787886403, + "FN": 1287, + "FP": 1390, + "IoU": 0.7628034733297892, + "TN": 971754, + "TP": 8609, + "n_pred": 9999, + "n_ref": 9896 + }, + "3": { + "Dice": 0.968938134810711, + "FN": 101, + "FP": 740, + "IoU": 0.939747814873191, + "TN": 969082, + "TP": 13117, + "n_pred": 13857, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8613785725202506, + "FN": 552, + "FP": 1262, + "IoU": 0.756510067114094, + "TN": 975590, + "TP": 5636, + "n_pred": 6898, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9049360146252285, + "FN": 1046, + "FP": 826, + "IoU": 0.8263772954924875, + "TN": 972258, + "TP": 8910, + "n_pred": 9736, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9255909884182135, + "FN": 156, + "FP": 782, + "IoU": 0.8614884819846427, + "TN": 976268, + "TP": 5834, + "n_pred": 6616, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.946629037315773, + "FN": 1086, + "FP": 616, + "IoU": 0.8986663491307454, + "TN": 1031780, + "TP": 15094, + "n_pred": 15710, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8915568461023007, + "FN": 725, + "FP": 1217, + "IoU": 0.8043324937027708, + "TN": 1038651, + "TP": 7983, + "n_pred": 9200, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9677000486933939, + "FN": 336, + "FP": 460, + "IoU": 0.9374213836477987, + "TN": 1035856, + "TP": 11924, + "n_pred": 12384, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8297008369934532, + "FN": 424, + "FP": 1631, + "IoU": 0.7089647358731058, + "TN": 1041515, + "TP": 5006, + "n_pred": 6637, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8581983805668016, + "FN": 1843, + "FP": 959, + "IoU": 0.7516177643825902, + "TN": 1037295, + "TP": 8479, + "n_pred": 9438, + "n_ref": 10322 + }, + "3": { + "Dice": 0.913770655983976, + "FN": 518, + "FP": 343, + "IoU": 0.8412317905218514, + "TN": 1043153, + "TP": 4562, + "n_pred": 4905, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7567111439270081, + "FN": 3988, + "FP": 625, + "IoU": 0.6086366335793671, + "TN": 477429, + "TP": 7174, + "n_pred": 7799, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7653218884120172, + "FN": 488, + "FP": 879, + "IoU": 0.6198553948832035, + "TN": 485620, + "TP": 2229, + "n_pred": 3108, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9494066208619613, + "FN": 91, + "FP": 395, + "IoU": 0.9036860879904876, + "TN": 484170, + "TP": 4560, + "n_pred": 4955, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7750062152979199, + "FN": 1975, + "FP": 740, + "IoU": 0.6326613448789068, + "TN": 481825, + "TP": 4676, + "n_pred": 5416, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8407722007722007, + "FN": 638, + "FP": 393, + "IoU": 0.7252864375166533, + "TN": 485463, + "TP": 2722, + "n_pred": 3115, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8639319659829915, + "FN": 63, + "FP": 481, + "IoU": 0.7604579480405108, + "TN": 486945, + "TP": 1727, + "n_pred": 2208, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8925145206552242, + "FN": 2200, + "FP": 1094, + "IoU": 0.8058927519151444, + "TN": 463510, + "TP": 13676, + "n_pred": 14770, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8009118541033434, + "FN": 830, + "FP": 1004, + "IoU": 0.6679340937896071, + "TN": 474957, + "TP": 3689, + "n_pred": 4693, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9448919940115491, + "FN": 333, + "FP": 440, + "IoU": 0.8955405405405406, + "TN": 473080, + "TP": 6627, + "n_pred": 7067, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8959342165372316, + "FN": 1805, + "FP": 473, + "IoU": 0.8114862628268785, + "TN": 468396, + "TP": 9806, + "n_pred": 10279, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8114004914004914, + "FN": 1534, + "FP": 385, + "IoU": 0.6826525549859435, + "TN": 474433, + "TP": 4128, + "n_pred": 4513, + "n_ref": 5662 + }, + "3": { + "Dice": 0.870873786407767, + "FN": 115, + "FP": 683, + "IoU": 0.7712811693895099, + "TN": 476991, + "TP": 2691, + "n_pred": 3374, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8320589384383547, + "FN": 5764, + "FP": 254, + "IoU": 0.7124151772914078, + "TN": 623714, + "TP": 14908, + "n_pred": 15162, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7560701438848921, + "FN": 2340, + "FP": 2000, + "IoU": 0.6078076992589915, + "TN": 633574, + "TP": 6726, + "n_pred": 8726, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9327207836585921, + "FN": 1715, + "FP": 57, + "IoU": 0.8739238705087158, + "TN": 630585, + "TP": 12283, + "n_pred": 12340, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8481031199648454, + "FN": 3752, + "FP": 396, + "IoU": 0.736266531027467, + "TN": 628912, + "TP": 11580, + "n_pred": 11976, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8410978692668833, + "FN": 2850, + "FP": 670, + "IoU": 0.7257712683078841, + "TN": 631804, + "TP": 9316, + "n_pred": 9986, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9027844290894165, + "FN": 964, + "FP": 457, + "IoU": 0.8227958598328968, + "TN": 636621, + "TP": 6598, + "n_pred": 7055, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8629401140015481, + "FN": 3658, + "FP": 2185, + "IoU": 0.7589223088666089, + "TN": 540243, + "TP": 18394, + "n_pred": 20579, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7697522206638616, + "FN": 1176, + "FP": 794, + "IoU": 0.6256887706631199, + "TN": 559217, + "TP": 3293, + "n_pred": 4087, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9541469567959634, + "FN": 333, + "FP": 394, + "IoU": 0.9123145579544084, + "TN": 556189, + "TP": 7564, + "n_pred": 7958, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6627134044282913, + "FN": 1503, + "FP": 5550, + "IoU": 0.49556572736375337, + "TN": 550498, + "TP": 6929, + "n_pred": 12479, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8510727808161548, + "FN": 817, + "FP": 599, + "IoU": 0.7407543024533138, + "TN": 559018, + "TP": 4046, + "n_pred": 4645, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8920252123869553, + "FN": 197, + "FP": 591, + "IoU": 0.8050952263170913, + "TN": 560437, + "TP": 3255, + "n_pred": 3846, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7087802352244988, + "FN": 2784, + "FP": 1153, + "IoU": 0.548923006416132, + "TN": 410152, + "TP": 4791, + "n_pred": 5944, + "n_ref": 7575 + }, + "2": { + "Dice": 0.06994391290003299, + "FN": 2750, + "FP": 69, + "IoU": 0.03623931623931624, + "TN": 415955, + "TP": 106, + "n_pred": 175, + "n_ref": 2856 + }, + "3": { + "Dice": 0.49964739069111425, + "FN": 2782, + "FP": 56, + "IoU": 0.3330199764982374, + "TN": 414625, + "TP": 1417, + "n_pred": 1473, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.678741658722593, + "FN": 1177, + "FP": 2193, + "IoU": 0.5137085137085137, + "TN": 411950, + "TP": 3560, + "n_pred": 5753, + "n_ref": 4737 + }, + "2": { + "Dice": 0.24271844660194175, + "FN": 2568, + "FP": 84, + "IoU": 0.13812154696132597, + "TN": 415803, + "TP": 425, + "n_pred": 509, + "n_ref": 2993 + }, + "3": { + "Dice": 0.7958772126372395, + "FN": 607, + "FP": 304, + "IoU": 0.6609601786378861, + "TN": 416193, + "TP": 1776, + "n_pred": 2080, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.907995117485505, + "FN": 1664, + "FP": 748, + "IoU": 0.8314936425876764, + "TN": 482196, + "TP": 11902, + "n_pred": 12650, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8669977549493163, + "FN": 1300, + "FP": 655, + "IoU": 0.7652215683919779, + "TN": 488183, + "TP": 6372, + "n_pred": 7027, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9526119402985075, + "FN": 113, + "FP": 649, + "IoU": 0.9095119344495903, + "TN": 488089, + "TP": 7659, + "n_pred": 8308, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8645439388394128, + "FN": 2632, + "FP": 699, + "IoU": 0.7614067760189098, + "TN": 482549, + "TP": 10630, + "n_pred": 11329, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8685540950455005, + "FN": 1604, + "FP": 476, + "IoU": 0.7676496872207328, + "TN": 487558, + "TP": 6872, + "n_pred": 7348, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8922131694937893, + "FN": 60, + "FP": 747, + "IoU": 0.8054014950566675, + "TN": 492363, + "TP": 3340, + "n_pred": 4087, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_001/summary_cross_val.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_001/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..698ad28b1a148b89113695c93ec16b6f26fbf2cb --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_001/summary_cross_val.json @@ -0,0 +1,4020 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.7145238896930378, + "FN": 86.58730158730158, + "FP": 140.73015873015873, + "IoU": 0.6358975834124015, + "TN": 7300.142857142858, + "TP": 701.111111111111, + "n_pred": 841.8412698412699, + "n_ref": 787.6984126984127 + }, + "mean": { + "1": { + "Dice": 0.5082983767514047, + "FN": 142.8095238095238, + "FP": 241.66666666666666, + "IoU": 0.44367147162043363, + "TN": 7128.952380952381, + "TP": 715.1428571428571, + "n_pred": 956.8095238095239, + "n_ref": 857.952380952381 + }, + "2": { + "Dice": 0.7770106027882656, + "FN": 80.66666666666667, + "FP": 107.80952380952381, + "IoU": 0.6773173076114984, + "TN": 7440.0952380952385, + "TP": 600.0, + "n_pred": 707.8095238095239, + "n_ref": 680.6666666666666 + }, + "3": { + "Dice": 0.8582626895394433, + "FN": 36.285714285714285, + "FP": 72.71428571428571, + "IoU": 0.7867039710052727, + "TN": 7331.380952380952, + "TP": 788.1904761904761, + "n_pred": 860.9047619047619, + "n_ref": 824.4761904761905 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.75, + "FN": 4, + "FP": 4, + "IoU": 0.6, + "TN": 6380, + "TP": 12, + "n_pred": 16, + "n_ref": 16 + }, + "2": { + "Dice": 0.7678936605316974, + "FN": 121, + "FP": 333, + "IoU": 0.6232365145228216, + "TN": 5195, + "TP": 751, + "n_pred": 1084, + "n_ref": 872 + }, + "3": { + "Dice": 0.9351753453772582, + "FN": 305, + "FP": 0, + "IoU": 0.8782435129740519, + "TN": 3895, + "TP": 2200, + "n_pred": 2200, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 668, + "IoU": 0.0, + "TN": 5732, + "TP": 0, + "n_pred": 668, + "n_ref": 0 + }, + "2": { + "Dice": 0.8458498023715415, + "FN": 24, + "FP": 288, + "IoU": 0.7328767123287672, + "TN": 5232, + "TP": 856, + "n_pred": 1144, + "n_ref": 880 + }, + "3": { + "Dice": 0.9770133950719365, + "FN": 130, + "FP": 9, + "IoU": 0.9550598124797931, + "TN": 3307, + "TP": 2954, + "n_pred": 2963, + "n_ref": 3084 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8, + "FN": 12, + "FP": 6, + "IoU": 0.6666666666666666, + "TN": 6346, + "TP": 36, + "n_pred": 42, + "n_ref": 48 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 790, + "IoU": 0.0, + "TN": 5610, + "TP": 0, + "n_pred": 790, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 12798, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + }, + "2": { + "Dice": 0.9040247678018576, + "FN": 130, + "FP": 118, + "IoU": 0.8248587570621468, + "TN": 11384, + "TP": 1168, + "n_pred": 1286, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9795488721804512, + "FN": 49, + "FP": 87, + "IoU": 0.9599174771588564, + "TN": 9407, + "TP": 3257, + "n_pred": 3344, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.45012787723785164, + "FN": 180, + "FP": 35, + "IoU": 0.29042904290429045, + "TN": 12497, + "TP": 88, + "n_pred": 123, + "n_ref": 268 + }, + "2": { + "Dice": 0.8778765690376569, + "FN": 737, + "FP": 197, + "IoU": 0.7823351200186437, + "TN": 8509, + "TP": 3357, + "n_pred": 3554, + "n_ref": 4094 + }, + "3": { + "Dice": 0.7823240589198036, + "FN": 35, + "FP": 231, + "IoU": 0.6424731182795699, + "TN": 12056, + "TP": 478, + "n_pred": 709, + "n_ref": 513 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1057, + "IoU": 0.0, + "TN": 18143, + "TP": 0, + "n_pred": 1057, + "n_ref": 0 + }, + "2": { + "Dice": 0.8328912466843501, + "FN": 96, + "FP": 30, + "IoU": 0.7136363636363636, + "TN": 18760, + "TP": 314, + "n_pred": 344, + "n_ref": 410 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 6399, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "2": { + "Dice": 0.898989898989899, + "FN": 226, + "FP": 114, + "IoU": 0.8165137614678899, + "TN": 4547, + "TP": 1513, + "n_pred": 1627, + "n_ref": 1739 + }, + "3": { + "Dice": 0.9597878921785241, + "FN": 31, + "FP": 60, + "IoU": 0.9226847918436704, + "TN": 5223, + "TP": 1086, + "n_pred": 1146, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9046060322656068, + "FN": 703, + "FP": 113, + "IoU": 0.8258271077908218, + "TN": 1715, + "TP": 3869, + "n_pred": 3982, + "n_ref": 4572 + }, + "2": { + "Dice": 0.8865979381443299, + "FN": 26, + "FP": 128, + "IoU": 0.7962962962962963, + "TN": 5644, + "TP": 602, + "n_pred": 730, + "n_ref": 628 + }, + "3": { + "Dice": 0.9626334519572953, + "FN": 35, + "FP": 7, + "IoU": 0.9279588336192109, + "TN": 5817, + "TP": 541, + "n_pred": 548, + "n_ref": 576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9750242013552759, + "FN": 94, + "FP": 35, + "IoU": 0.9512655836796373, + "TN": 3753, + "TP": 2518, + "n_pred": 2553, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9265639165911151, + "FN": 42, + "FP": 120, + "IoU": 0.8631756756756757, + "TN": 5216, + "TP": 1022, + "n_pred": 1142, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9888782967905942, + "FN": 10, + "FP": 25, + "IoU": 0.9780012570710245, + "TN": 4809, + "TP": 1556, + "n_pred": 1581, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8596569991918829, + "FN": 1515, + "FP": 48, + "IoU": 0.7538582677165354, + "TN": 6450, + "TP": 4787, + "n_pred": 4835, + "n_ref": 6302 + }, + "2": { + "Dice": 0.883352208380521, + "FN": 137, + "FP": 172, + "IoU": 0.7910750507099391, + "TN": 11321, + "TP": 1170, + "n_pred": 1342, + "n_ref": 1307 + }, + "3": { + "Dice": 0.9645123384253819, + "FN": 32, + "FP": 119, + "IoU": 0.9314571039491603, + "TN": 10597, + "TP": 2052, + "n_pred": 2171, + "n_ref": 2084 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7119553072625698, + "FN": 39, + "FP": 1250, + "IoU": 0.5527411519777932, + "TN": 9918, + "TP": 1593, + "n_pred": 2843, + "n_ref": 1632 + }, + "2": { + "Dice": 0.7725017717930546, + "FN": 15, + "FP": 306, + "IoU": 0.6293302540415704, + "TN": 11934, + "TP": 545, + "n_pred": 851, + "n_ref": 560 + }, + "3": { + "Dice": 0.5593667546174143, + "FN": 2, + "FP": 666, + "IoU": 0.3882783882783883, + "TN": 11708, + "TP": 424, + "n_pred": 1090, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 56, + "IoU": 0.0, + "TN": 6344, + "TP": 0, + "n_pred": 56, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.738894472361809, + "FN": 295, + "FP": 1004, + "IoU": 0.5859101051960471, + "TN": 3263, + "TP": 1838, + "n_pred": 2842, + "n_ref": 2133 + }, + "2": { + "Dice": 0.5550239234449761, + "FN": 18, + "FP": 261, + "IoU": 0.3841059602649007, + "TN": 5947, + "TP": 174, + "n_pred": 435, + "n_ref": 192 + }, + "3": { + "Dice": 0.769741207697412, + "FN": 29, + "FP": 318, + "IoU": 0.6256742179072277, + "TN": 5473, + "TP": 580, + "n_pred": 898, + "n_ref": 609 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 49, + "IoU": 0.0, + "TN": 6351, + "TP": 0, + "n_pred": 49, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9272419627749577, + "FN": 28, + "FP": 15, + "IoU": 0.8643533123028391, + "TN": 6083, + "TP": 274, + "n_pred": 289, + "n_ref": 302 + }, + "2": { + "Dice": 0.9104618284637135, + "FN": 84, + "FP": 106, + "IoU": 0.8356401384083045, + "TN": 5244, + "TP": 966, + "n_pred": 1072, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9685577580314423, + "FN": 87, + "FP": 5, + "IoU": 0.9390324718356527, + "TN": 4891, + "TP": 1417, + "n_pred": 1422, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.015267175572519083, + "FN": 129, + "FP": 0, + "IoU": 0.007692307692307693, + "TN": 6270, + "TP": 1, + "n_pred": 1, + "n_ref": 130 + }, + "2": { + "Dice": 0.8161209068010076, + "FN": 38, + "FP": 35, + "IoU": 0.6893617021276596, + "TN": 6165, + "TP": 162, + "n_pred": 197, + "n_ref": 200 + }, + "3": { + "Dice": 0.45161290322580644, + "FN": 17, + "FP": 0, + "IoU": 0.2916666666666667, + "TN": 6376, + "TP": 7, + "n_pred": 7, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8683430276268123, + "FN": 280.26984126984127, + "FP": 60.111111111111114, + "IoU": 0.7896325460781481, + "TN": 7560.507936507936, + "TP": 1241.9682539682537, + "n_pred": 1302.079365079365, + "n_ref": 1522.2380952380952 + }, + "mean": { + "1": { + "Dice": 0.7997520675734959, + "FN": 650.0, + "FP": 68.76190476190476, + "IoU": 0.7121337217047159, + "TN": 6343.238095238095, + "TP": 2080.8571428571427, + "n_pred": 2149.6190476190477, + "n_ref": 2730.8571428571427 + }, + "2": { + "Dice": 0.8705431814650969, + "FN": 129.42857142857142, + "FP": 79.95238095238095, + "IoU": 0.7742327369078456, + "TN": 8216.57142857143, + "TP": 716.9047619047619, + "n_pred": 796.8571428571429, + "n_ref": 846.3333333333334 + }, + "3": { + "Dice": 0.9347338338418442, + "FN": 61.38095238095238, + "FP": 31.61904761904762, + "IoU": 0.882531179621883, + "TN": 8121.714285714285, + "TP": 928.1428571428571, + "n_pred": 959.7619047619048, + "n_ref": 989.5238095238095 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.927582113177681, + "FN": 106, + "FP": 77, + "IoU": 0.8649446494464945, + "TN": 5045, + "TP": 1172, + "n_pred": 1249, + "n_ref": 1278 + }, + "3": { + "Dice": 0.9824713265526942, + "FN": 72, + "FP": 9, + "IoU": 0.9655465759251383, + "TN": 4049, + "TP": 2270, + "n_pred": 2279, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8967452300785634, + "FN": 358, + "FP": 10, + "IoU": 0.8128179043743642, + "TN": 10834, + "TP": 1598, + "n_pred": 1608, + "n_ref": 1956 + }, + "2": { + "Dice": 0.8786324786324786, + "FN": 106, + "FP": 36, + "IoU": 0.7835365853658537, + "TN": 12144, + "TP": 514, + "n_pred": 550, + "n_ref": 620 + }, + "3": { + "Dice": 0.9365942028985508, + "FN": 39, + "FP": 31, + "IoU": 0.8807495741056218, + "TN": 12213, + "TP": 517, + "n_pred": 548, + "n_ref": 556 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9162415665624486, + "FN": 296, + "FP": 213, + "IoU": 0.8454296993622836, + "TN": 9507, + "TP": 2784, + "n_pred": 2997, + "n_ref": 3080 + }, + "2": { + "Dice": 0.8737823834196892, + "FN": 558, + "FP": 51, + "IoU": 0.7758557232241443, + "TN": 10083, + "TP": 2108, + "n_pred": 2159, + "n_ref": 2666 + }, + "3": { + "Dice": 0.9557174887892377, + "FN": 45, + "FP": 113, + "IoU": 0.9151905528717122, + "TN": 10937, + "TP": 1705, + "n_pred": 1818, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9301319489508977, + "FN": 583, + "FP": 63, + "IoU": 0.8693894055802669, + "TN": 7854, + "TP": 4300, + "n_pred": 4363, + "n_ref": 4883 + }, + "2": { + "Dice": 0.8295345104333869, + "FN": 247, + "FP": 284, + "IoU": 0.7087218869994515, + "TN": 10977, + "TP": 1292, + "n_pred": 1576, + "n_ref": 1539 + }, + "3": { + "Dice": 0.9646965489884967, + "FN": 144, + "FP": 34, + "IoU": 0.9318007662835249, + "TN": 10190, + "TP": 2432, + "n_pred": 2466, + "n_ref": 2576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7250883392226148, + "FN": 219, + "FP": 170, + "IoU": 0.5687361419068736, + "TN": 11898, + "TP": 513, + "n_pred": 683, + "n_ref": 732 + }, + "3": { + "Dice": 0.8571428571428571, + "FN": 146, + "FP": 40, + "IoU": 0.75, + "TN": 12056, + "TP": 558, + "n_pred": 598, + "n_ref": 704 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7641921397379913, + "FN": 35, + "FP": 181, + "IoU": 0.6183745583038869, + "TN": 5834, + "TP": 350, + "n_pred": 531, + "n_ref": 385 + }, + "2": { + "Dice": 0.8823768823768824, + "FN": 127, + "FP": 162, + "IoU": 0.7895120174799709, + "TN": 5027, + "TP": 1084, + "n_pred": 1246, + "n_ref": 1211 + }, + "3": { + "Dice": 0.9656884875846501, + "FN": 93, + "FP": 59, + "IoU": 0.9336534264513313, + "TN": 4109, + "TP": 2139, + "n_pred": 2198, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9081364829396326, + "FN": 90, + "FP": 50, + "IoU": 0.8317307692307693, + "TN": 5568, + "TP": 692, + "n_pred": 742, + "n_ref": 782 + }, + "3": { + "Dice": 0.9841082989994114, + "FN": 11, + "FP": 43, + "IoU": 0.9687137891077636, + "TN": 4674, + "TP": 1672, + "n_pred": 1715, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9736434108527132, + "FN": 14, + "FP": 3, + "IoU": 0.9486404833836858, + "TN": 6069, + "TP": 314, + "n_pred": 317, + "n_ref": 328 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8333333333333334, + "FN": 14, + "FP": 6, + "IoU": 0.7142857142857143, + "TN": 6330, + "TP": 50, + "n_pred": 56, + "n_ref": 64 + }, + "2": { + "Dice": 0.8850628199162401, + "FN": 121, + "FP": 126, + "IoU": 0.7938230383973289, + "TN": 5202, + "TP": 951, + "n_pred": 1077, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9717703349282296, + "FN": 23, + "FP": 95, + "IoU": 0.9450907398790135, + "TN": 4251, + "TP": 2031, + "n_pred": 2126, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8364370652905542, + "FN": 133, + "FP": 596, + "IoU": 0.7188584650983417, + "TN": 3807, + "TP": 1864, + "n_pred": 2460, + "n_ref": 1997 + }, + "2": { + "Dice": 0.8936170212765957, + "FN": 87, + "FP": 138, + "IoU": 0.8076923076923077, + "TN": 5230, + "TP": 945, + "n_pred": 1083, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9179056237879767, + "FN": 96, + "FP": 31, + "IoU": 0.8482676224611708, + "TN": 5563, + "TP": 710, + "n_pred": 741, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9685763362635142, + "FN": 293, + "FP": 18, + "IoU": 0.9390673981191222, + "TN": 1296, + "TP": 4793, + "n_pred": 4811, + "n_ref": 5086 + }, + "2": { + "Dice": 0.9585253456221198, + "FN": 2, + "FP": 34, + "IoU": 0.9203539823008849, + "TN": 5948, + "TP": 416, + "n_pred": 450, + "n_ref": 418 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7953783736108662, + "FN": 2176, + "FP": 144, + "IoU": 0.6602723678430225, + "TN": 5971, + "TP": 4509, + "n_pred": 4653, + "n_ref": 6685 + }, + "2": { + "Dice": 0.9178515007898894, + "FN": 163, + "FP": 149, + "IoU": 0.8481751824817518, + "TN": 10745, + "TP": 1743, + "n_pred": 1892, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9784496622708266, + "FN": 96, + "FP": 38, + "IoU": 0.957808564231738, + "TN": 9624, + "TP": 3042, + "n_pred": 3080, + "n_ref": 3138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8018059736050012, + "FN": 3380, + "FP": 44, + "IoU": 0.6691787439613527, + "TN": 2450, + "TP": 6926, + "n_pred": 6970, + "n_ref": 10306 + }, + "2": { + "Dice": 0.8537604456824512, + "FN": 133, + "FP": 77, + "IoU": 0.7448359659781288, + "TN": 11977, + "TP": 613, + "n_pred": 690, + "n_ref": 746 + }, + "3": { + "Dice": 0.9298245614035088, + "FN": 21, + "FP": 19, + "IoU": 0.8688524590163934, + "TN": 12495, + "TP": 265, + "n_pred": 284, + "n_ref": 286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8408085157277838, + "FN": 3939, + "FP": 54, + "IoU": 0.7253404869995873, + "TN": 4662, + "TP": 10545, + "n_pred": 10599, + "n_ref": 14484 + }, + "2": { + "Dice": 0.828158844765343, + "FN": 237, + "FP": 239, + "IoU": 0.7067159581022797, + "TN": 17577, + "TP": 1147, + "n_pred": 1386, + "n_ref": 1384 + }, + "3": { + "Dice": 0.9183673469387755, + "FN": 35, + "FP": 37, + "IoU": 0.8490566037735849, + "TN": 18723, + "TP": 405, + "n_pred": 442, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 12793, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + }, + "2": { + "Dice": 0.8570391872278664, + "FN": 373, + "FP": 21, + "IoU": 0.7498412698412699, + "TN": 11225, + "TP": 1181, + "n_pred": 1202, + "n_ref": 1554 + }, + "3": { + "Dice": 0.7633302151543498, + "FN": 459, + "FP": 47, + "IoU": 0.6172465960665658, + "TN": 11478, + "TP": 816, + "n_pred": 863, + "n_ref": 1275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6645830373632619, + "FN": 2319, + "FP": 42, + "IoU": 0.4976595744680851, + "TN": 1700, + "TP": 2339, + "n_pred": 2381, + "n_ref": 4658 + }, + "2": { + "Dice": 0.868421052631579, + "FN": 127, + "FP": 53, + "IoU": 0.7674418604651163, + "TN": 5626, + "TP": 594, + "n_pred": 647, + "n_ref": 721 + }, + "3": { + "Dice": 0.9602067183462533, + "FN": 9, + "FP": 68, + "IoU": 0.9234592445328031, + "TN": 5394, + "TP": 929, + "n_pred": 997, + "n_ref": 938 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9746520146520147, + "FN": 110, + "FP": 63, + "IoU": 0.9505573020863104, + "TN": 2901, + "TP": 3326, + "n_pred": 3389, + "n_ref": 3436 + }, + "2": { + "Dice": 0.8411214953271028, + "FN": 22, + "FP": 12, + "IoU": 0.7258064516129032, + "TN": 6276, + "TP": 90, + "n_pred": 102, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.694746504212001, + "FN": 92.82539682539682, + "FP": 300.63492063492066, + "IoU": 0.6109050668951991, + "TN": 7464.873015873015, + "TP": 675.0, + "n_pred": 975.6349206349206, + "n_ref": 767.8253968253968 + }, + "mean": { + "1": { + "Dice": 0.5719406475598977, + "FN": 46.04761904761905, + "FP": 374.76190476190476, + "IoU": 0.5007138956516307, + "TN": 7131.666666666667, + "TP": 980.8571428571429, + "n_pred": 1355.6190476190477, + "n_ref": 1026.904761904762 + }, + "2": { + "Dice": 0.7616908533785159, + "FN": 146.47619047619048, + "FP": 187.76190476190476, + "IoU": 0.6668174938833621, + "TN": 7506.857142857143, + "TP": 692.2380952380952, + "n_pred": 880.0, + "n_ref": 838.7142857142857 + }, + "3": { + "Dice": 0.7506080116975896, + "FN": 85.95238095238095, + "FP": 339.3809523809524, + "IoU": 0.6651838111506045, + "TN": 7756.0952380952385, + "TP": 351.9047619047619, + "n_pred": 691.2857142857143, + "n_ref": 437.85714285714283 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 441, + "IoU": 0.0, + "TN": 5959, + "TP": 0, + "n_pred": 441, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9892147587511826, + "FN": 54, + "FP": 60, + "IoU": 0.9786596780232123, + "TN": 1058, + "TP": 5228, + "n_pred": 5288, + "n_ref": 5282 + }, + "2": { + "Dice": 0.8946015424164524, + "FN": 18, + "FP": 64, + "IoU": 0.8093023255813954, + "TN": 5970, + "TP": 348, + "n_pred": 412, + "n_ref": 366 + }, + "3": { + "Dice": 0.9498069498069498, + "FN": 39, + "FP": 0, + "IoU": 0.9044117647058824, + "TN": 5992, + "TP": 369, + "n_pred": 369, + "n_ref": 408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9831448687860038, + "FN": 58, + "FP": 100, + "IoU": 0.9668485102811583, + "TN": 1634, + "TP": 4608, + "n_pred": 4708, + "n_ref": 4666 + }, + "2": { + "Dice": 0.9165009940357853, + "FN": 23, + "FP": 61, + "IoU": 0.8458715596330275, + "TN": 5855, + "TP": 461, + "n_pred": 522, + "n_ref": 484 + }, + "3": { + "Dice": 0.9899458623356535, + "FN": 6, + "FP": 7, + "IoU": 0.9800918836140888, + "TN": 5747, + "TP": 640, + "n_pred": 647, + "n_ref": 646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6911764705882353, + "FN": 166, + "FP": 2, + "IoU": 0.5280898876404494, + "TN": 6044, + "TP": 188, + "n_pred": 190, + "n_ref": 354 + }, + "2": { + "Dice": 0.8806366047745358, + "FN": 4, + "FP": 86, + "IoU": 0.7867298578199052, + "TN": 5978, + "TP": 332, + "n_pred": 418, + "n_ref": 336 + }, + "3": { + "Dice": 0.7692307692307693, + "FN": 1, + "FP": 2, + "IoU": 0.625, + "TN": 6392, + "TP": 5, + "n_pred": 7, + "n_ref": 6 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.407717510010921, + "FN": 93, + "FP": 1534, + "IoU": 0.25605852766346593, + "TN": 17013, + "TP": 560, + "n_pred": 2094, + "n_ref": 653 + }, + "2": { + "Dice": 0.8716411025256603, + "FN": 666, + "FP": 447, + "IoU": 0.7724856909239575, + "TN": 14308, + "TP": 3779, + "n_pred": 4226, + "n_ref": 4445 + }, + "3": { + "Dice": 0.756687898089172, + "FN": 210, + "FP": 172, + "IoU": 0.6086065573770492, + "TN": 18224, + "TP": 594, + "n_pred": 766, + "n_ref": 804 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.04408817635270541, + "FN": 111, + "FP": 366, + "IoU": 0.022540983606557378, + "TN": 25112, + "TP": 11, + "n_pred": 377, + "n_ref": 122 + }, + "2": { + "Dice": 0.8630393996247655, + "FN": 412, + "FP": 1048, + "IoU": 0.759075907590759, + "TN": 19540, + "TP": 4600, + "n_pred": 5648, + "n_ref": 5012 + }, + "3": { + "Dice": 0.43358129649309246, + "FN": 224, + "FP": 842, + "IoU": 0.276797829036635, + "TN": 24126, + "TP": 408, + "n_pred": 1250, + "n_ref": 632 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7604096869914808, + "FN": 246, + "FP": 2257, + "IoU": 0.6134362934362935, + "TN": 6325, + "TP": 3972, + "n_pred": 6229, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8731009830205541, + "FN": 102, + "FP": 182, + "IoU": 0.774781919111816, + "TN": 11539, + "TP": 977, + "n_pred": 1159, + "n_ref": 1079 + }, + "3": { + "Dice": 0.9102322661644695, + "FN": 126, + "FP": 17, + "IoU": 0.8352534562211982, + "TN": 11932, + "TP": 725, + "n_pred": 742, + "n_ref": 851 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1431, + "IoU": 0.0, + "TN": 4969, + "TP": 0, + "n_pred": 1431, + "n_ref": 0 + }, + "2": { + "Dice": 0.8486486486486486, + "FN": 96, + "FP": 16, + "IoU": 0.7370892018779343, + "TN": 5974, + "TP": 314, + "n_pred": 330, + "n_ref": 410 + }, + "3": { + "Dice": 0.9452247191011236, + "FN": 7, + "FP": 71, + "IoU": 0.8961384820239681, + "TN": 5649, + "TP": 673, + "n_pred": 744, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6533864541832669, + "FN": 3, + "FP": 171, + "IoU": 0.48520710059171596, + "TN": 6062, + "TP": 164, + "n_pred": 335, + "n_ref": 167 + }, + "2": { + "Dice": 0.4864864864864865, + "FN": 17, + "FP": 2, + "IoU": 0.32142857142857145, + "TN": 6372, + "TP": 9, + "n_pred": 11, + "n_ref": 26 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6565217391304348, + "FN": 4, + "FP": 628, + "IoU": 0.4886731391585761, + "TN": 5164, + "TP": 604, + "n_pred": 1232, + "n_ref": 608 + }, + "2": { + "Dice": 0.5518558951965066, + "FN": 1579, + "FP": 63, + "IoU": 0.38107802487749715, + "TN": 3747, + "TP": 1011, + "n_pred": 1074, + "n_ref": 2590 + }, + "3": { + "Dice": 0.6115269461077845, + "FN": 1021, + "FP": 17, + "IoU": 0.4404312668463612, + "TN": 4545, + "TP": 817, + "n_pred": 834, + "n_ref": 1838 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9697892866209697, + "FN": 55, + "FP": 64, + "IoU": 0.9413504189255791, + "TN": 4371, + "TP": 1910, + "n_pred": 1974, + "n_ref": 1965 + }, + "2": { + "Dice": 0.9013949013949014, + "FN": 80, + "FP": 125, + "IoU": 0.8204903677758318, + "TN": 5258, + "TP": 937, + "n_pred": 1062, + "n_ref": 1017 + }, + "3": { + "Dice": 0.981655290102389, + "FN": 70, + "FP": 16, + "IoU": 0.9639715123586091, + "TN": 4013, + "TP": 2301, + "n_pred": 2317, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9660493827160493, + "FN": 129, + "FP": 25, + "IoU": 0.9343283582089552, + "TN": 4055, + "TP": 2191, + "n_pred": 2216, + "n_ref": 2320 + }, + "2": { + "Dice": 0.8940493468795355, + "FN": 20, + "FP": 53, + "IoU": 0.8083989501312336, + "TN": 6019, + "TP": 308, + "n_pred": 361, + "n_ref": 328 + }, + "3": { + "Dice": 0.7142857142857143, + "FN": 31, + "FP": 1, + "IoU": 0.5555555555555556, + "TN": 6328, + "TP": 40, + "n_pred": 41, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.885670731707317, + "FN": 48, + "FP": 252, + "IoU": 0.7948016415868673, + "TN": 4938, + "TP": 1162, + "n_pred": 1414, + "n_ref": 1210 + }, + "2": { + "Dice": 0.9200251889168766, + "FN": 59, + "FP": 195, + "IoU": 0.8518950437317784, + "TN": 4685, + "TP": 1461, + "n_pred": 1656, + "n_ref": 1520 + }, + "3": { + "Dice": 0.9451184286539572, + "FN": 70, + "FP": 25, + "IoU": 0.895947426067908, + "TN": 5487, + "TP": 818, + "n_pred": 843, + "n_ref": 888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 539, + "IoU": 0.0, + "TN": 12261, + "TP": 0, + "n_pred": 539, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 1601, + "IoU": 0.0, + "TN": 11199, + "TP": 0, + "n_pred": 1601, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 5957, + "IoU": 0.0, + "TN": 6843, + "TP": 0, + "n_pred": 5957, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.6667186095969178, + "FN": 155.22222222222223, + "FP": 54.47619047619048, + "IoU": 0.5766179307633221, + "TN": 6335.841269841269, + "TP": 463.984126984127, + "n_pred": 518.4603174603175, + "n_ref": 619.2063492063493 + }, + "mean": { + "1": { + "Dice": 0.44260067611977, + "FN": 75.04761904761905, + "FP": 5.238095238095238, + "IoU": 0.36070732411146933, + "TN": 6844.9047619047615, + "TP": 84.33333333333333, + "n_pred": 89.57142857142857, + "n_ref": 159.38095238095238 + }, + "2": { + "Dice": 0.7147799781456591, + "FN": 126.38095238095238, + "FP": 67.0952380952381, + "IoU": 0.602303632309193, + "TN": 6550.142857142857, + "TP": 265.9047619047619, + "n_pred": 333.0, + "n_ref": 392.2857142857143 + }, + "3": { + "Dice": 0.8427751745253242, + "FN": 264.23809523809524, + "FP": 91.0952380952381, + "IoU": 0.766842835869304, + "TN": 5612.476190476191, + "TP": 1041.7142857142858, + "n_pred": 1132.8095238095239, + "n_ref": 1305.952380952381 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.810103579865528, + "FN": 361, + "FP": 684, + "IoU": 0.6808185705558949, + "TN": 9526, + "TP": 2229, + "n_pred": 2913, + "n_ref": 2590 + }, + "3": { + "Dice": 0.9694546262356992, + "FN": 248, + "FP": 302, + "IoU": 0.9407199827549041, + "TN": 3522, + "TP": 8728, + "n_pred": 9030, + "n_ref": 8976 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1945288753799392, + "FN": 530, + "FP": 0, + "IoU": 0.10774410774410774, + "TN": 12206, + "TP": 64, + "n_pred": 64, + "n_ref": 594 + }, + "2": { + "Dice": 0.5857795172863666, + "FN": 936, + "FP": 334, + "IoU": 0.41420664206642066, + "TN": 10632, + "TP": 898, + "n_pred": 1232, + "n_ref": 1834 + }, + "3": { + "Dice": 0.7780502759043532, + "FN": 2911, + "FP": 709, + "IoU": 0.6367285499247366, + "TN": 2835, + "TP": 6345, + "n_pred": 7054, + "n_ref": 9256 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0970873786407767, + "FN": 465, + "FP": 0, + "IoU": 0.05102040816326531, + "TN": 5910, + "TP": 25, + "n_pred": 25, + "n_ref": 490 + }, + "2": { + "Dice": 0.24055781522370714, + "FN": 1105, + "FP": 202, + "IoU": 0.13672391017173052, + "TN": 4886, + "TP": 207, + "n_pred": 409, + "n_ref": 1312 + }, + "3": { + "Dice": 0.5101292072100814, + "FN": 2285, + "FP": 786, + "IoU": 0.3423982869379015, + "TN": 1730, + "TP": 1599, + "n_pred": 2385, + "n_ref": 3884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8473520249221184, + "FN": 4, + "FP": 45, + "IoU": 0.7351351351351352, + "TN": 6215, + "TP": 136, + "n_pred": 181, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6557377049180327, + "FN": 4, + "FP": 17, + "IoU": 0.4878048780487805, + "TN": 6359, + "TP": 20, + "n_pred": 37, + "n_ref": 24 + }, + "2": { + "Dice": 0.9310551558752997, + "FN": 135, + "FP": 95, + "IoU": 0.8710039259674706, + "TN": 4617, + "TP": 1553, + "n_pred": 1648, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9797580006785027, + "FN": 76, + "FP": 103, + "IoU": 0.9603192196852139, + "TN": 1889, + "TP": 4332, + "n_pred": 4435, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7539353769676885, + "FN": 565, + "FP": 29, + "IoU": 0.6050531914893617, + "TN": 4896, + "TP": 910, + "n_pred": 939, + "n_ref": 1475 + }, + "2": { + "Dice": 0.8738317757009346, + "FN": 113, + "FP": 49, + "IoU": 0.7759336099585062, + "TN": 5677, + "TP": 561, + "n_pred": 610, + "n_ref": 674 + }, + "3": { + "Dice": 0.9764837625979843, + "FN": 29, + "FP": 13, + "IoU": 0.9540481400437637, + "TN": 5486, + "TP": 872, + "n_pred": 885, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 6396, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9543147208121827, + "FN": 12, + "FP": 60, + "IoU": 0.912621359223301, + "TN": 5576, + "TP": 752, + "n_pred": 812, + "n_ref": 764 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8397923119698004, + "FN": 179.28333333333333, + "FP": 162.86666666666667, + "IoU": 0.7406120941184996, + "TN": 7266.900000000001, + "TP": 1030.95, + "n_pred": 1193.8166666666666, + "n_ref": 1210.2333333333333 + }, + "mean": { + "1": { + "Dice": 0.7792235364975836, + "FN": 199.25, + "FP": 94.7, + "IoU": 0.6582434825559882, + "TN": 7572.0, + "TP": 774.05, + "n_pred": 868.75, + "n_ref": 973.3 + }, + "2": { + "Dice": 0.8451693920117169, + "FN": 222.9, + "FP": 142.55, + "IoU": 0.7384192777241384, + "TN": 7274.95, + "TP": 999.6, + "n_pred": 1142.15, + "n_ref": 1222.5 + }, + "3": { + "Dice": 0.894984007400101, + "FN": 115.7, + "FP": 251.35, + "IoU": 0.8251735220753723, + "TN": 6953.75, + "TP": 1319.2, + "n_pred": 1570.55, + "n_ref": 1434.9 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7158948685857321, + "FN": 62, + "FP": 392, + "IoU": 0.557504873294347, + "TN": 5374, + "TP": 572, + "n_pred": 964, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6782285537318055, + "FN": 1976, + "FP": 102, + "IoU": 0.5131208997188379, + "TN": 21332, + "TP": 2190, + "n_pred": 2292, + "n_ref": 4166 + }, + "2": { + "Dice": 0.7174869109947644, + "FN": 453, + "FP": 896, + "IoU": 0.5594382756368387, + "TN": 22538, + "TP": 1713, + "n_pred": 2609, + "n_ref": 2166 + }, + "3": { + "Dice": 0.8580838903419549, + "FN": 186, + "FP": 2744, + "IoU": 0.7514421445537836, + "TN": 13812, + "TP": 8858, + "n_pred": 11602, + "n_ref": 9044 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9748502994011976, + "FN": 142, + "FP": 26, + "IoU": 0.9509345794392523, + "TN": 9376, + "TP": 3256, + "n_pred": 3282, + "n_ref": 3398 + }, + "2": { + "Dice": 0.7986006996501749, + "FN": 508, + "FP": 298, + "IoU": 0.6647254575707154, + "TN": 10396, + "TP": 1598, + "n_pred": 1896, + "n_ref": 2106 + }, + "3": { + "Dice": 0.958121684162998, + "FN": 316, + "FP": 55, + "IoU": 0.9196099674972914, + "TN": 8185, + "TP": 4244, + "n_pred": 4299, + "n_ref": 4560 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7910787437414656, + "FN": 244, + "FP": 215, + "IoU": 0.6543674698795181, + "TN": 5072, + "TP": 869, + "n_pred": 1084, + "n_ref": 1113 + }, + "3": { + "Dice": 0.9603911980440097, + "FN": 0, + "FP": 243, + "IoU": 0.9238005644402634, + "TN": 3211, + "TP": 2946, + "n_pred": 3189, + "n_ref": 2946 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8404286128004633, + "FN": 67, + "FP": 484, + "IoU": 0.7247752247752248, + "TN": 4398, + "TP": 1451, + "n_pred": 1935, + "n_ref": 1518 + }, + "2": { + "Dice": 0.9278350515463918, + "FN": 68, + "FP": 51, + "IoU": 0.8653846153846154, + "TN": 5516, + "TP": 765, + "n_pred": 816, + "n_ref": 833 + }, + "3": { + "Dice": 0.9037433155080213, + "FN": 0, + "FP": 36, + "IoU": 0.824390243902439, + "TN": 6195, + "TP": 169, + "n_pred": 205, + "n_ref": 169 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7660723933009185, + "FN": 347, + "FP": 86, + "IoU": 0.6208406304728546, + "TN": 18058, + "TP": 709, + "n_pred": 795, + "n_ref": 1056 + }, + "2": { + "Dice": 0.8747119019083618, + "FN": 2044, + "FP": 674, + "IoU": 0.7773226282156317, + "TN": 6994, + "TP": 9488, + "n_pred": 10162, + "n_ref": 11532 + }, + "3": { + "Dice": 0.61865189289012, + "FN": 879, + "FP": 1186, + "IoU": 0.44786096256684493, + "TN": 15460, + "TP": 1675, + "n_pred": 2861, + "n_ref": 2554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5025960539979232, + "FN": 456, + "FP": 23, + "IoU": 0.3356449375866852, + "TN": 5679, + "TP": 242, + "n_pred": 265, + "n_ref": 698 + }, + "2": { + "Dice": 0.8610354223433242, + "FN": 401, + "FP": 58, + "IoU": 0.7559808612440191, + "TN": 4519, + "TP": 1422, + "n_pred": 1480, + "n_ref": 1823 + }, + "3": { + "Dice": 0.9632495164410058, + "FN": 51, + "FP": 6, + "IoU": 0.9291044776119403, + "TN": 5596, + "TP": 747, + "n_pred": 753, + "n_ref": 798 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8661735036987223, + "FN": 174, + "FP": 25, + "IoU": 0.763938315539739, + "TN": 5557, + "TP": 644, + "n_pred": 669, + "n_ref": 818 + }, + "2": { + "Dice": 0.9067201604814443, + "FN": 103, + "FP": 83, + "IoU": 0.8293577981651377, + "TN": 5310, + "TP": 904, + "n_pred": 987, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9636672325976231, + "FN": 18, + "FP": 89, + "IoU": 0.9298820445609436, + "TN": 4874, + "TP": 1419, + "n_pred": 1508, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9020674646354734, + "FN": 140, + "FP": 40, + "IoU": 0.821605550049554, + "TN": 5391, + "TP": 829, + "n_pred": 869, + "n_ref": 969 + }, + "3": { + "Dice": 0.9763378230797234, + "FN": 24, + "FP": 41, + "IoU": 0.9537695590327169, + "TN": 4994, + "TP": 1341, + "n_pred": 1382, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6982024597918638, + "FN": 616, + "FP": 22, + "IoU": 0.5363372093023255, + "TN": 11424, + "TP": 738, + "n_pred": 760, + "n_ref": 1354 + }, + "2": { + "Dice": 0.7974917004795279, + "FN": 365, + "FP": 184, + "IoU": 0.6631901840490797, + "TN": 11170, + "TP": 1081, + "n_pred": 1265, + "n_ref": 1446 + }, + "3": { + "Dice": 0.9009370816599732, + "FN": 635, + "FP": 105, + "IoU": 0.8197320341047503, + "TN": 8695, + "TP": 3365, + "n_pred": 3470, + "n_ref": 4000 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7825415218230978, + "FN": 133, + "FP": 430, + "IoU": 0.6427664974619289, + "TN": 4824, + "TP": 1013, + "n_pred": 1443, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7684674751929438, + "FN": 94, + "FP": 326, + "IoU": 0.6239928379588182, + "TN": 5283, + "TP": 697, + "n_pred": 1023, + "n_ref": 791 + }, + "3": { + "Dice": 0.7592529711375212, + "FN": 191, + "FP": 518, + "IoU": 0.6119321291735085, + "TN": 4573, + "TP": 1118, + "n_pred": 1636, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9672470978441128, + "FN": 12, + "FP": 304, + "IoU": 0.9365716579686872, + "TN": 1418, + "TP": 4666, + "n_pred": 4970, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9513677811550152, + "FN": 38, + "FP": 26, + "IoU": 0.9072463768115943, + "TN": 5710, + "TP": 626, + "n_pred": 652, + "n_ref": 664 + }, + "3": { + "Dice": 0.9823874755381604, + "FN": 14, + "FP": 4, + "IoU": 0.9653846153846154, + "TN": 5880, + "TP": 502, + "n_pred": 506, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905613/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.7568248686197138, + "FN": 158.83761904761906, + "FP": 143.76380952380953, + "IoU": 0.6707330442535141, + "TN": 7185.653015873015, + "TP": 822.6026984126984, + "n_pred": 966.366507936508, + "n_ref": 981.4403174603174 + }, + "mean": { + "1": { + "Dice": 0.6203630609004305, + "FN": 222.63095238095238, + "FP": 157.0257142857143, + "IoU": 0.5350939791288476, + "TN": 7004.1523809523815, + "TP": 927.0480952380952, + "n_pred": 1084.0738095238096, + "n_ref": 1149.6790476190477 + }, + "2": { + "Dice": 0.7938388015578509, + "FN": 141.1704761904762, + "FP": 117.03380952380954, + "IoU": 0.6918180896872075, + "TN": 7397.723333333332, + "TP": 654.9295238095239, + "n_pred": 771.9633333333334, + "n_ref": 796.1 + }, + "3": { + "Dice": 0.8562727434008603, + "FN": 112.71142857142857, + "FP": 157.2319047619048, + "IoU": 0.7852870639444872, + "TN": 7155.083333333333, + "TP": 885.8304761904762, + "n_pred": 1043.0623809523809, + "n_ref": 998.5419047619049 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_002/summary.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_002/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..b2fd97f1c7f384f57bb67d0607a81ca423edef63 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_002/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8692972346052442, + "FN": 1297.7866666666666, + "FP": 939.2266666666668, + "IoU": 0.7777448589352636, + "TN": 843295.2999999999, + "TP": 8896.326666666668, + "n_pred": 9835.553333333333, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8337226870016596, + "FN": 1815.34, + "FP": 918.0, + "IoU": 0.7228102995413341, + "TN": 843656.58, + "TP": 8038.72, + "n_pred": 8956.72, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8464300894614267, + "FN": 1465.34, + "FP": 1320.26, + "IoU": 0.7393604968026348, + "TN": 843052.88, + "TP": 8590.16, + "n_pred": 9910.42, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9277389273526464, + "FN": 612.68, + "FP": 579.42, + "IoU": 0.8710637804618218, + "TN": 843176.44, + "TP": 10060.1, + "n_pred": 10639.52, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9205975870029183, + "FN": 878, + "FP": 945, + "IoU": 0.8528770882091841, + "TN": 1093529, + "TP": 10568, + "n_pred": 11513, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8601994685440176, + "FN": 993, + "FP": 3058, + "IoU": 0.7546929877679545, + "TN": 1089406, + "TP": 12463, + "n_pred": 15521, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9418541419105355, + "FN": 826, + "FP": 2061, + "IoU": 0.8900985953024477, + "TN": 1079651, + "TP": 23382, + "n_pred": 25443, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8652779041208042, + "FN": 122, + "FP": 1359, + "IoU": 0.7625460958794292, + "TN": 1099683, + "TP": 4756, + "n_pred": 6115, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8716546945521582, + "FN": 2268, + "FP": 1770, + "IoU": 0.7725070422535212, + "TN": 1088170, + "TP": 13712, + "n_pred": 15482, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9436416955478539, + "FN": 784, + "FP": 1330, + "IoU": 0.8932969917221886, + "TN": 1086108, + "TP": 17698, + "n_pred": 19028, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.819090615930345, + "FN": 2520, + "FP": 285, + "IoU": 0.693610049153468, + "TN": 900285, + "TP": 6350, + "n_pred": 6635, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8863891172733388, + "FN": 1927, + "FP": 1113, + "IoU": 0.7959594603664676, + "TN": 894541, + "TP": 11859, + "n_pred": 12972, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9685842897881266, + "FN": 863, + "FP": 470, + "IoU": 0.9390823507906042, + "TN": 887558, + "TP": 20549, + "n_pred": 21019, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7235657546337158, + "FN": 2879, + "FP": 253, + "IoU": 0.5668648872908312, + "TN": 902209, + "TP": 4099, + "n_pred": 4352, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8816555445122817, + "FN": 1905, + "FP": 1429, + "IoU": 0.7883577731225798, + "TN": 893687, + "TP": 12419, + "n_pred": 13848, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9677349089225911, + "FN": 863, + "FP": 322, + "IoU": 0.937486811563621, + "TN": 890484, + "TP": 17771, + "n_pred": 18093, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9268592231945084, + "FN": 3047, + "FP": 288, + "IoU": 0.8636883838796697, + "TN": 1401294, + "TP": 21131, + "n_pred": 21419, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8708757904393696, + "FN": 1794, + "FP": 2147, + "IoU": 0.7712843131565202, + "TN": 1408529, + "TP": 13290, + "n_pred": 15437, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9633308633568982, + "FN": 1225, + "FP": 606, + "IoU": 0.9292558534889113, + "TN": 1399878, + "TP": 24051, + "n_pred": 24657, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9195507416192735, + "FN": 1462, + "FP": 1353, + "IoU": 0.8510818388615564, + "TN": 1406857, + "TP": 16088, + "n_pred": 17441, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8647652308886302, + "FN": 1697, + "FP": 2485, + "IoU": 0.7617501281832165, + "TN": 1408207, + "TP": 13371, + "n_pred": 15856, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9586999461303645, + "FN": 1344, + "FP": 496, + "IoU": 0.9206759786170029, + "TN": 1402564, + "TP": 21356, + "n_pred": 21852, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7608851752725374, + "FN": 3430, + "FP": 233, + "IoU": 0.6140554209250869, + "TN": 752557, + "TP": 5828, + "n_pred": 6061, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8675018579467034, + "FN": 1239, + "FP": 1257, + "IoU": 0.7660073122714915, + "TN": 751381, + "TP": 8171, + "n_pred": 9428, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9686967497633323, + "FN": 667, + "FP": 325, + "IoU": 0.9392938008689798, + "TN": 745707, + "TP": 15349, + "n_pred": 15674, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.807683615819209, + "FN": 1344, + "FP": 358, + "IoU": 0.6774071266110689, + "TN": 756772, + "TP": 3574, + "n_pred": 3932, + "n_ref": 4918 + }, + "2": { + "Dice": 0.7855577784128799, + "FN": 2992, + "FP": 1510, + "IoU": 0.6468465641669281, + "TN": 749300, + "TP": 8246, + "n_pred": 9756, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9330117899249732, + "FN": 1466, + "FP": 34, + "IoU": 0.8744349573078855, + "TN": 750102, + "TP": 10446, + "n_pred": 10480, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8091513163428379, + "FN": 4224, + "FP": 314, + "IoU": 0.679474502048312, + "TN": 1064114, + "TP": 9620, + "n_pred": 9934, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8602129041931131, + "FN": 1264, + "FP": 1533, + "IoU": 0.7547136718407437, + "TN": 1066869, + "TP": 8606, + "n_pred": 10139, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9581731983056078, + "FN": 1326, + "FP": 165, + "IoU": 0.9197048844848942, + "TN": 1059703, + "TP": 17078, + "n_pred": 17243, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7662573897226012, + "FN": 4871, + "FP": 269, + "IoU": 0.6210836712126797, + "TN": 1064707, + "TP": 8425, + "n_pred": 8694, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8384964110313563, + "FN": 1922, + "FP": 1498, + "IoU": 0.7219060009757684, + "TN": 1065974, + "TP": 8878, + "n_pred": 10376, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9351601301592738, + "FN": 1575, + "FP": 318, + "IoU": 0.8782166752444673, + "TN": 1062728, + "TP": 13651, + "n_pred": 13969, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.857682006330655, + "FN": 2087, + "FP": 251, + "IoU": 0.7508259618458915, + "TN": 1096537, + "TP": 7045, + "n_pred": 7296, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8429512407307677, + "FN": 1308, + "FP": 2483, + "IoU": 0.7285356247762262, + "TN": 1091955, + "TP": 10174, + "n_pred": 12657, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8969300110553619, + "FN": 949, + "FP": 1475, + "IoU": 0.813121578906792, + "TN": 1092949, + "TP": 10547, + "n_pred": 12022, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8436877377286723, + "FN": 723, + "FP": 140, + "IoU": 0.7296365914786967, + "TN": 1102728, + "TP": 2329, + "n_pred": 2469, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8630193958183674, + "FN": 939, + "FP": 2684, + "IoU": 0.7590449587656292, + "TN": 1090884, + "TP": 11413, + "n_pred": 14097, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7912294861447404, + "FN": 339, + "FP": 1213, + "IoU": 0.6545737814377921, + "TN": 1101427, + "TP": 2941, + "n_pred": 4154, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8466007786762504, + "FN": 2097, + "FP": 464, + "IoU": 0.7340049854590777, + "TN": 1137252, + "TP": 7067, + "n_pred": 7531, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9161950817985389, + "FN": 1607, + "FP": 1651, + "IoU": 0.8453505482508188, + "TN": 1125813, + "TP": 17809, + "n_pred": 19460, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9402574732707834, + "FN": 1157, + "FP": 212, + "IoU": 0.8872508647669247, + "TN": 1134738, + "TP": 10773, + "n_pred": 10985, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6595744680851063, + "FN": 916, + "FP": 684, + "IoU": 0.49206349206349204, + "TN": 1143730, + "TP": 1550, + "n_pred": 2234, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8266684119815869, + "FN": 5490, + "FP": 2455, + "IoU": 0.7045479900338403, + "TN": 1119989, + "TP": 18946, + "n_pred": 21401, + "n_ref": 24436 + }, + "3": { + "Dice": 0.5394750280870186, + "FN": 75, + "FP": 4434, + "IoU": 0.36937062937062937, + "TN": 1139730, + "TP": 2641, + "n_pred": 7075, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9483840263055423, + "FN": 886, + "FP": 307, + "IoU": 0.9018349378754217, + "TN": 788647, + "TP": 10960, + "n_pred": 11267, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8679354094579008, + "FN": 1109, + "FP": 1181, + "IoU": 0.7666836474783495, + "TN": 790985, + "TP": 7525, + "n_pred": 8706, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9523017523017523, + "FN": 637, + "FP": 166, + "IoU": 0.9089465925841932, + "TN": 791981, + "TP": 8016, + "n_pred": 8182, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7398641244795091, + "FN": 563, + "FP": 1811, + "IoU": 0.5871304347826087, + "TN": 795050, + "TP": 3376, + "n_pred": 5187, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8980030594947699, + "FN": 1792, + "FP": 675, + "IoU": 0.8148870713588955, + "TN": 787473, + "TP": 10860, + "n_pred": 11535, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8936742934051144, + "FN": 190, + "FP": 442, + "IoU": 0.8077858880778589, + "TN": 797512, + "TP": 2656, + "n_pred": 3098, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.934319060820755, + "FN": 543, + "FP": 1376, + "IoU": 0.8767343268242549, + "TN": 1332272, + "TP": 13649, + "n_pred": 15025, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8802044609665427, + "FN": 1135, + "FP": 1443, + "IoU": 0.786040335297535, + "TN": 1335791, + "TP": 9471, + "n_pred": 10914, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9719642493231244, + "FN": 635, + "FP": 328, + "IoU": 0.9454576347983689, + "TN": 1330184, + "TP": 16693, + "n_pred": 17021, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7646510293379241, + "FN": 538, + "FP": 2743, + "IoU": 0.6189757287190802, + "TN": 1339229, + "TP": 5330, + "n_pred": 8073, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8587106773342269, + "FN": 1864, + "FP": 1509, + "IoU": 0.7524040226088233, + "TN": 1334217, + "TP": 10250, + "n_pred": 11759, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9471052631578948, + "FN": 821, + "FP": 385, + "IoU": 0.8995251187203199, + "TN": 1335837, + "TP": 10797, + "n_pred": 11182, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8426222189150978, + "FN": 1138, + "FP": 3092, + "IoU": 0.7280442329947281, + "TN": 836414, + "TP": 11324, + "n_pred": 14416, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8545149651913208, + "FN": 1040, + "FP": 1823, + "IoU": 0.7459852719368291, + "TN": 840697, + "TP": 8408, + "n_pred": 10231, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9684135354867062, + "FN": 859, + "FP": 291, + "IoU": 0.9387613823952287, + "TN": 833189, + "TP": 17629, + "n_pred": 17920, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8986506306834849, + "FN": 811, + "FP": 571, + "IoU": 0.8159541883073645, + "TN": 844459, + "TP": 6127, + "n_pred": 6698, + "n_ref": 6938 + }, + "2": { + "Dice": 0.863799928031666, + "FN": 1690, + "FP": 1338, + "IoU": 0.7602533650039588, + "TN": 839338, + "TP": 9602, + "n_pred": 10940, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9583643997959423, + "FN": 785, + "FP": 276, + "IoU": 0.9200572634116938, + "TN": 838696, + "TP": 12211, + "n_pred": 12487, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7041595925297114, + "FN": 2538, + "FP": 250, + "IoU": 0.5433999344906649, + "TN": 845862, + "TP": 3318, + "n_pred": 3568, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8531281673270064, + "FN": 1461, + "FP": 1727, + "IoU": 0.7438740258696874, + "TN": 839521, + "TP": 9259, + "n_pred": 10986, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9344671109112465, + "FN": 1527, + "FP": 76, + "IoU": 0.8769950890116636, + "TN": 838936, + "TP": 11429, + "n_pred": 11505, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.875765743690272, + "FN": 317, + "FP": 190, + "IoU": 0.7789886660854403, + "TN": 849674, + "TP": 1787, + "n_pred": 1977, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8889873162874975, + "FN": 1547, + "FP": 1210, + "IoU": 0.8001594665120325, + "TN": 838172, + "TP": 11039, + "n_pred": 12249, + "n_ref": 12586 + }, + "3": { + "Dice": 0.945588829265478, + "FN": 552, + "FP": 391, + "IoU": 0.8967932581810222, + "TN": 842831, + "TP": 8194, + "n_pred": 8585, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8328537576167908, + "FN": 3247, + "FP": 703, + "IoU": 0.7135813211514755, + "TN": 783249, + "TP": 9841, + "n_pred": 10544, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8101006837882948, + "FN": 1331, + "FP": 2196, + "IoU": 0.680814479638009, + "TN": 785990, + "TP": 7523, + "n_pred": 9719, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9435873819940134, + "FN": 1164, + "FP": 306, + "IoU": 0.8931996512641673, + "TN": 783276, + "TP": 12294, + "n_pred": 12600, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8209366391184573, + "FN": 1708, + "FP": 892, + "IoU": 0.6962616822429907, + "TN": 788480, + "TP": 5960, + "n_pred": 6852, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8541677197593893, + "FN": 1173, + "FP": 1712, + "IoU": 0.7454561496382566, + "TN": 785706, + "TP": 8449, + "n_pred": 10161, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9394162652309436, + "FN": 744, + "FP": 325, + "IoU": 0.8857539809768088, + "TN": 787683, + "TP": 8288, + "n_pred": 8613, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7983831125084213, + "FN": 3580, + "FP": 909, + "IoU": 0.6644240113627868, + "TN": 883293, + "TP": 8888, + "n_pred": 9797, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8665870551707666, + "FN": 1267, + "FP": 1526, + "IoU": 0.7645819285232637, + "TN": 884806, + "TP": 9071, + "n_pred": 10597, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9475463917525773, + "FN": 763, + "FP": 509, + "IoU": 0.9003212914348405, + "TN": 883909, + "TP": 11489, + "n_pred": 11998, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7920060458476782, + "FN": 1640, + "FP": 837, + "IoU": 0.6556374252745725, + "TN": 889477, + "TP": 4716, + "n_pred": 5553, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8899804390349924, + "FN": 1281, + "FP": 1250, + "IoU": 0.8017700501253133, + "TN": 883902, + "TP": 10237, + "n_pred": 11487, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9216364503816794, + "FN": 1099, + "FP": 215, + "IoU": 0.8546620949010065, + "TN": 887629, + "TP": 7727, + "n_pred": 7942, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9340524860626388, + "FN": 916, + "FP": 539, + "IoU": 0.8762649885194319, + "TN": 750289, + "TP": 10304, + "n_pred": 10843, + "n_ref": 11220 + }, + "2": { + "Dice": 0.911960542540074, + "FN": 1167, + "FP": 618, + "IoU": 0.8381686310063463, + "TN": 751018, + "TP": 9245, + "n_pred": 9863, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9705105258672121, + "FN": 365, + "FP": 327, + "IoU": 0.9427104892789138, + "TN": 749969, + "TP": 11387, + "n_pred": 11714, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8765477503984308, + "FN": 217, + "FP": 790, + "IoU": 0.7802269751200349, + "TN": 757466, + "TP": 3575, + "n_pred": 4365, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8804431035259153, + "FN": 1856, + "FP": 799, + "IoU": 0.7864210441637841, + "TN": 749617, + "TP": 9776, + "n_pred": 10575, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9439510411224719, + "FN": 510, + "FP": 241, + "IoU": 0.8938515901060071, + "TN": 754973, + "TP": 6324, + "n_pred": 6565, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8237116154873164, + "FN": 230, + "FP": 3071, + "IoU": 0.7002633251611732, + "TN": 984315, + "TP": 7712, + "n_pred": 10783, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8300021491510853, + "FN": 1024, + "FP": 2140, + "IoU": 0.7094048493754592, + "TN": 984440, + "TP": 7724, + "n_pred": 9864, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9696719376917631, + "FN": 112, + "FP": 916, + "IoU": 0.9411293093574619, + "TN": 977866, + "TP": 16434, + "n_pred": 17350, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7312998354638653, + "FN": 353, + "FP": 1770, + "IoU": 0.5764166001596169, + "TN": 990316, + "TP": 2889, + "n_pred": 4659, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8236708376591443, + "FN": 797, + "FP": 2430, + "IoU": 0.7002043849869937, + "TN": 984564, + "TP": 7537, + "n_pred": 9967, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9383491010178003, + "FN": 150, + "FP": 1225, + "IoU": 0.8838584339893573, + "TN": 983489, + "TP": 10464, + "n_pred": 11689, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9481608334225267, + "FN": 1036, + "FP": 417, + "IoU": 0.9014313818601181, + "TN": 743275, + "TP": 13288, + "n_pred": 13705, + "n_ref": 14324 + }, + "2": { + "Dice": 0.905658224960073, + "FN": 873, + "FP": 781, + "IoU": 0.8275826123214844, + "TN": 748423, + "TP": 7939, + "n_pred": 8720, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9766685706753372, + "FN": 188, + "FP": 343, + "IoU": 0.9544010304851868, + "TN": 746371, + "TP": 11114, + "n_pred": 11457, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7692173913043479, + "FN": 813, + "FP": 1841, + "IoU": 0.6249823371485093, + "TN": 750939, + "TP": 4423, + "n_pred": 6264, + "n_ref": 5236 + }, + "2": { + "Dice": 0.9075990775996139, + "FN": 870, + "FP": 853, + "IoU": 0.8308296514482082, + "TN": 747831, + "TP": 8462, + "n_pred": 9315, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9157740993184031, + "FN": 430, + "FP": 262, + "IoU": 0.8446340368208352, + "TN": 753562, + "TP": 3762, + "n_pred": 4024, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9248807631160573, + "FN": 965, + "FP": 169, + "IoU": 0.8602587800369685, + "TN": 630861, + "TP": 6981, + "n_pred": 7150, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8747834017327861, + "FN": 570, + "FP": 803, + "IoU": 0.7774355649213811, + "TN": 632807, + "TP": 4796, + "n_pred": 5599, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9556304408873911, + "FN": 528, + "FP": 104, + "IoU": 0.9150309222909384, + "TN": 631538, + "TP": 6806, + "n_pred": 6910, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.771404109589041, + "FN": 317, + "FP": 1285, + "IoU": 0.6278745644599303, + "TN": 634671, + "TP": 2703, + "n_pred": 3988, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9209768143778296, + "FN": 639, + "FP": 513, + "IoU": 0.8535282898919263, + "TN": 631111, + "TP": 6713, + "n_pred": 7226, + "n_ref": 7352 + }, + "3": { + "Dice": 0.922056979036015, + "FN": 183, + "FP": 252, + "IoU": 0.8553856382978723, + "TN": 635968, + "TP": 2573, + "n_pred": 2825, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9261444557477111, + "FN": 1784, + "FP": 394, + "IoU": 0.8624478969306556, + "TN": 967206, + "TP": 13656, + "n_pred": 14050, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8614976154186538, + "FN": 1135, + "FP": 1682, + "IoU": 0.756693729486958, + "TN": 971462, + "TP": 8761, + "n_pred": 10443, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9718926134678137, + "FN": 113, + "FP": 645, + "IoU": 0.9453220803577869, + "TN": 969177, + "TP": 13105, + "n_pred": 13750, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9173080072048468, + "FN": 586, + "FP": 424, + "IoU": 0.8472474289171203, + "TN": 976428, + "TP": 5602, + "n_pred": 6026, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9205080200374437, + "FN": 860, + "FP": 711, + "IoU": 0.8527233523952377, + "TN": 972373, + "TP": 9096, + "n_pred": 9807, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9360252979810265, + "FN": 218, + "FP": 571, + "IoU": 0.8797439414723366, + "TN": 976479, + "TP": 5772, + "n_pred": 6343, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9474374590087136, + "FN": 1012, + "FP": 671, + "IoU": 0.9001246216841731, + "TN": 1031725, + "TP": 15168, + "n_pred": 15839, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8922032389114586, + "FN": 692, + "FP": 1245, + "IoU": 0.8053853109615191, + "TN": 1038623, + "TP": 8016, + "n_pred": 9261, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9685437209681362, + "FN": 375, + "FP": 397, + "IoU": 0.9390060835901083, + "TN": 1035919, + "TP": 11885, + "n_pred": 12282, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8876287685473963, + "FN": 734, + "FP": 455, + "IoU": 0.7979609175870858, + "TN": 1042691, + "TP": 4696, + "n_pred": 5151, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8723778862115801, + "FN": 1651, + "FP": 886, + "IoU": 0.7736438258386866, + "TN": 1037368, + "TP": 8671, + "n_pred": 9557, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9376192867905575, + "FN": 413, + "FP": 208, + "IoU": 0.8825642965204236, + "TN": 1043288, + "TP": 4667, + "n_pred": 4875, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7851182567100717, + "FN": 3776, + "FP": 267, + "IoU": 0.6462507655962901, + "TN": 477787, + "TP": 7386, + "n_pred": 7653, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7875170532060027, + "FN": 408, + "FP": 838, + "IoU": 0.6495077355836849, + "TN": 485661, + "TP": 2309, + "n_pred": 3147, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9560080177233885, + "FN": 120, + "FP": 297, + "IoU": 0.9157235246564268, + "TN": 484268, + "TP": 4531, + "n_pred": 4828, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.854466976138122, + "FN": 1405, + "FP": 382, + "IoU": 0.7459121285368975, + "TN": 482183, + "TP": 5246, + "n_pred": 5628, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8442724458204335, + "FN": 633, + "FP": 373, + "IoU": 0.7305116528261452, + "TN": 485483, + "TP": 2727, + "n_pred": 3100, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8594876896294454, + "FN": 62, + "FP": 503, + "IoU": 0.7535979066724815, + "TN": 486923, + "TP": 1728, + "n_pred": 2231, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9179047131147541, + "FN": 1542, + "FP": 1022, + "IoU": 0.8482660669901764, + "TN": 463582, + "TP": 14334, + "n_pred": 15356, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8137961143855054, + "FN": 791, + "FP": 915, + "IoU": 0.6860507913139492, + "TN": 475046, + "TP": 3728, + "n_pred": 4643, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9497318555595281, + "FN": 319, + "FP": 384, + "IoU": 0.9042755991285403, + "TN": 473136, + "TP": 6641, + "n_pred": 7025, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9006754612629766, + "FN": 1677, + "FP": 514, + "IoU": 0.8192989690721649, + "TN": 468355, + "TP": 9934, + "n_pred": 10448, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8103448275862069, + "FN": 1573, + "FP": 341, + "IoU": 0.6811594202898551, + "TN": 474477, + "TP": 4089, + "n_pred": 4430, + "n_ref": 5662 + }, + "3": { + "Dice": 0.879234884097909, + "FN": 94, + "FP": 651, + "IoU": 0.784495227075499, + "TN": 477023, + "TP": 2712, + "n_pred": 3363, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7996892622856485, + "FN": 6775, + "FP": 187, + "IoU": 0.6662351982357735, + "TN": 623781, + "TP": 13897, + "n_pred": 14084, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7793966989186113, + "FN": 2219, + "FP": 1657, + "IoU": 0.6385339923528863, + "TN": 633917, + "TP": 6847, + "n_pred": 8504, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9362008254136533, + "FN": 1635, + "FP": 50, + "IoU": 0.8800541002277904, + "TN": 630592, + "TP": 12363, + "n_pred": 12413, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.782985976601844, + "FN": 5226, + "FP": 376, + "IoU": 0.6433664374840845, + "TN": 628932, + "TP": 10106, + "n_pred": 10482, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8477896168669236, + "FN": 2817, + "FP": 540, + "IoU": 0.7357941130174721, + "TN": 631934, + "TP": 9349, + "n_pred": 9889, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9336457984599933, + "FN": 590, + "FP": 401, + "IoU": 0.8755494160492276, + "TN": 636677, + "TP": 6972, + "n_pred": 7373, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.884847091285353, + "FN": 2811, + "FP": 2197, + "IoU": 0.7934760196296754, + "TN": 540231, + "TP": 19241, + "n_pred": 21438, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7621404997642621, + "FN": 1236, + "FP": 782, + "IoU": 0.6156922490954104, + "TN": 559229, + "TP": 3233, + "n_pred": 4015, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9564777967279389, + "FN": 326, + "FP": 363, + "IoU": 0.9165859564164649, + "TN": 556220, + "TP": 7571, + "n_pred": 7934, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.712600562657322, + "FN": 1213, + "FP": 4610, + "IoU": 0.5535193988652047, + "TN": 551438, + "TP": 7219, + "n_pred": 11829, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8594118909637262, + "FN": 859, + "FP": 451, + "IoU": 0.7534813699661272, + "TN": 559166, + "TP": 4004, + "n_pred": 4455, + "n_ref": 4863 + }, + "3": { + "Dice": 0.9380123687616856, + "FN": 191, + "FP": 240, + "IoU": 0.883261105092091, + "TN": 560788, + "TP": 3261, + "n_pred": 3501, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6445530726256983, + "FN": 3883, + "FP": 189, + "IoU": 0.4755280783101494, + "TN": 411116, + "TP": 3692, + "n_pred": 3881, + "n_ref": 7575 + }, + "2": { + "Dice": 0.5680772769089236, + "FN": 1621, + "FP": 257, + "IoU": 0.39672341792483135, + "TN": 415767, + "TP": 1235, + "n_pred": 1492, + "n_ref": 2856 + }, + "3": { + "Dice": 0.9001102535832415, + "FN": 117, + "FP": 789, + "IoU": 0.818364073777065, + "TN": 413892, + "TP": 4082, + "n_pred": 4871, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7032896838070903, + "FN": 1434, + "FP": 1353, + "IoU": 0.5423645320197045, + "TN": 412790, + "TP": 3303, + "n_pred": 4656, + "n_ref": 4737 + }, + "2": { + "Dice": 0.5260428941786471, + "FN": 1877, + "FP": 134, + "IoU": 0.356891589382795, + "TN": 415753, + "TP": 1116, + "n_pred": 1250, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8778335005015045, + "FN": 195, + "FP": 414, + "IoU": 0.7822667143367894, + "TN": 416083, + "TP": 2188, + "n_pred": 2602, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9196663577386469, + "FN": 1162, + "FP": 1005, + "IoU": 0.8512799396060668, + "TN": 481939, + "TP": 12404, + "n_pred": 13409, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8672602185350061, + "FN": 1243, + "FP": 725, + "IoU": 0.7656305823508396, + "TN": 488113, + "TP": 6429, + "n_pred": 7154, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9448721897135818, + "FN": 102, + "FP": 793, + "IoU": 0.8955049620548745, + "TN": 487945, + "TP": 7670, + "n_pred": 8463, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8434831641694861, + "FN": 2791, + "FP": 1095, + "IoU": 0.7293306401058717, + "TN": 482153, + "TP": 10471, + "n_pred": 11566, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8315112138439432, + "FN": 1821, + "FP": 876, + "IoU": 0.7116124893071001, + "TN": 487158, + "TP": 6655, + "n_pred": 7531, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8177919372625904, + "FN": 63, + "FP": 1424, + "IoU": 0.6917495854063018, + "TN": 491686, + "TP": 3337, + "n_pred": 4761, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_002/summary_cross_val.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_002/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..1bb3e99924bb57f87f8316088cb0bf40ecff4561 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_002/summary_cross_val.json @@ -0,0 +1,4416 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.7508398564712836, + "FN": 142.28985507246375, + "FP": 147.1594202898551, + "IoU": 0.6543856151721835, + "TN": 8633.652173913042, + "TP": 816.0289855072464, + "n_pred": 963.1884057971014, + "n_ref": 958.31884057971 + }, + "mean": { + "1": { + "Dice": 0.6606617869535351, + "FN": 89.65217391304348, + "FP": 218.43478260869566, + "IoU": 0.5675875653810092, + "TN": 8389.304347826086, + "TP": 1041.7391304347825, + "n_pred": 1260.1739130434783, + "n_ref": 1131.391304347826 + }, + "2": { + "Dice": 0.7445213658092827, + "FN": 194.52173913043478, + "FP": 112.52173913043478, + "IoU": 0.631156260443293, + "TN": 8824.91304347826, + "TP": 607.1739130434783, + "n_pred": 719.695652173913, + "n_ref": 801.695652173913 + }, + "3": { + "Dice": 0.8473364166510329, + "FN": 142.69565217391303, + "FP": 110.52173913043478, + "IoU": 0.7644130196922486, + "TN": 8686.739130434782, + "TP": 799.1739130434783, + "n_pred": 909.695652173913, + "n_ref": 941.8695652173913 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7428571428571429, + "FN": 3, + "FP": 6, + "IoU": 0.5909090909090909, + "TN": 6378, + "TP": 13, + "n_pred": 19, + "n_ref": 16 + }, + "2": { + "Dice": 0.7732772225144661, + "FN": 137, + "FP": 294, + "IoU": 0.630360205831904, + "TN": 5234, + "TP": 735, + "n_pred": 1029, + "n_ref": 872 + }, + "3": { + "Dice": 0.9488255033557047, + "FN": 243, + "FP": 1, + "IoU": 0.902633679169992, + "TN": 3894, + "TP": 2262, + "n_pred": 2263, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6883835279655808, + "FN": 74, + "FP": 433, + "IoU": 0.5248359887535146, + "TN": 5333, + "TP": 560, + "n_pred": 993, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9420040644051899, + "FN": 67, + "FP": 304, + "IoU": 0.8903664302600472, + "TN": 9416, + "TP": 3013, + "n_pred": 3317, + "n_ref": 3080 + }, + "2": { + "Dice": 0.846696600384862, + "FN": 686, + "FP": 31, + "IoU": 0.7341490545050056, + "TN": 10103, + "TP": 1980, + "n_pred": 2011, + "n_ref": 2666 + }, + "3": { + "Dice": 0.9583101723179545, + "FN": 26, + "FP": 124, + "IoU": 0.919957310565635, + "TN": 10926, + "TP": 1724, + "n_pred": 1848, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2545454545454545, + "FN": 41, + "FP": 0, + "IoU": 0.14583333333333334, + "TN": 6352, + "TP": 7, + "n_pred": 7, + "n_ref": 48 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.28161888701517707, + "FN": 101, + "FP": 751, + "IoU": 0.16388616290480865, + "TN": 18181, + "TP": 167, + "n_pred": 918, + "n_ref": 268 + }, + "2": { + "Dice": 0.8040081116545389, + "FN": 724, + "FP": 919, + "IoU": 0.6722521444244963, + "TN": 14187, + "TP": 3370, + "n_pred": 4289, + "n_ref": 4094 + }, + "3": { + "Dice": 0.4028776978417266, + "FN": 9, + "FP": 1485, + "IoU": 0.25225225225225223, + "TN": 17202, + "TP": 504, + "n_pred": 1989, + "n_ref": 513 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 248, + "IoU": 0.0, + "TN": 18952, + "TP": 0, + "n_pred": 248, + "n_ref": 0 + }, + "2": { + "Dice": 0.883248730964467, + "FN": 62, + "FP": 30, + "IoU": 0.7909090909090909, + "TN": 18760, + "TP": 348, + "n_pred": 378, + "n_ref": 410 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.10638297872340426, + "FN": 23, + "FP": 61, + "IoU": 0.056179775280898875, + "TN": 6311, + "TP": 5, + "n_pred": 66, + "n_ref": 28 + }, + "2": { + "Dice": 0.8838878016960209, + "FN": 165, + "FP": 191, + "IoU": 0.7919345412039743, + "TN": 4689, + "TP": 1355, + "n_pred": 1546, + "n_ref": 1520 + }, + "3": { + "Dice": 0.9827586206896551, + "FN": 110, + "FP": 34, + "IoU": 0.9661016949152542, + "TN": 2152, + "TP": 4104, + "n_pred": 4138, + "n_ref": 4214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5579399141630901, + "FN": 22, + "FP": 184, + "IoU": 0.3869047619047619, + "TN": 6064, + "TP": 130, + "n_pred": 314, + "n_ref": 152 + }, + "2": { + "Dice": 0.8854545454545455, + "FN": 47, + "FP": 79, + "IoU": 0.7944535073409462, + "TN": 5787, + "TP": 487, + "n_pred": 566, + "n_ref": 534 + }, + "3": { + "Dice": 0.9404761904761905, + "FN": 2, + "FP": 38, + "IoU": 0.8876404494382022, + "TN": 6044, + "TP": 316, + "n_pred": 354, + "n_ref": 318 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9613601236476044, + "FN": 17, + "FP": 8, + "IoU": 0.9255952380952381, + "TN": 6064, + "TP": 311, + "n_pred": 319, + "n_ref": 328 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 6393, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9727682887528198, + "FN": 265, + "FP": 73, + "IoU": 0.9469803921568627, + "TN": 12825, + "TP": 6037, + "n_pred": 6110, + "n_ref": 6302 + }, + "2": { + "Dice": 0.8537789593619446, + "FN": 183, + "FP": 202, + "IoU": 0.7448641484426772, + "TN": 17691, + "TP": 1124, + "n_pred": 1326, + "n_ref": 1307 + }, + "3": { + "Dice": 0.9600557361820715, + "FN": 17, + "FP": 155, + "IoU": 0.9231799910674409, + "TN": 16961, + "TP": 2067, + "n_pred": 2222, + "n_ref": 2084 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6592427616926503, + "FN": 19, + "FP": 134, + "IoU": 0.49169435215946844, + "TN": 6099, + "TP": 148, + "n_pred": 282, + "n_ref": 167 + }, + "2": { + "Dice": 0.47058823529411764, + "FN": 18, + "FP": 0, + "IoU": 0.3076923076923077, + "TN": 6374, + "TP": 8, + "n_pred": 8, + "n_ref": 26 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7795945062132112, + "FN": 12, + "FP": 325, + "IoU": 0.6387995712754555, + "TN": 11867, + "TP": 596, + "n_pred": 921, + "n_ref": 608 + }, + "2": { + "Dice": 0.6771037181996086, + "FN": 1206, + "FP": 114, + "IoU": 0.5118343195266272, + "TN": 10096, + "TP": 1384, + "n_pred": 1498, + "n_ref": 2590 + }, + "3": { + "Dice": 0.7141361256544503, + "FN": 815, + "FP": 4, + "IoU": 0.5553745928338762, + "TN": 10958, + "TP": 1023, + "n_pred": 1027, + "n_ref": 1838 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5958416405582455, + "FN": 739, + "FP": 2099, + "IoU": 0.4243407707910751, + "TN": 14270, + "TP": 2092, + "n_pred": 4191, + "n_ref": 2831 + }, + "2": { + "Dice": 0.6893477240732051, + "FN": 999, + "FP": 325, + "IoU": 0.5259577515216612, + "TN": 16407, + "TP": 1469, + "n_pred": 1794, + "n_ref": 2468 + }, + "3": { + "Dice": 0.8103022239118038, + "FN": 1860, + "FP": 136, + "IoU": 0.6810992171273367, + "TN": 12941, + "TP": 4263, + "n_pred": 4399, + "n_ref": 6123 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7795698924731183, + "FN": 276, + "FP": 216, + "IoU": 0.6387665198237885, + "TN": 5038, + "TP": 870, + "n_pred": 1086, + "n_ref": 1146 + }, + "2": { + "Dice": 0.8015478164731896, + "FN": 66, + "FP": 293, + "IoU": 0.6688191881918819, + "TN": 5316, + "TP": 725, + "n_pred": 1018, + "n_ref": 791 + }, + "3": { + "Dice": 0.7751031636863824, + "FN": 182, + "FP": 472, + "IoU": 0.6327905670971364, + "TN": 4619, + "TP": 1127, + "n_pred": 1599, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9620853080568721, + "FN": 87, + "FP": 89, + "IoU": 0.9269406392694064, + "TN": 3991, + "TP": 2233, + "n_pred": 2322, + "n_ref": 2320 + }, + "2": { + "Dice": 0.8888888888888888, + "FN": 28, + "FP": 47, + "IoU": 0.8, + "TN": 6025, + "TP": 300, + "n_pred": 347, + "n_ref": 328 + }, + "3": { + "Dice": 0.8759124087591241, + "FN": 11, + "FP": 6, + "IoU": 0.7792207792207793, + "TN": 6323, + "TP": 60, + "n_pred": 66, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9790558871405317, + "FN": 147, + "FP": 46, + "IoU": 0.9589710884353742, + "TN": 1696, + "TP": 4511, + "n_pred": 4557, + "n_ref": 4658 + }, + "2": { + "Dice": 0.8709677419354839, + "FN": 127, + "FP": 49, + "IoU": 0.7714285714285715, + "TN": 5630, + "TP": 594, + "n_pred": 643, + "n_ref": 721 + }, + "3": { + "Dice": 0.9519427402862985, + "FN": 7, + "FP": 87, + "IoU": 0.9082926829268293, + "TN": 5375, + "TP": 931, + "n_pred": 1018, + "n_ref": 938 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.968, + "FN": 169, + "FP": 47, + "IoU": 0.937984496124031, + "TN": 2917, + "TP": 3267, + "n_pred": 3314, + "n_ref": 3436 + }, + "2": { + "Dice": 0.8390243902439024, + "FN": 26, + "FP": 7, + "IoU": 0.7226890756302521, + "TN": 6281, + "TP": 86, + "n_pred": 93, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8222375108969681, + "FN": 144.84057971014494, + "FP": 167.92753623188406, + "IoU": 0.7409551059841989, + "TN": 8426.376811594202, + "TP": 999.9855072463766, + "n_pred": 1167.9130434782608, + "n_ref": 1144.8260869565217 + }, + "mean": { + "1": { + "Dice": 0.7064664070068402, + "FN": 283.1304347826087, + "FP": 334.4347826086956, + "IoU": 0.6114170460781619, + "TN": 7939.913043478261, + "TP": 1181.6521739130435, + "n_pred": 1516.0869565217392, + "n_ref": 1464.7826086956522 + }, + "2": { + "Dice": 0.8515410761603921, + "FN": 85.73913043478261, + "FP": 138.47826086956522, + "IoU": 0.7585133989957661, + "TN": 8745.130434782608, + "TP": 769.7826086956521, + "n_pred": 908.2608695652174, + "n_ref": 855.5217391304348 + }, + "3": { + "Dice": 0.9087050495236719, + "FN": 65.65217391304348, + "FP": 30.869565217391305, + "IoU": 0.8529348728786686, + "TN": 8594.08695652174, + "TP": 1048.5217391304348, + "n_pred": 1079.391304347826, + "n_ref": 1114.1739130434783 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.5184954926950575, + "FN": 104, + "FP": 4543, + "IoU": 0.3499790180444817, + "TN": 18451, + "TP": 2502, + "n_pred": 7045, + "n_ref": 2606 + }, + "2": { + "Dice": 0.8468027876268492, + "FN": 383, + "FP": 870, + "IoU": 0.7343087362171332, + "TN": 20884, + "TP": 3463, + "n_pred": 4333, + "n_ref": 3846 + }, + "3": { + "Dice": 0.9657699152098818, + "FN": 402, + "FP": 252, + "IoU": 0.9338056680161944, + "TN": 15720, + "TP": 9226, + "n_pred": 9478, + "n_ref": 9628 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5389755011135857, + "FN": 412, + "FP": 2, + "IoU": 0.36890243902439024, + "TN": 12144, + "TP": 242, + "n_pred": 244, + "n_ref": 654 + }, + "2": { + "Dice": 0.6943556975505857, + "FN": 0, + "FP": 287, + "IoU": 0.531810766721044, + "TN": 12187, + "TP": 326, + "n_pred": 613, + "n_ref": 326 + }, + "3": { + "Dice": 0.5230769230769231, + "FN": 31, + "FP": 0, + "IoU": 0.3541666666666667, + "TN": 12752, + "TP": 17, + "n_pred": 17, + "n_ref": 48 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9044638276038994, + "FN": 875, + "FP": 56, + "IoU": 0.825590108654927, + "TN": 1062, + "TP": 4407, + "n_pred": 4463, + "n_ref": 5282 + }, + "2": { + "Dice": 0.8818297331639136, + "FN": 19, + "FP": 74, + "IoU": 0.7886363636363637, + "TN": 5960, + "TP": 347, + "n_pred": 421, + "n_ref": 366 + }, + "3": { + "Dice": 0.9578544061302682, + "FN": 33, + "FP": 0, + "IoU": 0.9191176470588235, + "TN": 5992, + "TP": 375, + "n_pred": 375, + "n_ref": 408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7952522255192879, + "FN": 6, + "FP": 63, + "IoU": 0.6600985221674877, + "TN": 6197, + "TP": 134, + "n_pred": 197, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8525622673919268, + "FN": 29, + "FP": 486, + "IoU": 0.7430139720558883, + "TN": 4396, + "TP": 1489, + "n_pred": 1975, + "n_ref": 1518 + }, + "2": { + "Dice": 0.9480048367593712, + "FN": 49, + "FP": 37, + "IoU": 0.9011494252873563, + "TN": 5530, + "TP": 784, + "n_pred": 821, + "n_ref": 833 + }, + "3": { + "Dice": 0.9482758620689655, + "FN": 4, + "FP": 14, + "IoU": 0.9016393442622951, + "TN": 6217, + "TP": 165, + "n_pred": 179, + "n_ref": 169 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 415, + "IoU": 0.0, + "TN": 12385, + "TP": 0, + "n_pred": 415, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8759367194004996, + "FN": 127, + "FP": 22, + "IoU": 0.7792592592592592, + "TN": 18525, + "TP": 526, + "n_pred": 548, + "n_ref": 653 + }, + "2": { + "Dice": 0.8994627782041443, + "FN": 343, + "FP": 574, + "IoU": 0.8172942817294282, + "TN": 14181, + "TP": 4102, + "n_pred": 4676, + "n_ref": 4445 + }, + "3": { + "Dice": 0.7392739273927392, + "FN": 244, + "FP": 151, + "IoU": 0.5863874345549738, + "TN": 18245, + "TP": 560, + "n_pred": 711, + "n_ref": 804 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7704026115342764, + "FN": 31, + "FP": 180, + "IoU": 0.6265486725663717, + "TN": 5835, + "TP": 354, + "n_pred": 534, + "n_ref": 385 + }, + "2": { + "Dice": 0.8935003915426781, + "FN": 70, + "FP": 202, + "IoU": 0.8075017692852088, + "TN": 4987, + "TP": 1141, + "n_pred": 1343, + "n_ref": 1211 + }, + "3": { + "Dice": 0.9627414903403864, + "FN": 139, + "FP": 23, + "IoU": 0.9281596452328159, + "TN": 4145, + "TP": 2093, + "n_pred": 2116, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9543999116705311, + "FN": 250, + "FP": 163, + "IoU": 0.9127771911298839, + "TN": 1665, + "TP": 4322, + "n_pred": 4485, + "n_ref": 4572 + }, + "2": { + "Dice": 0.898572501878287, + "FN": 30, + "FP": 105, + "IoU": 0.8158253751705321, + "TN": 5667, + "TP": 598, + "n_pred": 703, + "n_ref": 628 + }, + "3": { + "Dice": 0.9714285714285714, + "FN": 32, + "FP": 0, + "IoU": 0.9444444444444444, + "TN": 5824, + "TP": 544, + "n_pred": 544, + "n_ref": 576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9800503583188069, + "FN": 82, + "FP": 21, + "IoU": 0.9608811241929358, + "TN": 3767, + "TP": 2530, + "n_pred": 2551, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9454545454545454, + "FN": 24, + "FP": 96, + "IoU": 0.896551724137931, + "TN": 5240, + "TP": 1040, + "n_pred": 1136, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9878283151825753, + "FN": 24, + "FP": 14, + "IoU": 0.9759493670886076, + "TN": 4820, + "TP": 1542, + "n_pred": 1556, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8679334916864608, + "FN": 170, + "FP": 386, + "IoU": 0.7666806546370122, + "TN": 10417, + "TP": 1827, + "n_pred": 2213, + "n_ref": 1997 + }, + "2": { + "Dice": 0.888354186717998, + "FN": 109, + "FP": 123, + "IoU": 0.7991341991341991, + "TN": 11645, + "TP": 923, + "n_pred": 1046, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9249518922386145, + "FN": 85, + "FP": 32, + "IoU": 0.860381861575179, + "TN": 11962, + "TP": 721, + "n_pred": 753, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1089, + "IoU": 0.0, + "TN": 5311, + "TP": 0, + "n_pred": 1089, + "n_ref": 0 + }, + "2": { + "Dice": 0.8525469168900804, + "FN": 92, + "FP": 18, + "IoU": 0.7429906542056075, + "TN": 5972, + "TP": 318, + "n_pred": 336, + "n_ref": 410 + }, + "3": { + "Dice": 0.9717595944967415, + "FN": 9, + "FP": 30, + "IoU": 0.9450704225352112, + "TN": 5690, + "TP": 671, + "n_pred": 701, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8225913621262458, + "FN": 199, + "FP": 68, + "IoU": 0.698645598194131, + "TN": 5514, + "TP": 619, + "n_pred": 687, + "n_ref": 818 + }, + "2": { + "Dice": 0.9036144578313253, + "FN": 107, + "FP": 85, + "IoU": 0.8241758241758241, + "TN": 5308, + "TP": 900, + "n_pred": 985, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9671742808798647, + "FN": 8, + "FP": 89, + "IoU": 0.936435124508519, + "TN": 4874, + "TP": 1429, + "n_pred": 1518, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8210193599367839, + "FN": 436, + "FP": 17, + "IoU": 0.6963806970509383, + "TN": 11308, + "TP": 1039, + "n_pred": 1056, + "n_ref": 1475 + }, + "2": { + "Dice": 0.9255711127487104, + "FN": 46, + "FP": 55, + "IoU": 0.8614540466392319, + "TN": 12071, + "TP": 628, + "n_pred": 683, + "n_ref": 674 + }, + "3": { + "Dice": 0.9822419533851277, + "FN": 16, + "FP": 16, + "IoU": 0.965103598691385, + "TN": 11883, + "TP": 885, + "n_pred": 901, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7580659903116717, + "FN": 2538, + "FP": 109, + "IoU": 0.6103915219311157, + "TN": 6006, + "TP": 4147, + "n_pred": 4256, + "n_ref": 6685 + }, + "2": { + "Dice": 0.9202324352879028, + "FN": 164, + "FP": 138, + "IoU": 0.8522504892367906, + "TN": 10756, + "TP": 1742, + "n_pred": 1880, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9752012882447665, + "FN": 110, + "FP": 44, + "IoU": 0.9516027655562539, + "TN": 9618, + "TP": 3028, + "n_pred": 3072, + "n_ref": 3138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6689154125583809, + "FN": 1179, + "FP": 97, + "IoU": 0.5025341130604288, + "TN": 10235, + "TP": 1289, + "n_pred": 1386, + "n_ref": 2468 + }, + "2": { + "Dice": 0.41944847605224966, + "FN": 483, + "FP": 317, + "IoU": 0.26538108356290174, + "TN": 11711, + "TP": 289, + "n_pred": 606, + "n_ref": 772 + }, + "3": { + "Dice": 0.7713498622589532, + "FN": 302, + "FP": 30, + "IoU": 0.6278026905829597, + "TN": 11908, + "TP": 560, + "n_pred": 590, + "n_ref": 862 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9696502057613169, + "FN": 80, + "FP": 38, + "IoU": 0.9410883674488267, + "TN": 4397, + "TP": 1885, + "n_pred": 1923, + "n_ref": 1965 + }, + "2": { + "Dice": 0.9116541353383458, + "FN": 47, + "FP": 141, + "IoU": 0.8376511226252159, + "TN": 5242, + "TP": 970, + "n_pred": 1111, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9816474605207, + "FN": 71, + "FP": 15, + "IoU": 0.9639564124057, + "TN": 4014, + "TP": 2300, + "n_pred": 2315, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.7274770461494148, + "FN": 206.89855072463772, + "FP": 124.3623188405797, + "IoU": 0.6613752397278391, + "TN": 8640.246376811594, + "TP": 1045.8840579710145, + "n_pred": 1170.2463768115942, + "n_ref": 1252.7826086956522 + }, + "mean": { + "1": { + "Dice": 0.6146483485127118, + "FN": 462.82608695652175, + "FP": 81.56521739130434, + "IoU": 0.5382174060216675, + "TN": 7884.130434782609, + "TP": 1588.8695652173913, + "n_pred": 1670.4347826086957, + "n_ref": 2051.695652173913 + }, + "2": { + "Dice": 0.7650227764863637, + "FN": 119.73913043478261, + "FP": 86.52173913043478, + "IoU": 0.6825897982630087, + "TN": 9211.652173913044, + "TP": 599.4782608695652, + "n_pred": 686.0, + "n_ref": 719.2173913043479 + }, + "3": { + "Dice": 0.8027600134491685, + "FN": 38.130434782608695, + "FP": 205.0, + "IoU": 0.7633185148988412, + "TN": 8824.95652173913, + "TP": 949.304347826087, + "n_pred": 1154.304347826087, + "n_ref": 987.4347826086956 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.931237721021611, + "FN": 93, + "FP": 82, + "IoU": 0.8713235294117647, + "TN": 5040, + "TP": 1185, + "n_pred": 1267, + "n_ref": 1278 + }, + "3": { + "Dice": 0.9855882985588299, + "FN": 51, + "FP": 16, + "IoU": 0.9715860899067006, + "TN": 4042, + "TP": 2291, + "n_pred": 2307, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3939269593762823, + "FN": 1476, + "FP": 1, + "IoU": 0.2452733776188043, + "TN": 10843, + "TP": 480, + "n_pred": 481, + "n_ref": 1956 + }, + "2": { + "Dice": 0.8623063683304647, + "FN": 119, + "FP": 41, + "IoU": 0.7579425113464447, + "TN": 12139, + "TP": 501, + "n_pred": 542, + "n_ref": 620 + }, + "3": { + "Dice": 0.930841121495327, + "FN": 58, + "FP": 16, + "IoU": 0.8706293706293706, + "TN": 12228, + "TP": 498, + "n_pred": 514, + "n_ref": 556 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9795738427626745, + "FN": 65, + "FP": 74, + "IoU": 0.9599654377880185, + "TN": 9328, + "TP": 3333, + "n_pred": 3407, + "n_ref": 3398 + }, + "2": { + "Dice": 0.7473148671565857, + "FN": 784, + "FP": 110, + "IoU": 0.5965703971119134, + "TN": 10584, + "TP": 1322, + "n_pred": 1432, + "n_ref": 2106 + }, + "3": { + "Dice": 0.9514211301098403, + "FN": 359, + "FP": 70, + "IoU": 0.9073434125269978, + "TN": 8170, + "TP": 4201, + "n_pred": 4271, + "n_ref": 4560 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9227871939736346, + "FN": 0, + "FP": 82, + "IoU": 0.8566433566433567, + "TN": 5828, + "TP": 490, + "n_pred": 572, + "n_ref": 490 + }, + "2": { + "Dice": 0.8993808049535603, + "FN": 150, + "FP": 110, + "IoU": 0.8171589310829818, + "TN": 4978, + "TP": 1162, + "n_pred": 1272, + "n_ref": 1312 + }, + "3": { + "Dice": 0.9784987768765289, + "FN": 84, + "FP": 83, + "IoU": 0.9579026972523318, + "TN": 2433, + "TP": 3800, + "n_pred": 3883, + "n_ref": 3884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.93310426285837, + "FN": 538, + "FP": 85, + "IoU": 0.874597423510467, + "TN": 7832, + "TP": 4345, + "n_pred": 4430, + "n_ref": 4883 + }, + "2": { + "Dice": 0.8477075985892915, + "FN": 217, + "FP": 258, + "IoU": 0.7356705620478575, + "TN": 11003, + "TP": 1322, + "n_pred": 1580, + "n_ref": 1539 + }, + "3": { + "Dice": 0.9713275726630007, + "FN": 103, + "FP": 43, + "IoU": 0.9442535318823979, + "TN": 10181, + "TP": 2473, + "n_pred": 2516, + "n_ref": 2576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.656934306569343, + "FN": 327, + "FP": 96, + "IoU": 0.4891304347826087, + "TN": 11972, + "TP": 405, + "n_pred": 501, + "n_ref": 732 + }, + "3": { + "Dice": 0.9021897810218978, + "FN": 86, + "FP": 48, + "IoU": 0.8218085106382979, + "TN": 12048, + "TP": 618, + "n_pred": 666, + "n_ref": 704 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9088524590163934, + "FN": 89, + "FP": 50, + "IoU": 0.8329326923076923, + "TN": 5568, + "TP": 693, + "n_pred": 743, + "n_ref": 782 + }, + "3": { + "Dice": 0.9780893952673094, + "FN": 9, + "FP": 66, + "IoU": 0.9571183533447685, + "TN": 4651, + "TP": 1674, + "n_pred": 1740, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6861313868613139, + "FN": 17, + "FP": 26, + "IoU": 0.5222222222222223, + "TN": 6310, + "TP": 47, + "n_pred": 73, + "n_ref": 64 + }, + "2": { + "Dice": 0.8769302760879738, + "FN": 135, + "FP": 128, + "IoU": 0.7808333333333334, + "TN": 5200, + "TP": 937, + "n_pred": 1065, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9675727229375298, + "FN": 25, + "FP": 111, + "IoU": 0.9371824480369515, + "TN": 4235, + "TP": 2029, + "n_pred": 2140, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5952878019683865, + "FN": 846, + "FP": 511, + "IoU": 0.4237791932059448, + "TN": 16845, + "TP": 998, + "n_pred": 1509, + "n_ref": 1844 + }, + "2": { + "Dice": 0.9254370317516946, + "FN": 69, + "FP": 140, + "IoU": 0.8612217795484728, + "TN": 17694, + "TP": 1297, + "n_pred": 1437, + "n_ref": 1366 + }, + "3": { + "Dice": 0.9470468431771895, + "FN": 5, + "FP": 47, + "IoU": 0.8994197292069632, + "TN": 18683, + "TP": 465, + "n_pred": 512, + "n_ref": 470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7622284257798276, + "FN": 1946, + "FP": 13, + "IoU": 0.6158070209845068, + "TN": 1301, + "TP": 3140, + "n_pred": 3153, + "n_ref": 5086 + }, + "2": { + "Dice": 0.9568345323741008, + "FN": 19, + "FP": 17, + "IoU": 0.9172413793103448, + "TN": 5965, + "TP": 399, + "n_pred": 416, + "n_ref": 418 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8877721943048577, + "FN": 174, + "FP": 27, + "IoU": 0.7981927710843374, + "TN": 5404, + "TP": 795, + "n_pred": 822, + "n_ref": 969 + }, + "3": { + "Dice": 0.9660107334525939, + "FN": 15, + "FP": 80, + "IoU": 0.9342560553633218, + "TN": 4955, + "TP": 1350, + "n_pred": 1430, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9137813271686019, + "FN": 1610, + "FP": 31, + "IoU": 0.8412498790751669, + "TN": 2463, + "TP": 8696, + "n_pred": 8727, + "n_ref": 10306 + }, + "2": { + "Dice": 0.8787666433076384, + "FN": 119, + "FP": 54, + "IoU": 0.78375, + "TN": 12000, + "TP": 627, + "n_pred": 681, + "n_ref": 746 + }, + "3": { + "Dice": 0.9275862068965517, + "FN": 17, + "FP": 25, + "IoU": 0.864951768488746, + "TN": 12489, + "TP": 269, + "n_pred": 294, + "n_ref": 286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8315844490009247, + "FN": 4142, + "FP": 47, + "IoU": 0.711719771522951, + "TN": 4669, + "TP": 10342, + "n_pred": 10389, + "n_ref": 14484 + }, + "2": { + "Dice": 0.759075907590759, + "FN": 234, + "FP": 496, + "IoU": 0.6117021276595744, + "TN": 17320, + "TP": 1150, + "n_pred": 1646, + "n_ref": 1384 + }, + "3": { + "Dice": 0.38501170960187353, + "FN": 29, + "FP": 1284, + "IoU": 0.23839907192575405, + "TN": 17476, + "TP": 411, + "n_pred": 1695, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 15, + "IoU": 0.0, + "TN": 12785, + "TP": 0, + "n_pred": 15, + "n_ref": 0 + }, + "2": { + "Dice": 0.9292389853137517, + "FN": 162, + "FP": 50, + "IoU": 0.8678304239401496, + "TN": 11196, + "TP": 1392, + "n_pred": 1442, + "n_ref": 1554 + }, + "3": { + "Dice": 0.9705197827773467, + "FN": 24, + "FP": 52, + "IoU": 0.9427279577995479, + "TN": 11473, + "TP": 1251, + "n_pred": 1303, + "n_ref": 1275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9720228809152366, + "FN": 5, + "FP": 264, + "IoU": 0.9455685957102388, + "TN": 1458, + "TP": 4673, + "n_pred": 4937, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9375975039001561, + "FN": 63, + "FP": 17, + "IoU": 0.882525697503671, + "TN": 5719, + "TP": 601, + "n_pred": 618, + "n_ref": 664 + }, + "3": { + "Dice": 0.9824561403508771, + "FN": 12, + "FP": 6, + "IoU": 0.9655172413793104, + "TN": 5878, + "TP": 504, + "n_pred": 510, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 405, + "IoU": 0.0, + "TN": 12395, + "TP": 0, + "n_pred": 405, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 157, + "IoU": 0.0, + "TN": 12643, + "TP": 0, + "n_pred": 157, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 1005, + "IoU": 0.0, + "TN": 11795, + "TP": 0, + "n_pred": 1005, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 322, + "IoU": 0.0, + "TN": 18878, + "TP": 0, + "n_pred": 322, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 157, + "IoU": 0.0, + "TN": 19043, + "TP": 0, + "n_pred": 157, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 1763, + "IoU": 0.0, + "TN": 17437, + "TP": 0, + "n_pred": 1763, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.7784696375196575, + "FN": 203.36231884057972, + "FP": 170.42028985507247, + "IoU": 0.6888771250923416, + "TN": 9134.202898550724, + "TP": 1065.927536231884, + "n_pred": 1236.3478260869567, + "n_ref": 1269.2898550724638 + }, + "mean": { + "1": { + "Dice": 0.5870650807274113, + "FN": 298.7826086956522, + "FP": 135.56521739130434, + "IoU": 0.49458917454778195, + "TN": 9381.608695652174, + "TP": 757.9565217391304, + "n_pred": 893.5217391304348, + "n_ref": 1056.7391304347825 + }, + "2": { + "Dice": 0.8486351074893597, + "FN": 204.95652173913044, + "FP": 169.7391304347826, + "IoU": 0.7418611579470592, + "TN": 9158.652173913044, + "TP": 1040.5652173913043, + "n_pred": 1210.304347826087, + "n_ref": 1245.5217391304348 + }, + "3": { + "Dice": 0.8997087243422017, + "FN": 106.34782608695652, + "FP": 205.95652173913044, + "IoU": 0.8301810427821837, + "TN": 8862.347826086956, + "TP": 1399.2608695652175, + "n_pred": 1605.2173913043478, + "n_ref": 1505.608695652174 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.659132007233273, + "FN": 3591, + "FP": 179, + "IoU": 0.4915711395819285, + "TN": 24585, + "TP": 3645, + "n_pred": 3824, + "n_ref": 7236 + }, + "2": { + "Dice": 0.7848757432535447, + "FN": 478, + "FP": 933, + "IoU": 0.645922208281054, + "TN": 28015, + "TP": 2574, + "n_pred": 3507, + "n_ref": 3052 + }, + "3": { + "Dice": 0.8596028329398695, + "FN": 235, + "FP": 2798, + "IoU": 0.7537749634680955, + "TN": 19682, + "TP": 9285, + "n_pred": 12083, + "n_ref": 9520 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7424749163879598, + "FN": 0, + "FP": 154, + "IoU": 0.5904255319148937, + "TN": 6024, + "TP": 222, + "n_pred": 376, + "n_ref": 222 + }, + "2": { + "Dice": 0.7794561933534743, + "FN": 73, + "FP": 0, + "IoU": 0.6386138613861386, + "TN": 6198, + "TP": 129, + "n_pred": 129, + "n_ref": 202 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.674978254566541, + "FN": 1088, + "FP": 33, + "IoU": 0.5094091903719913, + "TN": 16915, + "TP": 1164, + "n_pred": 1197, + "n_ref": 2252 + }, + "2": { + "Dice": 0.7722150378717901, + "FN": 396, + "FP": 837, + "IoU": 0.6289497442070419, + "TN": 15877, + "TP": 2090, + "n_pred": 2927, + "n_ref": 2486 + }, + "3": { + "Dice": 0.9664077851595396, + "FN": 696, + "FP": 22, + "IoU": 0.9349990946949122, + "TN": 8154, + "TP": 10328, + "n_pred": 10350, + "n_ref": 11024 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9845824411134904, + "FN": 68, + "FP": 76, + "IoU": 0.9696330662167861, + "TN": 1658, + "TP": 4598, + "n_pred": 4674, + "n_ref": 4666 + }, + "2": { + "Dice": 0.9170829170829171, + "FN": 25, + "FP": 58, + "IoU": 0.8468634686346863, + "TN": 5858, + "TP": 459, + "n_pred": 517, + "n_ref": 484 + }, + "3": { + "Dice": 0.9876543209876543, + "FN": 6, + "FP": 10, + "IoU": 0.975609756097561, + "TN": 5744, + "TP": 640, + "n_pred": 650, + "n_ref": 646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8680967594705614, + "FN": 162, + "FP": 127, + "IoU": 0.7669354838709678, + "TN": 5160, + "TP": 951, + "n_pred": 1078, + "n_ref": 1113 + }, + "3": { + "Dice": 0.9746562862348849, + "FN": 4, + "FP": 149, + "IoU": 0.9505654281098546, + "TN": 3305, + "TP": 2942, + "n_pred": 3091, + "n_ref": 2946 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8120915032679739, + "FN": 201, + "FP": 489, + "IoU": 0.6836313617606602, + "TN": 10619, + "TP": 1491, + "n_pred": 1980, + "n_ref": 1692 + }, + "3": { + "Dice": 0.9289099526066351, + "FN": 24, + "FP": 81, + "IoU": 0.8672566371681416, + "TN": 12009, + "TP": 686, + "n_pred": 767, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5982256020278834, + "FN": 584, + "FP": 50, + "IoU": 0.4267631103074141, + "TN": 18094, + "TP": 472, + "n_pred": 522, + "n_ref": 1056 + }, + "2": { + "Dice": 0.8632656931538024, + "FN": 2428, + "FP": 456, + "IoU": 0.7594260927594261, + "TN": 7212, + "TP": 9104, + "n_pred": 9560, + "n_ref": 11532 + }, + "3": { + "Dice": 0.6274509803921569, + "FN": 890, + "FP": 1086, + "IoU": 0.45714285714285713, + "TN": 15560, + "TP": 1664, + "n_pred": 2750, + "n_ref": 2554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8366013071895425, + "FN": 200, + "FP": 0, + "IoU": 0.7191011235955056, + "TN": 5688, + "TP": 512, + "n_pred": 512, + "n_ref": 712 + }, + "2": { + "Dice": 0.9183782818360422, + "FN": 321, + "FP": 136, + "IoU": 0.8490752972258917, + "TN": 3372, + "TP": 2571, + "n_pred": 2707, + "n_ref": 2892 + }, + "3": { + "Dice": 0.9456749825134064, + "FN": 18, + "FP": 215, + "IoU": 0.8969482529854047, + "TN": 4139, + "TP": 2028, + "n_pred": 2243, + "n_ref": 2046 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 110, + "IoU": 0.0, + "TN": 12690, + "TP": 0, + "n_pred": 110, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 290, + "IoU": 0.0, + "TN": 12510, + "TP": 0, + "n_pred": 290, + "n_ref": 0 + }, + "2": { + "Dice": 0.9212765957446809, + "FN": 23, + "FP": 51, + "IoU": 0.854043392504931, + "TN": 12293, + "TP": 433, + "n_pred": 484, + "n_ref": 456 + }, + "3": { + "Dice": 0.9465648854961832, + "FN": 10, + "FP": 18, + "IoU": 0.8985507246376812, + "TN": 12524, + "TP": 248, + "n_pred": 266, + "n_ref": 258 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 529, + "IoU": 0.0, + "TN": 12271, + "TP": 0, + "n_pred": 529, + "n_ref": 0 + }, + "2": { + "Dice": 0.892101551480959, + "FN": 139, + "FP": 167, + "IoU": 0.8052196053469128, + "TN": 11229, + "TP": 1265, + "n_pred": 1432, + "n_ref": 1404 + }, + "3": { + "Dice": 0.9319686935580975, + "FN": 106, + "FP": 120, + "IoU": 0.8726042841037204, + "TN": 11026, + "TP": 1548, + "n_pred": 1668, + "n_ref": 1654 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7683124241197895, + "FN": 1115, + "FP": 1175, + "IoU": 0.6237884015114178, + "TN": 6713, + "TP": 3797, + "n_pred": 4972, + "n_ref": 4912 + }, + "2": { + "Dice": 0.7361623616236163, + "FN": 224, + "FP": 348, + "IoU": 0.5824817518248175, + "TN": 11430, + "TP": 798, + "n_pred": 1146, + "n_ref": 1022 + }, + "3": { + "Dice": 0.9219110378912685, + "FN": 105, + "FP": 132, + "IoU": 0.8551344743276283, + "TN": 11164, + "TP": 1399, + "n_pred": 1531, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8888888888888888, + "FN": 155, + "FP": 316, + "IoU": 0.8, + "TN": 10445, + "TP": 1884, + "n_pred": 2200, + "n_ref": 2039 + }, + "2": { + "Dice": 0.8843085106382979, + "FN": 127, + "FP": 47, + "IoU": 0.7926102502979738, + "TN": 11961, + "TP": 665, + "n_pred": 712, + "n_ref": 792 + }, + "3": { + "Dice": 0.7838023335621139, + "FN": 308, + "FP": 7, + "IoU": 0.6444695259593679, + "TN": 11914, + "TP": 571, + "n_pred": 578, + "n_ref": 879 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8915851272015656, + "FN": 71, + "FP": 206, + "IoU": 0.8043785310734464, + "TN": 4984, + "TP": 1139, + "n_pred": 1345, + "n_ref": 1210 + }, + "2": { + "Dice": 0.8829452485840151, + "FN": 117, + "FP": 255, + "IoU": 0.7904225352112676, + "TN": 4625, + "TP": 1403, + "n_pred": 1658, + "n_ref": 1520 + }, + "3": { + "Dice": 0.9219006007646096, + "FN": 44, + "FP": 99, + "IoU": 0.8551165146909828, + "TN": 5413, + "TP": 844, + "n_pred": 943, + "n_ref": 888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.7600622765537755, + "FN": 129.34782608695653, + "FP": 117.85507246376812, + "IoU": 0.667350946229115, + "TN": 8844.898550724638, + "TP": 925.2898550724639, + "n_pred": 1043.144927536232, + "n_ref": 1054.6376811594203 + }, + "mean": { + "1": { + "Dice": 0.6165251702854796, + "FN": 138.52173913043478, + "FP": 125.73913043478261, + "IoU": 0.5170272505784993, + "TN": 9350.260869565218, + "TP": 402.8695652173913, + "n_pred": 528.6086956521739, + "n_ref": 541.3913043478261 + }, + "2": { + "Dice": 0.8584199136415469, + "FN": 132.2608695652174, + "FP": 143.1304347826087, + "IoU": 0.7572525454839448, + "TN": 8738.434782608696, + "TP": 1003.5652173913044, + "n_pred": 1146.695652173913, + "n_ref": 1135.8260869565217 + }, + "3": { + "Dice": 0.8052417457342997, + "FN": 117.26086956521739, + "FP": 84.69565217391305, + "IoU": 0.7277730426249008, + "TN": 8446.0, + "TP": 1369.4347826086957, + "n_pred": 1454.1304347826087, + "n_ref": 1486.695652173913 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7414548641542507, + "FN": 516, + "FP": 74, + "IoU": 0.5891364902506964, + "TN": 11364, + "TP": 846, + "n_pred": 920, + "n_ref": 1362 + }, + "2": { + "Dice": 0.8, + "FN": 362, + "FP": 482, + "IoU": 0.6666666666666666, + "TN": 10268, + "TP": 1688, + "n_pred": 2170, + "n_ref": 2050 + }, + "3": { + "Dice": 0.8957298907646475, + "FN": 1137, + "FP": 18, + "IoU": 0.8111510791366906, + "TN": 6684, + "TP": 4961, + "n_pred": 4979, + "n_ref": 6098 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8, + "FN": 0, + "FP": 1, + "IoU": 0.6666666666666666, + "TN": 12797, + "TP": 2, + "n_pred": 3, + "n_ref": 2 + }, + "2": { + "Dice": 0.9117530668777206, + "FN": 146, + "FP": 77, + "IoU": 0.8378181818181818, + "TN": 11425, + "TP": 1152, + "n_pred": 1229, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9828813816088472, + "FN": 62, + "FP": 51, + "IoU": 0.9663389931486446, + "TN": 9443, + "TP": 3244, + "n_pred": 3295, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8093645484949833, + "FN": 112, + "FP": 2, + "IoU": 0.6797752808988764, + "TN": 6044, + "TP": 242, + "n_pred": 244, + "n_ref": 354 + }, + "2": { + "Dice": 0.8794701986754967, + "FN": 4, + "FP": 87, + "IoU": 0.7848699763593381, + "TN": 5977, + "TP": 332, + "n_pred": 419, + "n_ref": 336 + }, + "3": { + "Dice": 0.6666666666666666, + "FN": 2, + "FP": 2, + "IoU": 0.5, + "TN": 6392, + "TP": 4, + "n_pred": 6, + "n_ref": 6 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9401611047180668, + "FN": 105, + "FP": 103, + "IoU": 0.8870792616720955, + "TN": 4558, + "TP": 1634, + "n_pred": 1737, + "n_ref": 1739 + }, + "3": { + "Dice": 0.9399641577060932, + "FN": 68, + "FP": 66, + "IoU": 0.8867286559594252, + "TN": 5217, + "TP": 1049, + "n_pred": 1115, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8185654008438819, + "FN": 151, + "FP": 150, + "IoU": 0.6928571428571428, + "TN": 31020, + "TP": 679, + "n_pred": 829, + "n_ref": 830 + }, + "2": { + "Dice": 0.9066565137381813, + "FN": 1010, + "FP": 461, + "IoU": 0.8292513058618688, + "TN": 23385, + "TP": 7144, + "n_pred": 7605, + "n_ref": 8154 + }, + "3": { + "Dice": 0.8304790270538596, + "FN": 349, + "FP": 334, + "IoU": 0.7101018675721562, + "TN": 29644, + "TP": 1673, + "n_pred": 2007, + "n_ref": 2022 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7556415215989684, + "FN": 318, + "FP": 61, + "IoU": 0.6072538860103627, + "TN": 11835, + "TP": 586, + "n_pred": 647, + "n_ref": 904 + }, + "2": { + "Dice": 0.9101462216765264, + "FN": 466, + "FP": 339, + "IoU": 0.8351085620647276, + "TN": 7918, + "TP": 4077, + "n_pred": 4416, + "n_ref": 4543 + }, + "3": { + "Dice": 0.9591187270501836, + "FN": 308, + "FP": 26, + "IoU": 0.9214487300094073, + "TN": 8548, + "TP": 3918, + "n_pred": 3944, + "n_ref": 4226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 50, + "FP": 17, + "IoU": 0.0, + "TN": 12733, + "TP": 0, + "n_pred": 17, + "n_ref": 50 + }, + "2": { + "Dice": 0.7852738483859267, + "FN": 407, + "FP": 777, + "IoU": 0.6464616303374141, + "TN": 9451, + "TP": 2165, + "n_pred": 2942, + "n_ref": 2572 + }, + "3": { + "Dice": 0.9631083202511774, + "FN": 301, + "FP": 357, + "IoU": 0.9288417865253595, + "TN": 3553, + "TP": 8589, + "n_pred": 8946, + "n_ref": 8890 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6792452830188679, + "FN": 6, + "FP": 11, + "IoU": 0.5142857142857142, + "TN": 6365, + "TP": 18, + "n_pred": 29, + "n_ref": 24 + }, + "2": { + "Dice": 0.9209056159952955, + "FN": 122, + "FP": 147, + "IoU": 0.8534059945504087, + "TN": 4565, + "TP": 1566, + "n_pred": 1713, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9790402015805749, + "FN": 134, + "FP": 49, + "IoU": 0.9589409916984519, + "TN": 1943, + "TP": 4274, + "n_pred": 4323, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7744527013456517, + "FN": 362, + "FP": 1884, + "IoU": 0.6319239593575877, + "TN": 6698, + "TP": 3856, + "n_pred": 5740, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8607709750566893, + "FN": 130, + "FP": 177, + "IoU": 0.7555732484076433, + "TN": 11544, + "TP": 949, + "n_pred": 1126, + "n_ref": 1079 + }, + "3": { + "Dice": 0.9096651926721415, + "FN": 131, + "FP": 12, + "IoU": 0.8342989571263036, + "TN": 11937, + "TP": 720, + "n_pred": 732, + "n_ref": 851 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.915903890160183, + "FN": 31, + "FP": 263, + "IoU": 0.8448548812664908, + "TN": 10905, + "TP": 1601, + "n_pred": 1864, + "n_ref": 1632 + }, + "2": { + "Dice": 0.8121752041573868, + "FN": 13, + "FP": 240, + "IoU": 0.68375, + "TN": 12000, + "TP": 547, + "n_pred": 787, + "n_ref": 560 + }, + "3": { + "Dice": 0.612037708484409, + "FN": 4, + "FP": 531, + "IoU": 0.44096133751306166, + "TN": 11843, + "TP": 422, + "n_pred": 953, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 356, + "IoU": 0.0, + "TN": 12444, + "TP": 0, + "n_pred": 356, + "n_ref": 0 + }, + "2": { + "Dice": 0.7033707865168539, + "FN": 74, + "FP": 190, + "IoU": 0.5424610051993067, + "TN": 12223, + "TP": 313, + "n_pred": 503, + "n_ref": 387 + }, + "3": { + "Dice": 0.8343399482312338, + "FN": 74, + "FP": 310, + "IoU": 0.7157660991857883, + "TN": 11449, + "TP": 967, + "n_pred": 1277, + "n_ref": 1041 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.892416225749559, + "FN": 49, + "FP": 12, + "IoU": 0.8057324840764332, + "TN": 6086, + "TP": 253, + "n_pred": 265, + "n_ref": 302 + }, + "2": { + "Dice": 0.8897302413629911, + "FN": 110, + "FP": 123, + "IoU": 0.8013640238704177, + "TN": 5227, + "TP": 940, + "n_pred": 1063, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9656593406593407, + "FN": 98, + "FP": 2, + "IoU": 0.9335989375830013, + "TN": 4894, + "TP": 1406, + "n_pred": 1408, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9529569892473119, + "FN": 55, + "FP": 15, + "IoU": 0.9101412066752247, + "TN": 5621, + "TP": 709, + "n_pred": 724, + "n_ref": 764 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.10071942446043165, + "FN": 123, + "FP": 2, + "IoU": 0.05303030303030303, + "TN": 6268, + "TP": 7, + "n_pred": 9, + "n_ref": 130 + }, + "2": { + "Dice": 0.8132992327365729, + "FN": 41, + "FP": 32, + "IoU": 0.6853448275862069, + "TN": 6168, + "TP": 159, + "n_pred": 191, + "n_ref": 200 + }, + "3": { + "Dice": 0.0, + "FN": 24, + "FP": 0, + "IoU": 0.0, + "TN": 6376, + "TP": 0, + "n_pred": 0, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.39063153492262653, + "FN": 1413, + "FP": 44, + "IoU": 0.24272349272349272, + "TN": 4476, + "TP": 467, + "n_pred": 511, + "n_ref": 1880 + }, + "2": { + "Dice": 0.8841657810839533, + "FN": 52, + "FP": 57, + "IoU": 0.7923809523809524, + "TN": 5875, + "TP": 416, + "n_pred": 473, + "n_ref": 468 + }, + "3": { + "Dice": 0.7346938775510204, + "FN": 5, + "FP": 190, + "IoU": 0.5806451612903226, + "TN": 5935, + "TP": 270, + "n_pred": 460, + "n_ref": 275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2905899/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.7678172655182198, + "FN": 165.34782608695653, + "FP": 145.54492753623188, + "IoU": 0.6825888064411356, + "TN": 8735.875362318842, + "TP": 970.623188405797, + "n_pred": 1116.168115942029, + "n_ref": 1135.9710144927535 + }, + "mean": { + "1": { + "Dice": 0.6370733586971956, + "FN": 254.5826086956522, + "FP": 179.1478260869565, + "IoU": 0.545767688521424, + "TN": 8589.043478260868, + "TP": 994.6173913043476, + "n_pred": 1173.7652173913043, + "n_ref": 1249.2 + }, + "2": { + "Dice": 0.8136280479173891, + "FN": 147.44347826086957, + "FP": 130.0782608695652, + "IoU": 0.7142746322266144, + "TN": 8935.756521739131, + "TP": 804.1130434782609, + "n_pred": 934.191304347826, + "n_ref": 951.5565217391304 + }, + "3": { + "Dice": 0.8527503899400749, + "FN": 94.01739130434781, + "FP": 127.4086956521739, + "IoU": 0.7877240985753686, + "TN": 8682.826086956522, + "TP": 1113.1391304347828, + "n_pred": 1240.5478260869565, + "n_ref": 1207.1565217391303 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_003/summary.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_003/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..30ef189c53a0415ee91016552b2ea08dc3f04530 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_003/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8866384069668859, + "FN": 996.7866666666667, + "FP": 942.06, + "IoU": 0.8039903058392776, + "TN": 843292.4666666667, + "TP": 9197.326666666666, + "n_pred": 10139.386666666667, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.870324413536143, + "FN": 1114.7, + "FP": 1018.82, + "IoU": 0.7775644538113563, + "TN": 843555.76, + "TP": 8739.36, + "n_pred": 9758.18, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8578112109055717, + "FN": 1360.52, + "FP": 1223.2, + "IoU": 0.7564363152313187, + "TN": 843149.94, + "TP": 8694.98, + "n_pred": 9918.18, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9317795964589428, + "FN": 515.14, + "FP": 584.16, + "IoU": 0.8779701484751576, + "TN": 843171.7, + "TP": 10157.64, + "n_pred": 10741.8, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9010960999235279, + "FN": 841, + "FP": 1487, + "IoU": 0.8199953607051728, + "TN": 1092987, + "TP": 10605, + "n_pred": 12092, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8526308530446176, + "FN": 1092, + "FP": 3182, + "IoU": 0.7431181632407742, + "TN": 1089282, + "TP": 12364, + "n_pred": 15546, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9436466755158682, + "FN": 748, + "FP": 2054, + "IoU": 0.8933059172949509, + "TN": 1079658, + "TP": 23460, + "n_pred": 25514, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8128644939965695, + "FN": 139, + "FP": 2043, + "IoU": 0.6847276405143765, + "TN": 1098999, + "TP": 4739, + "n_pred": 6782, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8767931694760963, + "FN": 2014, + "FP": 1911, + "IoU": 0.7806159521547147, + "TN": 1088029, + "TP": 13966, + "n_pred": 15877, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9299550555891397, + "FN": 791, + "FP": 1874, + "IoU": 0.8690803694242484, + "TN": 1085564, + "TP": 17691, + "n_pred": 19565, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.899898767343536, + "FN": 1314, + "FP": 367, + "IoU": 0.8180145068745264, + "TN": 900203, + "TP": 7556, + "n_pred": 7923, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8931059151323468, + "FN": 1926, + "FP": 913, + "IoU": 0.806857609361181, + "TN": 894741, + "TP": 11860, + "n_pred": 12773, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9730445694102338, + "FN": 475, + "FP": 685, + "IoU": 0.9475041860886093, + "TN": 887343, + "TP": 20937, + "n_pred": 21622, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8466740053467526, + "FN": 1594, + "FP": 356, + "IoU": 0.7341150804472321, + "TN": 902106, + "TP": 5384, + "n_pred": 5740, + "n_ref": 6978 + }, + "2": { + "Dice": 0.892143238909674, + "FN": 1805, + "FP": 1222, + "IoU": 0.8052875337707449, + "TN": 893894, + "TP": 12519, + "n_pred": 13741, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9733691275167785, + "FN": 505, + "FP": 487, + "IoU": 0.9481198682077298, + "TN": 890319, + "TP": 18129, + "n_pred": 18616, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9287400542100201, + "FN": 2934, + "FP": 326, + "IoU": 0.866960496245511, + "TN": 1401256, + "TP": 21244, + "n_pred": 21570, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8998212275706813, + "FN": 1494, + "FP": 1532, + "IoU": 0.8178863745787193, + "TN": 1409144, + "TP": 13590, + "n_pred": 15122, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9759470480468058, + "FN": 505, + "FP": 716, + "IoU": 0.9530240073868883, + "TN": 1399768, + "TP": 24771, + "n_pred": 25487, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9203028603477286, + "FN": 1141, + "FP": 1701, + "IoU": 0.8523713053867331, + "TN": 1406509, + "TP": 16409, + "n_pred": 18110, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8981642638993793, + "FN": 1393, + "FP": 1708, + "IoU": 0.8151525989508822, + "TN": 1408984, + "TP": 13675, + "n_pred": 15383, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9716233565009518, + "FN": 752, + "FP": 530, + "IoU": 0.9448127421437796, + "TN": 1402530, + "TP": 21948, + "n_pred": 22478, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9249175378766702, + "FN": 986, + "FP": 357, + "IoU": 0.8603224128965159, + "TN": 752433, + "TP": 8272, + "n_pred": 8629, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8724323747532412, + "FN": 1234, + "FP": 1157, + "IoU": 0.7737295353458882, + "TN": 751481, + "TP": 8176, + "n_pred": 9333, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9703063333959782, + "FN": 527, + "FP": 421, + "IoU": 0.9423252418324511, + "TN": 745611, + "TP": 15489, + "n_pred": 15910, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8170373478808225, + "FN": 1024, + "FP": 720, + "IoU": 0.6906704505143668, + "TN": 756410, + "TP": 3894, + "n_pred": 4614, + "n_ref": 4918 + }, + "2": { + "Dice": 0.7879340111260311, + "FN": 3023, + "FP": 1399, + "IoU": 0.6500751760702699, + "TN": 749411, + "TP": 8215, + "n_pred": 9614, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9382825681555812, + "FN": 1346, + "FP": 44, + "IoU": 0.883740381398461, + "TN": 750092, + "TP": 10566, + "n_pred": 10610, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9530117378665783, + "FN": 894, + "FP": 383, + "IoU": 0.9102410908835313, + "TN": 1064045, + "TP": 12950, + "n_pred": 13333, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8794887401095557, + "FN": 1200, + "FP": 1176, + "IoU": 0.7848995111352526, + "TN": 1067226, + "TP": 8670, + "n_pred": 9846, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9736885471024443, + "FN": 678, + "FP": 280, + "IoU": 0.948726182830229, + "TN": 1059588, + "TP": 17726, + "n_pred": 18006, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9496061211413064, + "FN": 699, + "FP": 638, + "IoU": 0.9040476532223338, + "TN": 1064338, + "TP": 12597, + "n_pred": 13235, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8675153686044823, + "FN": 1839, + "FP": 898, + "IoU": 0.7660283809198154, + "TN": 1066574, + "TP": 8961, + "n_pred": 9859, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9587410737900026, + "FN": 726, + "FP": 522, + "IoU": 0.920751841503683, + "TN": 1062524, + "TP": 14500, + "n_pred": 15022, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.894506001846722, + "FN": 1382, + "FP": 446, + "IoU": 0.8091459594904991, + "TN": 1096342, + "TP": 7750, + "n_pred": 8196, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8478534823153827, + "FN": 1390, + "FP": 2232, + "IoU": 0.7358903310485635, + "TN": 1092206, + "TP": 10092, + "n_pred": 12324, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9045537495225565, + "FN": 839, + "FP": 1410, + "IoU": 0.8257399659073299, + "TN": 1093014, + "TP": 10657, + "n_pred": 12067, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8684795621686335, + "FN": 513, + "FP": 256, + "IoU": 0.7675332527206772, + "TN": 1102612, + "TP": 2539, + "n_pred": 2795, + "n_ref": 3052 + }, + "2": { + "Dice": 0.86886056686323, + "FN": 933, + "FP": 2514, + "IoU": 0.7681286156329881, + "TN": 1091054, + "TP": 11419, + "n_pred": 13933, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7906663069867818, + "FN": 349, + "FP": 1203, + "IoU": 0.6538032567477136, + "TN": 1101437, + "TP": 2931, + "n_pred": 4134, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8391839735342768, + "FN": 2315, + "FP": 310, + "IoU": 0.7229259024699176, + "TN": 1137406, + "TP": 6849, + "n_pred": 7159, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9134949854005332, + "FN": 1427, + "FP": 1980, + "IoU": 0.8407646289025986, + "TN": 1125484, + "TP": 17989, + "n_pred": 19969, + "n_ref": 19416 + }, + "3": { + "Dice": 0.929725434801801, + "FN": 1399, + "FP": 193, + "IoU": 0.8686793697929556, + "TN": 1134757, + "TP": 10531, + "n_pred": 10724, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6575038794058967, + "FN": 983, + "FP": 562, + "IoU": 0.48976221928665786, + "TN": 1143852, + "TP": 1483, + "n_pred": 2045, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8291054455761339, + "FN": 4940, + "FP": 3097, + "IoU": 0.7080957396578651, + "TN": 1119347, + "TP": 19496, + "n_pred": 22593, + "n_ref": 24436 + }, + "3": { + "Dice": 0.5562955915001586, + "FN": 85, + "FP": 4112, + "IoU": 0.38532513181019334, + "TN": 1140052, + "TP": 2631, + "n_pred": 6743, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.956160081483682, + "FN": 581, + "FP": 452, + "IoU": 0.9160026020491137, + "TN": 788502, + "TP": 11265, + "n_pred": 11717, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8689783569932511, + "FN": 1166, + "FP": 1086, + "IoU": 0.768312757201646, + "TN": 791080, + "TP": 7468, + "n_pred": 8554, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9546663514392103, + "FN": 577, + "FP": 190, + "IoU": 0.9132647291643108, + "TN": 791957, + "TP": 8076, + "n_pred": 8266, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7410272942187835, + "FN": 491, + "FP": 1919, + "IoU": 0.5885967907135541, + "TN": 794942, + "TP": 3448, + "n_pred": 5367, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9038390322182447, + "FN": 1669, + "FP": 668, + "IoU": 0.8245495495495495, + "TN": 787480, + "TP": 10983, + "n_pred": 11651, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8955325293018516, + "FN": 210, + "FP": 405, + "IoU": 0.8108274377114734, + "TN": 797549, + "TP": 2636, + "n_pred": 3041, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9521895787139689, + "FN": 450, + "FP": 930, + "IoU": 0.9087422298637746, + "TN": 1332718, + "TP": 13742, + "n_pred": 14672, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8900298730395818, + "FN": 1072, + "FP": 1284, + "IoU": 0.8018502943650127, + "TN": 1335950, + "TP": 9534, + "n_pred": 10818, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9738938950540376, + "FN": 522, + "FP": 379, + "IoU": 0.9491161687468233, + "TN": 1330133, + "TP": 16806, + "n_pred": 17185, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7763736647350415, + "FN": 308, + "FP": 2895, + "IoU": 0.6344859066529728, + "TN": 1339077, + "TP": 5560, + "n_pred": 8455, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8818095980951599, + "FN": 1374, + "FP": 1505, + "IoU": 0.7886041559585872, + "TN": 1334221, + "TP": 10740, + "n_pred": 12245, + "n_ref": 12114 + }, + "3": { + "Dice": 0.955556522874679, + "FN": 642, + "FP": 379, + "IoU": 0.9148953905142952, + "TN": 1335843, + "TP": 10976, + "n_pred": 11355, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8399391939490564, + "FN": 1135, + "FP": 3182, + "IoU": 0.7240475581692661, + "TN": 836324, + "TP": 11327, + "n_pred": 14509, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8557213930348259, + "FN": 1192, + "FP": 1592, + "IoU": 0.7478260869565218, + "TN": 840928, + "TP": 8256, + "n_pred": 9848, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9714317017721658, + "FN": 755, + "FP": 288, + "IoU": 0.9444503621644653, + "TN": 833192, + "TP": 17733, + "n_pred": 18021, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8532001941612926, + "FN": 786, + "FP": 1331, + "IoU": 0.7439835530293869, + "TN": 843699, + "TP": 6152, + "n_pred": 7483, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8675603217158177, + "FN": 1584, + "FP": 1380, + "IoU": 0.7660984848484849, + "TN": 839296, + "TP": 9708, + "n_pred": 11088, + "n_ref": 11292 + }, + "3": { + "Dice": 0.955384311400909, + "FN": 908, + "FP": 221, + "IoU": 0.9145797079518801, + "TN": 838751, + "TP": 12088, + "n_pred": 12309, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8884191985909291, + "FN": 812, + "FP": 455, + "IoU": 0.7992394232292822, + "TN": 845657, + "TP": 5044, + "n_pred": 5499, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8644794482244385, + "FN": 1445, + "FP": 1463, + "IoU": 0.7613067388984651, + "TN": 839785, + "TP": 9275, + "n_pred": 10738, + "n_ref": 10720 + }, + "3": { + "Dice": 0.945043408035534, + "FN": 1254, + "FP": 107, + "IoU": 0.895812600474623, + "TN": 838905, + "TP": 11702, + "n_pred": 11809, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8202664337191526, + "FN": 226, + "FP": 597, + "IoU": 0.6952980377637912, + "TN": 849267, + "TP": 1878, + "n_pred": 2475, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8926700507614214, + "FN": 1595, + "FP": 1048, + "IoU": 0.8061463987091095, + "TN": 838334, + "TP": 10991, + "n_pred": 12039, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9470111040791669, + "FN": 516, + "FP": 405, + "IoU": 0.8993552617200306, + "TN": 842817, + "TP": 8230, + "n_pred": 8635, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.872678149273894, + "FN": 2752, + "FP": 264, + "IoU": 0.7741162372678251, + "TN": 783688, + "TP": 10336, + "n_pred": 10600, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8273867975995636, + "FN": 1271, + "FP": 1893, + "IoU": 0.7055922583046431, + "TN": 786293, + "TP": 7583, + "n_pred": 9476, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9489006358691489, + "FN": 1072, + "FP": 262, + "IoU": 0.9027696793002915, + "TN": 783320, + "TP": 12386, + "n_pred": 12648, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8840641407691217, + "FN": 1438, + "FP": 196, + "IoU": 0.7922177009155646, + "TN": 789176, + "TP": 6230, + "n_pred": 6426, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8664618535586277, + "FN": 1161, + "FP": 1447, + "IoU": 0.7643870268316921, + "TN": 785971, + "TP": 8461, + "n_pred": 9908, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9398496240601504, + "FN": 782, + "FP": 274, + "IoU": 0.8865248226950354, + "TN": 787734, + "TP": 8250, + "n_pred": 8524, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9059995142093757, + "FN": 1278, + "FP": 1044, + "IoU": 0.8281527531083481, + "TN": 883158, + "TP": 11190, + "n_pred": 12234, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8650751717181421, + "FN": 1333, + "FP": 1476, + "IoU": 0.7622312510580667, + "TN": 884856, + "TP": 9005, + "n_pred": 10481, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9477940879129767, + "FN": 533, + "FP": 758, + "IoU": 0.9007686395080707, + "TN": 883660, + "TP": 11719, + "n_pred": 12477, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7931766242246164, + "FN": 1497, + "FP": 1037, + "IoU": 0.6572433382929799, + "TN": 889277, + "TP": 4859, + "n_pred": 5896, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8937464690800052, + "FN": 1235, + "FP": 1210, + "IoU": 0.8079038340666248, + "TN": 883942, + "TP": 10283, + "n_pred": 11493, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9218805651193162, + "FN": 1061, + "FP": 255, + "IoU": 0.855082039422971, + "TN": 887589, + "TP": 7765, + "n_pred": 8020, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9624461135060663, + "FN": 392, + "FP": 453, + "IoU": 0.9276107256060996, + "TN": 750375, + "TP": 10828, + "n_pred": 11281, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9169425366865952, + "FN": 1133, + "FP": 548, + "IoU": 0.8466240875912409, + "TN": 751088, + "TP": 9279, + "n_pred": 9827, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9736241440527517, + "FN": 235, + "FP": 389, + "IoU": 0.9486039041265135, + "TN": 749907, + "TP": 11517, + "n_pred": 11906, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8766541822721599, + "FN": 281, + "FP": 707, + "IoU": 0.7803956434763281, + "TN": 757549, + "TP": 3511, + "n_pred": 4218, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8777348777348777, + "FN": 1743, + "FP": 1012, + "IoU": 0.7821100917431193, + "TN": 749404, + "TP": 9889, + "n_pred": 10901, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9339028776978417, + "FN": 603, + "FP": 279, + "IoU": 0.8760016870518769, + "TN": 754935, + "TP": 6231, + "n_pred": 6510, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8412594293210889, + "FN": 247, + "FP": 2657, + "IoU": 0.7260118879139541, + "TN": 984729, + "TP": 7695, + "n_pred": 10352, + "n_ref": 7942 + }, + "2": { + "Dice": 0.850091802570472, + "FN": 877, + "FP": 1899, + "IoU": 0.7392692777308162, + "TN": 984681, + "TP": 7871, + "n_pred": 9770, + "n_ref": 8748 + }, + "3": { + "Dice": 0.973109044601078, + "FN": 117, + "FP": 791, + "IoU": 0.9476264636326931, + "TN": 977991, + "TP": 16429, + "n_pred": 17220, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6998390889961629, + "FN": 415, + "FP": 2010, + "IoU": 0.5382711348057883, + "TN": 990076, + "TP": 2827, + "n_pred": 4837, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8367026177442957, + "FN": 615, + "FP": 2398, + "IoU": 0.7192508386134924, + "TN": 984596, + "TP": 7719, + "n_pred": 10117, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9249900429260521, + "FN": 163, + "FP": 1532, + "IoU": 0.8604478840770624, + "TN": 983182, + "TP": 10451, + "n_pred": 11983, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9477635726174877, + "FN": 943, + "FP": 532, + "IoU": 0.9007135164243404, + "TN": 743160, + "TP": 13381, + "n_pred": 13913, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9057124777081056, + "FN": 940, + "FP": 699, + "IoU": 0.8276732204815477, + "TN": 748505, + "TP": 7872, + "n_pred": 8571, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9763655462184874, + "FN": 148, + "FP": 392, + "IoU": 0.9538224730631093, + "TN": 746322, + "TP": 11154, + "n_pred": 11546, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7497056349873844, + "FN": 779, + "FP": 2197, + "IoU": 0.5996233014933405, + "TN": 750583, + "TP": 4457, + "n_pred": 6654, + "n_ref": 5236 + }, + "2": { + "Dice": 0.9162058698426202, + "FN": 716, + "FP": 860, + "IoU": 0.8453689167974883, + "TN": 747824, + "TP": 8616, + "n_pred": 9476, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9221176182907446, + "FN": 421, + "FP": 216, + "IoU": 0.8554900181488203, + "TN": 753608, + "TP": 3771, + "n_pred": 3987, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.945650760629307, + "FN": 673, + "FP": 163, + "IoU": 0.8969046738192132, + "TN": 630867, + "TP": 7273, + "n_pred": 7436, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8896790663749088, + "FN": 487, + "FP": 723, + "IoU": 0.8012809985219248, + "TN": 632887, + "TP": 4879, + "n_pred": 5602, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9592436974789916, + "FN": 485, + "FP": 97, + "IoU": 0.9216794509487283, + "TN": 631545, + "TP": 6849, + "n_pred": 6946, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7562674094707521, + "FN": 305, + "FP": 1445, + "IoU": 0.6080627099664053, + "TN": 634511, + "TP": 2715, + "n_pred": 4160, + "n_ref": 3020 + }, + "2": { + "Dice": 0.928015298456495, + "FN": 558, + "FP": 496, + "IoU": 0.8656982670744139, + "TN": 631128, + "TP": 6794, + "n_pred": 7290, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9218122031421264, + "FN": 233, + "FP": 195, + "IoU": 0.8549644188410708, + "TN": 636025, + "TP": 2523, + "n_pred": 2718, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9278357547234158, + "FN": 1837, + "FP": 279, + "IoU": 0.8653858387938164, + "TN": 967321, + "TP": 13603, + "n_pred": 13882, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8843551156448843, + "FN": 1140, + "FP": 1150, + "IoU": 0.7926851348904581, + "TN": 971994, + "TP": 8756, + "n_pred": 9906, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9724084293174327, + "FN": 90, + "FP": 655, + "IoU": 0.9462985655589995, + "TN": 969167, + "TP": 13128, + "n_pred": 13783, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9207271519880468, + "FN": 642, + "FP": 313, + "IoU": 0.8530995231502846, + "TN": 976539, + "TP": 5546, + "n_pred": 5859, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9214765439579862, + "FN": 832, + "FP": 723, + "IoU": 0.8543871148983987, + "TN": 972361, + "TP": 9124, + "n_pred": 9847, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9426741130091985, + "FN": 251, + "FP": 447, + "IoU": 0.8915643933509398, + "TN": 976603, + "TP": 5739, + "n_pred": 6186, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9521826938014603, + "FN": 857, + "FP": 682, + "IoU": 0.9087296880559839, + "TN": 1031714, + "TP": 15323, + "n_pred": 16005, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8988216632676184, + "FN": 775, + "FP": 1011, + "IoU": 0.816236238296121, + "TN": 1038857, + "TP": 7933, + "n_pred": 8944, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9704122746326971, + "FN": 338, + "FP": 389, + "IoU": 0.9425251007984821, + "TN": 1035927, + "TP": 11922, + "n_pred": 12311, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8851535355432435, + "FN": 717, + "FP": 506, + "IoU": 0.7939690026954178, + "TN": 1042640, + "TP": 4713, + "n_pred": 5219, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8731492597038816, + "FN": 1594, + "FP": 942, + "IoU": 0.7748579545454546, + "TN": 1037312, + "TP": 8728, + "n_pred": 9670, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9413772334872516, + "FN": 391, + "FP": 193, + "IoU": 0.8892471079082116, + "TN": 1043303, + "TP": 4689, + "n_pred": 4882, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9278137613817704, + "FN": 1278, + "FP": 260, + "IoU": 0.8653475748555419, + "TN": 477794, + "TP": 9884, + "n_pred": 10144, + "n_ref": 11162 + }, + "2": { + "Dice": 0.8088004190675746, + "FN": 401, + "FP": 694, + "IoU": 0.6789797713280563, + "TN": 485805, + "TP": 2316, + "n_pred": 3010, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9609673313534154, + "FN": 121, + "FP": 247, + "IoU": 0.9248672927725602, + "TN": 484318, + "TP": 4530, + "n_pred": 4777, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9099289118037653, + "FN": 827, + "FP": 326, + "IoU": 0.834742726100043, + "TN": 482239, + "TP": 5824, + "n_pred": 6150, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8473500476039353, + "FN": 690, + "FP": 272, + "IoU": 0.7351321585903083, + "TN": 485584, + "TP": 2670, + "n_pred": 2942, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8693682355902341, + "FN": 63, + "FP": 456, + "IoU": 0.7689225289403384, + "TN": 486970, + "TP": 1727, + "n_pred": 2183, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9289277615808228, + "FN": 1538, + "FP": 656, + "IoU": 0.8672876844906847, + "TN": 463948, + "TP": 14338, + "n_pred": 14994, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8154167124190184, + "FN": 806, + "FP": 875, + "IoU": 0.6883574341861327, + "TN": 475086, + "TP": 3713, + "n_pred": 4588, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9526538213595015, + "FN": 310, + "FP": 351, + "IoU": 0.9095882916153741, + "TN": 473169, + "TP": 6650, + "n_pred": 7001, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8853338265211762, + "FN": 2037, + "FP": 443, + "IoU": 0.7942591670814667, + "TN": 468426, + "TP": 9574, + "n_pred": 10017, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8204373835441796, + "FN": 1479, + "FP": 352, + "IoU": 0.6955437312936481, + "TN": 474466, + "TP": 4183, + "n_pred": 4535, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8858447488584474, + "FN": 90, + "FP": 610, + "IoU": 0.7950819672131147, + "TN": 477064, + "TP": 2716, + "n_pred": 3326, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9000236226672617, + "FN": 3527, + "FP": 282, + "IoU": 0.8182208647513601, + "TN": 623686, + "TP": 17145, + "n_pred": 17427, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8123239833277008, + "FN": 1855, + "FP": 1477, + "IoU": 0.6839609219387272, + "TN": 634097, + "TP": 7211, + "n_pred": 8688, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9504566635601118, + "FN": 1250, + "FP": 79, + "IoU": 0.9055906798323506, + "TN": 630563, + "TP": 12748, + "n_pred": 12827, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8229965939289591, + "FN": 4338, + "FP": 391, + "IoU": 0.6992304267633404, + "TN": 628917, + "TP": 10994, + "n_pred": 11385, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8640905473516668, + "FN": 2394, + "FP": 680, + "IoU": 0.7607037210026467, + "TN": 631794, + "TP": 9772, + "n_pred": 10452, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9373246024321796, + "FN": 548, + "FP": 390, + "IoU": 0.8820422535211268, + "TN": 636688, + "TP": 7014, + "n_pred": 7404, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8842682140554481, + "FN": 2851, + "FP": 2175, + "IoU": 0.7925455070788789, + "TN": 540253, + "TP": 19201, + "n_pred": 21376, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7826390505003491, + "FN": 1106, + "FP": 762, + "IoU": 0.6428981074364366, + "TN": 559249, + "TP": 3363, + "n_pred": 4125, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9543694865773942, + "FN": 378, + "FP": 341, + "IoU": 0.9127215343529983, + "TN": 556242, + "TP": 7519, + "n_pred": 7860, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.715348339734552, + "FN": 1075, + "FP": 4780, + "IoU": 0.5568422646079322, + "TN": 551268, + "TP": 7357, + "n_pred": 12137, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8634913884754412, + "FN": 802, + "FP": 482, + "IoU": 0.7597754911131899, + "TN": 559135, + "TP": 4061, + "n_pred": 4543, + "n_ref": 4863 + }, + "3": { + "Dice": 0.9356940509915014, + "FN": 149, + "FP": 305, + "IoU": 0.8791589033803566, + "TN": 560723, + "TP": 3303, + "n_pred": 3608, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8987972299842061, + "FN": 177, + "FP": 1489, + "IoU": 0.8161959399823477, + "TN": 409816, + "TP": 7398, + "n_pred": 8887, + "n_ref": 7575 + }, + "2": { + "Dice": 0.5542611894543225, + "FN": 1500, + "FP": 681, + "IoU": 0.3833757421543681, + "TN": 415343, + "TP": 1356, + "n_pred": 2037, + "n_ref": 2856 + }, + "3": { + "Dice": 0.8667326950588753, + "FN": 261, + "FP": 950, + "IoU": 0.7648087007185861, + "TN": 413731, + "TP": 3938, + "n_pred": 4888, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7961566091954023, + "FN": 304, + "FP": 1966, + "IoU": 0.661345666119648, + "TN": 412177, + "TP": 4433, + "n_pred": 6399, + "n_ref": 4737 + }, + "2": { + "Dice": 0.5725305335333191, + "FN": 1657, + "FP": 338, + "IoU": 0.4010807565295707, + "TN": 415549, + "TP": 1336, + "n_pred": 1674, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8342971086739781, + "FN": 291, + "FP": 540, + "IoU": 0.7157030448169689, + "TN": 415957, + "TP": 2092, + "n_pred": 2632, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9462627711059329, + "FN": 368, + "FP": 1131, + "IoU": 0.8980063958631013, + "TN": 481813, + "TP": 13198, + "n_pred": 14329, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8941113987917414, + "FN": 938, + "FP": 657, + "IoU": 0.8085004202185136, + "TN": 488181, + "TP": 6734, + "n_pred": 7391, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9617866632924206, + "FN": 171, + "FP": 433, + "IoU": 0.9263863497867154, + "TN": 488305, + "TP": 7601, + "n_pred": 8034, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9375611960533253, + "FN": 814, + "FP": 844, + "IoU": 0.8824613639585992, + "TN": 482404, + "TP": 12448, + "n_pred": 13292, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8991187526961237, + "FN": 1181, + "FP": 456, + "IoU": 0.8167263770712047, + "TN": 487578, + "TP": 7295, + "n_pred": 7751, + "n_ref": 8476 + }, + "3": { + "Dice": 0.9206570155902004, + "FN": 93, + "FP": 477, + "IoU": 0.8529791075573897, + "TN": 492633, + "TP": 3307, + "n_pred": 3784, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_003/summary_cross_val.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_003/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..5c254ede5dba7e51c2d840ef644a50d4becddaa5 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_003/summary_cross_val.json @@ -0,0 +1,4848 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8336370124461028, + "FN": 180.74358974358972, + "FP": 151.2820512820513, + "IoU": 0.7552300340263752, + "TN": 9545.884615384615, + "TP": 1199.0128205128206, + "n_pred": 1350.2948717948718, + "n_ref": 1379.7564102564102 + }, + "mean": { + "1": { + "Dice": 0.7195550439051899, + "FN": 251.65384615384616, + "FP": 189.84615384615384, + "IoU": 0.6385527573627281, + "TN": 9110.615384615385, + "TP": 1524.8076923076924, + "n_pred": 1714.6538461538462, + "n_ref": 1776.4615384615386 + }, + "2": { + "Dice": 0.8769364943877985, + "FN": 226.80769230769232, + "FP": 113.73076923076923, + "IoU": 0.7862058715466359, + "TN": 9676.26923076923, + "TP": 1060.1153846153845, + "n_pred": 1173.8461538461538, + "n_ref": 1286.923076923077 + }, + "3": { + "Dice": 0.9044194990453202, + "FN": 63.76923076923077, + "FP": 150.26923076923077, + "IoU": 0.8409314731697619, + "TN": 9850.76923076923, + "TP": 1012.1153846153846, + "n_pred": 1162.3846153846155, + "n_ref": 1075.8846153846155 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9368127840492596, + "FN": 57, + "FP": 374, + "IoU": 0.8811362382790954, + "TN": 9174, + "TP": 3195, + "n_pred": 3569, + "n_ref": 3252 + }, + "2": { + "Dice": 0.7268623024830699, + "FN": 255, + "FP": 108, + "IoU": 0.5709219858156028, + "TN": 11954, + "TP": 483, + "n_pred": 591, + "n_ref": 738 + }, + "3": { + "Dice": 0.95908111988514, + "FN": 108, + "FP": 6, + "IoU": 0.9213793103448276, + "TN": 11350, + "TP": 1336, + "n_pred": 1342, + "n_ref": 1444 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.983149708360337, + "FN": 115, + "FP": 41, + "IoU": 0.9668578712555768, + "TN": 1693, + "TP": 4551, + "n_pred": 4592, + "n_ref": 4666 + }, + "2": { + "Dice": 0.9128205128205128, + "FN": 39, + "FP": 46, + "IoU": 0.839622641509434, + "TN": 5870, + "TP": 445, + "n_pred": 491, + "n_ref": 484 + }, + "3": { + "Dice": 0.9824024483550114, + "FN": 4, + "FP": 19, + "IoU": 0.9654135338345865, + "TN": 5735, + "TP": 642, + "n_pred": 661, + "n_ref": 646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9375462326957624, + "FN": 447, + "FP": 144, + "IoU": 0.8824348518002785, + "TN": 7773, + "TP": 4436, + "n_pred": 4580, + "n_ref": 4883 + }, + "2": { + "Dice": 0.8886035313001606, + "FN": 155, + "FP": 192, + "IoU": 0.7995378393991912, + "TN": 11069, + "TP": 1384, + "n_pred": 1576, + "n_ref": 1539 + }, + "3": { + "Dice": 0.9736070381231672, + "FN": 86, + "FP": 49, + "IoU": 0.9485714285714286, + "TN": 10175, + "TP": 2490, + "n_pred": 2539, + "n_ref": 2576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.966693312017053, + "FN": 196, + "FP": 54, + "IoU": 0.9355337802991233, + "TN": 8922, + "TP": 3628, + "n_pred": 3682, + "n_ref": 3824 + }, + "2": { + "Dice": 0.8973655323819978, + "FN": 242, + "FP": 132, + "IoU": 0.8138377302140368, + "TN": 10791, + "TP": 1635, + "n_pred": 1767, + "n_ref": 1877 + }, + "3": { + "Dice": 0.9781277340332458, + "FN": 13, + "FP": 162, + "IoU": 0.9571917808219178, + "TN": 8712, + "TP": 3913, + "n_pred": 4075, + "n_ref": 3926 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6288526288526288, + "FN": 1388, + "FP": 45, + "IoU": 0.45863241405364563, + "TN": 10153, + "TP": 1214, + "n_pred": 1259, + "n_ref": 2602 + }, + "2": { + "Dice": 0.9253867151956324, + "FN": 147, + "FP": 17, + "IoU": 0.8611346316680779, + "TN": 11619, + "TP": 1017, + "n_pred": 1034, + "n_ref": 1164 + }, + "3": { + "Dice": 0.9932027189124351, + "FN": 14, + "FP": 20, + "IoU": 0.9864972200158856, + "TN": 10282, + "TP": 2484, + "n_pred": 2504, + "n_ref": 2498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8558246828143022, + "FN": 34, + "FP": 466, + "IoU": 0.7479838709677419, + "TN": 4416, + "TP": 1484, + "n_pred": 1950, + "n_ref": 1518 + }, + "2": { + "Dice": 0.9487485101311085, + "FN": 37, + "FP": 49, + "IoU": 0.9024943310657596, + "TN": 5518, + "TP": 796, + "n_pred": 845, + "n_ref": 833 + }, + "3": { + "Dice": 0.9588235294117647, + "FN": 6, + "FP": 8, + "IoU": 0.9209039548022598, + "TN": 6223, + "TP": 163, + "n_pred": 171, + "n_ref": 169 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 72, + "IoU": 0.0, + "TN": 12728, + "TP": 0, + "n_pred": 72, + "n_ref": 0 + }, + "2": { + "Dice": 0.8933161953727506, + "FN": 302, + "FP": 30, + "IoU": 0.8072009291521487, + "TN": 11078, + "TP": 1390, + "n_pred": 1420, + "n_ref": 1692 + }, + "3": { + "Dice": 0.8226181254841208, + "FN": 179, + "FP": 50, + "IoU": 0.6986842105263158, + "TN": 12040, + "TP": 531, + "n_pred": 581, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6555873925501433, + "FN": 484, + "FP": 117, + "IoU": 0.4876385336743393, + "TN": 18027, + "TP": 572, + "n_pred": 689, + "n_ref": 1056 + }, + "2": { + "Dice": 0.806443879752601, + "FN": 3122, + "FP": 915, + "IoU": 0.675664818831847, + "TN": 6753, + "TP": 8410, + "n_pred": 9325, + "n_ref": 11532 + }, + "3": { + "Dice": 0.626550058739068, + "FN": 154, + "FP": 2707, + "IoU": 0.45618703668504085, + "TN": 13939, + "TP": 2400, + "n_pred": 5107, + "n_ref": 2554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 288, + "IoU": 0.0, + "TN": 18912, + "TP": 0, + "n_pred": 288, + "n_ref": 0 + }, + "2": { + "Dice": 0.902291917973462, + "FN": 36, + "FP": 45, + "IoU": 0.8219780219780219, + "TN": 18745, + "TP": 374, + "n_pred": 419, + "n_ref": 410 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9207843137254902, + "FN": 66, + "FP": 35, + "IoU": 0.8531976744186046, + "TN": 18512, + "TP": 587, + "n_pred": 622, + "n_ref": 653 + }, + "2": { + "Dice": 0.8981711447279296, + "FN": 467, + "FP": 435, + "IoU": 0.8151639344262295, + "TN": 14320, + "TP": 3978, + "n_pred": 4413, + "n_ref": 4445 + }, + "3": { + "Dice": 0.7718204488778054, + "FN": 185, + "FP": 181, + "IoU": 0.6284263959390863, + "TN": 18215, + "TP": 619, + "n_pred": 800, + "n_ref": 804 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8850411581038887, + "FN": 80, + "FP": 730, + "IoU": 0.7937881873727087, + "TN": 2472, + "TP": 3118, + "n_pred": 3848, + "n_ref": 3198 + }, + "2": { + "Dice": 0.9311475409836065, + "FN": 6, + "FP": 15, + "IoU": 0.8711656441717791, + "TN": 6237, + "TP": 142, + "n_pred": 157, + "n_ref": 148 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.875, + "FN": 876, + "FP": 180, + "IoU": 0.7777777777777778, + "TN": 1648, + "TP": 3696, + "n_pred": 3876, + "n_ref": 4572 + }, + "2": { + "Dice": 0.8830769230769231, + "FN": 54, + "FP": 98, + "IoU": 0.790633608815427, + "TN": 5674, + "TP": 574, + "n_pred": 672, + "n_ref": 628 + }, + "3": { + "Dice": 0.964221824686941, + "FN": 37, + "FP": 3, + "IoU": 0.9309153713298791, + "TN": 5821, + "TP": 539, + "n_pred": 542, + "n_ref": 576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5901639344262295, + "FN": 6, + "FP": 19, + "IoU": 0.4186046511627907, + "TN": 6357, + "TP": 18, + "n_pred": 37, + "n_ref": 24 + }, + "2": { + "Dice": 0.9129916567342073, + "FN": 156, + "FP": 136, + "IoU": 0.8399122807017544, + "TN": 4576, + "TP": 1532, + "n_pred": 1668, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9781838949171902, + "FN": 126, + "FP": 65, + "IoU": 0.9572993516655488, + "TN": 1927, + "TP": 4282, + "n_pred": 4347, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8870788596815994, + "FN": 226, + "FP": 79, + "IoU": 0.7970725216234198, + "TN": 11297, + "TP": 1198, + "n_pred": 1277, + "n_ref": 1424 + }, + "2": { + "Dice": 0.927289896128423, + "FN": 86, + "FP": 68, + "IoU": 0.8644366197183099, + "TN": 11664, + "TP": 982, + "n_pred": 1050, + "n_ref": 1068 + }, + "3": { + "Dice": 0.9780096906448006, + "FN": 38, + "FP": 21, + "IoU": 0.9569657184536834, + "TN": 11429, + "TP": 1312, + "n_pred": 1333, + "n_ref": 1350 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7668623111709805, + "FN": 233, + "FP": 2190, + "IoU": 0.6218789013732834, + "TN": 6392, + "TP": 3985, + "n_pred": 6175, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8731103985341273, + "FN": 126, + "FP": 151, + "IoU": 0.7747967479674797, + "TN": 11570, + "TP": 953, + "n_pred": 1104, + "n_ref": 1079 + }, + "3": { + "Dice": 0.9195258889582034, + "FN": 114, + "FP": 15, + "IoU": 0.851039260969977, + "TN": 11934, + "TP": 737, + "n_pred": 752, + "n_ref": 851 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 24, + "IoU": 0.0, + "TN": 6376, + "TP": 0, + "n_pred": 24, + "n_ref": 0 + }, + "2": { + "Dice": 0.6859504132231405, + "FN": 78, + "FP": 226, + "IoU": 0.5220125786163522, + "TN": 5764, + "TP": 332, + "n_pred": 558, + "n_ref": 410 + }, + "3": { + "Dice": 0.7048224695283519, + "FN": 15, + "FP": 542, + "IoU": 0.544189852700491, + "TN": 5178, + "TP": 665, + "n_pred": 1207, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.931161324224908, + "FN": 83, + "FP": 48, + "IoU": 0.8711897738446411, + "TN": 5383, + "TP": 886, + "n_pred": 934, + "n_ref": 969 + }, + "3": { + "Dice": 0.9809663250366032, + "FN": 25, + "FP": 27, + "IoU": 0.9626436781609196, + "TN": 5008, + "TP": 1340, + "n_pred": 1367, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7823008849557522, + "FN": 713, + "FP": 25, + "IoU": 0.6424418604651163, + "TN": 10736, + "TP": 1326, + "n_pred": 1351, + "n_ref": 2039 + }, + "2": { + "Dice": 0.8746803069053708, + "FN": 108, + "FP": 88, + "IoU": 0.7772727272727272, + "TN": 11920, + "TP": 684, + "n_pred": 772, + "n_ref": 792 + }, + "3": { + "Dice": 0.9123237277743715, + "FN": 135, + "FP": 8, + "IoU": 0.8387824126268321, + "TN": 11913, + "TP": 744, + "n_pred": 752, + "n_ref": 879 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9376053962900506, + "FN": 24, + "FP": 13, + "IoU": 0.8825396825396825, + "TN": 6085, + "TP": 278, + "n_pred": 291, + "n_ref": 302 + }, + "2": { + "Dice": 0.8340040241448692, + "FN": 221, + "FP": 109, + "IoU": 0.7152717860224331, + "TN": 5241, + "TP": 829, + "n_pred": 938, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9610747502583534, + "FN": 109, + "FP": 4, + "IoU": 0.9250663129973474, + "TN": 4892, + "TP": 1395, + "n_pred": 1399, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9668953176260066, + "FN": 194, + "FP": 28, + "IoU": 0.9359122401847575, + "TN": 2936, + "TP": 3242, + "n_pred": 3270, + "n_ref": 3436 + }, + "2": { + "Dice": 0.9004329004329005, + "FN": 8, + "FP": 15, + "IoU": 0.8188976377952756, + "TN": 6273, + "TP": 104, + "n_pred": 119, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8149019607843138, + "FN": 1404, + "FP": 12, + "IoU": 0.6876240900066182, + "TN": 8267, + "TP": 3117, + "n_pred": 3129, + "n_ref": 4521 + }, + "2": { + "Dice": 0.8618107556160653, + "FN": 169, + "FP": 34, + "IoU": 0.757177033492823, + "TN": 11964, + "TP": 633, + "n_pred": 667, + "n_ref": 802 + }, + "3": { + "Dice": 0.8141891891891891, + "FN": 310, + "FP": 20, + "IoU": 0.6866096866096866, + "TN": 11747, + "TP": 723, + "n_pred": 743, + "n_ref": 1033 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8431199492424587, + "FN": 125.94871794871796, + "FP": 110.79487179487178, + "IoU": 0.7693511819317185, + "TN": 10542.782051282053, + "TP": 1035.8589743589744, + "n_pred": 1146.6538461538462, + "n_ref": 1161.8076923076922 + }, + "mean": { + "1": { + "Dice": 0.7840576849875124, + "FN": 159.65384615384616, + "FP": 194.1153846153846, + "IoU": 0.710247801208252, + "TN": 10169.0, + "TP": 1292.6153846153845, + "n_pred": 1486.7307692307693, + "n_ref": 1452.2692307692307 + }, + "2": { + "Dice": 0.8163199589278697, + "FN": 136.96153846153845, + "FP": 97.57692307692308, + "IoU": 0.7253957174234837, + "TN": 10813.0, + "TP": 767.8461538461538, + "n_pred": 865.4230769230769, + "n_ref": 904.8076923076923 + }, + "3": { + "Dice": 0.9289822038119941, + "FN": 81.23076923076923, + "FP": 40.69230769230769, + "IoU": 0.8724100271634198, + "TN": 10646.346153846154, + "TP": 1047.1153846153845, + "n_pred": 1087.8076923076924, + "n_ref": 1128.3461538461538 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9210981944100916, + "FN": 240, + "FP": 79, + "IoU": 0.8537368179734067, + "TN": 10619, + "TP": 1862, + "n_pred": 1941, + "n_ref": 2102 + }, + "2": { + "Dice": 0.9037037037037037, + "FN": 24, + "FP": 28, + "IoU": 0.8243243243243243, + "TN": 12504, + "TP": 244, + "n_pred": 272, + "n_ref": 268 + }, + "3": { + "Dice": 0.8947368421052632, + "FN": 20, + "FP": 4, + "IoU": 0.8095238095238095, + "TN": 12674, + "TP": 102, + "n_pred": 106, + "n_ref": 122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9775130305286671, + "FN": 116, + "FP": 35, + "IoU": 0.9560151471016604, + "TN": 9367, + "TP": 3282, + "n_pred": 3317, + "n_ref": 3398 + }, + "2": { + "Dice": 0.7368716652625666, + "FN": 794, + "FP": 143, + "IoU": 0.5833703868385949, + "TN": 10551, + "TP": 1312, + "n_pred": 1455, + "n_ref": 2106 + }, + "3": { + "Dice": 0.9079637577491655, + "FN": 752, + "FP": 20, + "IoU": 0.8314410480349345, + "TN": 8220, + "TP": 3808, + "n_pred": 3828, + "n_ref": 4560 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9153685189490816, + "FN": 349, + "FP": 379, + "IoU": 0.8439442658092176, + "TN": 14535, + "TP": 3937, + "n_pred": 4316, + "n_ref": 4286 + }, + "2": { + "Dice": 0.8828405636916276, + "FN": 467, + "FP": 381, + "IoU": 0.7902547613158546, + "TN": 15157, + "TP": 3195, + "n_pred": 3576, + "n_ref": 3662 + }, + "3": { + "Dice": 0.9688374696771785, + "FN": 176, + "FP": 158, + "IoU": 0.9395584509591024, + "TN": 13674, + "TP": 5192, + "n_pred": 5350, + "n_ref": 5368 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.845360824742268, + "FN": 7, + "FP": 8, + "IoU": 0.7321428571428571, + "TN": 6344, + "TP": 41, + "n_pred": 49, + "n_ref": 48 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7944585807181227, + "FN": 1418, + "FP": 36, + "IoU": 0.6590056285178236, + "TN": 14936, + "TP": 2810, + "n_pred": 2846, + "n_ref": 4228 + }, + "2": { + "Dice": 0.8749386954389407, + "FN": 204, + "FP": 51, + "IoU": 0.7776809067131648, + "TN": 18053, + "TP": 892, + "n_pred": 943, + "n_ref": 1096 + }, + "3": { + "Dice": 0.9500594530321046, + "FN": 27, + "FP": 57, + "IoU": 0.9048697621744054, + "TN": 18317, + "TP": 799, + "n_pred": 856, + "n_ref": 826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9520264681555004, + "FN": 95, + "FP": 253, + "IoU": 0.9084451460142068, + "TN": 8999, + "TP": 3453, + "n_pred": 3706, + "n_ref": 3548 + }, + "2": { + "Dice": 0.9142857142857143, + "FN": 74, + "FP": 61, + "IoU": 0.8421052631578947, + "TN": 11945, + "TP": 720, + "n_pred": 781, + "n_ref": 794 + }, + "3": { + "Dice": 0.971627099015634, + "FN": 45, + "FP": 4, + "IoU": 0.9448198198198198, + "TN": 11912, + "TP": 839, + "n_pred": 843, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7696289905090595, + "FN": 266, + "FP": 1, + "IoU": 0.6255259467040674, + "TN": 5687, + "TP": 446, + "n_pred": 447, + "n_ref": 712 + }, + "2": { + "Dice": 0.9325903289591947, + "FN": 298, + "FP": 77, + "IoU": 0.8736948467497474, + "TN": 3431, + "TP": 2594, + "n_pred": 2671, + "n_ref": 2892 + }, + "3": { + "Dice": 0.9622731614135626, + "FN": 31, + "FP": 127, + "IoU": 0.927289461573861, + "TN": 4227, + "TP": 2015, + "n_pred": 2142, + "n_ref": 2046 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 304, + "IoU": 0.0, + "TN": 12496, + "TP": 0, + "n_pred": 304, + "n_ref": 0 + }, + "2": { + "Dice": 0.8875255623721882, + "FN": 22, + "FP": 88, + "IoU": 0.7977941176470589, + "TN": 12256, + "TP": 434, + "n_pred": 522, + "n_ref": 456 + }, + "3": { + "Dice": 0.9541984732824428, + "FN": 8, + "FP": 16, + "IoU": 0.9124087591240876, + "TN": 12526, + "TP": 250, + "n_pred": 266, + "n_ref": 258 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9817369806204641, + "FN": 147, + "FP": 82, + "IoU": 0.9641290726817042, + "TN": 19216, + "TP": 6155, + "n_pred": 6237, + "n_ref": 6302 + }, + "2": { + "Dice": 0.8354577056778679, + "FN": 187, + "FP": 381, + "IoU": 0.7174129353233831, + "TN": 23590, + "TP": 1442, + "n_pred": 1823, + "n_ref": 1629 + }, + "3": { + "Dice": 0.9639603960396039, + "FN": 36, + "FP": 146, + "IoU": 0.9304281345565749, + "TN": 22984, + "TP": 2434, + "n_pred": 2580, + "n_ref": 2470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8952380952380953, + "FN": 117, + "FP": 323, + "IoU": 0.8103448275862069, + "TN": 10480, + "TP": 1880, + "n_pred": 2203, + "n_ref": 1997 + }, + "2": { + "Dice": 0.899812734082397, + "FN": 71, + "FP": 143, + "IoU": 0.8178723404255319, + "TN": 11625, + "TP": 961, + "n_pred": 1104, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9276105060858424, + "FN": 82, + "FP": 31, + "IoU": 0.8649940262843488, + "TN": 11963, + "TP": 724, + "n_pred": 755, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6679440505844031, + "FN": 101, + "FP": 1632, + "IoU": 0.5014384349827388, + "TN": 15724, + "TP": 1743, + "n_pred": 3375, + "n_ref": 1844 + }, + "2": { + "Dice": 0.9119945633707102, + "FN": 24, + "FP": 235, + "IoU": 0.8382261086820737, + "TN": 17599, + "TP": 1342, + "n_pred": 1577, + "n_ref": 1366 + }, + "3": { + "Dice": 0.9478357380688124, + "FN": 43, + "FP": 4, + "IoU": 0.9008438818565401, + "TN": 18726, + "TP": 427, + "n_pred": 431, + "n_ref": 470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 997, + "IoU": 0.0, + "TN": 11803, + "TP": 0, + "n_pred": 997, + "n_ref": 0 + }, + "2": { + "Dice": 0.9052848318462594, + "FN": 85, + "FP": 191, + "IoU": 0.8269592476489028, + "TN": 11205, + "TP": 1319, + "n_pred": 1510, + "n_ref": 1404 + }, + "3": { + "Dice": 0.9551795785099436, + "FN": 45, + "FP": 106, + "IoU": 0.9142045454545454, + "TN": 11040, + "TP": 1609, + "n_pred": 1715, + "n_ref": 1654 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9343015214384509, + "FN": 124, + "FP": 66, + "IoU": 0.8767034393251135, + "TN": 11259, + "TP": 1351, + "n_pred": 1417, + "n_ref": 1475 + }, + "2": { + "Dice": 0.9076803723816912, + "FN": 89, + "FP": 30, + "IoU": 0.8309659090909091, + "TN": 12096, + "TP": 585, + "n_pred": 615, + "n_ref": 674 + }, + "3": { + "Dice": 0.978021978021978, + "FN": 11, + "FP": 29, + "IoU": 0.956989247311828, + "TN": 11870, + "TP": 890, + "n_pred": 919, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9549114331723028, + "FN": 15, + "FP": 41, + "IoU": 0.9137134052388289, + "TN": 12151, + "TP": 593, + "n_pred": 634, + "n_ref": 608 + }, + "2": { + "Dice": 0.8562975486052409, + "FN": 564, + "FP": 116, + "IoU": 0.7487065779748706, + "TN": 10094, + "TP": 2026, + "n_pred": 2142, + "n_ref": 2590 + }, + "3": { + "Dice": 0.833756345177665, + "FN": 524, + "FP": 0, + "IoU": 0.7149075081610446, + "TN": 10962, + "TP": 1314, + "n_pred": 1314, + "n_ref": 1838 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8225538971807629, + "FN": 599, + "FP": 364, + "IoU": 0.6985915492957746, + "TN": 16005, + "TP": 2232, + "n_pred": 2596, + "n_ref": 2831 + }, + "2": { + "Dice": 0.83947532792005, + "FN": 452, + "FP": 319, + "IoU": 0.7233584499461787, + "TN": 16413, + "TP": 2016, + "n_pred": 2335, + "n_ref": 2468 + }, + "3": { + "Dice": 0.9673256003920928, + "FN": 202, + "FP": 198, + "IoU": 0.93671887359595, + "TN": 12879, + "TP": 5921, + "n_pred": 6119, + "n_ref": 6123 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9626288659793815, + "FN": 17, + "FP": 41, + "IoU": 0.9279503105590062, + "TN": 5595, + "TP": 747, + "n_pred": 788, + "n_ref": 764 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 6389, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8094446291985368, + "FN": 519, + "FP": 54, + "IoU": 0.6798882681564246, + "TN": 11010, + "TP": 1217, + "n_pred": 1271, + "n_ref": 1736 + }, + "2": { + "Dice": 0.69800796812749, + "FN": 182, + "FP": 197, + "IoU": 0.5361077111383109, + "TN": 11983, + "TP": 438, + "n_pred": 635, + "n_ref": 620 + }, + "3": { + "Dice": 0.9299638989169675, + "FN": 92, + "FP": 5, + "IoU": 0.8690958164642375, + "TN": 12059, + "TP": 644, + "n_pred": 649, + "n_ref": 736 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9088242483500366, + "FN": 21, + "FP": 352, + "IoU": 0.8328853046594982, + "TN": 4168, + "TP": 1859, + "n_pred": 2211, + "n_ref": 1880 + }, + "2": { + "Dice": 0.8906720160481444, + "FN": 24, + "FP": 85, + "IoU": 0.8028933092224232, + "TN": 5847, + "TP": 444, + "n_pred": 529, + "n_ref": 468 + }, + "3": { + "Dice": 0.7503649635036497, + "FN": 18, + "FP": 153, + "IoU": 0.6004672897196262, + "TN": 5972, + "TP": 257, + "n_pred": 410, + "n_ref": 275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8531740491028889, + "FN": 176.69333333333336, + "FP": 168.97333333333333, + "IoU": 0.7696493999929871, + "TN": 9810.44, + "TP": 1363.8933333333334, + "n_pred": 1532.8666666666668, + "n_ref": 1540.5866666666668 + }, + "mean": { + "1": { + "Dice": 0.7963380421775809, + "FN": 316.32, + "FP": 176.56, + "IoU": 0.7093809254854664, + "TN": 9197.72, + "TP": 1829.4, + "n_pred": 2005.96, + "n_ref": 2145.72 + }, + "2": { + "Dice": 0.8414120264136951, + "FN": 138.16, + "FP": 179.16, + "IoU": 0.7385763533624, + "TN": 10286.36, + "TP": 916.32, + "n_pred": 1095.48, + "n_ref": 1054.48 + }, + "3": { + "Dice": 0.9217720787173908, + "FN": 75.6, + "FP": 151.2, + "IoU": 0.860990921131095, + "TN": 9947.24, + "TP": 1345.96, + "n_pred": 1497.16, + "n_ref": 1421.56 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.914270211611503, + "FN": 271, + "FP": 45, + "IoU": 0.8420789605197402, + "TN": 10799, + "TP": 1685, + "n_pred": 1730, + "n_ref": 1956 + }, + "2": { + "Dice": 0.873215785054576, + "FN": 100, + "FP": 51, + "IoU": 0.7749627421758569, + "TN": 12129, + "TP": 520, + "n_pred": 571, + "n_ref": 620 + }, + "3": { + "Dice": 0.9308755760368663, + "FN": 51, + "FP": 24, + "IoU": 0.8706896551724138, + "TN": 12220, + "TP": 505, + "n_pred": 529, + "n_ref": 556 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7092024539877301, + "FN": 56, + "FP": 418, + "IoU": 0.5494296577946768, + "TN": 5348, + "TP": 578, + "n_pred": 996, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8585796387520526, + "FN": 2318, + "FP": 438, + "IoU": 0.7522028412156087, + "TN": 33678, + "TP": 8366, + "n_pred": 8804, + "n_ref": 10684 + }, + "2": { + "Dice": 0.7913450292397661, + "FN": 631, + "FP": 1153, + "IoU": 0.6547319527772402, + "TN": 39633, + "TP": 3383, + "n_pred": 4536, + "n_ref": 4014 + }, + "3": { + "Dice": 0.8578231604011173, + "FN": 219, + "FP": 2886, + "IoU": 0.7510423348300193, + "TN": 32328, + "TP": 9367, + "n_pred": 12253, + "n_ref": 9586 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9743144310708525, + "FN": 190, + "FP": 17, + "IoU": 0.9499153157512703, + "TN": 8667, + "TP": 3926, + "n_pred": 3943, + "n_ref": 4116 + }, + "2": { + "Dice": 0.9007529089664613, + "FN": 2, + "FP": 143, + "IoU": 0.8194271481942715, + "TN": 11997, + "TP": 658, + "n_pred": 801, + "n_ref": 660 + }, + "3": { + "Dice": 0.9186906019007391, + "FN": 77, + "FP": 0, + "IoU": 0.849609375, + "TN": 12288, + "TP": 435, + "n_pred": 435, + "n_ref": 512 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8842391304347826, + "FN": 131, + "FP": 295, + "IoU": 0.792498782269849, + "TN": 4347, + "TP": 1627, + "n_pred": 1922, + "n_ref": 1758 + }, + "2": { + "Dice": 0.8888888888888888, + "FN": 30, + "FP": 43, + "IoU": 0.8, + "TN": 6035, + "TP": 292, + "n_pred": 335, + "n_ref": 322 + }, + "3": { + "Dice": 0.9028571428571428, + "FN": 4, + "FP": 30, + "IoU": 0.8229166666666666, + "TN": 6208, + "TP": 158, + "n_pred": 188, + "n_ref": 162 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7255520504731862, + "FN": 0, + "FP": 174, + "IoU": 0.5693069306930693, + "TN": 5996, + "TP": 230, + "n_pred": 404, + "n_ref": 230 + }, + "2": { + "Dice": 0.8157084188911704, + "FN": 231, + "FP": 487, + "IoU": 0.6887732986562636, + "TN": 4093, + "TP": 1589, + "n_pred": 2076, + "n_ref": 1820 + }, + "3": { + "Dice": 0.9273786407766991, + "FN": 88, + "FP": 99, + "IoU": 0.8645908761766835, + "TN": 5019, + "TP": 1194, + "n_pred": 1293, + "n_ref": 1282 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9113962264150943, + "FN": 1034, + "FP": 140, + "IoU": 0.8372157515252358, + "TN": 5588, + "TP": 6038, + "n_pred": 6178, + "n_ref": 7072 + }, + "2": { + "Dice": 0.8241631396691035, + "FN": 143, + "FP": 314, + "IoU": 0.7009162303664922, + "TN": 11272, + "TP": 1071, + "n_pred": 1385, + "n_ref": 1214 + }, + "3": { + "Dice": 0.9498728659644025, + "FN": 259, + "FP": 17, + "IoU": 0.9045313040470425, + "TN": 9909, + "TP": 2615, + "n_pred": 2632, + "n_ref": 2874 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 12798, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + }, + "2": { + "Dice": 0.9155313351498637, + "FN": 122, + "FP": 95, + "IoU": 0.8442211055276382, + "TN": 11407, + "TP": 1176, + "n_pred": 1271, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9822289156626506, + "FN": 45, + "FP": 73, + "IoU": 0.9650784255696951, + "TN": 9421, + "TP": 3261, + "n_pred": 3334, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3945578231292517, + "FN": 267, + "FP": 0, + "IoU": 0.2457627118644068, + "TN": 6046, + "TP": 87, + "n_pred": 87, + "n_ref": 354 + }, + "2": { + "Dice": 0.8725361366622865, + "FN": 4, + "FP": 93, + "IoU": 0.7738927738927739, + "TN": 5971, + "TP": 332, + "n_pred": 425, + "n_ref": 336 + }, + "3": { + "Dice": 0.7692307692307693, + "FN": 1, + "FP": 2, + "IoU": 0.625, + "TN": 6392, + "TP": 5, + "n_pred": 7, + "n_ref": 6 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.820184790334044, + "FN": 155, + "FP": 98, + "IoU": 0.6951807228915663, + "TN": 11970, + "TP": 577, + "n_pred": 675, + "n_ref": 732 + }, + "3": { + "Dice": 0.8852223816355811, + "FN": 87, + "FP": 73, + "IoU": 0.7940797940797941, + "TN": 12023, + "TP": 617, + "n_pred": 690, + "n_ref": 704 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8611906124785347, + "FN": 814, + "FP": 156, + "IoU": 0.7562201558180447, + "TN": 15221, + "TP": 3009, + "n_pred": 3165, + "n_ref": 3823 + }, + "2": { + "Dice": 0.900353205608477, + "FN": 541, + "FP": 390, + "IoU": 0.818765816624489, + "TN": 14063, + "TP": 4206, + "n_pred": 4596, + "n_ref": 4747 + }, + "3": { + "Dice": 0.9566924303766409, + "FN": 327, + "FP": 26, + "IoU": 0.9169802445907808, + "TN": 14948, + "TP": 3899, + "n_pred": 3925, + "n_ref": 4226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9227784245246411, + "FN": 367, + "FP": 230, + "IoU": 0.8566282420749279, + "TN": 8636, + "TP": 3567, + "n_pred": 3797, + "n_ref": 3934 + }, + "2": { + "Dice": 0.8390022675736961, + "FN": 51, + "FP": 304, + "IoU": 0.72265625, + "TN": 11520, + "TP": 925, + "n_pred": 1229, + "n_ref": 976 + }, + "3": { + "Dice": 0.9351981351981352, + "FN": 130, + "FP": 9, + "IoU": 0.8782837127845884, + "TN": 11658, + "TP": 1003, + "n_pred": 1012, + "n_ref": 1133 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6331738437001595, + "FN": 43, + "FP": 417, + "IoU": 0.4632438739789965, + "TN": 11943, + "TP": 397, + "n_pred": 814, + "n_ref": 440 + }, + "2": { + "Dice": 0.9013732833957553, + "FN": 115, + "FP": 201, + "IoU": 0.8204545454545454, + "TN": 11040, + "TP": 1444, + "n_pred": 1645, + "n_ref": 1559 + }, + "3": { + "Dice": 0.9659833295787339, + "FN": 88, + "FP": 63, + "IoU": 0.9342047930283225, + "TN": 10505, + "TP": 2144, + "n_pred": 2207, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9078194532739987, + "FN": 68, + "FP": 77, + "IoU": 0.8311990686845169, + "TN": 5541, + "TP": 714, + "n_pred": 791, + "n_ref": 782 + }, + "3": { + "Dice": 0.9825907347300088, + "FN": 18, + "FP": 41, + "IoU": 0.9657772621809745, + "TN": 4676, + "TP": 1665, + "n_pred": 1706, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9826455842653298, + "FN": 64, + "FP": 26, + "IoU": 0.9658832448824868, + "TN": 3762, + "TP": 2548, + "n_pred": 2574, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9465997261524418, + "FN": 27, + "FP": 90, + "IoU": 0.8986135181975736, + "TN": 5246, + "TP": 1037, + "n_pred": 1127, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9891512444160817, + "FN": 16, + "FP": 18, + "IoU": 0.9785353535353535, + "TN": 4816, + "TP": 1550, + "n_pred": 1568, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.849931787175989, + "FN": 195, + "FP": 25, + "IoU": 0.7390272835112692, + "TN": 5557, + "TP": 623, + "n_pred": 648, + "n_ref": 818 + }, + "2": { + "Dice": 0.9001520527116067, + "FN": 119, + "FP": 78, + "IoU": 0.8184331797235023, + "TN": 5315, + "TP": 888, + "n_pred": 966, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9662618083670715, + "FN": 5, + "FP": 95, + "IoU": 0.9347258485639687, + "TN": 4868, + "TP": 1432, + "n_pred": 1527, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 931, + "IoU": 0.0, + "TN": 5469, + "TP": 0, + "n_pred": 931, + "n_ref": 0 + }, + "2": { + "Dice": 0.629757785467128, + "FN": 0, + "FP": 107, + "IoU": 0.4595959595959596, + "TN": 6202, + "TP": 91, + "n_pred": 198, + "n_ref": 91 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8218579234972677, + "FN": 1152, + "FP": 478, + "IoU": 0.6975881261595547, + "TN": 7410, + "TP": 3760, + "n_pred": 4238, + "n_ref": 4912 + }, + "2": { + "Dice": 0.7807294011706438, + "FN": 155, + "FP": 332, + "IoU": 0.6403249630723782, + "TN": 11446, + "TP": 867, + "n_pred": 1199, + "n_ref": 1022 + }, + "3": { + "Dice": 0.9146692233940557, + "FN": 73, + "FP": 194, + "IoU": 0.842756183745583, + "TN": 11102, + "TP": 1431, + "n_pred": 1625, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7821596244131456, + "FN": 802, + "FP": 126, + "IoU": 0.6422513492675405, + "TN": 10206, + "TP": 1666, + "n_pred": 1792, + "n_ref": 2468 + }, + "2": { + "Dice": 0.5016233766233766, + "FN": 463, + "FP": 151, + "IoU": 0.3347778981581798, + "TN": 11877, + "TP": 309, + "n_pred": 460, + "n_ref": 772 + }, + "3": { + "Dice": 0.7578347578347578, + "FN": 330, + "FP": 10, + "IoU": 0.6100917431192661, + "TN": 11928, + "TP": 532, + "n_pred": 542, + "n_ref": 862 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9704412989175687, + "FN": 16, + "FP": 268, + "IoU": 0.9425798625151638, + "TN": 1454, + "TP": 4662, + "n_pred": 4930, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9581749049429658, + "FN": 34, + "FP": 21, + "IoU": 0.9197080291970803, + "TN": 5715, + "TP": 630, + "n_pred": 651, + "n_ref": 664 + }, + "3": { + "Dice": 0.9825918762088974, + "FN": 8, + "FP": 10, + "IoU": 0.9657794676806084, + "TN": 5874, + "TP": 508, + "n_pred": 518, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9341317365269461, + "FN": 188, + "FP": 230, + "IoU": 0.8764044943820225, + "TN": 9418, + "TP": 2964, + "n_pred": 3194, + "n_ref": 3152 + }, + "2": { + "Dice": 0.8603286384976526, + "FN": 463, + "FP": 251, + "IoU": 0.7548918640576725, + "TN": 9887, + "TP": 2199, + "n_pred": 2450, + "n_ref": 2662 + }, + "3": { + "Dice": 0.9385159010600707, + "FN": 64, + "FP": 110, + "IoU": 0.8841544607190412, + "TN": 11298, + "TP": 1328, + "n_pred": 1438, + "n_ref": 1392 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.8440083056010493, + "FN": 199.77333333333334, + "FP": 141.24, + "IoU": 0.7620346016933905, + "TN": 9062.106666666667, + "TP": 1604.8799999999999, + "n_pred": 1746.1200000000001, + "n_ref": 1804.6533333333334 + }, + "mean": { + "1": { + "Dice": 0.7752526888059875, + "FN": 256.72, + "FP": 132.92, + "IoU": 0.6962618289148382, + "TN": 8546.52, + "TP": 2071.84, + "n_pred": 2204.76, + "n_ref": 2328.56 + }, + "2": { + "Dice": 0.8544352956151829, + "FN": 205.52, + "FP": 160.2, + "IoU": 0.7540790316123742, + "TN": 9519.08, + "TP": 1123.2, + "n_pred": 1283.4, + "n_ref": 1328.72 + }, + "3": { + "Dice": 0.9023369323819777, + "FN": 137.08, + "FP": 130.6, + "IoU": 0.8357629445529594, + "TN": 9120.72, + "TP": 1619.6, + "n_pred": 1750.2, + "n_ref": 1756.68 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8667763157894737, + "FN": 308, + "FP": 16, + "IoU": 0.7648766328011611, + "TN": 11422, + "TP": 1054, + "n_pred": 1070, + "n_ref": 1362 + }, + "2": { + "Dice": 0.8632119514472456, + "FN": 201, + "FP": 385, + "IoU": 0.7593429158110883, + "TN": 10365, + "TP": 1849, + "n_pred": 2234, + "n_ref": 2050 + }, + "3": { + "Dice": 0.9741850074466325, + "FN": 211, + "FP": 101, + "IoU": 0.949669301500242, + "TN": 6601, + "TP": 5887, + "n_pred": 5988, + "n_ref": 6098 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8923920493488691, + "FN": 314, + "FP": 0, + "IoU": 0.8056930693069307, + "TN": 4784, + "TP": 1302, + "n_pred": 1302, + "n_ref": 1616 + }, + "2": { + "Dice": 0.7505422993492408, + "FN": 207, + "FP": 138, + "IoU": 0.6006944444444444, + "TN": 5536, + "TP": 519, + "n_pred": 657, + "n_ref": 726 + }, + "3": { + "Dice": 0.7884670282614902, + "FN": 277, + "FP": 464, + "IoU": 0.6508011310084826, + "TN": 4278, + "TP": 1381, + "n_pred": 1845, + "n_ref": 1658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9364801864801865, + "FN": 132, + "FP": 86, + "IoU": 0.8805479452054794, + "TN": 4575, + "TP": 1607, + "n_pred": 1693, + "n_ref": 1739 + }, + "3": { + "Dice": 0.9518619436875567, + "FN": 69, + "FP": 37, + "IoU": 0.9081455805892548, + "TN": 5246, + "TP": 1048, + "n_pred": 1085, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8971710821733273, + "FN": 37, + "FP": 192, + "IoU": 0.8135179153094463, + "TN": 17972, + "TP": 999, + "n_pred": 1191, + "n_ref": 1036 + }, + "2": { + "Dice": 0.96, + "FN": 46, + "FP": 54, + "IoU": 0.9230769230769231, + "TN": 17900, + "TP": 1200, + "n_pred": 1254, + "n_ref": 1246 + }, + "3": { + "Dice": 0.930648769574944, + "FN": 44, + "FP": 18, + "IoU": 0.8702928870292888, + "TN": 18722, + "TP": 416, + "n_pred": 434, + "n_ref": 460 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9046114971572963, + "FN": 114, + "FP": 37, + "IoU": 0.825836216839677, + "TN": 31133, + "TP": 716, + "n_pred": 753, + "n_ref": 830 + }, + "2": { + "Dice": 0.9083609482538874, + "FN": 1027, + "FP": 411, + "IoU": 0.8321074138937536, + "TN": 23435, + "TP": 7127, + "n_pred": 7538, + "n_ref": 8154 + }, + "3": { + "Dice": 0.8700050581689428, + "FN": 302, + "FP": 212, + "IoU": 0.7699194270367055, + "TN": 29766, + "TP": 1720, + "n_pred": 1932, + "n_ref": 2022 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7206931702344547, + "FN": 531, + "FP": 17, + "IoU": 0.5633466135458167, + "TN": 5145, + "TP": 707, + "n_pred": 724, + "n_ref": 1238 + }, + "2": { + "Dice": 0.8400188768286928, + "FN": 320, + "FP": 19, + "IoU": 0.7241659886086249, + "TN": 5171, + "TP": 890, + "n_pred": 909, + "n_ref": 1210 + }, + "3": { + "Dice": 0.5572625698324022, + "FN": 1244, + "FP": 24, + "IoU": 0.3862536302032914, + "TN": 4334, + "TP": 798, + "n_pred": 822, + "n_ref": 2042 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9527403414195867, + "FN": 105, + "FP": 158, + "IoU": 0.9097460535346603, + "TN": 9886, + "TP": 2651, + "n_pred": 2809, + "n_ref": 2756 + }, + "2": { + "Dice": 0.8686462003019627, + "FN": 329, + "FP": 454, + "IoU": 0.7677935943060499, + "TN": 9428, + "TP": 2589, + "n_pred": 3043, + "n_ref": 2918 + }, + "3": { + "Dice": 0.959867676503874, + "FN": 217, + "FP": 244, + "IoU": 0.9228322731837965, + "TN": 6826, + "TP": 5513, + "n_pred": 5757, + "n_ref": 5730 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 50, + "FP": 0, + "IoU": 0.0, + "TN": 12750, + "TP": 0, + "n_pred": 0, + "n_ref": 50 + }, + "2": { + "Dice": 0.7006494784491242, + "FN": 792, + "FP": 729, + "IoU": 0.5392305362011511, + "TN": 9499, + "TP": 1780, + "n_pred": 2509, + "n_ref": 2572 + }, + "3": { + "Dice": 0.9474315628749046, + "FN": 203, + "FP": 761, + "IoU": 0.900113977826132, + "TN": 3149, + "TP": 8687, + "n_pred": 9448, + "n_ref": 8890 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9041591320072333, + "FN": 24, + "FP": 188, + "IoU": 0.8250825082508251, + "TN": 5188, + "TP": 1000, + "n_pred": 1188, + "n_ref": 1024 + }, + "2": { + "Dice": 0.840378548895899, + "FN": 42, + "FP": 211, + "IoU": 0.7247007616974973, + "TN": 5481, + "TP": 666, + "n_pred": 877, + "n_ref": 708 + }, + "3": { + "Dice": 0.9296527159394479, + "FN": 14, + "FP": 65, + "IoU": 0.8685524126455907, + "TN": 5799, + "TP": 522, + "n_pred": 587, + "n_ref": 536 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 36, + "IoU": 0.0, + "TN": 6364, + "TP": 0, + "n_pred": 36, + "n_ref": 0 + }, + "2": { + "Dice": 0.707474985285462, + "FN": 143, + "FP": 354, + "IoU": 0.5473588342440802, + "TN": 5302, + "TP": 601, + "n_pred": 955, + "n_ref": 744 + }, + "3": { + "Dice": 0.9483568075117371, + "FN": 97, + "FP": 46, + "IoU": 0.9017857142857143, + "TN": 4944, + "TP": 1313, + "n_pred": 1359, + "n_ref": 1410 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7285714285714285, + "FN": 13, + "FP": 25, + "IoU": 0.5730337078651685, + "TN": 6311, + "TP": 51, + "n_pred": 76, + "n_ref": 64 + }, + "2": { + "Dice": 0.8978068128791414, + "FN": 110, + "FP": 109, + "IoU": 0.8145639288738358, + "TN": 5219, + "TP": 962, + "n_pred": 1071, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9738372093023255, + "FN": 44, + "FP": 64, + "IoU": 0.9490084985835694, + "TN": 4282, + "TP": 2010, + "n_pred": 2074, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8237601569066966, + "FN": 1174, + "FP": 84, + "IoU": 0.7003334921391139, + "TN": 2202, + "TP": 2940, + "n_pred": 3024, + "n_ref": 4114 + }, + "2": { + "Dice": 0.9339019189765458, + "FN": 94, + "FP": 30, + "IoU": 0.876, + "TN": 5400, + "TP": 876, + "n_pred": 906, + "n_ref": 970 + }, + "3": { + "Dice": 0.9741267787839586, + "FN": 11, + "FP": 29, + "IoU": 0.9495586380832283, + "TN": 5607, + "TP": 753, + "n_pred": 782, + "n_ref": 764 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9691888069501969, + "FN": 289, + "FP": 16, + "IoU": 0.9402195217561741, + "TN": 1298, + "TP": 4797, + "n_pred": 4813, + "n_ref": 5086 + }, + "2": { + "Dice": 0.9544924154025671, + "FN": 9, + "FP": 30, + "IoU": 0.9129464285714286, + "TN": 5952, + "TP": 409, + "n_pred": 439, + "n_ref": 418 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9789230654651077, + "FN": 113, + "FP": 170, + "IoU": 0.9587162654996353, + "TN": 5945, + "TP": 6572, + "n_pred": 6742, + "n_ref": 6685 + }, + "2": { + "Dice": 0.9250866435617169, + "FN": 171, + "FP": 110, + "IoU": 0.8606150793650794, + "TN": 10784, + "TP": 1735, + "n_pred": 1845, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9790366458633382, + "FN": 79, + "FP": 52, + "IoU": 0.9589341692789969, + "TN": 9610, + "TP": 3059, + "n_pred": 3111, + "n_ref": 3138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9816984402079723, + "FN": 323, + "FP": 205, + "IoU": 0.9640547348355912, + "TN": 10911, + "TP": 14161, + "n_pred": 14366, + "n_ref": 14484 + }, + "2": { + "Dice": 0.9150278293135437, + "FN": 151, + "FP": 78, + "IoU": 0.8433652530779754, + "TN": 24138, + "TP": 1233, + "n_pred": 1311, + "n_ref": 1384 + }, + "3": { + "Dice": 0.9402654867256637, + "FN": 15, + "FP": 39, + "IoU": 0.8872651356993737, + "TN": 25121, + "TP": 425, + "n_pred": 464, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9348789221338836, + "FN": 798, + "FP": 275, + "IoU": 0.8777207977207977, + "TN": 16825, + "TP": 7702, + "n_pred": 7977, + "n_ref": 8500 + }, + "2": { + "Dice": 0.745531914893617, + "FN": 909, + "FP": 287, + "IoU": 0.5943012211668928, + "TN": 22652, + "TP": 1752, + "n_pred": 2039, + "n_ref": 2661 + }, + "3": { + "Dice": 0.9414572511582199, + "FN": 320, + "FP": 97, + "IoU": 0.8893899204244032, + "TN": 21830, + "TP": 3353, + "n_pred": 3450, + "n_ref": 3673 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7833295989244903, + "FN": 69, + "FP": 1865, + "IoU": 0.6438305709023942, + "TN": 13770, + "TP": 3496, + "n_pred": 5361, + "n_ref": 3565 + }, + "2": { + "Dice": 0.8133391078388913, + "FN": 289, + "FP": 142, + "IoU": 0.6854014598540146, + "TN": 17830, + "TP": 939, + "n_pred": 1081, + "n_ref": 1228 + }, + "3": { + "Dice": 0.8625410733844469, + "FN": 63, + "FP": 439, + "IoU": 0.7583052479537795, + "TN": 17123, + "TP": 1575, + "n_pred": 2014, + "n_ref": 1638 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.877462758289284, + "FN": 233, + "FP": 22, + "IoU": 0.7816780821917808, + "TN": 5232, + "TP": 913, + "n_pred": 935, + "n_ref": 1146 + }, + "2": { + "Dice": 0.8028169014084507, + "FN": 50, + "FP": 314, + "IoU": 0.6705882352941176, + "TN": 5295, + "TP": 741, + "n_pred": 1055, + "n_ref": 791 + }, + "3": { + "Dice": 0.7606310013717421, + "FN": 200, + "FP": 498, + "IoU": 0.6137244050913115, + "TN": 4593, + "TP": 1109, + "n_pred": 1607, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.738191632928475, + "FN": 1923, + "FP": 17, + "IoU": 0.5850267379679145, + "TN": 1725, + "TP": 2735, + "n_pred": 2752, + "n_ref": 4658 + }, + "2": { + "Dice": 0.8705035971223022, + "FN": 116, + "FP": 64, + "IoU": 0.7707006369426752, + "TN": 5615, + "TP": 605, + "n_pred": 669, + "n_ref": 721 + }, + "3": { + "Dice": 0.9524301964839711, + "FN": 17, + "FP": 75, + "IoU": 0.9091806515301086, + "TN": 5387, + "TP": 921, + "n_pred": 996, + "n_ref": 938 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8046204012389252, + "FN": 107.09333333333335, + "FP": 214.86666666666667, + "IoU": 0.715279712297708, + "TN": 9601.16, + "TP": 1340.8799999999999, + "n_pred": 1555.7466666666667, + "n_ref": 1447.9733333333334 + }, + "mean": { + "1": { + "Dice": 0.7258749328052105, + "FN": 128.12, + "FP": 240.8, + "IoU": 0.6472313781731555, + "TN": 9280.8, + "TP": 1614.28, + "n_pred": 1855.08, + "n_ref": 1742.4 + }, + "2": { + "Dice": 0.8394486425853915, + "FN": 117.12, + "FP": 251.2, + "IoU": 0.7310212884546315, + "TN": 9896.68, + "TP": 999.0, + "n_pred": 1250.2, + "n_ref": 1116.12 + }, + "3": { + "Dice": 0.8485376283261737, + "FN": 76.04, + "FP": 152.6, + "IoU": 0.7675864702653371, + "TN": 9626.0, + "TP": 1409.36, + "n_pred": 1561.96, + "n_ref": 1485.4 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7878787878787878, + "FN": 3, + "FP": 4, + "IoU": 0.65, + "TN": 6380, + "TP": 13, + "n_pred": 17, + "n_ref": 16 + }, + "2": { + "Dice": 0.7993630573248408, + "FN": 119, + "FP": 259, + "IoU": 0.6657824933687002, + "TN": 5269, + "TP": 753, + "n_pred": 1012, + "n_ref": 872 + }, + "3": { + "Dice": 0.9505655634687893, + "FN": 236, + "FP": 0, + "IoU": 0.9057884231536926, + "TN": 3895, + "TP": 2269, + "n_pred": 2269, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.921627731725697, + "FN": 55, + "FP": 153, + "IoU": 0.8546470999301188, + "TN": 4969, + "TP": 1223, + "n_pred": 1376, + "n_ref": 1278 + }, + "3": { + "Dice": 0.9841065292096219, + "FN": 51, + "FP": 23, + "IoU": 0.9687103594080338, + "TN": 4035, + "TP": 2291, + "n_pred": 2314, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7996671786994367, + "FN": 155, + "FP": 2975, + "IoU": 0.6662045430308201, + "TN": 22623, + "TP": 6247, + "n_pred": 9222, + "n_ref": 6402 + }, + "2": { + "Dice": 0.8584778320008306, + "FN": 426, + "FP": 937, + "IoU": 0.752046570856831, + "TN": 26503, + "TP": 4134, + "n_pred": 5071, + "n_ref": 4560 + }, + "3": { + "Dice": 0.9656468622741986, + "FN": 424, + "FP": 234, + "IoU": 0.9335756107409651, + "TN": 22094, + "TP": 9248, + "n_pred": 9482, + "n_ref": 9672 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9504057709648331, + "FN": 216, + "FP": 114, + "IoU": 0.9054982817869416, + "TN": 2908, + "TP": 3162, + "n_pred": 3276, + "n_ref": 3378 + }, + "2": { + "Dice": 0.9492635024549918, + "FN": 38, + "FP": 24, + "IoU": 0.9034267912772586, + "TN": 5758, + "TP": 580, + "n_pred": 604, + "n_ref": 618 + }, + "3": { + "Dice": 0.9758842443729904, + "FN": 17, + "FP": 13, + "IoU": 0.9529042386185244, + "TN": 5763, + "TP": 607, + "n_pred": 620, + "n_ref": 624 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.650049850448654, + "FN": 328, + "FP": 23, + "IoU": 0.4815361890694239, + "TN": 12123, + "TP": 326, + "n_pred": 349, + "n_ref": 654 + }, + "2": { + "Dice": 0.7236403995560489, + "FN": 0, + "FP": 249, + "IoU": 0.5669565217391305, + "TN": 12225, + "TP": 326, + "n_pred": 575, + "n_ref": 326 + }, + "3": { + "Dice": 0.5, + "FN": 32, + "FP": 0, + "IoU": 0.3333333333333333, + "TN": 12752, + "TP": 16, + "n_pred": 16, + "n_ref": 48 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9428044280442804, + "FN": 14, + "FP": 358, + "IoU": 0.8917975567190227, + "TN": 9362, + "TP": 3066, + "n_pred": 3424, + "n_ref": 3080 + }, + "2": { + "Dice": 0.8681065212832879, + "FN": 596, + "FP": 33, + "IoU": 0.766950722489811, + "TN": 10101, + "TP": 2070, + "n_pred": 2103, + "n_ref": 2666 + }, + "3": { + "Dice": 0.9595311191738767, + "FN": 31, + "FP": 114, + "IoU": 0.9222103004291845, + "TN": 10936, + "TP": 1719, + "n_pred": 1833, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9063867016622922, + "FN": 1558, + "FP": 154, + "IoU": 0.8288, + "TN": 22000, + "TP": 8288, + "n_pred": 8442, + "n_ref": 9846 + }, + "2": { + "Dice": 0.8186033824331697, + "FN": 377, + "FP": 953, + "IoU": 0.6929115677672593, + "TN": 27669, + "TP": 3001, + "n_pred": 3954, + "n_ref": 3378 + }, + "3": { + "Dice": 0.9692210259658012, + "FN": 712, + "FP": 17, + "IoU": 0.9402801671172278, + "TN": 19793, + "TP": 11478, + "n_pred": 11495, + "n_ref": 12190 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8507936507936508, + "FN": 6, + "FP": 41, + "IoU": 0.7403314917127072, + "TN": 6219, + "TP": 134, + "n_pred": 175, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 320, + "IoU": 0.0, + "TN": 6080, + "TP": 0, + "n_pred": 320, + "n_ref": 0 + }, + "2": { + "Dice": 0.7368088467614534, + "FN": 46, + "FP": 787, + "IoU": 0.5832916458229115, + "TN": 4401, + "TP": 1166, + "n_pred": 1953, + "n_ref": 1212 + }, + "3": { + "Dice": 0.6899252402990388, + "FN": 7, + "FP": 864, + "IoU": 0.5266304347826087, + "TN": 4560, + "TP": 969, + "n_pred": 1833, + "n_ref": 976 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8356096758268883, + "FN": 273, + "FP": 726, + "IoU": 0.7176370830977954, + "TN": 22062, + "TP": 2539, + "n_pred": 3265, + "n_ref": 2812 + }, + "2": { + "Dice": 0.8621236133122029, + "FN": 426, + "FP": 1314, + "IoU": 0.7576601671309192, + "TN": 18420, + "TP": 5440, + "n_pred": 6754, + "n_ref": 5866 + }, + "3": { + "Dice": 0.6528231451236585, + "FN": 244, + "FP": 1244, + "IoU": 0.484586075510911, + "TN": 22713, + "TP": 1399, + "n_pred": 2643, + "n_ref": 1643 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4355644355644356, + "FN": 284, + "FP": 281, + "IoU": 0.2784163473818646, + "TN": 18417, + "TP": 218, + "n_pred": 499, + "n_ref": 502 + }, + "2": { + "Dice": 0.729930099555179, + "FN": 499, + "FP": 776, + "IoU": 0.5747164776517678, + "TN": 16202, + "TP": 1723, + "n_pred": 2499, + "n_ref": 2222 + }, + "3": { + "Dice": 0.7003293084522503, + "FN": 0, + "FP": 546, + "IoU": 0.5388513513513513, + "TN": 18016, + "TP": 638, + "n_pred": 1184, + "n_ref": 638 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4, + "FN": 5, + "FP": 436, + "IoU": 0.25, + "TN": 5812, + "TP": 147, + "n_pred": 583, + "n_ref": 152 + }, + "2": { + "Dice": 0.8786536758193091, + "FN": 38, + "FP": 99, + "IoU": 0.7835703001579779, + "TN": 5767, + "TP": 496, + "n_pred": 595, + "n_ref": 534 + }, + "3": { + "Dice": 0.9518072289156626, + "FN": 2, + "FP": 30, + "IoU": 0.9080459770114943, + "TN": 6052, + "TP": 316, + "n_pred": 346, + "n_ref": 318 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9671361502347418, + "FN": 19, + "FP": 2, + "IoU": 0.9363636363636364, + "TN": 6070, + "TP": 309, + "n_pred": 311, + "n_ref": 328 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8571428571428571, + "FN": 11, + "FP": 41, + "IoU": 0.75, + "TN": 6192, + "TP": 156, + "n_pred": 197, + "n_ref": 167 + }, + "2": { + "Dice": 0.7, + "FN": 12, + "FP": 0, + "IoU": 0.5384615384615384, + "TN": 6374, + "TP": 14, + "n_pred": 14, + "n_ref": 26 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8718647764449291, + "FN": 33, + "FP": 437, + "IoU": 0.7728371193813437, + "TN": 10731, + "TP": 1599, + "n_pred": 2036, + "n_ref": 1632 + }, + "2": { + "Dice": 0.7530864197530864, + "FN": 11, + "FP": 349, + "IoU": 0.6039603960396039, + "TN": 11891, + "TP": 549, + "n_pred": 898, + "n_ref": 560 + }, + "3": { + "Dice": 0.5761092150170648, + "FN": 4, + "FP": 617, + "IoU": 0.4046021093000959, + "TN": 11757, + "TP": 422, + "n_pred": 1039, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9895116834967559, + "FN": 164, + "FP": 51, + "IoU": 0.9792410929805928, + "TN": 8843, + "TP": 10142, + "n_pred": 10193, + "n_ref": 10306 + }, + "2": { + "Dice": 0.9170068027210885, + "FN": 72, + "FP": 50, + "IoU": 0.8467336683417085, + "TN": 18404, + "TP": 674, + "n_pred": 724, + "n_ref": 746 + }, + "3": { + "Dice": 0.9176882661996497, + "FN": 24, + "FP": 23, + "IoU": 0.8478964401294499, + "TN": 18891, + "TP": 262, + "n_pred": 285, + "n_ref": 286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9763659466327828, + "FN": 44, + "FP": 49, + "IoU": 0.9538232373386296, + "TN": 4386, + "TP": 1921, + "n_pred": 1970, + "n_ref": 1965 + }, + "2": { + "Dice": 0.9056061332055583, + "FN": 72, + "FP": 125, + "IoU": 0.8274956217162872, + "TN": 5258, + "TP": 945, + "n_pred": 1070, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9797484544873162, + "FN": 73, + "FP": 22, + "IoU": 0.9603008775595487, + "TN": 4007, + "TP": 2298, + "n_pred": 2320, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 12795, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + }, + "2": { + "Dice": 0.9353686261773303, + "FN": 114, + "FP": 85, + "IoU": 0.8785845027455765, + "TN": 11161, + "TP": 1440, + "n_pred": 1525, + "n_ref": 1554 + }, + "3": { + "Dice": 0.9645061728395061, + "FN": 25, + "FP": 67, + "IoU": 0.9314456035767511, + "TN": 11458, + "TP": 1250, + "n_pred": 1317, + "n_ref": 1275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.969485614646905, + "FN": 96, + "FP": 44, + "IoU": 0.9407783417935702, + "TN": 4036, + "TP": 2224, + "n_pred": 2268, + "n_ref": 2320 + }, + "2": { + "Dice": 0.9016152716593245, + "FN": 21, + "FP": 46, + "IoU": 0.820855614973262, + "TN": 6026, + "TP": 307, + "n_pred": 353, + "n_ref": 328 + }, + "3": { + "Dice": 0.8387096774193549, + "FN": 19, + "FP": 1, + "IoU": 0.7222222222222222, + "TN": 6328, + "TP": 52, + "n_pred": 53, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907114/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8357119435262851, + "FN": 158.05046153846155, + "FP": 157.43138461538462, + "IoU": 0.7543089859884359, + "TN": 9712.474666666667, + "TP": 1308.9050256410258, + "n_pred": 1466.3364102564103, + "n_ref": 1466.9554871794874 + }, + "mean": { + "1": { + "Dice": 0.7602156785362962, + "FN": 222.49353846153844, + "FP": 186.8483076923077, + "IoU": 0.6803349382288881, + "TN": 9260.931076923076, + "TP": 1666.5886153846157, + "n_pred": 1853.4369230769232, + "n_ref": 1889.0821538461537 + }, + "2": { + "Dice": 0.8457104835859877, + "FN": 164.91384615384615, + "FP": 160.37353846153846, + "IoU": 0.747055652479905, + "TN": 10038.277846153846, + "TP": 973.2963076923077, + "n_pred": 1133.6698461538463, + "n_ref": 1138.2101538461538 + }, + "3": { + "Dice": 0.9012096684565712, + "FN": 86.744, + "FP": 125.07230769230769, + "IoU": 0.8355363672565147, + "TN": 9838.215076923076, + "TP": 1286.8301538461537, + "n_pred": 1411.9024615384615, + "n_ref": 1373.5741538461539 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_004/summary.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_004/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..879df3581609a61d948071c756a653e42c76b1fb --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_004/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8981279503044587, + "FN": 896.3066666666668, + "FP": 870.8666666666667, + "IoU": 0.8210633316875932, + "TN": 843363.66, + "TP": 9297.806666666665, + "n_pred": 10168.673333333332, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8842652332223261, + "FN": 1033.88, + "FP": 897.12, + "IoU": 0.7982876950227028, + "TN": 843677.46, + "TP": 8820.18, + "n_pred": 9717.3, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8704921446024733, + "FN": 1218.68, + "FP": 1170.48, + "IoU": 0.7744121802222604, + "TN": 843202.66, + "TP": 8836.82, + "n_pred": 10007.3, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9396264730885765, + "FN": 436.36, + "FP": 545.0, + "IoU": 0.8904901198178165, + "TN": 843210.86, + "TP": 10236.42, + "n_pred": 10781.42, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9322107834583843, + "FN": 761, + "FP": 793, + "IoU": 0.873028842225672, + "TN": 1093681, + "TP": 10685, + "n_pred": 11478, + "n_ref": 11446 + }, + "2": { + "Dice": 0.859070673344463, + "FN": 1106, + "FP": 2946, + "IoU": 0.7529569564687233, + "TN": 1089518, + "TP": 12350, + "n_pred": 15296, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9453933799235067, + "FN": 602, + "FP": 2125, + "IoU": 0.8964417271104698, + "TN": 1079587, + "TP": 23606, + "n_pred": 25731, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8786412199799105, + "FN": 67, + "FP": 1262, + "IoU": 0.7835504885993485, + "TN": 1099780, + "TP": 4811, + "n_pred": 6073, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8808614102118791, + "FN": 2032, + "FP": 1741, + "IoU": 0.787088764742396, + "TN": 1088199, + "TP": 13948, + "n_pred": 15689, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9368755081167554, + "FN": 620, + "FP": 1787, + "IoU": 0.8812472248260891, + "TN": 1085651, + "TP": 17862, + "n_pred": 19649, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8946928042075065, + "FN": 1385, + "FP": 377, + "IoU": 0.809451714069428, + "TN": 900193, + "TP": 7485, + "n_pred": 7862, + "n_ref": 8870 + }, + "2": { + "Dice": 0.901907664521955, + "FN": 1801, + "FP": 806, + "IoU": 0.8213404605263158, + "TN": 894848, + "TP": 11985, + "n_pred": 12791, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9754864444908277, + "FN": 381, + "FP": 676, + "IoU": 0.952145961608113, + "TN": 887352, + "TP": 21031, + "n_pred": 21707, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7656223823085944, + "FN": 2408, + "FP": 390, + "IoU": 0.6202497285559175, + "TN": 902072, + "TP": 4570, + "n_pred": 4960, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8898014569347236, + "FN": 1865, + "FP": 1221, + "IoU": 0.8014795754261821, + "TN": 893895, + "TP": 12459, + "n_pred": 13680, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9715129547590281, + "FN": 542, + "FP": 519, + "IoU": 0.9446039784890096, + "TN": 890287, + "TP": 18092, + "n_pred": 18611, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9479050638334333, + "FN": 2052, + "FP": 380, + "IoU": 0.9009691342943237, + "TN": 1401202, + "TP": 22126, + "n_pred": 22506, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8983118172790466, + "FN": 1515, + "FP": 1557, + "IoU": 0.8153957093924644, + "TN": 1409119, + "TP": 13569, + "n_pred": 15126, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9765078864974499, + "FN": 481, + "FP": 712, + "IoU": 0.9540941973218409, + "TN": 1399772, + "TP": 24795, + "n_pred": 25507, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9532170303472262, + "FN": 557, + "FP": 1111, + "IoU": 0.9106157226300842, + "TN": 1407099, + "TP": 16993, + "n_pred": 18104, + "n_ref": 17550 + }, + "2": { + "Dice": 0.9011355826815459, + "FN": 1300, + "FP": 1721, + "IoU": 0.8200607540651618, + "TN": 1408971, + "TP": 13768, + "n_pred": 15489, + "n_ref": 15068 + }, + "3": { + "Dice": 0.972663334365462, + "FN": 711, + "FP": 525, + "IoU": 0.9467814854682455, + "TN": 1402535, + "TP": 21989, + "n_pred": 22514, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9102780592142294, + "FN": 1172, + "FP": 422, + "IoU": 0.8353305785123967, + "TN": 752368, + "TP": 8086, + "n_pred": 8508, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8712494046674075, + "FN": 1178, + "FP": 1255, + "IoU": 0.7718706047819972, + "TN": 751383, + "TP": 8232, + "n_pred": 9487, + "n_ref": 9410 + }, + "3": { + "Dice": 0.971432147438906, + "FN": 493, + "FP": 420, + "IoU": 0.9444512046726697, + "TN": 745612, + "TP": 15523, + "n_pred": 15943, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8189438390611903, + "FN": 1010, + "FP": 718, + "IoU": 0.6933995741660752, + "TN": 756412, + "TP": 3908, + "n_pred": 4626, + "n_ref": 4918 + }, + "2": { + "Dice": 0.820027578336741, + "FN": 2615, + "FP": 1170, + "IoU": 0.6949548678272083, + "TN": 749640, + "TP": 8623, + "n_pred": 9793, + "n_ref": 11238 + }, + "3": { + "Dice": 0.948946836110989, + "FN": 1122, + "FP": 39, + "IoU": 0.9028533177139988, + "TN": 750097, + "TP": 10790, + "n_pred": 10829, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9619590887621262, + "FN": 606, + "FP": 441, + "IoU": 0.9267063353167658, + "TN": 1063987, + "TP": 13238, + "n_pred": 13679, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8932098137025348, + "FN": 1096, + "FP": 1002, + "IoU": 0.8070272259013981, + "TN": 1067400, + "TP": 8774, + "n_pred": 9776, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9763224731682005, + "FN": 529, + "FP": 338, + "IoU": 0.9537402625120052, + "TN": 1059530, + "TP": 17875, + "n_pred": 18213, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9581502717998361, + "FN": 429, + "FP": 695, + "IoU": 0.9196626402687442, + "TN": 1064281, + "TP": 12867, + "n_pred": 13562, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8863187316273915, + "FN": 1604, + "FP": 755, + "IoU": 0.7958459541324102, + "TN": 1066717, + "TP": 9196, + "n_pred": 9951, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9648662821185108, + "FN": 506, + "FP": 566, + "IoU": 0.9321175278622087, + "TN": 1062480, + "TP": 14720, + "n_pred": 15286, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9274767845952259, + "FN": 992, + "FP": 281, + "IoU": 0.864761500053118, + "TN": 1096507, + "TP": 8140, + "n_pred": 8421, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8756630870746539, + "FN": 1330, + "FP": 1553, + "IoU": 0.7788262370540852, + "TN": 1092885, + "TP": 10152, + "n_pred": 11705, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9403695775632345, + "FN": 733, + "FP": 632, + "IoU": 0.8874505277044855, + "TN": 1093792, + "TP": 10763, + "n_pred": 11395, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8796119868352676, + "FN": 513, + "FP": 182, + "IoU": 0.7850958565244279, + "TN": 1102686, + "TP": 2539, + "n_pred": 2721, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8756920743268866, + "FN": 806, + "FP": 2472, + "IoU": 0.7788720992984349, + "TN": 1091096, + "TP": 11546, + "n_pred": 14018, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7942849583278211, + "FN": 278, + "FP": 1277, + "IoU": 0.6587667324994514, + "TN": 1101363, + "TP": 3002, + "n_pred": 4279, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8421181512090603, + "FN": 2286, + "FP": 293, + "IoU": 0.7272919530506503, + "TN": 1137423, + "TP": 6878, + "n_pred": 7171, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9183388011495129, + "FN": 1361, + "FP": 1850, + "IoU": 0.8490078058873319, + "TN": 1125614, + "TP": 18055, + "n_pred": 19905, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9370942270573784, + "FN": 1249, + "FP": 185, + "IoU": 0.881634337598019, + "TN": 1134765, + "TP": 10681, + "n_pred": 10866, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7067318891218263, + "FN": 949, + "FP": 310, + "IoU": 0.5464697406340058, + "TN": 1144104, + "TP": 1517, + "n_pred": 1827, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8554112195929174, + "FN": 3759, + "FP": 3231, + "IoU": 0.747352441536849, + "TN": 1119213, + "TP": 20677, + "n_pred": 23908, + "n_ref": 24436 + }, + "3": { + "Dice": 0.6270983213429256, + "FN": 101, + "FP": 3009, + "IoU": 0.45676855895196505, + "TN": 1141155, + "TP": 2615, + "n_pred": 5624, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9551936545439204, + "FN": 526, + "FP": 536, + "IoU": 0.9142303343563237, + "TN": 788418, + "TP": 11320, + "n_pred": 11856, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8814797634234025, + "FN": 1033, + "FP": 1011, + "IoU": 0.7880767236910317, + "TN": 791155, + "TP": 7601, + "n_pred": 8612, + "n_ref": 8634 + }, + "3": { + "Dice": 0.958653278204371, + "FN": 538, + "FP": 162, + "IoU": 0.9205899035734544, + "TN": 791985, + "TP": 8115, + "n_pred": 8277, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8458257160268129, + "FN": 469, + "FP": 796, + "IoU": 0.7328405491024287, + "TN": 796065, + "TP": 3470, + "n_pred": 4266, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9122038299253489, + "FN": 1410, + "FP": 754, + "IoU": 0.8385797404147397, + "TN": 787394, + "TP": 11242, + "n_pred": 11996, + "n_ref": 12652 + }, + "3": { + "Dice": 0.9029076687638157, + "FN": 191, + "FP": 380, + "IoU": 0.8230006199628023, + "TN": 797574, + "TP": 2655, + "n_pred": 3035, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9510374015070708, + "FN": 372, + "FP": 1051, + "IoU": 0.9066456734238667, + "TN": 1332597, + "TP": 13820, + "n_pred": 14871, + "n_ref": 14192 + }, + "2": { + "Dice": 0.889273680269562, + "FN": 1105, + "FP": 1261, + "IoU": 0.8006235779893823, + "TN": 1335973, + "TP": 9501, + "n_pred": 10762, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9745696513814552, + "FN": 485, + "FP": 394, + "IoU": 0.9504006319828462, + "TN": 1330118, + "TP": 16843, + "n_pred": 17237, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7784827586206896, + "FN": 224, + "FP": 2988, + "IoU": 0.6373080397470642, + "TN": 1338984, + "TP": 5644, + "n_pred": 8632, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8807429933426482, + "FN": 1398, + "FP": 1504, + "IoU": 0.7868996915846673, + "TN": 1334222, + "TP": 10716, + "n_pred": 12220, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9583062735420185, + "FN": 551, + "FP": 412, + "IoU": 0.9199501246882793, + "TN": 1335810, + "TP": 11067, + "n_pred": 11479, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.830997465334725, + "FN": 1315, + "FP": 3219, + "IoU": 0.7108602767680633, + "TN": 836287, + "TP": 11147, + "n_pred": 14366, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8615400613528831, + "FN": 1163, + "FP": 1500, + "IoU": 0.7567592254293022, + "TN": 841020, + "TP": 8285, + "n_pred": 9785, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9721054642720672, + "FN": 680, + "FP": 342, + "IoU": 0.945724907063197, + "TN": 833138, + "TP": 17808, + "n_pred": 18150, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8953047101718878, + "FN": 922, + "FP": 485, + "IoU": 0.8104539943419102, + "TN": 844545, + "TP": 6016, + "n_pred": 6501, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8767455435319473, + "FN": 1529, + "FP": 1216, + "IoU": 0.78054045410937, + "TN": 839460, + "TP": 9763, + "n_pred": 10979, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9592427442697332, + "FN": 734, + "FP": 308, + "IoU": 0.921677690920024, + "TN": 838664, + "TP": 12262, + "n_pred": 12570, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8936133135836891, + "FN": 728, + "FP": 493, + "IoU": 0.8076862498031186, + "TN": 845619, + "TP": 5128, + "n_pred": 5621, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8827043297059505, + "FN": 1189, + "FP": 1344, + "IoU": 0.7900364721485411, + "TN": 839904, + "TP": 9531, + "n_pred": 10875, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9518418115133153, + "FN": 1018, + "FP": 190, + "IoU": 0.9081089304731478, + "TN": 838822, + "TP": 11938, + "n_pred": 12128, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8854190585533869, + "FN": 176, + "FP": 323, + "IoU": 0.7943963741244334, + "TN": 849541, + "TP": 1928, + "n_pred": 2251, + "n_ref": 2104 + }, + "2": { + "Dice": 0.9045290581162324, + "FN": 1302, + "FP": 1080, + "IoU": 0.8256988145763208, + "TN": 838302, + "TP": 11284, + "n_pred": 12364, + "n_ref": 12586 + }, + "3": { + "Dice": 0.948230443248196, + "FN": 467, + "FP": 437, + "IoU": 0.9015572253076337, + "TN": 842785, + "TP": 8279, + "n_pred": 8716, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8929493049196704, + "FN": 2361, + "FP": 211, + "IoU": 0.8066020001503873, + "TN": 783741, + "TP": 10727, + "n_pred": 10938, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8449489712383343, + "FN": 1113, + "FP": 1728, + "IoU": 0.7315252315252315, + "TN": 786458, + "TP": 7741, + "n_pred": 9469, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9552385265700483, + "FN": 803, + "FP": 383, + "IoU": 0.9143125496712665, + "TN": 783199, + "TP": 12655, + "n_pred": 13038, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8485884101040119, + "FN": 1957, + "FP": 81, + "IoU": 0.7369983223641761, + "TN": 789291, + "TP": 5711, + "n_pred": 5792, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8809848140860703, + "FN": 891, + "FP": 1468, + "IoU": 0.7872858431018936, + "TN": 785950, + "TP": 8731, + "n_pred": 10199, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9470614625392553, + "FN": 588, + "FP": 356, + "IoU": 0.8994461014060503, + "TN": 787652, + "TP": 8444, + "n_pred": 8800, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9119103677843631, + "FN": 1236, + "FP": 934, + "IoU": 0.8380838680793912, + "TN": 883268, + "TP": 11232, + "n_pred": 12166, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8745928338762216, + "FN": 1209, + "FP": 1409, + "IoU": 0.7771345875542692, + "TN": 884923, + "TP": 9129, + "n_pred": 10538, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9516083235306048, + "FN": 522, + "FP": 671, + "IoU": 0.9076839743093709, + "TN": 883747, + "TP": 11730, + "n_pred": 12401, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8027693068490893, + "FN": 1486, + "FP": 907, + "IoU": 0.6705218229381799, + "TN": 889407, + "TP": 4870, + "n_pred": 5777, + "n_ref": 6356 + }, + "2": { + "Dice": 0.9008029008029008, + "FN": 1084, + "FP": 1214, + "IoU": 0.8195098963242224, + "TN": 883938, + "TP": 10434, + "n_pred": 11648, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9412445730824891, + "FN": 696, + "FP": 319, + "IoU": 0.8890103881902679, + "TN": 887525, + "TP": 8130, + "n_pred": 8449, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9414852694935965, + "FN": 818, + "FP": 475, + "IoU": 0.8894399315946986, + "TN": 750353, + "TP": 10402, + "n_pred": 10877, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9266310997993246, + "FN": 946, + "FP": 553, + "IoU": 0.8632922936616507, + "TN": 751083, + "TP": 9466, + "n_pred": 10019, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9768150279235065, + "FN": 208, + "FP": 340, + "IoU": 0.9546807806814422, + "TN": 749956, + "TP": 11544, + "n_pred": 11884, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8995555555555556, + "FN": 250, + "FP": 541, + "IoU": 0.8174474959612278, + "TN": 757715, + "TP": 3542, + "n_pred": 4083, + "n_ref": 3792 + }, + "2": { + "Dice": 0.9006980802792321, + "FN": 1310, + "FP": 966, + "IoU": 0.8193364026035879, + "TN": 749450, + "TP": 10322, + "n_pred": 11288, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9443203811225249, + "FN": 491, + "FP": 257, + "IoU": 0.8945141728952193, + "TN": 754957, + "TP": 6343, + "n_pred": 6600, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8695603659897344, + "FN": 149, + "FP": 2189, + "IoU": 0.7692231763893002, + "TN": 985197, + "TP": 7793, + "n_pred": 9982, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8453675511091779, + "FN": 974, + "FP": 1870, + "IoU": 0.7321529478244491, + "TN": 984710, + "TP": 7774, + "n_pred": 9644, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9708365310821182, + "FN": 101, + "FP": 887, + "IoU": 0.9433258762117822, + "TN": 977895, + "TP": 16445, + "n_pred": 17332, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7583521728208993, + "FN": 223, + "FP": 1701, + "IoU": 0.6107626947198058, + "TN": 990385, + "TP": 3019, + "n_pred": 4720, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8332602018429136, + "FN": 738, + "FP": 2302, + "IoU": 0.7141782625047011, + "TN": 984692, + "TP": 7596, + "n_pred": 9898, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9234758911696189, + "FN": 109, + "FP": 1632, + "IoU": 0.8578311285317655, + "TN": 983082, + "TP": 10505, + "n_pred": 12137, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9493058254142085, + "FN": 888, + "FP": 547, + "IoU": 0.903503463116132, + "TN": 743145, + "TP": 13436, + "n_pred": 13983, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9026141913243321, + "FN": 957, + "FP": 738, + "IoU": 0.8225130890052356, + "TN": 748466, + "TP": 7855, + "n_pred": 8593, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9759041413390476, + "FN": 144, + "FP": 407, + "IoU": 0.9529421812281151, + "TN": 746307, + "TP": 11158, + "n_pred": 11565, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7794218857536133, + "FN": 706, + "FP": 1858, + "IoU": 0.6385678037778404, + "TN": 750922, + "TP": 4530, + "n_pred": 6388, + "n_ref": 5236 + }, + "2": { + "Dice": 0.9232400339270568, + "FN": 624, + "FP": 824, + "IoU": 0.8574241827491138, + "TN": 747860, + "TP": 8708, + "n_pred": 9532, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9315700072797864, + "FN": 353, + "FP": 211, + "IoU": 0.8719055189643425, + "TN": 753613, + "TP": 3839, + "n_pred": 4050, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9639811632938781, + "FN": 372, + "FP": 194, + "IoU": 0.9304668304668304, + "TN": 630836, + "TP": 7574, + "n_pred": 7768, + "n_ref": 7946 + }, + "2": { + "Dice": 0.9016799779675021, + "FN": 455, + "FP": 616, + "IoU": 0.820962888665998, + "TN": 632994, + "TP": 4911, + "n_pred": 5527, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9647564867489941, + "FN": 381, + "FP": 127, + "IoU": 0.9319126122503686, + "TN": 631515, + "TP": 6953, + "n_pred": 7080, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9007278922100046, + "FN": 112, + "FP": 529, + "IoU": 0.8193857424626655, + "TN": 635427, + "TP": 2908, + "n_pred": 3437, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9376524803469775, + "FN": 434, + "FP": 486, + "IoU": 0.8826231181423833, + "TN": 631138, + "TP": 6918, + "n_pred": 7404, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9245901639344263, + "FN": 218, + "FP": 196, + "IoU": 0.8597560975609756, + "TN": 636024, + "TP": 2538, + "n_pred": 2734, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.937138631168482, + "FN": 1501, + "FP": 369, + "IoU": 0.8817129483205769, + "TN": 967231, + "TP": 13939, + "n_pred": 14308, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8759447747656959, + "FN": 1204, + "FP": 1258, + "IoU": 0.7792720100412408, + "TN": 971886, + "TP": 8692, + "n_pred": 9950, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9683431952662722, + "FN": 126, + "FP": 730, + "IoU": 0.9386291941496989, + "TN": 969092, + "TP": 13092, + "n_pred": 13822, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9369179690663212, + "FN": 403, + "FP": 376, + "IoU": 0.8813223644119439, + "TN": 976476, + "TP": 5785, + "n_pred": 6161, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9265559743302435, + "FN": 860, + "FP": 582, + "IoU": 0.863161890301765, + "TN": 972502, + "TP": 9096, + "n_pred": 9678, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9510683412167672, + "FN": 159, + "FP": 441, + "IoU": 0.9067019126107915, + "TN": 976609, + "TP": 5831, + "n_pred": 6272, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9540529756606612, + "FN": 638, + "FP": 859, + "IoU": 0.9121427313809496, + "TN": 1031537, + "TP": 15542, + "n_pred": 16401, + "n_ref": 16180 + }, + "2": { + "Dice": 0.9041546222297795, + "FN": 732, + "FP": 959, + "IoU": 0.8250749974138822, + "TN": 1038909, + "TP": 7976, + "n_pred": 8935, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9695353535353536, + "FN": 262, + "FP": 492, + "IoU": 0.9408720200752823, + "TN": 1035824, + "TP": 11998, + "n_pred": 12490, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9221288515406163, + "FN": 492, + "FP": 342, + "IoU": 0.8555093555093555, + "TN": 1042804, + "TP": 4938, + "n_pred": 5280, + "n_ref": 5430 + }, + "2": { + "Dice": 0.904228855721393, + "FN": 871, + "FP": 1131, + "IoU": 0.8251986379114642, + "TN": 1037123, + "TP": 9451, + "n_pred": 10582, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9537457995651315, + "FN": 255, + "FP": 213, + "IoU": 0.9115813338371433, + "TN": 1043283, + "TP": 4825, + "n_pred": 5038, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8899331460129832, + "FN": 1977, + "FP": 295, + "IoU": 0.8016932879462337, + "TN": 477759, + "TP": 9185, + "n_pred": 9480, + "n_ref": 11162 + }, + "2": { + "Dice": 0.8113207547169812, + "FN": 438, + "FP": 622, + "IoU": 0.6825396825396826, + "TN": 485877, + "TP": 2279, + "n_pred": 2901, + "n_ref": 2717 + }, + "3": { + "Dice": 0.961220597584234, + "FN": 115, + "FP": 251, + "IoU": 0.9253365973072215, + "TN": 484314, + "TP": 4536, + "n_pred": 4787, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8786773644541697, + "FN": 1230, + "FP": 267, + "IoU": 0.7836079791847355, + "TN": 482298, + "TP": 5421, + "n_pred": 5688, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8506264053967234, + "FN": 712, + "FP": 218, + "IoU": 0.7400782560089435, + "TN": 485638, + "TP": 2648, + "n_pred": 2866, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8821117375704767, + "FN": 69, + "FP": 391, + "IoU": 0.7890875745071069, + "TN": 487035, + "TP": 1721, + "n_pred": 2112, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9293404045857283, + "FN": 1244, + "FP": 981, + "IoU": 0.8680073559945424, + "TN": 463623, + "TP": 14632, + "n_pred": 15613, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8365332465560256, + "FN": 663, + "FP": 844, + "IoU": 0.719000559388402, + "TN": 475117, + "TP": 3856, + "n_pred": 4700, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9568077803203662, + "FN": 270, + "FP": 334, + "IoU": 0.9171922127776254, + "TN": 473186, + "TP": 6690, + "n_pred": 7024, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8951529114152776, + "FN": 1703, + "FP": 618, + "IoU": 0.8102052498160112, + "TN": 468251, + "TP": 9908, + "n_pred": 10526, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8455096736933295, + "FN": 1270, + "FP": 335, + "IoU": 0.7323661830915458, + "TN": 474483, + "TP": 4392, + "n_pred": 4727, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8950819672131147, + "FN": 76, + "FP": 564, + "IoU": 0.8100890207715133, + "TN": 477110, + "TP": 2730, + "n_pred": 3294, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9085037114207579, + "FN": 3231, + "FP": 282, + "IoU": 0.8323470459100888, + "TN": 623686, + "TP": 17441, + "n_pred": 17723, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8298685245533206, + "FN": 1681, + "FP": 1347, + "IoU": 0.7092096417939114, + "TN": 634227, + "TP": 7385, + "n_pred": 8732, + "n_ref": 9066 + }, + "3": { + "Dice": 0.959757808461936, + "FN": 1000, + "FP": 90, + "IoU": 0.9226291879613856, + "TN": 630552, + "TP": 12998, + "n_pred": 13088, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8332776230269267, + "FN": 4114, + "FP": 375, + "IoU": 0.7142038581524162, + "TN": 628933, + "TP": 11218, + "n_pred": 11593, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8722970577809287, + "FN": 2323, + "FP": 559, + "IoU": 0.7735166994106091, + "TN": 631915, + "TP": 9843, + "n_pred": 10402, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9461157024793388, + "FN": 407, + "FP": 408, + "IoU": 0.8977415307402761, + "TN": 636670, + "TP": 7155, + "n_pred": 7563, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9065801253357206, + "FN": 1799, + "FP": 2375, + "IoU": 0.8291235108691203, + "TN": 540053, + "TP": 20253, + "n_pred": 22628, + "n_ref": 22052 + }, + "2": { + "Dice": 0.8020904339922745, + "FN": 939, + "FP": 803, + "IoU": 0.6695751138088012, + "TN": 559208, + "TP": 3530, + "n_pred": 4333, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9578037620742247, + "FN": 361, + "FP": 303, + "IoU": 0.9190243902439025, + "TN": 556280, + "TP": 7536, + "n_pred": 7839, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7392270942717941, + "FN": 618, + "FP": 4895, + "IoU": 0.5863285060403691, + "TN": 551153, + "TP": 7814, + "n_pred": 12709, + "n_ref": 8432 + }, + "2": { + "Dice": 0.859549378816593, + "FN": 781, + "FP": 553, + "IoU": 0.7536927621861153, + "TN": 559064, + "TP": 4082, + "n_pred": 4635, + "n_ref": 4863 + }, + "3": { + "Dice": 0.9421272910953962, + "FN": 188, + "FP": 213, + "IoU": 0.8905866302864939, + "TN": 560815, + "TP": 3264, + "n_pred": 3477, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8843768996960486, + "FN": 301, + "FP": 1601, + "IoU": 0.7927201394943331, + "TN": 409704, + "TP": 7274, + "n_pred": 8875, + "n_ref": 7575 + }, + "2": { + "Dice": 0.6718307198186284, + "FN": 1078, + "FP": 659, + "IoU": 0.505832147937411, + "TN": 415365, + "TP": 1778, + "n_pred": 2437, + "n_ref": 2856 + }, + "3": { + "Dice": 0.898004681752313, + "FN": 171, + "FP": 744, + "IoU": 0.8148897430710095, + "TN": 413937, + "TP": 4028, + "n_pred": 4772, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7810931654348024, + "FN": 457, + "FP": 1942, + "IoU": 0.640814493187603, + "TN": 412201, + "TP": 4280, + "n_pred": 6222, + "n_ref": 4737 + }, + "2": { + "Dice": 0.6254351832889617, + "FN": 1466, + "FP": 363, + "IoU": 0.45500595947556616, + "TN": 415524, + "TP": 1527, + "n_pred": 1890, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8579650565262076, + "FN": 296, + "FP": 395, + "IoU": 0.7512598992080634, + "TN": 416102, + "TP": 2087, + "n_pred": 2482, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9539930555555556, + "FN": 378, + "FP": 894, + "IoU": 0.9120331950207469, + "TN": 482050, + "TP": 13188, + "n_pred": 14082, + "n_ref": 13566 + }, + "2": { + "Dice": 0.9024054532345809, + "FN": 788, + "FP": 701, + "IoU": 0.8221664875194076, + "TN": 488137, + "TP": 6884, + "n_pred": 7585, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9680329981954112, + "FN": 262, + "FP": 234, + "IoU": 0.9380464651511367, + "TN": 488504, + "TP": 7510, + "n_pred": 7744, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9308267792058316, + "FN": 1131, + "FP": 672, + "IoU": 0.8706042773073058, + "TN": 482576, + "TP": 12131, + "n_pred": 12803, + "n_ref": 13262 + }, + "2": { + "Dice": 0.917564459508534, + "FN": 896, + "FP": 466, + "IoU": 0.8476850816372177, + "TN": 487568, + "TP": 7580, + "n_pred": 8046, + "n_ref": 8476 + }, + "3": { + "Dice": 0.9414683987739016, + "FN": 175, + "FP": 226, + "IoU": 0.8894098179812465, + "TN": 492884, + "TP": 3225, + "n_pred": 3451, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_004/summary_cross_val.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_004/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..f60f04b91466cc8c930cdf09a07a17f126e20bab --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_004/summary_cross_val.json @@ -0,0 +1,4992 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8547106179111776, + "FN": 169.83333333333334, + "FP": 216.6025641025641, + "IoU": 0.7765922073444745, + "TN": 9790.5, + "TP": 1638.4487179487178, + "n_pred": 1855.051282051282, + "n_ref": 1808.282051282051 + }, + "mean": { + "1": { + "Dice": 0.7883314888088715, + "FN": 218.5, + "FP": 364.34615384615387, + "IoU": 0.6928729665926429, + "TN": 9222.846153846154, + "TP": 2009.6923076923076, + "n_pred": 2374.0384615384614, + "n_ref": 2228.1923076923076 + }, + "2": { + "Dice": 0.8384566828267649, + "FN": 198.5, + "FP": 185.57692307692307, + "IoU": 0.7501393025680683, + "TN": 10135.26923076923, + "TP": 1296.0384615384614, + "n_pred": 1481.6153846153845, + "n_ref": 1494.5384615384614 + }, + "3": { + "Dice": 0.9373436820978965, + "FN": 92.5, + "FP": 99.88461538461539, + "IoU": 0.8867643528727126, + "TN": 10013.384615384615, + "TP": 1609.6153846153845, + "n_pred": 1709.5, + "n_ref": 1702.1153846153845 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8888888888888888, + "FN": 0, + "FP": 4, + "IoU": 0.8, + "TN": 6380, + "TP": 16, + "n_pred": 20, + "n_ref": 16 + }, + "2": { + "Dice": 0.8124014713610089, + "FN": 99, + "FP": 258, + "IoU": 0.684070796460177, + "TN": 5270, + "TP": 773, + "n_pred": 1031, + "n_ref": 872 + }, + "3": { + "Dice": 0.9501257334450964, + "FN": 238, + "FP": 0, + "IoU": 0.9049900199600799, + "TN": 3895, + "TP": 2267, + "n_pred": 2267, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8686244204018547, + "FN": 5, + "FP": 250, + "IoU": 0.76775956284153, + "TN": 11702, + "TP": 843, + "n_pred": 1093, + "n_ref": 848 + }, + "2": { + "Dice": 0.9159420289855073, + "FN": 60, + "FP": 56, + "IoU": 0.8449197860962567, + "TN": 12052, + "TP": 632, + "n_pred": 688, + "n_ref": 692 + }, + "3": { + "Dice": 0.9731543624161074, + "FN": 44, + "FP": 4, + "IoU": 0.9477124183006536, + "TN": 11882, + "TP": 870, + "n_pred": 874, + "n_ref": 914 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5948460987831067, + "FN": 1125, + "FP": 7, + "IoU": 0.42333163525216505, + "TN": 10837, + "TP": 831, + "n_pred": 838, + "n_ref": 1956 + }, + "2": { + "Dice": 0.8556701030927835, + "FN": 122, + "FP": 46, + "IoU": 0.7477477477477478, + "TN": 12134, + "TP": 498, + "n_pred": 544, + "n_ref": 620 + }, + "3": { + "Dice": 0.9018112488083889, + "FN": 83, + "FP": 20, + "IoU": 0.8211805555555556, + "TN": 12224, + "TP": 473, + "n_pred": 493, + "n_ref": 556 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6436781609195402, + "FN": 302, + "FP": 1310, + "IoU": 0.4745762711864407, + "TN": 3332, + "TP": 1456, + "n_pred": 2766, + "n_ref": 1758 + }, + "2": { + "Dice": 0.8011204481792717, + "FN": 36, + "FP": 106, + "IoU": 0.6682242990654206, + "TN": 5972, + "TP": 286, + "n_pred": 392, + "n_ref": 322 + }, + "3": { + "Dice": 0.9, + "FN": 0, + "FP": 36, + "IoU": 0.8181818181818182, + "TN": 6202, + "TP": 162, + "n_pred": 198, + "n_ref": 162 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6667929532108354, + "FN": 342, + "FP": 1417, + "IoU": 0.5001420858198352, + "TN": 9281, + "TP": 1760, + "n_pred": 3177, + "n_ref": 2102 + }, + "2": { + "Dice": 0.8805460750853242, + "FN": 10, + "FP": 60, + "IoU": 0.7865853658536586, + "TN": 12472, + "TP": 258, + "n_pred": 318, + "n_ref": 268 + }, + "3": { + "Dice": 0.9354838709677419, + "FN": 6, + "FP": 10, + "IoU": 0.8787878787878788, + "TN": 12668, + "TP": 116, + "n_pred": 126, + "n_ref": 122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8909963704484253, + "FN": 491, + "FP": 440, + "IoU": 0.8034206081081081, + "TN": 14464, + "TP": 3805, + "n_pred": 4245, + "n_ref": 4296 + }, + "2": { + "Dice": 0.8994869402985075, + "FN": 731, + "FP": 131, + "IoU": 0.8173341809705446, + "TN": 14481, + "TP": 3857, + "n_pred": 3988, + "n_ref": 4588 + }, + "3": { + "Dice": 0.9737579617834395, + "FN": 66, + "FP": 140, + "IoU": 0.948857994041708, + "TN": 15172, + "TP": 3822, + "n_pred": 3962, + "n_ref": 3888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.856312292358804, + "FN": 331, + "FP": 15, + "IoU": 0.7487291212781408, + "TN": 11423, + "TP": 1031, + "n_pred": 1046, + "n_ref": 1362 + }, + "2": { + "Dice": 0.8722426470588235, + "FN": 152, + "FP": 404, + "IoU": 0.7734311328443357, + "TN": 10346, + "TP": 1898, + "n_pred": 2302, + "n_ref": 2050 + }, + "3": { + "Dice": 0.9776707894081514, + "FN": 209, + "FP": 60, + "IoU": 0.9563169860344267, + "TN": 6642, + "TP": 5889, + "n_pred": 5949, + "n_ref": 6098 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9656211871097394, + "FN": 345, + "FP": 134, + "IoU": 0.9335276158756591, + "TN": 5594, + "TP": 6727, + "n_pred": 6861, + "n_ref": 7072 + }, + "2": { + "Dice": 0.7259836937256292, + "FN": 190, + "FP": 583, + "IoU": 0.5698386199220924, + "TN": 11003, + "TP": 1024, + "n_pred": 1607, + "n_ref": 1214 + }, + "3": { + "Dice": 0.8994466704827323, + "FN": 517, + "FP": 10, + "IoU": 0.8172676837725381, + "TN": 9916, + "TP": 2357, + "n_pred": 2367, + "n_ref": 2874 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7072939690558888, + "FN": 54, + "FP": 873, + "IoU": 0.5471421592574499, + "TN": 17153, + "TP": 1120, + "n_pred": 1993, + "n_ref": 1174 + }, + "2": { + "Dice": 0.8182624113475178, + "FN": 1330, + "FP": 1130, + "IoU": 0.6924231057764441, + "TN": 11202, + "TP": 5538, + "n_pred": 6668, + "n_ref": 6868 + }, + "3": { + "Dice": 0.7896125538119706, + "FN": 85, + "FP": 1430, + "IoU": 0.6523634694814134, + "TN": 14842, + "TP": 2843, + "n_pred": 4273, + "n_ref": 2928 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9157392686804452, + "FN": 77, + "FP": 29, + "IoU": 0.844574780058651, + "TN": 18518, + "TP": 576, + "n_pred": 605, + "n_ref": 653 + }, + "2": { + "Dice": 0.9108647450110865, + "FN": 337, + "FP": 467, + "IoU": 0.8363192182410424, + "TN": 14288, + "TP": 4108, + "n_pred": 4575, + "n_ref": 4445 + }, + "3": { + "Dice": 0.7749174917491749, + "FN": 217, + "FP": 124, + "IoU": 0.6325431034482759, + "TN": 18272, + "TP": 587, + "n_pred": 711, + "n_ref": 804 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5212876427829699, + "FN": 461, + "FP": 0, + "IoU": 0.35252808988764045, + "TN": 5688, + "TP": 251, + "n_pred": 251, + "n_ref": 712 + }, + "2": { + "Dice": 0.9303671550009043, + "FN": 320, + "FP": 65, + "IoU": 0.8698004734528239, + "TN": 3443, + "TP": 2572, + "n_pred": 2637, + "n_ref": 2892 + }, + "3": { + "Dice": 0.9518440216114634, + "FN": 20, + "FP": 185, + "IoU": 0.9081129538323621, + "TN": 4169, + "TP": 2026, + "n_pred": 2211, + "n_ref": 2046 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7669724770642202, + "FN": 22, + "FP": 232, + "IoU": 0.6220238095238095, + "TN": 12128, + "TP": 418, + "n_pred": 650, + "n_ref": 440 + }, + "2": { + "Dice": 0.8868050904219692, + "FN": 235, + "FP": 103, + "IoU": 0.7966305655836342, + "TN": 11138, + "TP": 1324, + "n_pred": 1427, + "n_ref": 1559 + }, + "3": { + "Dice": 0.9610446137105549, + "FN": 24, + "FP": 155, + "IoU": 0.9250104733975701, + "TN": 10413, + "TP": 2208, + "n_pred": 2363, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 281, + "IoU": 0.0, + "TN": 12519, + "TP": 0, + "n_pred": 281, + "n_ref": 0 + }, + "2": { + "Dice": 0.9162357807652534, + "FN": 13, + "FP": 68, + "IoU": 0.8454198473282443, + "TN": 12276, + "TP": 443, + "n_pred": 511, + "n_ref": 456 + }, + "3": { + "Dice": 0.9444444444444444, + "FN": 20, + "FP": 8, + "IoU": 0.8947368421052632, + "TN": 12534, + "TP": 238, + "n_pred": 246, + "n_ref": 258 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8967320261437909, + "FN": 96, + "FP": 62, + "IoU": 0.8127962085308057, + "TN": 5556, + "TP": 686, + "n_pred": 748, + "n_ref": 782 + }, + "3": { + "Dice": 0.9774524158125915, + "FN": 14, + "FP": 63, + "IoU": 0.9558991981672395, + "TN": 4654, + "TP": 1669, + "n_pred": 1732, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7139598540145985, + "FN": 13, + "FP": 1241, + "IoU": 0.5551614047534587, + "TN": 9981, + "TP": 1565, + "n_pred": 2806, + "n_ref": 1578 + }, + "2": { + "Dice": 0.9075081610446137, + "FN": 1, + "FP": 84, + "IoU": 0.8306772908366534, + "TN": 12298, + "TP": 417, + "n_pred": 501, + "n_ref": 418 + }, + "3": { + "Dice": 0.956766917293233, + "FN": 45, + "FP": 1, + "IoU": 0.9171171171171171, + "TN": 12245, + "TP": 509, + "n_pred": 510, + "n_ref": 554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9769959404600812, + "FN": 85, + "FP": 34, + "IoU": 0.955026455026455, + "TN": 3754, + "TP": 2527, + "n_pred": 2561, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9353544360231832, + "FN": 15, + "FP": 130, + "IoU": 0.8785594639865997, + "TN": 5206, + "TP": 1049, + "n_pred": 1179, + "n_ref": 1064 + }, + "3": { + "Dice": 0.987487969201155, + "FN": 27, + "FP": 12, + "IoU": 0.9752851711026616, + "TN": 4822, + "TP": 1539, + "n_pred": 1551, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.96, + "FN": 16, + "FP": 10, + "IoU": 0.9230769230769231, + "TN": 6062, + "TP": 312, + "n_pred": 322, + "n_ref": 328 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 6398, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7634408602150538, + "FN": 242, + "FP": 2222, + "IoU": 0.6173913043478261, + "TN": 6360, + "TP": 3976, + "n_pred": 6198, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8648897058823529, + "FN": 138, + "FP": 156, + "IoU": 0.7619433198380566, + "TN": 11565, + "TP": 941, + "n_pred": 1097, + "n_ref": 1079 + }, + "3": { + "Dice": 0.9237445753254805, + "FN": 106, + "FP": 17, + "IoU": 0.8582949308755761, + "TN": 11932, + "TP": 745, + "n_pred": 762, + "n_ref": 851 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9463230672532998, + "FN": 350, + "FP": 77, + "IoU": 0.8981150083512288, + "TN": 2209, + "TP": 3764, + "n_pred": 3841, + "n_ref": 4114 + }, + "2": { + "Dice": 0.9253891572732152, + "FN": 108, + "FP": 31, + "IoU": 0.8611388611388612, + "TN": 5399, + "TP": 862, + "n_pred": 893, + "n_ref": 970 + }, + "3": { + "Dice": 0.9716494845360825, + "FN": 10, + "FP": 34, + "IoU": 0.9448621553884712, + "TN": 5602, + "TP": 754, + "n_pred": 788, + "n_ref": 764 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7777349768875192, + "FN": 812, + "FP": 342, + "IoU": 0.636306334699023, + "TN": 16027, + "TP": 2019, + "n_pred": 2361, + "n_ref": 2831 + }, + "2": { + "Dice": 0.7999141262344354, + "FN": 605, + "FP": 327, + "IoU": 0.6665474060822898, + "TN": 16405, + "TP": 1863, + "n_pred": 2190, + "n_ref": 2468 + }, + "3": { + "Dice": 0.9610454056736416, + "FN": 313, + "FP": 158, + "IoU": 0.9250119407737621, + "TN": 12919, + "TP": 5810, + "n_pred": 5968, + "n_ref": 6123 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.975722716067827, + "FN": 154, + "FP": 171, + "IoU": 0.9525962660443408, + "TN": 5944, + "TP": 6531, + "n_pred": 6702, + "n_ref": 6685 + }, + "2": { + "Dice": 0.9204975662520282, + "FN": 204, + "FP": 90, + "IoU": 0.8527054108216433, + "TN": 10804, + "TP": 1702, + "n_pred": 1792, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9794291181629724, + "FN": 67, + "FP": 62, + "IoU": 0.9596875, + "TN": 9600, + "TP": 3071, + "n_pred": 3133, + "n_ref": 3138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9607214904473715, + "FN": 404, + "FP": 258, + "IoU": 0.9244119662023293, + "TN": 16842, + "TP": 8096, + "n_pred": 8354, + "n_ref": 8500 + }, + "2": { + "Dice": 0.8598513011152417, + "FN": 348, + "FP": 406, + "IoU": 0.7541571568307792, + "TN": 22533, + "TP": 2313, + "n_pred": 2719, + "n_ref": 2661 + }, + "3": { + "Dice": 0.9523676099747829, + "FN": 274, + "FP": 66, + "IoU": 0.9090665953463493, + "TN": 21861, + "TP": 3399, + "n_pred": 3465, + "n_ref": 3673 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.981340118744699, + "FN": 50, + "FP": 126, + "IoU": 0.9633638634471274, + "TN": 1596, + "TP": 4628, + "n_pred": 4754, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9484386347131445, + "FN": 11, + "FP": 60, + "IoU": 0.9019337016574586, + "TN": 5676, + "TP": 653, + "n_pred": 713, + "n_ref": 664 + }, + "3": { + "Dice": 0.9783037475345168, + "FN": 20, + "FP": 2, + "IoU": 0.9575289575289575, + "TN": 5882, + "TP": 496, + "n_pred": 498, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.827414718006163, + "FN": 176.06410256410257, + "FP": 264.1153846153846, + "IoU": 0.7428320257560114, + "TN": 11381.282051282053, + "TP": 1470.8461538461536, + "n_pred": 1734.9615384615383, + "n_ref": 1646.9102564102566 + }, + "mean": { + "1": { + "Dice": 0.7083868932261453, + "FN": 280.53846153846155, + "FP": 433.65384615384613, + "IoU": 0.6102272919584488, + "TN": 11107.153846153846, + "TP": 1470.9615384615386, + "n_pred": 1904.6153846153845, + "n_ref": 1751.5 + }, + "2": { + "Dice": 0.8748504434575074, + "FN": 147.30769230769232, + "FP": 239.26923076923077, + "IoU": 0.7842871168069302, + "TN": 11519.192307692309, + "TP": 1386.5384615384614, + "n_pred": 1625.8076923076924, + "n_ref": 1533.8461538461538 + }, + "3": { + "Dice": 0.8990068173348359, + "FN": 100.34615384615384, + "FP": 119.42307692307692, + "IoU": 0.8339816685026551, + "TN": 11517.5, + "TP": 1555.0384615384614, + "n_pred": 1674.4615384615386, + "n_ref": 1655.3846153846155 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7415693550147332, + "FN": 281, + "FP": 4455, + "IoU": 0.5892810684242477, + "TN": 33269, + "TP": 6795, + "n_pred": 11250, + "n_ref": 7076 + }, + "2": { + "Dice": 0.859510138818228, + "FN": 527, + "FP": 1406, + "IoU": 0.7536324241651797, + "TN": 36954, + "TP": 5913, + "n_pred": 7319, + "n_ref": 6440 + }, + "3": { + "Dice": 0.9598782873288415, + "FN": 573, + "FP": 350, + "IoU": 0.9228518890003343, + "TN": 32836, + "TP": 11041, + "n_pred": 11391, + "n_ref": 11614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8026075619295958, + "FN": 3, + "FP": 754, + "IoU": 0.6702961672473867, + "TN": 10504, + "TP": 1539, + "n_pred": 2293, + "n_ref": 1542 + }, + "2": { + "Dice": 0.8135593220338984, + "FN": 140, + "FP": 146, + "IoU": 0.6857142857142857, + "TN": 11890, + "TP": 624, + "n_pred": 770, + "n_ref": 764 + }, + "3": { + "Dice": 0.9582587954680978, + "FN": 37, + "FP": 103, + "IoU": 0.9198626216370922, + "TN": 11053, + "TP": 1607, + "n_pred": 1710, + "n_ref": 1644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8113273106323836, + "FN": 1043, + "FP": 43, + "IoU": 0.6825489622917276, + "TN": 2979, + "TP": 2335, + "n_pred": 2378, + "n_ref": 3378 + }, + "2": { + "Dice": 0.9389438943894389, + "FN": 49, + "FP": 25, + "IoU": 0.8849144634525661, + "TN": 5757, + "TP": 569, + "n_pred": 594, + "n_ref": 618 + }, + "3": { + "Dice": 0.9744408945686901, + "FN": 14, + "FP": 18, + "IoU": 0.9501557632398754, + "TN": 5758, + "TP": 610, + "n_pred": 628, + "n_ref": 624 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7972649572649573, + "FN": 920, + "FP": 266, + "IoU": 0.6628766344513929, + "TN": 15682, + "TP": 2332, + "n_pred": 2598, + "n_ref": 3252 + }, + "2": { + "Dice": 0.749334122521456, + "FN": 380, + "FP": 467, + "IoU": 0.5991481306199716, + "TN": 17087, + "TP": 1266, + "n_pred": 1733, + "n_ref": 1646 + }, + "3": { + "Dice": 0.967817437097718, + "FN": 219, + "FP": 56, + "IoU": 0.937641723356009, + "TN": 14790, + "TP": 4135, + "n_pred": 4191, + "n_ref": 4354 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7804765209345362, + "FN": 915, + "FP": 34, + "IoU": 0.6399848254931715, + "TN": 10164, + "TP": 1687, + "n_pred": 1721, + "n_ref": 2602 + }, + "2": { + "Dice": 0.9550414666084679, + "FN": 70, + "FP": 33, + "IoU": 0.9139515455304928, + "TN": 11603, + "TP": 1094, + "n_pred": 1127, + "n_ref": 1164 + }, + "3": { + "Dice": 0.9914120231675654, + "FN": 16, + "FP": 27, + "IoU": 0.982970297029703, + "TN": 10275, + "TP": 2482, + "n_pred": 2509, + "n_ref": 2498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 25600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8605596747189668, + "FN": 91, + "FP": 492, + "IoU": 0.755247691015953, + "TN": 23218, + "TP": 1799, + "n_pred": 2291, + "n_ref": 1890 + }, + "3": { + "Dice": 0.8417030567685589, + "FN": 79, + "FP": 211, + "IoU": 0.7266729500471254, + "TN": 24539, + "TP": 771, + "n_pred": 982, + "n_ref": 850 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8397508493771234, + "FN": 35, + "FP": 531, + "IoU": 0.723767691556857, + "TN": 10751, + "TP": 1483, + "n_pred": 2014, + "n_ref": 1518 + }, + "2": { + "Dice": 0.9005804156524996, + "FN": 406, + "FP": 125, + "IoU": 0.819141689373297, + "TN": 9864, + "TP": 2405, + "n_pred": 2530, + "n_ref": 2811 + }, + "3": { + "Dice": 0.7931034482758621, + "FN": 12, + "FP": 144, + "IoU": 0.6571428571428571, + "TN": 12345, + "TP": 299, + "n_pred": 443, + "n_ref": 311 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9223181257706535, + "FN": 126, + "FP": 0, + "IoU": 0.8558352402745996, + "TN": 5526, + "TP": 748, + "n_pred": 748, + "n_ref": 874 + }, + "2": { + "Dice": 0.9362139917695473, + "FN": 264, + "FP": 108, + "IoU": 0.8800773694390716, + "TN": 3298, + "TP": 2730, + "n_pred": 2838, + "n_ref": 2994 + }, + "3": { + "Dice": 0.9321824907521579, + "FN": 20, + "FP": 90, + "IoU": 0.8729792147806005, + "TN": 5534, + "TP": 756, + "n_pred": 846, + "n_ref": 776 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 109, + "IoU": 0.0, + "TN": 12691, + "TP": 0, + "n_pred": 109, + "n_ref": 0 + }, + "2": { + "Dice": 0.9210573637834921, + "FN": 175, + "FP": 264, + "IoU": 0.8536666666666667, + "TN": 9800, + "TP": 2561, + "n_pred": 2825, + "n_ref": 2736 + }, + "3": { + "Dice": 0.9549689440993789, + "FN": 77, + "FP": 97, + "IoU": 0.9138187221396731, + "TN": 10781, + "TP": 1845, + "n_pred": 1942, + "n_ref": 1922 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.924924924924925, + "FN": 112, + "FP": 38, + "IoU": 0.8603351955307262, + "TN": 18126, + "TP": 924, + "n_pred": 962, + "n_ref": 1036 + }, + "2": { + "Dice": 0.9583167923779278, + "FN": 39, + "FP": 66, + "IoU": 0.9199695121951219, + "TN": 17888, + "TP": 1207, + "n_pred": 1273, + "n_ref": 1246 + }, + "3": { + "Dice": 0.9365962180200222, + "FN": 39, + "FP": 18, + "IoU": 0.8807531380753139, + "TN": 18722, + "TP": 421, + "n_pred": 439, + "n_ref": 460 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7058823529411765, + "FN": 2, + "FP": 123, + "IoU": 0.5454545454545454, + "TN": 6125, + "TP": 150, + "n_pred": 273, + "n_ref": 152 + }, + "2": { + "Dice": 0.8809946714031972, + "FN": 38, + "FP": 96, + "IoU": 0.7873015873015873, + "TN": 5770, + "TP": 496, + "n_pred": 592, + "n_ref": 534 + }, + "3": { + "Dice": 0.9486404833836858, + "FN": 4, + "FP": 30, + "IoU": 0.9022988505747126, + "TN": 6052, + "TP": 314, + "n_pred": 344, + "n_ref": 318 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.967893247068338, + "FN": 146, + "FP": 251, + "IoU": 0.9377840463877135, + "TN": 6419, + "TP": 5984, + "n_pred": 6235, + "n_ref": 6130 + }, + "2": { + "Dice": 0.8941736028537456, + "FN": 116, + "FP": 240, + "IoU": 0.8086021505376344, + "TN": 10940, + "TP": 1504, + "n_pred": 1744, + "n_ref": 1620 + }, + "3": { + "Dice": 0.9829227746713012, + "FN": 70, + "FP": 43, + "IoU": 0.9664190193164933, + "TN": 9435, + "TP": 3252, + "n_pred": 3295, + "n_ref": 3322 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8225973131243541, + "FN": 376, + "FP": 139, + "IoU": 0.6986541837331773, + "TN": 11091, + "TP": 1194, + "n_pred": 1333, + "n_ref": 1570 + }, + "2": { + "Dice": 0.8173635307781649, + "FN": 185, + "FP": 1073, + "IoU": 0.6911367542352075, + "TN": 8727, + "TP": 2815, + "n_pred": 3888, + "n_ref": 3000 + }, + "3": { + "Dice": 0.8673579941185575, + "FN": 604, + "FP": 253, + "IoU": 0.7657830008198961, + "TN": 9141, + "TP": 2802, + "n_pred": 3055, + "n_ref": 3406 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5571955719557196, + "FN": 24, + "FP": 1416, + "IoU": 0.38618925831202044, + "TN": 10454, + "TP": 906, + "n_pred": 2322, + "n_ref": 930 + }, + "2": { + "Dice": 0.8428916721599649, + "FN": 290, + "FP": 425, + "IoU": 0.7284466388150399, + "TN": 10167, + "TP": 1918, + "n_pred": 2343, + "n_ref": 2208 + }, + "3": { + "Dice": 0.9453924914675768, + "FN": 178, + "FP": 78, + "IoU": 0.8964401294498382, + "TN": 10328, + "TP": 2216, + "n_pred": 2294, + "n_ref": 2394 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7331583552055994, + "FN": 1493, + "FP": 32, + "IoU": 0.5787292817679558, + "TN": 2780, + "TP": 2095, + "n_pred": 2127, + "n_ref": 3588 + }, + "2": { + "Dice": 0.968068930562595, + "FN": 27, + "FP": 36, + "IoU": 0.9381139489194499, + "TN": 5382, + "TP": 955, + "n_pred": 991, + "n_ref": 982 + }, + "3": { + "Dice": 0.9832041343669251, + "FN": 19, + "FP": 7, + "IoU": 0.9669631512071156, + "TN": 5613, + "TP": 761, + "n_pred": 768, + "n_ref": 780 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1388, + "IoU": 0.0, + "TN": 5012, + "TP": 0, + "n_pred": 1388, + "n_ref": 0 + }, + "2": { + "Dice": 0.7428949107732981, + "FN": 14, + "FP": 375, + "IoU": 0.5909568874868559, + "TN": 5449, + "TP": 562, + "n_pred": 937, + "n_ref": 576 + }, + "3": { + "Dice": 0.5552447552447553, + "FN": 29, + "FP": 607, + "IoU": 0.38431752178121975, + "TN": 5367, + "TP": 397, + "n_pred": 1004, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.905972797161443, + "FN": 52, + "FP": 107, + "IoU": 0.8281081081081081, + "TN": 5475, + "TP": 766, + "n_pred": 873, + "n_ref": 818 + }, + "2": { + "Dice": 0.8866736621196223, + "FN": 162, + "FP": 54, + "IoU": 0.7964184731385485, + "TN": 5339, + "TP": 845, + "n_pred": 899, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9540612516644474, + "FN": 4, + "FP": 134, + "IoU": 0.9121578612348823, + "TN": 4829, + "TP": 1433, + "n_pred": 1567, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7371122994652406, + "FN": 121, + "FP": 1108, + "IoU": 0.5836720867208672, + "TN": 16248, + "TP": 1723, + "n_pred": 2831, + "n_ref": 1844 + }, + "2": { + "Dice": 0.9303621169916435, + "FN": 30, + "FP": 170, + "IoU": 0.8697916666666666, + "TN": 17664, + "TP": 1336, + "n_pred": 1506, + "n_ref": 1366 + }, + "3": { + "Dice": 0.9532100108813928, + "FN": 32, + "FP": 11, + "IoU": 0.9106029106029107, + "TN": 18719, + "TP": 438, + "n_pred": 449, + "n_ref": 470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9132783622405459, + "FN": 26, + "FP": 279, + "IoU": 0.8403976975405547, + "TN": 10889, + "TP": 1606, + "n_pred": 1885, + "n_ref": 1632 + }, + "2": { + "Dice": 0.80997798972854, + "FN": 8, + "FP": 251, + "IoU": 0.6806411837237978, + "TN": 11989, + "TP": 552, + "n_pred": 803, + "n_ref": 560 + }, + "3": { + "Dice": 0.5668233713901948, + "FN": 4, + "FP": 641, + "IoU": 0.39550140581068416, + "TN": 11733, + "TP": 422, + "n_pred": 1063, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9301960784313725, + "FN": 15, + "FP": 74, + "IoU": 0.8695014662756598, + "TN": 12118, + "TP": 593, + "n_pred": 667, + "n_ref": 608 + }, + "2": { + "Dice": 0.9145487292375425, + "FN": 305, + "FP": 122, + "IoU": 0.842551622418879, + "TN": 10088, + "TP": 2285, + "n_pred": 2407, + "n_ref": 2590 + }, + "3": { + "Dice": 0.9646993932708219, + "FN": 89, + "FP": 39, + "IoU": 0.931806073521577, + "TN": 10923, + "TP": 1749, + "n_pred": 1788, + "n_ref": 1838 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7940144961421557, + "FN": 770, + "FP": 111, + "IoU": 0.6583947266382318, + "TN": 10221, + "TP": 1698, + "n_pred": 1809, + "n_ref": 2468 + }, + "2": { + "Dice": 0.7108262108262108, + "FN": 273, + "FP": 133, + "IoU": 0.5513812154696133, + "TN": 11895, + "TP": 499, + "n_pred": 632, + "n_ref": 772 + }, + "3": { + "Dice": 0.8605914302957152, + "FN": 149, + "FP": 82, + "IoU": 0.7552966101694916, + "TN": 11856, + "TP": 713, + "n_pred": 795, + "n_ref": 862 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 12796, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + }, + "2": { + "Dice": 0.9383202099737533, + "FN": 124, + "FP": 64, + "IoU": 0.8838071693448702, + "TN": 11182, + "TP": 1430, + "n_pred": 1494, + "n_ref": 1554 + }, + "3": { + "Dice": 0.9702892885066459, + "FN": 34, + "FP": 42, + "IoU": 0.9422930903568717, + "TN": 11483, + "TP": 1241, + "n_pred": 1283, + "n_ref": 1275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8969711713903418, + "FN": 834, + "FP": 13, + "IoU": 0.8131892368769299, + "TN": 8266, + "TP": 3687, + "n_pred": 3700, + "n_ref": 4521 + }, + "2": { + "Dice": 0.8913467794404685, + "FN": 117, + "FP": 50, + "IoU": 0.8039906103286385, + "TN": 11948, + "TP": 685, + "n_pred": 735, + "n_ref": 802 + }, + "3": { + "Dice": 0.8143578238923164, + "FN": 307, + "FP": 24, + "IoU": 0.6868495742667928, + "TN": 11743, + "TP": 726, + "n_pred": 750, + "n_ref": 1033 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8489808188266791, + "FN": 262.15384615384613, + "FP": 242.21794871794873, + "IoU": 0.76153593535954, + "TN": 11660.602564102563, + "TP": 1619.6410256410256, + "n_pred": 1861.8589743589744, + "n_ref": 1881.7948717948718 + }, + "mean": { + "1": { + "Dice": 0.8176258491056776, + "FN": 263.3076923076923, + "FP": 234.23076923076923, + "IoU": 0.7384392993746123, + "TN": 11286.73076923077, + "TP": 2000.3461538461538, + "n_pred": 2234.576923076923, + "n_ref": 2263.653846153846 + }, + "2": { + "Dice": 0.8527675785234816, + "FN": 335.65384615384613, + "FP": 218.76923076923077, + "IoU": 0.7488037611456196, + "TN": 11767.807692307691, + "TP": 1462.3846153846155, + "n_pred": 1681.1538461538462, + "n_ref": 1798.0384615384614 + }, + "3": { + "Dice": 0.8765490288508783, + "FN": 187.5, + "FP": 273.65384615384613, + "IoU": 0.7973647455583881, + "TN": 11927.26923076923, + "TP": 1396.1923076923076, + "n_pred": 1669.8461538461538, + "n_ref": 1583.6923076923076 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8935185185185185, + "FN": 55, + "FP": 83, + "IoU": 0.8075313807531381, + "TN": 5683, + "TP": 579, + "n_pred": 662, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8422730682670667, + "FN": 2772, + "FP": 592, + "IoU": 0.7275230843998056, + "TN": 38854, + "TP": 8982, + "n_pred": 9574, + "n_ref": 11754 + }, + "2": { + "Dice": 0.7747099559312888, + "FN": 887, + "FP": 1618, + "IoU": 0.6322665883734586, + "TN": 44388, + "TP": 4307, + "n_pred": 5925, + "n_ref": 5194 + }, + "3": { + "Dice": 0.872087339090761, + "FN": 246, + "FP": 2894, + "IoU": 0.7731869401906963, + "TN": 37356, + "TP": 10704, + "n_pred": 13598, + "n_ref": 10950 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7898986932902657, + "FN": 1426, + "FP": 5, + "IoU": 0.6527541858772142, + "TN": 8679, + "TP": 2690, + "n_pred": 2695, + "n_ref": 4116 + }, + "2": { + "Dice": 0.8938861560084329, + "FN": 24, + "FP": 127, + "IoU": 0.8081321473951716, + "TN": 12013, + "TP": 636, + "n_pred": 763, + "n_ref": 660 + }, + "3": { + "Dice": 0.9182389937106918, + "FN": 74, + "FP": 4, + "IoU": 0.8488372093023255, + "TN": 12284, + "TP": 438, + "n_pred": 442, + "n_ref": 512 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8969162995594714, + "FN": 52, + "FP": 182, + "IoU": 0.8130990415335463, + "TN": 11548, + "TP": 1018, + "n_pred": 1200, + "n_ref": 1070 + }, + "3": { + "Dice": 0.9669889963321107, + "FN": 72, + "FP": 27, + "IoU": 0.9360877985797289, + "TN": 11251, + "TP": 1450, + "n_pred": 1477, + "n_ref": 1522 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.700152207001522, + "FN": 0, + "FP": 197, + "IoU": 0.5386416861826698, + "TN": 5973, + "TP": 230, + "n_pred": 427, + "n_ref": 230 + }, + "2": { + "Dice": 0.7765346235258542, + "FN": 536, + "FP": 203, + "IoU": 0.6347009391992091, + "TN": 4377, + "TP": 1284, + "n_pred": 1487, + "n_ref": 1820 + }, + "3": { + "Dice": 0.9208163265306123, + "FN": 154, + "FP": 40, + "IoU": 0.8532526475037822, + "TN": 5078, + "TP": 1128, + "n_pred": 1168, + "n_ref": 1282 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8488745980707395, + "FN": 8, + "FP": 39, + "IoU": 0.7374301675977654, + "TN": 6221, + "TP": 132, + "n_pred": 171, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8883263009845288, + "FN": 303, + "FP": 94, + "IoU": 0.7990890688259109, + "TN": 17224, + "TP": 1579, + "n_pred": 1673, + "n_ref": 1882 + }, + "2": { + "Dice": 0.8324208266237252, + "FN": 1361, + "FP": 200, + "IoU": 0.7129459360058845, + "TN": 13762, + "TP": 3877, + "n_pred": 4077, + "n_ref": 5238 + }, + "3": { + "Dice": 0.7638371645049441, + "FN": 1746, + "FP": 93, + "IoU": 0.6179098275503844, + "TN": 14387, + "TP": 2974, + "n_pred": 3067, + "n_ref": 4720 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6207744314689613, + "FN": 573, + "FP": 44, + "IoU": 0.4500891265597148, + "TN": 24478, + "TP": 505, + "n_pred": 549, + "n_ref": 1078 + }, + "2": { + "Dice": 0.8541033434650456, + "FN": 2957, + "FP": 787, + "IoU": 0.7453580901856764, + "TN": 10897, + "TP": 10959, + "n_pred": 11746, + "n_ref": 13916 + }, + "3": { + "Dice": 0.5719703499396656, + "FN": 895, + "FP": 1588, + "IoU": 0.4005311443746982, + "TN": 21458, + "TP": 1659, + "n_pred": 3247, + "n_ref": 2554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.967741935483871, + "FN": 101, + "FP": 0, + "IoU": 0.9375, + "TN": 4784, + "TP": 1515, + "n_pred": 1515, + "n_ref": 1616 + }, + "2": { + "Dice": 0.8611295681063122, + "FN": 78, + "FP": 131, + "IoU": 0.7561260210035006, + "TN": 5543, + "TP": 648, + "n_pred": 779, + "n_ref": 726 + }, + "3": { + "Dice": 0.855916286557553, + "FN": 63, + "FP": 474, + "IoU": 0.74812382739212, + "TN": 4268, + "TP": 1595, + "n_pred": 2069, + "n_ref": 1658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5033670033670034, + "FN": 203, + "FP": 387, + "IoU": 0.3363329583802025, + "TN": 18311, + "TP": 299, + "n_pred": 686, + "n_ref": 502 + }, + "2": { + "Dice": 0.7876830318690784, + "FN": 393, + "FP": 593, + "IoU": 0.6497335701598579, + "TN": 16385, + "TP": 1829, + "n_pred": 2422, + "n_ref": 2222 + }, + "3": { + "Dice": 0.7774371551195586, + "FN": 4, + "FP": 359, + "IoU": 0.6359077231695085, + "TN": 18203, + "TP": 634, + "n_pred": 993, + "n_ref": 638 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 824, + "IoU": 0.0, + "TN": 5576, + "TP": 0, + "n_pred": 824, + "n_ref": 0 + }, + "2": { + "Dice": 0.8439661798616449, + "FN": 105, + "FP": 98, + "IoU": 0.7300531914893617, + "TN": 5648, + "TP": 549, + "n_pred": 647, + "n_ref": 654 + }, + "3": { + "Dice": 0.9752475247524752, + "FN": 33, + "FP": 57, + "IoU": 0.9516908212560387, + "TN": 4537, + "TP": 1773, + "n_pred": 1830, + "n_ref": 1806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9657387580299786, + "FN": 17, + "FP": 15, + "IoU": 0.9337474120082816, + "TN": 12317, + "TP": 451, + "n_pred": 466, + "n_ref": 468 + }, + "2": { + "Dice": 0.7562043795620438, + "FN": 1091, + "FP": 78, + "IoU": 0.607981220657277, + "TN": 9818, + "TP": 1813, + "n_pred": 1891, + "n_ref": 2904 + }, + "3": { + "Dice": 0.6287905193447194, + "FN": 964, + "FP": 101, + "IoU": 0.45856634468734114, + "TN": 10833, + "TP": 902, + "n_pred": 1003, + "n_ref": 1866 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9783059499122667, + "FN": 169, + "FP": 103, + "IoU": 0.9575331772053084, + "TN": 19195, + "TP": 6133, + "n_pred": 6236, + "n_ref": 6302 + }, + "2": { + "Dice": 0.8522829006266786, + "FN": 201, + "FP": 294, + "IoU": 0.7425897035881436, + "TN": 23677, + "TP": 1428, + "n_pred": 1722, + "n_ref": 1629 + }, + "3": { + "Dice": 0.959272439699486, + "FN": 44, + "FP": 162, + "IoU": 0.9217325227963525, + "TN": 22968, + "TP": 2426, + "n_pred": 2588, + "n_ref": 2470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.75, + "FN": 22, + "FP": 900, + "IoU": 0.6, + "TN": 10495, + "TP": 1383, + "n_pred": 2283, + "n_ref": 1405 + }, + "2": { + "Dice": 0.9055523755008587, + "FN": 71, + "FP": 94, + "IoU": 0.8274058577405857, + "TN": 11844, + "TP": 791, + "n_pred": 885, + "n_ref": 862 + }, + "3": { + "Dice": 0.9594298245614035, + "FN": 49, + "FP": 25, + "IoU": 0.9220231822971549, + "TN": 11851, + "TP": 875, + "n_pred": 900, + "n_ref": 924 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7109375, + "FN": 0, + "FP": 74, + "IoU": 0.5515151515151515, + "TN": 6235, + "TP": 91, + "n_pred": 165, + "n_ref": 91 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9294429708222812, + "FN": 93, + "FP": 40, + "IoU": 0.8681863230921705, + "TN": 5391, + "TP": 876, + "n_pred": 916, + "n_ref": 969 + }, + "3": { + "Dice": 0.9841503870254331, + "FN": 30, + "FP": 13, + "IoU": 0.9687953555878084, + "TN": 5022, + "TP": 1335, + "n_pred": 1348, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9528005034612964, + "FN": 62, + "FP": 88, + "IoU": 0.9098557692307693, + "TN": 17536, + "TP": 1514, + "n_pred": 1602, + "n_ref": 1576 + }, + "2": { + "Dice": 0.9516407599309153, + "FN": 66, + "FP": 46, + "IoU": 0.9077429983525536, + "TN": 17986, + "TP": 1102, + "n_pred": 1148, + "n_ref": 1168 + }, + "3": { + "Dice": 0.9679633867276888, + "FN": 12, + "FP": 44, + "IoU": 0.9379157427937915, + "TN": 18298, + "TP": 846, + "n_pred": 890, + "n_ref": 858 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9551490854422451, + "FN": 133, + "FP": 46, + "IoU": 0.9141486810551559, + "TN": 10715, + "TP": 1906, + "n_pred": 1952, + "n_ref": 2039 + }, + "2": { + "Dice": 0.8722186904005086, + "FN": 106, + "FP": 95, + "IoU": 0.7733934611048479, + "TN": 11913, + "TP": 686, + "n_pred": 781, + "n_ref": 792 + }, + "3": { + "Dice": 0.9361194029850747, + "FN": 95, + "FP": 12, + "IoU": 0.8799102132435466, + "TN": 11909, + "TP": 784, + "n_pred": 796, + "n_ref": 879 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.973786949247072, + "FN": 516, + "FP": 236, + "IoU": 0.9489130434782609, + "TN": 10880, + "TP": 13968, + "n_pred": 14204, + "n_ref": 14484 + }, + "2": { + "Dice": 0.9316770186335404, + "FN": 109, + "FP": 78, + "IoU": 0.872093023255814, + "TN": 24138, + "TP": 1275, + "n_pred": 1353, + "n_ref": 1384 + }, + "3": { + "Dice": 0.9389567147613762, + "FN": 17, + "FP": 38, + "IoU": 0.8849372384937239, + "TN": 25122, + "TP": 423, + "n_pred": 461, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.78234615043069, + "FN": 169, + "FP": 2282, + "IoU": 0.6425029171528588, + "TN": 18744, + "TP": 4405, + "n_pred": 6687, + "n_ref": 4574 + }, + "2": { + "Dice": 0.8681825409445063, + "FN": 444, + "FP": 385, + "IoU": 0.7670694015172801, + "TN": 22041, + "TP": 2730, + "n_pred": 3115, + "n_ref": 3174 + }, + "3": { + "Dice": 0.890727969348659, + "FN": 75, + "FP": 638, + "IoU": 0.8029842497927604, + "TN": 21981, + "TP": 2906, + "n_pred": 3544, + "n_ref": 2981 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9641025641025641, + "FN": 12, + "FP": 44, + "IoU": 0.9306930693069307, + "TN": 5592, + "TP": 752, + "n_pred": 796, + "n_ref": 764 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8658131816026553, + "FN": 233, + "FP": 50, + "IoU": 0.7633779264214047, + "TN": 5204, + "TP": 913, + "n_pred": 963, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7670940170940171, + "FN": 73, + "FP": 363, + "IoU": 0.6221837088388215, + "TN": 5246, + "TP": 718, + "n_pred": 1081, + "n_ref": 791 + }, + "3": { + "Dice": 0.7414030261348006, + "FN": 231, + "FP": 521, + "IoU": 0.5890710382513661, + "TN": 4570, + "TP": 1078, + "n_pred": 1599, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9812468322351748, + "FN": 29, + "FP": 45, + "IoU": 0.96318407960199, + "TN": 4390, + "TP": 1936, + "n_pred": 1981, + "n_ref": 1965 + }, + "2": { + "Dice": 0.9085714285714286, + "FN": 63, + "FP": 129, + "IoU": 0.8324607329842932, + "TN": 5254, + "TP": 954, + "n_pred": 1083, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9819187406934695, + "FN": 63, + "FP": 22, + "IoU": 0.9644797325532805, + "TN": 4007, + "TP": 2308, + "n_pred": 2330, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9771748492678726, + "FN": 51, + "FP": 55, + "IoU": 0.9553684210526315, + "TN": 4025, + "TP": 2269, + "n_pred": 2324, + "n_ref": 2320 + }, + "2": { + "Dice": 0.9368575624082232, + "FN": 9, + "FP": 34, + "IoU": 0.8812154696132597, + "TN": 6038, + "TP": 319, + "n_pred": 353, + "n_ref": 328 + }, + "3": { + "Dice": 0.9197080291970803, + "FN": 8, + "FP": 3, + "IoU": 0.8513513513513513, + "TN": 6326, + "TP": 63, + "n_pred": 66, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.8534444274931289, + "FN": 401.9259259259259, + "FP": 210.55555555555557, + "IoU": 0.7637066335205908, + "TN": 12247.506172839507, + "TP": 1836.3086419753083, + "n_pred": 2046.8641975308644, + "n_ref": 2238.2345679012346 + }, + "mean": { + "1": { + "Dice": 0.8057387945289101, + "FN": 574.1111111111111, + "FP": 234.11111111111111, + "IoU": 0.7052077938042164, + "TN": 11843.074074074075, + "TP": 2045.0, + "n_pred": 2279.1111111111113, + "n_ref": 2619.1111111111113 + }, + "2": { + "Dice": 0.855140127085744, + "FN": 257.81481481481484, + "FP": 242.77777777777777, + "IoU": 0.7553334270046076, + "TN": 12697.37037037037, + "TP": 1498.3333333333333, + "n_pred": 1741.111111111111, + "n_ref": 1756.148148148148 + }, + "3": { + "Dice": 0.8994543608647322, + "FN": 373.85185185185185, + "FP": 154.77777777777777, + "IoU": 0.8305786797529485, + "TN": 12202.074074074075, + "TP": 1965.5925925925926, + "n_pred": 2120.3703703703704, + "n_ref": 2339.4444444444443 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.5078125, + "FN": 1008, + "FP": 0, + "IoU": 0.3403141361256545, + "TN": 17672, + "TP": 520, + "n_pred": 520, + "n_ref": 1528 + }, + "2": { + "Dice": 0.6476793248945147, + "FN": 24, + "FP": 644, + "IoU": 0.4789391575663027, + "TN": 17918, + "TP": 614, + "n_pred": 1258, + "n_ref": 638 + }, + "3": { + "Dice": 0.7196428571428571, + "FN": 13, + "FP": 929, + "IoU": 0.5620641562064156, + "TN": 17049, + "TP": 1209, + "n_pred": 2138, + "n_ref": 1222 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.755933888405617, + "FN": 3763, + "FP": 165, + "IoU": 0.6076316052342423, + "TN": 21989, + "TP": 6083, + "n_pred": 6248, + "n_ref": 9846 + }, + "2": { + "Dice": 0.7932453526323258, + "FN": 583, + "FP": 874, + "IoU": 0.6573377234242709, + "TN": 27748, + "TP": 2795, + "n_pred": 3669, + "n_ref": 3378 + }, + "3": { + "Dice": 0.8434281566172134, + "FN": 2895, + "FP": 556, + "IoU": 0.7292483916522831, + "TN": 19254, + "TP": 9295, + "n_pred": 9851, + "n_ref": 12190 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5321589987252289, + "FN": 3746, + "FP": 291, + "IoU": 0.3625453971261645, + "TN": 25667, + "TP": 2296, + "n_pred": 2587, + "n_ref": 6042 + }, + "2": { + "Dice": 0.7089799850155196, + "FN": 1778, + "FP": 941, + "IoU": 0.5491626595921074, + "TN": 25969, + "TP": 3312, + "n_pred": 4253, + "n_ref": 5090 + }, + "3": { + "Dice": 0.6491899852724595, + "FN": 3820, + "FP": 944, + "IoU": 0.4805931094635848, + "TN": 22828, + "TP": 4408, + "n_pred": 5352, + "n_ref": 8228 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9417234965902046, + "FN": 326, + "FP": 238, + "IoU": 0.8898652606912713, + "TN": 7679, + "TP": 4557, + "n_pred": 4795, + "n_ref": 4883 + }, + "2": { + "Dice": 0.8787301587301587, + "FN": 155, + "FP": 227, + "IoU": 0.7836919592298981, + "TN": 11034, + "TP": 1384, + "n_pred": 1611, + "n_ref": 1539 + }, + "3": { + "Dice": 0.9731934731934732, + "FN": 71, + "FP": 67, + "IoU": 0.9477866061293984, + "TN": 10157, + "TP": 2505, + "n_pred": 2572, + "n_ref": 2576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 12798, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + }, + "2": { + "Dice": 0.9145808502185141, + "FN": 147, + "FP": 68, + "IoU": 0.842606149341142, + "TN": 11434, + "TP": 1151, + "n_pred": 1219, + "n_ref": 1298 + }, + "3": { + "Dice": 0.983320811419985, + "FN": 34, + "FP": 77, + "IoU": 0.967188885604493, + "TN": 9417, + "TP": 3272, + "n_pred": 3349, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9185705916813123, + "FN": 171, + "FP": 107, + "IoU": 0.8494041170097508, + "TN": 4554, + "TP": 1568, + "n_pred": 1675, + "n_ref": 1739 + }, + "3": { + "Dice": 0.9509981851179673, + "FN": 69, + "FP": 39, + "IoU": 0.9065743944636678, + "TN": 5244, + "TP": 1048, + "n_pred": 1087, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7924253459577567, + "FN": 188, + "FP": 97, + "IoU": 0.6562123039806996, + "TN": 11971, + "TP": 544, + "n_pred": 641, + "n_ref": 732 + }, + "3": { + "Dice": 0.8843258042436687, + "FN": 58, + "FP": 111, + "IoU": 0.7926380368098159, + "TN": 11985, + "TP": 646, + "n_pred": 757, + "n_ref": 704 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9654778887303852, + "FN": 164, + "FP": 78, + "IoU": 0.9332597904026475, + "TN": 9174, + "TP": 3384, + "n_pred": 3462, + "n_ref": 3548 + }, + "2": { + "Dice": 0.9279796048438496, + "FN": 66, + "FP": 47, + "IoU": 0.8656361474435196, + "TN": 11959, + "TP": 728, + "n_pred": 775, + "n_ref": 794 + }, + "3": { + "Dice": 0.9775474956822107, + "FN": 35, + "FP": 4, + "IoU": 0.956081081081081, + "TN": 11912, + "TP": 849, + "n_pred": 853, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9121495327102803, + "FN": 98, + "FP": 43, + "IoU": 0.8384879725085911, + "TN": 31127, + "TP": 732, + "n_pred": 775, + "n_ref": 830 + }, + "2": { + "Dice": 0.9296453720738438, + "FN": 827, + "FP": 282, + "IoU": 0.8685395922238027, + "TN": 23564, + "TP": 7327, + "n_pred": 7609, + "n_ref": 8154 + }, + "3": { + "Dice": 0.8695235815178358, + "FN": 206, + "FP": 339, + "IoU": 0.7691656077933079, + "TN": 29639, + "TP": 1816, + "n_pred": 2155, + "n_ref": 2022 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.925061762283832, + "FN": 453, + "FP": 93, + "IoU": 0.8605720122574055, + "TN": 15284, + "TP": 3370, + "n_pred": 3463, + "n_ref": 3823 + }, + "2": { + "Dice": 0.9294692012049445, + "FN": 273, + "FP": 406, + "IoU": 0.8682320978071026, + "TN": 14047, + "TP": 4474, + "n_pred": 4880, + "n_ref": 4747 + }, + "3": { + "Dice": 0.9596891694997571, + "FN": 274, + "FP": 58, + "IoU": 0.9225023342670402, + "TN": 14916, + "TP": 3952, + "n_pred": 4010, + "n_ref": 4226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8003573023671282, + "FN": 430, + "FP": 17, + "IoU": 0.6671630677587491, + "TN": 11457, + "TP": 896, + "n_pred": 913, + "n_ref": 1326 + }, + "2": { + "Dice": 0.8191017219953843, + "FN": 575, + "FP": 444, + "IoU": 0.6936259771497294, + "TN": 9474, + "TP": 2307, + "n_pred": 2751, + "n_ref": 2882 + }, + "3": { + "Dice": 0.7313834559483222, + "FN": 1460, + "FP": 37, + "IoU": 0.5765205091937765, + "TN": 9265, + "TP": 2038, + "n_pred": 2075, + "n_ref": 3498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6083460949464012, + "FN": 55, + "FP": 1991, + "IoU": 0.4371389270976616, + "TN": 15565, + "TP": 1589, + "n_pred": 3580, + "n_ref": 1644 + }, + "2": { + "Dice": 0.8281938325991189, + "FN": 488, + "FP": 760, + "IoU": 0.706766917293233, + "TN": 14944, + "TP": 3008, + "n_pred": 3768, + "n_ref": 3496 + }, + "3": { + "Dice": 0.9689841912368032, + "FN": 215, + "FP": 352, + "IoU": 0.9398344651952462, + "TN": 9776, + "TP": 8857, + "n_pred": 9209, + "n_ref": 9072 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.33157199471598414, + "FN": 453, + "FP": 559, + "IoU": 0.19873317498020585, + "TN": 11537, + "TP": 251, + "n_pred": 810, + "n_ref": 704 + }, + "2": { + "Dice": 0.688034188034188, + "FN": 17, + "FP": 421, + "IoU": 0.5244299674267101, + "TN": 11879, + "TP": 483, + "n_pred": 904, + "n_ref": 500 + }, + "3": { + "Dice": 0.983399209486166, + "FN": 56, + "FP": 7, + "IoU": 0.9673405909797823, + "TN": 10871, + "TP": 1866, + "n_pred": 1873, + "n_ref": 1922 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7462523848460071, + "FN": 55, + "FP": 876, + "IoU": 0.5952173913043478, + "TN": 10500, + "TP": 1369, + "n_pred": 2245, + "n_ref": 1424 + }, + "2": { + "Dice": 0.9303595812471552, + "FN": 46, + "FP": 107, + "IoU": 0.8697872340425532, + "TN": 11625, + "TP": 1022, + "n_pred": 1129, + "n_ref": 1068 + }, + "3": { + "Dice": 0.9804788213627993, + "FN": 19, + "FP": 34, + "IoU": 0.9617052023121387, + "TN": 11416, + "TP": 1331, + "n_pred": 1365, + "n_ref": 1350 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7397260273972602, + "FN": 10, + "FP": 28, + "IoU": 0.5869565217391305, + "TN": 6308, + "TP": 54, + "n_pred": 82, + "n_ref": 64 + }, + "2": { + "Dice": 0.8883632923368022, + "FN": 133, + "FP": 103, + "IoU": 0.7991489361702128, + "TN": 5225, + "TP": 939, + "n_pred": 1042, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9719806763285024, + "FN": 42, + "FP": 74, + "IoU": 0.9454887218045113, + "TN": 4272, + "TP": 2012, + "n_pred": 2086, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.88360814742968, + "FN": 175, + "FP": 305, + "IoU": 0.7914856646394439, + "TN": 10498, + "TP": 1822, + "n_pred": 2127, + "n_ref": 1997 + }, + "2": { + "Dice": 0.9053308823529411, + "FN": 47, + "FP": 159, + "IoU": 0.8270361041141897, + "TN": 11609, + "TP": 985, + "n_pred": 1144, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9231770833333334, + "FN": 97, + "FP": 21, + "IoU": 0.8573155985489722, + "TN": 11973, + "TP": 709, + "n_pred": 730, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8196341745774485, + "FN": 1546, + "FP": 12, + "IoU": 0.6943899568458219, + "TN": 1302, + "TP": 3540, + "n_pred": 3552, + "n_ref": 5086 + }, + "2": { + "Dice": 0.9501187648456056, + "FN": 18, + "FP": 24, + "IoU": 0.9049773755656109, + "TN": 5958, + "TP": 400, + "n_pred": 424, + "n_ref": 418 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9787905508887548, + "FN": 383, + "FP": 74, + "IoU": 0.9584620978003999, + "TN": 14598, + "TP": 10545, + "n_pred": 10619, + "n_ref": 10928 + }, + "2": { + "Dice": 0.7722036417688591, + "FN": 471, + "FP": 142, + "IoU": 0.6289346246973365, + "TN": 23948, + "TP": 1039, + "n_pred": 1181, + "n_ref": 1510 + }, + "3": { + "Dice": 0.8455153949129853, + "FN": 537, + "FP": 40, + "IoU": 0.7323747680890538, + "TN": 23444, + "TP": 1579, + "n_pred": 1619, + "n_ref": 2116 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9269949066213922, + "FN": 29, + "FP": 14, + "IoU": 0.8639240506329114, + "TN": 6084, + "TP": 273, + "n_pred": 287, + "n_ref": 302 + }, + "2": { + "Dice": 0.8928399807784719, + "FN": 121, + "FP": 102, + "IoU": 0.8064236111111112, + "TN": 5248, + "TP": 929, + "n_pred": 1031, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9710982658959537, + "FN": 76, + "FP": 9, + "IoU": 0.9438202247191011, + "TN": 4887, + "TP": 1428, + "n_pred": 1437, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7875109938434477, + "FN": 2316, + "FP": 100, + "IoU": 0.6494994922385028, + "TN": 5907, + "TP": 4477, + "n_pred": 4577, + "n_ref": 6793 + }, + "2": { + "Dice": 0.8416905444126075, + "FN": 236, + "FP": 206, + "IoU": 0.7266542980828695, + "TN": 11183, + "TP": 1175, + "n_pred": 1381, + "n_ref": 1411 + }, + "3": { + "Dice": 0.9530201342281879, + "FN": 42, + "FP": 119, + "IoU": 0.9102564102564102, + "TN": 11006, + "TP": 1633, + "n_pred": 1752, + "n_ref": 1675 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9719626168224299, + "FN": 160, + "FP": 29, + "IoU": 0.9454545454545454, + "TN": 2935, + "TP": 3276, + "n_pred": 3305, + "n_ref": 3436 + }, + "2": { + "Dice": 0.8888888888888888, + "FN": 4, + "FP": 23, + "IoU": 0.8, + "TN": 6265, + "TP": 108, + "n_pred": 131, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9244935543278084, + "FN": 140, + "FP": 352, + "IoU": 0.8595890410958904, + "TN": 9296, + "TP": 3012, + "n_pred": 3364, + "n_ref": 3152 + }, + "2": { + "Dice": 0.8799845141308555, + "FN": 389, + "FP": 231, + "IoU": 0.7856895955755271, + "TN": 9907, + "TP": 2273, + "n_pred": 2504, + "n_ref": 2662 + }, + "3": { + "Dice": 0.9456598447424136, + "FN": 52, + "FP": 102, + "IoU": 0.8969210174029452, + "TN": 11306, + "TP": 1340, + "n_pred": 1442, + "n_ref": 1392 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8790931989924433, + "FN": 135, + "FP": 345, + "IoU": 0.7842696629213484, + "TN": 4175, + "TP": 1745, + "n_pred": 2090, + "n_ref": 1880 + }, + "2": { + "Dice": 0.8645833333333334, + "FN": 53, + "FP": 77, + "IoU": 0.7614678899082569, + "TN": 5855, + "TP": 415, + "n_pred": 492, + "n_ref": 468 + }, + "3": { + "Dice": 0.7535410764872521, + "FN": 9, + "FP": 165, + "IoU": 0.6045454545454545, + "TN": 5960, + "TP": 266, + "n_pred": 431, + "n_ref": 275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7875934644142897, + "FN": 56, + "FP": 711, + "IoU": 0.6496116948378254, + "TN": 23411, + "TP": 1422, + "n_pred": 2133, + "n_ref": 1478 + }, + "2": { + "Dice": 0.9323640960809102, + "FN": 151, + "FP": 63, + "IoU": 0.8732978093546477, + "TN": 23911, + "TP": 1475, + "n_pred": 1538, + "n_ref": 1626 + }, + "3": { + "Dice": 0.9488982653539616, + "FN": 14, + "FP": 95, + "IoU": 0.9027653880463872, + "TN": 24479, + "TP": 1012, + "n_pred": 1107, + "n_ref": 1026 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8339724726598418, + "FN": 241.58974358974362, + "FP": 144.17948717948718, + "IoU": 0.7461684470259522, + "TN": 10543.705128205127, + "TP": 1378.2179487179485, + "n_pred": 1522.3974358974358, + "n_ref": 1619.8076923076924 + }, + "mean": { + "1": { + "Dice": 0.7256913447255153, + "FN": 512.1153846153846, + "FP": 102.3076923076923, + "IoU": 0.6206655584092611, + "TN": 10248.115384615385, + "TP": 1445.1538461538462, + "n_pred": 1547.4615384615386, + "n_ref": 1957.2692307692307 + }, + "2": { + "Dice": 0.8613486722711772, + "FN": 142.6153846153846, + "FP": 209.0, + "IoU": 0.7628206584154608, + "TN": 10781.423076923076, + "TP": 1174.6538461538462, + "n_pred": 1383.6538461538462, + "n_ref": 1317.2692307692307 + }, + "3": { + "Dice": 0.9148774009828327, + "FN": 70.03846153846153, + "FP": 121.23076923076923, + "IoU": 0.8550191242531351, + "TN": 10601.576923076924, + "TP": 1514.8461538461538, + "n_pred": 1636.076923076923, + "n_ref": 1584.8846153846155 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9217456734386757, + "FN": 53, + "FP": 155, + "IoU": 0.8548499651081647, + "TN": 4967, + "TP": 1225, + "n_pred": 1380, + "n_ref": 1278 + }, + "3": { + "Dice": 0.9830653804930333, + "FN": 49, + "FP": 30, + "IoU": 0.9666947723440135, + "TN": 4028, + "TP": 2293, + "n_pred": 2323, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9703179147205062, + "FN": 178, + "FP": 19, + "IoU": 0.9423470880889669, + "TN": 15783, + "TP": 3220, + "n_pred": 3239, + "n_ref": 3398 + }, + "2": { + "Dice": 0.884405831247239, + "FN": 387, + "FP": 398, + "IoU": 0.792766631467793, + "TN": 15412, + "TP": 3003, + "n_pred": 3401, + "n_ref": 3390 + }, + "3": { + "Dice": 0.9756906782364576, + "FN": 228, + "FP": 153, + "IoU": 0.952535193721191, + "TN": 11173, + "TP": 7646, + "n_pred": 7799, + "n_ref": 7874 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8737864077669902, + "FN": 3, + "FP": 10, + "IoU": 0.7758620689655172, + "TN": 6342, + "TP": 45, + "n_pred": 55, + "n_ref": 48 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9819963779695323, + "FN": 57, + "FP": 112, + "IoU": 0.9646295521138551, + "TN": 1622, + "TP": 4609, + "n_pred": 4721, + "n_ref": 4666 + }, + "2": { + "Dice": 0.9126819126819127, + "FN": 45, + "FP": 39, + "IoU": 0.8393881453154876, + "TN": 5877, + "TP": 439, + "n_pred": 478, + "n_ref": 484 + }, + "3": { + "Dice": 0.9823484267075978, + "FN": 6, + "FP": 17, + "IoU": 0.9653092006033183, + "TN": 5737, + "TP": 640, + "n_pred": 657, + "n_ref": 646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9785600847009, + "FN": 127, + "FP": 35, + "IoU": 0.9580202124902825, + "TN": 8941, + "TP": 3697, + "n_pred": 3732, + "n_ref": 3824 + }, + "2": { + "Dice": 0.8676429953025697, + "FN": 307, + "FP": 172, + "IoU": 0.7662274280136652, + "TN": 10751, + "TP": 1570, + "n_pred": 1742, + "n_ref": 1877 + }, + "3": { + "Dice": 0.9656705359347987, + "FN": 16, + "FP": 262, + "IoU": 0.9336198662846227, + "TN": 8612, + "TP": 3910, + "n_pred": 4172, + "n_ref": 3926 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6486915146708961, + "FN": 2183, + "FP": 32, + "IoU": 0.4800469483568075, + "TN": 14940, + "TP": 2045, + "n_pred": 2077, + "n_ref": 4228 + }, + "2": { + "Dice": 0.8892142508540751, + "FN": 185, + "FP": 42, + "IoU": 0.8005272407732865, + "TN": 18062, + "TP": 911, + "n_pred": 953, + "n_ref": 1096 + }, + "3": { + "Dice": 0.9581120943952802, + "FN": 14, + "FP": 57, + "IoU": 0.9195922989807475, + "TN": 18317, + "TP": 812, + "n_pred": 869, + "n_ref": 826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.797699424856214, + "FN": 97, + "FP": 712, + "IoU": 0.663477537437604, + "TN": 10396, + "TP": 1595, + "n_pred": 2307, + "n_ref": 1692 + }, + "3": { + "Dice": 0.9422946367956552, + "FN": 16, + "FP": 69, + "IoU": 0.8908857509627728, + "TN": 12021, + "TP": 694, + "n_pred": 763, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8288030519790176, + "FN": 205, + "FP": 872, + "IoU": 0.7076547231270358, + "TN": 21916, + "TP": 2607, + "n_pred": 3479, + "n_ref": 2812 + }, + "2": { + "Dice": 0.8533846647417388, + "FN": 546, + "FP": 1282, + "IoU": 0.7442641298265249, + "TN": 18452, + "TP": 5320, + "n_pred": 6602, + "n_ref": 5866 + }, + "3": { + "Dice": 0.6654428636989445, + "FN": 193, + "FP": 1265, + "IoU": 0.4986244841815681, + "TN": 22692, + "TP": 1450, + "n_pred": 2715, + "n_ref": 1643 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8131680205215904, + "FN": 433, + "FP": 4, + "IoU": 0.6851585014409222, + "TN": 11412, + "TP": 951, + "n_pred": 955, + "n_ref": 1384 + }, + "2": { + "Dice": 0.8985626283367556, + "FN": 68, + "FP": 179, + "IoU": 0.8158090976882924, + "TN": 11459, + "TP": 1094, + "n_pred": 1273, + "n_ref": 1162 + }, + "3": { + "Dice": 0.9654471544715447, + "FN": 4, + "FP": 64, + "IoU": 0.9332023575638507, + "TN": 11782, + "TP": 950, + "n_pred": 1014, + "n_ref": 954 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 200, + "IoU": 0.0, + "TN": 19000, + "TP": 0, + "n_pred": 200, + "n_ref": 0 + }, + "2": { + "Dice": 0.941034897713598, + "FN": 19, + "FP": 30, + "IoU": 0.8886363636363637, + "TN": 18760, + "TP": 391, + "n_pred": 421, + "n_ref": 410 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6787239387088672, + "FN": 1147, + "FP": 132, + "IoU": 0.5136882129277567, + "TN": 10170, + "TP": 1351, + "n_pred": 1483, + "n_ref": 2498 + }, + "2": { + "Dice": 0.9100604337006755, + "FN": 138, + "FP": 115, + "IoU": 0.8349641226353555, + "TN": 11267, + "TP": 1280, + "n_pred": 1395, + "n_ref": 1418 + }, + "3": { + "Dice": 0.9671513193322563, + "FN": 40, + "FP": 21, + "IoU": 0.9363920750782064, + "TN": 11841, + "TP": 898, + "n_pred": 919, + "n_ref": 938 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7987723785166241, + "FN": 1910, + "FP": 57, + "IoU": 0.6649633793220916, + "TN": 6929, + "TP": 3904, + "n_pred": 3961, + "n_ref": 5814 + }, + "2": { + "Dice": 0.9264029438822448, + "FN": 53, + "FP": 107, + "IoU": 0.8628963153384748, + "TN": 11633, + "TP": 1007, + "n_pred": 1114, + "n_ref": 1060 + }, + "3": { + "Dice": 0.959902794653706, + "FN": 52, + "FP": 14, + "IoU": 0.9228971962616822, + "TN": 11944, + "TP": 790, + "n_pred": 804, + "n_ref": 842 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7107572310692233, + "FN": 1747, + "FP": 33, + "IoU": 0.551298210234434, + "TN": 8833, + "TP": 2187, + "n_pred": 2220, + "n_ref": 3934 + }, + "2": { + "Dice": 0.8592092574734812, + "FN": 85, + "FP": 207, + "IoU": 0.7531699070160609, + "TN": 11617, + "TP": 891, + "n_pred": 1098, + "n_ref": 976 + }, + "3": { + "Dice": 0.9461678832116789, + "FN": 96, + "FP": 22, + "IoU": 0.8978354978354979, + "TN": 11645, + "TP": 1037, + "n_pred": 1059, + "n_ref": 1133 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6214748642494308, + "FN": 1776, + "FP": 385, + "IoU": 0.4508259212198221, + "TN": 15265, + "TP": 1774, + "n_pred": 2159, + "n_ref": 3550 + }, + "2": { + "Dice": 0.8956426217502746, + "FN": 237, + "FP": 618, + "IoU": 0.8110079575596817, + "TN": 14676, + "TP": 3669, + "n_pred": 4287, + "n_ref": 3906 + }, + "3": { + "Dice": 0.9718319064113456, + "FN": 349, + "FP": 82, + "IoU": 0.945207220950928, + "TN": 11334, + "TP": 7435, + "n_pred": 7517, + "n_ref": 7784 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6956521739130435, + "FN": 8, + "FP": 6, + "IoU": 0.5333333333333333, + "TN": 6370, + "TP": 16, + "n_pred": 22, + "n_ref": 24 + }, + "2": { + "Dice": 0.9321984150278838, + "FN": 100, + "FP": 131, + "IoU": 0.8730071467839472, + "TN": 4581, + "TP": 1588, + "n_pred": 1719, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9799086757990868, + "FN": 116, + "FP": 60, + "IoU": 0.9606087735004476, + "TN": 1932, + "TP": 4292, + "n_pred": 4352, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 32, + "IoU": 0.0, + "TN": 6368, + "TP": 0, + "n_pred": 32, + "n_ref": 0 + }, + "2": { + "Dice": 0.7585365853658537, + "FN": 99, + "FP": 99, + "IoU": 0.6110019646365422, + "TN": 5891, + "TP": 311, + "n_pred": 410, + "n_ref": 410 + }, + "3": { + "Dice": 0.7126805778491172, + "FN": 14, + "FP": 523, + "IoU": 0.5536159600997507, + "TN": 5197, + "TP": 666, + "n_pred": 1189, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6965944272445821, + "FN": 136, + "FP": 256, + "IoU": 0.5344418052256532, + "TN": 18358, + "TP": 450, + "n_pred": 706, + "n_ref": 586 + }, + "2": { + "Dice": 0.8909312069198541, + "FN": 478, + "FP": 329, + "IoU": 0.8033146478186692, + "TN": 15097, + "TP": 3296, + "n_pred": 3625, + "n_ref": 3774 + }, + "3": { + "Dice": 0.9505030181086519, + "FN": 162, + "FP": 84, + "IoU": 0.9056748466257669, + "TN": 16592, + "TP": 2362, + "n_pred": 2446, + "n_ref": 2524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.886223191566703, + "FN": 256, + "FP": 57, + "IoU": 0.7956919060052219, + "TN": 11268, + "TP": 1219, + "n_pred": 1276, + "n_ref": 1475 + }, + "2": { + "Dice": 0.9158730158730158, + "FN": 97, + "FP": 9, + "IoU": 0.8448023426061494, + "TN": 12117, + "TP": 577, + "n_pred": 586, + "n_ref": 674 + }, + "3": { + "Dice": 0.9829763866007688, + "FN": 6, + "FP": 25, + "IoU": 0.9665226781857451, + "TN": 11874, + "TP": 895, + "n_pred": 920, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8686042656647144, + "FN": 982, + "FP": 207, + "IoU": 0.7677280718890408, + "TN": 7681, + "TP": 3930, + "n_pred": 4137, + "n_ref": 4912 + }, + "2": { + "Dice": 0.7485220554797636, + "FN": 199, + "FP": 354, + "IoU": 0.5981104651162791, + "TN": 11424, + "TP": 823, + "n_pred": 1177, + "n_ref": 1022 + }, + "3": { + "Dice": 0.8574012662044016, + "FN": 82, + "FP": 391, + "IoU": 0.7503957783641161, + "TN": 10905, + "TP": 1422, + "n_pred": 1813, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8189544166881277, + "FN": 646, + "FP": 57, + "IoU": 0.6934147405146097, + "TN": 10507, + "TP": 1590, + "n_pred": 1647, + "n_ref": 2236 + }, + "2": { + "Dice": 0.7157057654075547, + "FN": 192, + "FP": 237, + "IoU": 0.5572755417956656, + "TN": 11831, + "TP": 540, + "n_pred": 777, + "n_ref": 732 + }, + "3": { + "Dice": 0.7958477508650519, + "FN": 236, + "FP": 0, + "IoU": 0.6609195402298851, + "TN": 12104, + "TP": 460, + "n_pred": 460, + "n_ref": 696 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8345807239957233, + "FN": 1032, + "FP": 51, + "IoU": 0.7161205766710353, + "TN": 8985, + "TP": 2732, + "n_pred": 2783, + "n_ref": 3764 + }, + "2": { + "Dice": 0.8609467455621301, + "FN": 132, + "FP": 56, + "IoU": 0.7558441558441559, + "TN": 12030, + "TP": 582, + "n_pred": 638, + "n_ref": 714 + }, + "3": { + "Dice": 0.8148148148148148, + "FN": 41, + "FP": 4, + "IoU": 0.6875, + "TN": 12656, + "TP": 99, + "n_pred": 103, + "n_ref": 140 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8081659105638367, + "FN": 489, + "FP": 103, + "IoU": 0.6780859162588363, + "TN": 10961, + "TP": 1247, + "n_pred": 1350, + "n_ref": 1736 + }, + "2": { + "Dice": 0.7079207920792079, + "FN": 191, + "FP": 163, + "IoU": 0.5478927203065134, + "TN": 12017, + "TP": 429, + "n_pred": 592, + "n_ref": 620 + }, + "3": { + "Dice": 0.9202898550724637, + "FN": 101, + "FP": 9, + "IoU": 0.8523489932885906, + "TN": 12055, + "TP": 635, + "n_pred": 644, + "n_ref": 736 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2907982/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8437046109793981, + "FN": 250.3133903133903, + "FP": 215.53418803418805, + "IoU": 0.7581670498013138, + "TN": 11124.71918328585, + "TP": 1588.6924976258306, + "n_pred": 1804.2266856600193, + "n_ref": 1839.0058879392213 + }, + "mean": { + "1": { + "Dice": 0.7691548740790239, + "FN": 369.71452991452986, + "FP": 273.72991452991454, + "IoU": 0.6734825820278363, + "TN": 10741.584045584046, + "TP": 1794.230769230769, + "n_pred": 2067.9606837606834, + "n_ref": 2163.945299145299 + }, + "2": { + "Dice": 0.856512700832935, + "FN": 216.3783475783476, + "FP": 219.07863247863247, + "IoU": 0.7602768531881373, + "TN": 11380.212535612536, + "TP": 1363.5897435897434, + "n_pred": 1582.6683760683761, + "n_ref": 1579.968091168091 + }, + "3": { + "Dice": 0.9054462580262351, + "FN": 164.84729344729345, + "FP": 153.79401709401708, + "IoU": 0.8407417141879678, + "TN": 11252.360968660967, + "TP": 1608.25698005698, + "n_pred": 1762.050997150997, + "n_ref": 1773.1042735042734 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_005/summary.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_005/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..34aab2a81fbea4a4159cb5fa9aaa841287772f5a --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_005/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8988653224823681, + "FN": 882.5, + "FP": 859.2333333333332, + "IoU": 0.822310095518244, + "TN": 843375.2933333333, + "TP": 9311.613333333333, + "n_pred": 10170.846666666666, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8834990515263585, + "FN": 1033.32, + "FP": 872.78, + "IoU": 0.7975821815001344, + "TN": 843701.8, + "TP": 8820.74, + "n_pred": 9693.52, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8732577409985816, + "FN": 1182.22, + "FP": 1152.66, + "IoU": 0.7787584974674395, + "TN": 843220.48, + "TP": 8873.28, + "n_pred": 10025.94, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9398391749221637, + "FN": 431.96, + "FP": 552.26, + "IoU": 0.8905896075871581, + "TN": 843203.6, + "TP": 10240.82, + "n_pred": 10793.08, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9339314489787031, + "FN": 724, + "FP": 793, + "IoU": 0.8760519650298227, + "TN": 1093681, + "TP": 10722, + "n_pred": 11515, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8582151793160967, + "FN": 1108, + "FP": 2972, + "IoU": 0.7516435354273192, + "TN": 1089492, + "TP": 12348, + "n_pred": 15320, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9444644933638077, + "FN": 654, + "FP": 2116, + "IoU": 0.8947728308767664, + "TN": 1079596, + "TP": 23554, + "n_pred": 25670, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8687199055146725, + "FN": 97, + "FP": 1348, + "IoU": 0.7679087696755541, + "TN": 1099694, + "TP": 4781, + "n_pred": 6129, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8822807514396299, + "FN": 1961, + "FP": 1780, + "IoU": 0.7893581081081081, + "TN": 1088160, + "TP": 14019, + "n_pred": 15799, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9323915763135947, + "FN": 595, + "FP": 1999, + "IoU": 0.8733460280259753, + "TN": 1085439, + "TP": 17887, + "n_pred": 19886, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8945472015373529, + "FN": 1422, + "FP": 334, + "IoU": 0.8092133854845719, + "TN": 900236, + "TP": 7448, + "n_pred": 7782, + "n_ref": 8870 + }, + "2": { + "Dice": 0.9030187693570656, + "FN": 1686, + "FP": 913, + "IoU": 0.8231852506973264, + "TN": 894741, + "TP": 12100, + "n_pred": 13013, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9761512203051343, + "FN": 394, + "FP": 633, + "IoU": 0.9534134724427308, + "TN": 887395, + "TP": 21018, + "n_pred": 21651, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7382839421088904, + "FN": 2693, + "FP": 345, + "IoU": 0.5851427010787928, + "TN": 902117, + "TP": 4285, + "n_pred": 4630, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8982078345257491, + "FN": 1644, + "FP": 1230, + "IoU": 0.8152243795808152, + "TN": 893886, + "TP": 12680, + "n_pred": 13910, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9725810349920778, + "FN": 526, + "FP": 495, + "IoU": 0.9466255423702232, + "TN": 890311, + "TP": 18108, + "n_pred": 18603, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9583685902860044, + "FN": 1526, + "FP": 442, + "IoU": 0.9200649878147847, + "TN": 1401140, + "TP": 22652, + "n_pred": 23094, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8984338862089474, + "FN": 1488, + "FP": 1586, + "IoU": 0.8155968806238753, + "TN": 1409090, + "TP": 13596, + "n_pred": 15182, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9766627312081858, + "FN": 459, + "FP": 727, + "IoU": 0.9543898780909895, + "TN": 1399757, + "TP": 24817, + "n_pred": 25544, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9497655726724715, + "FN": 534, + "FP": 1266, + "IoU": 0.9043367346938775, + "TN": 1406944, + "TP": 17016, + "n_pred": 18282, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8997949685943958, + "FN": 1244, + "FP": 1835, + "IoU": 0.8178429864521091, + "TN": 1408857, + "TP": 13824, + "n_pred": 15659, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9727951243209823, + "FN": 673, + "FP": 559, + "IoU": 0.9470312567178296, + "TN": 1402501, + "TP": 22027, + "n_pred": 22586, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9479681788862611, + "FN": 440, + "FP": 528, + "IoU": 0.9010831800531371, + "TN": 752262, + "TP": 8818, + "n_pred": 9346, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8733048387947866, + "FN": 1135, + "FP": 1266, + "IoU": 0.775103034844511, + "TN": 751372, + "TP": 8275, + "n_pred": 9541, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9710739916637939, + "FN": 523, + "FP": 400, + "IoU": 0.9437743664717348, + "TN": 745632, + "TP": 15493, + "n_pred": 15893, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8148763764803657, + "FN": 996, + "FP": 786, + "IoU": 0.6875876577840112, + "TN": 756344, + "TP": 3922, + "n_pred": 4708, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8298203423397935, + "FN": 2439, + "FP": 1170, + "IoU": 0.7091392649903289, + "TN": 749640, + "TP": 8799, + "n_pred": 9969, + "n_ref": 11238 + }, + "3": { + "Dice": 0.950028517527311, + "FN": 1085, + "FP": 54, + "IoU": 0.9048136386428213, + "TN": 750082, + "TP": 10827, + "n_pred": 10881, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9604428639513143, + "FN": 745, + "FP": 334, + "IoU": 0.9238961771759063, + "TN": 1064094, + "TP": 13099, + "n_pred": 13433, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8946484036865421, + "FN": 1085, + "FP": 984, + "IoU": 0.8093790307720656, + "TN": 1067418, + "TP": 8785, + "n_pred": 9769, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9758976611397826, + "FN": 629, + "FP": 249, + "IoU": 0.9529298236208653, + "TN": 1059619, + "TP": 17775, + "n_pred": 18024, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9539720678780598, + "FN": 591, + "FP": 635, + "IoU": 0.9119948316703754, + "TN": 1064341, + "TP": 12705, + "n_pred": 13340, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8772813089993706, + "FN": 1739, + "FP": 796, + "IoU": 0.781390134529148, + "TN": 1066676, + "TP": 9061, + "n_pred": 9857, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9610321221695629, + "FN": 626, + "FP": 558, + "IoU": 0.9249873289406995, + "TN": 1062488, + "TP": 14600, + "n_pred": 15158, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9282048389825729, + "FN": 903, + "FP": 370, + "IoU": 0.8660282045885077, + "TN": 1096418, + "TP": 8229, + "n_pred": 8599, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8650976379295643, + "FN": 1337, + "FP": 1827, + "IoU": 0.7622661356976482, + "TN": 1092611, + "TP": 10145, + "n_pred": 11972, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9155207975249227, + "FN": 843, + "FP": 1123, + "IoU": 0.8442031856723987, + "TN": 1093301, + "TP": 10653, + "n_pred": 11776, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8594052437093085, + "FN": 610, + "FP": 189, + "IoU": 0.7534711508793582, + "TN": 1102679, + "TP": 2442, + "n_pred": 2631, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8777372262773723, + "FN": 808, + "FP": 2408, + "IoU": 0.7821138211382114, + "TN": 1091160, + "TP": 11544, + "n_pred": 13952, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7897215121754338, + "FN": 345, + "FP": 1218, + "IoU": 0.6525122276567363, + "TN": 1101422, + "TP": 2935, + "n_pred": 4153, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8347481256583431, + "FN": 2428, + "FP": 239, + "IoU": 0.7163671168775922, + "TN": 1137477, + "TP": 6736, + "n_pred": 6975, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9204101314654078, + "FN": 1283, + "FP": 1853, + "IoU": 0.8525553622643284, + "TN": 1125611, + "TP": 18133, + "n_pred": 19986, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9353181399025161, + "FN": 1280, + "FP": 193, + "IoU": 0.878495421925266, + "TN": 1134757, + "TP": 10650, + "n_pred": 10843, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7179251778746845, + "FN": 902, + "FP": 327, + "IoU": 0.5599713569638382, + "TN": 1144087, + "TP": 1564, + "n_pred": 1891, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8618996087571797, + "FN": 3728, + "FP": 2908, + "IoU": 0.7573142188414277, + "TN": 1119536, + "TP": 20708, + "n_pred": 23616, + "n_ref": 24436 + }, + "3": { + "Dice": 0.6530916314874596, + "FN": 86, + "FP": 2708, + "IoU": 0.48488200589970504, + "TN": 1141456, + "TP": 2630, + "n_pred": 5338, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9555309922625627, + "FN": 608, + "FP": 438, + "IoU": 0.9148485835232824, + "TN": 788516, + "TP": 11238, + "n_pred": 11676, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8864952513319435, + "FN": 980, + "FP": 980, + "IoU": 0.796130642812565, + "TN": 791186, + "TP": 7654, + "n_pred": 8634, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9618230940913897, + "FN": 465, + "FP": 185, + "IoU": 0.9264539488572076, + "TN": 791962, + "TP": 8188, + "n_pred": 8373, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8388834476003918, + "FN": 513, + "FP": 803, + "IoU": 0.7224799662589625, + "TN": 796058, + "TP": 3426, + "n_pred": 4229, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9109329861252391, + "FN": 1458, + "FP": 731, + "IoU": 0.8364342822984383, + "TN": 787417, + "TP": 11194, + "n_pred": 11925, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8877164056059357, + "FN": 154, + "FP": 527, + "IoU": 0.7981025793062556, + "TN": 797427, + "TP": 2692, + "n_pred": 3219, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9479170238299331, + "FN": 369, + "FP": 1150, + "IoU": 0.9009907443618824, + "TN": 1332498, + "TP": 13823, + "n_pred": 14973, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8895056211486899, + "FN": 1151, + "FP": 1198, + "IoU": 0.8009996611318198, + "TN": 1336036, + "TP": 9455, + "n_pred": 10653, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9740150880134115, + "FN": 479, + "FP": 420, + "IoU": 0.9493464052287581, + "TN": 1330092, + "TP": 16849, + "n_pred": 17269, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7742816190021159, + "FN": 196, + "FP": 3111, + "IoU": 0.6316961799754984, + "TN": 1338861, + "TP": 5672, + "n_pred": 8783, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8818140738610689, + "FN": 1381, + "FP": 1496, + "IoU": 0.7886113152094049, + "TN": 1334230, + "TP": 10733, + "n_pred": 12229, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9581732636940475, + "FN": 519, + "FP": 450, + "IoU": 0.9197050049718263, + "TN": 1335772, + "TP": 11099, + "n_pred": 11549, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8433416532080458, + "FN": 974, + "FP": 3294, + "IoU": 0.7291190657527291, + "TN": 836212, + "TP": 11488, + "n_pred": 14782, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8694519691602417, + "FN": 1103, + "FP": 1403, + "IoU": 0.7690535434522164, + "TN": 841117, + "TP": 8345, + "n_pred": 9748, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9750532234292265, + "FN": 626, + "FP": 288, + "IoU": 0.9513208351086493, + "TN": 833192, + "TP": 17862, + "n_pred": 18150, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8973077783578194, + "FN": 922, + "FP": 455, + "IoU": 0.8137427296090897, + "TN": 844575, + "TP": 6016, + "n_pred": 6471, + "n_ref": 6938 + }, + "2": { + "Dice": 0.884364747651791, + "FN": 1453, + "FP": 1120, + "IoU": 0.7927006123106671, + "TN": 839556, + "TP": 9839, + "n_pred": 10959, + "n_ref": 11292 + }, + "3": { + "Dice": 0.963670979523643, + "FN": 595, + "FP": 340, + "IoU": 0.9298890221955609, + "TN": 838632, + "TP": 12401, + "n_pred": 12741, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8121594493834241, + "FN": 1608, + "FP": 357, + "IoU": 0.6837276677933366, + "TN": 845755, + "TP": 4248, + "n_pred": 4605, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8815314898733007, + "FN": 1188, + "FP": 1374, + "IoU": 0.7881594178931701, + "TN": 839874, + "TP": 9532, + "n_pred": 10906, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9507593924860112, + "FN": 1062, + "FP": 170, + "IoU": 0.9061404845345117, + "TN": 838842, + "TP": 11894, + "n_pred": 12064, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8889407372841811, + "FN": 199, + "FP": 277, + "IoU": 0.8000839983200336, + "TN": 849587, + "TP": 1905, + "n_pred": 2182, + "n_ref": 2104 + }, + "2": { + "Dice": 0.9047138997540224, + "FN": 1368, + "FP": 995, + "IoU": 0.8260069214343568, + "TN": 838387, + "TP": 11218, + "n_pred": 12213, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9482144907566885, + "FN": 488, + "FP": 414, + "IoU": 0.901528384279476, + "TN": 842808, + "TP": 8258, + "n_pred": 8672, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9241915246691221, + "FN": 1671, + "FP": 202, + "IoU": 0.8590669676448458, + "TN": 783750, + "TP": 11417, + "n_pred": 11619, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8562119895742832, + "FN": 970, + "FP": 1678, + "IoU": 0.7485757690846943, + "TN": 786508, + "TP": 7884, + "n_pred": 9562, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9575652697313972, + "FN": 731, + "FP": 397, + "IoU": 0.9185853482497294, + "TN": 783185, + "TP": 12727, + "n_pred": 13124, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9097295398665262, + "FN": 1193, + "FP": 92, + "IoU": 0.8344072164948454, + "TN": 789280, + "TP": 6475, + "n_pred": 6567, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8842338486328617, + "FN": 842, + "FP": 1457, + "IoU": 0.7924902969582093, + "TN": 785961, + "TP": 8780, + "n_pred": 10237, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9464355387102168, + "FN": 542, + "FP": 419, + "IoU": 0.8983176383451487, + "TN": 787589, + "TP": 8490, + "n_pred": 8909, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9209089449172957, + "FN": 999, + "FP": 971, + "IoU": 0.8534117121809659, + "TN": 883231, + "TP": 11469, + "n_pred": 12440, + "n_ref": 12468 + }, + "2": { + "Dice": 0.877831094049904, + "FN": 1191, + "FP": 1355, + "IoU": 0.7822628923287437, + "TN": 884977, + "TP": 9147, + "n_pred": 10502, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9502310124017184, + "FN": 529, + "FP": 699, + "IoU": 0.9051810670990658, + "TN": 883719, + "TP": 11723, + "n_pred": 12422, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7905720599067027, + "FN": 1526, + "FP": 1033, + "IoU": 0.6536743808363784, + "TN": 889281, + "TP": 4830, + "n_pred": 5863, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8994226678821027, + "FN": 1158, + "FP": 1159, + "IoU": 0.8172280508006626, + "TN": 883993, + "TP": 10360, + "n_pred": 11519, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9441015286991635, + "FN": 643, + "FP": 326, + "IoU": 0.8941215034965035, + "TN": 887518, + "TP": 8183, + "n_pred": 8509, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9584485064645564, + "FN": 471, + "FP": 461, + "IoU": 0.9202123105898468, + "TN": 750367, + "TP": 10749, + "n_pred": 11210, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9333528350641119, + "FN": 840, + "FP": 527, + "IoU": 0.8750342810128897, + "TN": 751109, + "TP": 9572, + "n_pred": 10099, + "n_ref": 10412 + }, + "3": { + "Dice": 0.978150406504065, + "FN": 202, + "FP": 314, + "IoU": 0.9572352063649925, + "TN": 749982, + "TP": 11550, + "n_pred": 11864, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8938053097345132, + "FN": 257, + "FP": 583, + "IoU": 0.808, + "TN": 757673, + "TP": 3535, + "n_pred": 4118, + "n_ref": 3792 + }, + "2": { + "Dice": 0.9114637530350329, + "FN": 1121, + "FP": 921, + "IoU": 0.8373297219788098, + "TN": 749495, + "TP": 10511, + "n_pred": 11432, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9504009504009504, + "FN": 434, + "FP": 234, + "IoU": 0.9054895302773062, + "TN": 754980, + "TP": 6400, + "n_pred": 6634, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8398240182499592, + "FN": 211, + "FP": 2738, + "IoU": 0.7238764044943821, + "TN": 984648, + "TP": 7731, + "n_pred": 10469, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8581217031921258, + "FN": 858, + "FP": 1751, + "IoU": 0.7515001428707496, + "TN": 984829, + "TP": 7890, + "n_pred": 9641, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9730209968312258, + "FN": 118, + "FP": 793, + "IoU": 0.947459484399331, + "TN": 977989, + "TP": 16428, + "n_pred": 17221, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7348323074990579, + "FN": 317, + "FP": 1794, + "IoU": 0.5808181096108023, + "TN": 990292, + "TP": 2925, + "n_pred": 4719, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8456124917528041, + "FN": 644, + "FP": 2164, + "IoU": 0.732520480091446, + "TN": 984830, + "TP": 7690, + "n_pred": 9854, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9260810155595716, + "FN": 109, + "FP": 1568, + "IoU": 0.8623378755540962, + "TN": 983146, + "TP": 10505, + "n_pred": 12073, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9438520205680367, + "FN": 649, + "FP": 978, + "IoU": 0.8936740295386224, + "TN": 742714, + "TP": 13675, + "n_pred": 14653, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9004929496732775, + "FN": 957, + "FP": 779, + "IoU": 0.8189969763319779, + "TN": 748425, + "TP": 7855, + "n_pred": 8634, + "n_ref": 8812 + }, + "3": { + "Dice": 0.977268737932245, + "FN": 167, + "FP": 351, + "IoU": 0.955547927572299, + "TN": 746363, + "TP": 11135, + "n_pred": 11486, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7788865546218487, + "FN": 787, + "FP": 1739, + "IoU": 0.6378494623655914, + "TN": 751041, + "TP": 4449, + "n_pred": 6188, + "n_ref": 5236 + }, + "2": { + "Dice": 0.913303358899762, + "FN": 699, + "FP": 940, + "IoU": 0.840440031152648, + "TN": 747744, + "TP": 8633, + "n_pred": 9573, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9296628668445307, + "FN": 359, + "FP": 221, + "IoU": 0.8685701336958985, + "TN": 753603, + "TP": 3833, + "n_pred": 4054, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9621752419765665, + "FN": 391, + "FP": 203, + "IoU": 0.9271076205669407, + "TN": 630827, + "TP": 7555, + "n_pred": 7758, + "n_ref": 7946 + }, + "2": { + "Dice": 0.9022128362868423, + "FN": 453, + "FP": 612, + "IoU": 0.8218467714954835, + "TN": 632998, + "TP": 4913, + "n_pred": 5525, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9645803008248424, + "FN": 376, + "FP": 135, + "IoU": 0.9315838800374883, + "TN": 631507, + "TP": 6958, + "n_pred": 7093, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9140937450007999, + "FN": 163, + "FP": 374, + "IoU": 0.8417796110783736, + "TN": 635582, + "TP": 2857, + "n_pred": 3231, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9393367484497169, + "FN": 384, + "FP": 516, + "IoU": 0.8856126080325368, + "TN": 631108, + "TP": 6968, + "n_pred": 7484, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9290767277344458, + "FN": 195, + "FP": 196, + "IoU": 0.8675474254742548, + "TN": 636024, + "TP": 2561, + "n_pred": 2757, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9495063657215038, + "FN": 1158, + "FP": 361, + "IoU": 0.9038668438706411, + "TN": 967239, + "TP": 14282, + "n_pred": 14643, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8905204275297173, + "FN": 981, + "FP": 1211, + "IoU": 0.8026469793823715, + "TN": 971933, + "TP": 8915, + "n_pred": 10126, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9695758383300023, + "FN": 120, + "FP": 702, + "IoU": 0.940948275862069, + "TN": 969120, + "TP": 13098, + "n_pred": 13800, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.939384116693679, + "FN": 392, + "FP": 356, + "IoU": 0.8856968215158925, + "TN": 976496, + "TP": 5796, + "n_pred": 6152, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9265827901571422, + "FN": 787, + "FP": 666, + "IoU": 0.8632084353229147, + "TN": 972418, + "TP": 9169, + "n_pred": 9835, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9518594196975889, + "FN": 167, + "FP": 422, + "IoU": 0.9081409856519027, + "TN": 976628, + "TP": 5823, + "n_pred": 6245, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9601344127081106, + "FN": 465, + "FP": 840, + "IoU": 0.9233254994124559, + "TN": 1031556, + "TP": 15715, + "n_pred": 16555, + "n_ref": 16180 + }, + "2": { + "Dice": 0.9116539207852985, + "FN": 721, + "FP": 827, + "IoU": 0.837650760356581, + "TN": 1039041, + "TP": 7987, + "n_pred": 8814, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9707748898500344, + "FN": 252, + "FP": 471, + "IoU": 0.9432094886497526, + "TN": 1035845, + "TP": 12008, + "n_pred": 12479, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.916421207658321, + "FN": 452, + "FP": 456, + "IoU": 0.8457356439007815, + "TN": 1042690, + "TP": 4978, + "n_pred": 5434, + "n_ref": 5430 + }, + "2": { + "Dice": 0.906491902930142, + "FN": 778, + "FP": 1191, + "IoU": 0.8289759402414661, + "TN": 1037063, + "TP": 9544, + "n_pred": 10735, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9529935675408214, + "FN": 265, + "FP": 210, + "IoU": 0.9102079395085066, + "TN": 1043286, + "TP": 4815, + "n_pred": 5025, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8961256644796705, + "FN": 1806, + "FP": 363, + "IoU": 0.8118004338394794, + "TN": 477691, + "TP": 9356, + "n_pred": 9719, + "n_ref": 11162 + }, + "2": { + "Dice": 0.8161324410003522, + "FN": 400, + "FP": 644, + "IoU": 0.6893781612615293, + "TN": 485855, + "TP": 2317, + "n_pred": 2961, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9646384198789424, + "FN": 109, + "FP": 224, + "IoU": 0.9316923076923077, + "TN": 484341, + "TP": 4542, + "n_pred": 4766, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8753507014028056, + "FN": 1191, + "FP": 364, + "IoU": 0.7783321454027085, + "TN": 482201, + "TP": 5460, + "n_pred": 5824, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8619326269176024, + "FN": 635, + "FP": 238, + "IoU": 0.7573652028904947, + "TN": 485618, + "TP": 2725, + "n_pred": 2963, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8884276076803321, + "FN": 78, + "FP": 352, + "IoU": 0.7992530345471522, + "TN": 487074, + "TP": 1712, + "n_pred": 2064, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9210967395085544, + "FN": 1313, + "FP": 1182, + "IoU": 0.8537343182084652, + "TN": 463422, + "TP": 14563, + "n_pred": 15745, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8283846071390288, + "FN": 655, + "FP": 946, + "IoU": 0.7070448307410796, + "TN": 475015, + "TP": 3864, + "n_pred": 4810, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9546993158084264, + "FN": 332, + "FP": 297, + "IoU": 0.9133250654540443, + "TN": 473223, + "TP": 6628, + "n_pred": 6925, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.918496267173212, + "FN": 1215, + "FP": 630, + "IoU": 0.8492770198513193, + "TN": 468239, + "TP": 10396, + "n_pred": 11026, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8589695374200828, + "FN": 1094, + "FP": 406, + "IoU": 0.7528015820698748, + "TN": 474412, + "TP": 4568, + "n_pred": 4974, + "n_ref": 5662 + }, + "3": { + "Dice": 0.9020516214427532, + "FN": 80, + "FP": 512, + "IoU": 0.8215792646172393, + "TN": 477162, + "TP": 2726, + "n_pred": 3238, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8939478067740144, + "FN": 3767, + "FP": 244, + "IoU": 0.8082329317269076, + "TN": 623724, + "TP": 16905, + "n_pred": 17149, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8272933182332955, + "FN": 1761, + "FP": 1289, + "IoU": 0.7054563013037181, + "TN": 634285, + "TP": 7305, + "n_pred": 8594, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9617820324005891, + "FN": 937, + "FP": 101, + "IoU": 0.926377757287751, + "TN": 630541, + "TP": 13061, + "n_pred": 13162, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8296566347978126, + "FN": 4181, + "FP": 398, + "IoU": 0.7089001907183725, + "TN": 628910, + "TP": 11151, + "n_pred": 11549, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8832424282736907, + "FN": 2207, + "FP": 426, + "IoU": 0.7908989834815756, + "TN": 632048, + "TP": 9959, + "n_pred": 10385, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9412839248434238, + "FN": 348, + "FP": 552, + "IoU": 0.8890806014296279, + "TN": 636526, + "TP": 7214, + "n_pred": 7766, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9332800263399261, + "FN": 2210, + "FP": 627, + "IoU": 0.8749063009832885, + "TN": 541801, + "TP": 19842, + "n_pred": 20469, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7980044088641374, + "FN": 1030, + "FP": 711, + "IoU": 0.6638996138996139, + "TN": 559300, + "TP": 3439, + "n_pred": 4150, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9523261022589109, + "FN": 456, + "FP": 289, + "IoU": 0.9089909601759101, + "TN": 556294, + "TP": 7441, + "n_pred": 7730, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7880479735318445, + "FN": 810, + "FP": 3290, + "IoU": 0.650230336120116, + "TN": 552758, + "TP": 7622, + "n_pred": 10912, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8658153652920243, + "FN": 727, + "FP": 555, + "IoU": 0.7633813215208564, + "TN": 559062, + "TP": 4136, + "n_pred": 4691, + "n_ref": 4863 + }, + "3": { + "Dice": 0.946443996544774, + "FN": 165, + "FP": 207, + "IoU": 0.8983328778354742, + "TN": 560821, + "TP": 3287, + "n_pred": 3494, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8848856061970816, + "FN": 207, + "FP": 1710, + "IoU": 0.7935379644588045, + "TN": 409595, + "TP": 7368, + "n_pred": 9078, + "n_ref": 7575 + }, + "2": { + "Dice": 0.6556791104050834, + "FN": 1205, + "FP": 529, + "IoU": 0.4877400295420975, + "TN": 415495, + "TP": 1651, + "n_pred": 2180, + "n_ref": 2856 + }, + "3": { + "Dice": 0.8902765388046388, + "FN": 207, + "FP": 777, + "IoU": 0.8022508038585209, + "TN": 413904, + "TP": 3992, + "n_pred": 4769, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7880886426592798, + "FN": 185, + "FP": 2263, + "IoU": 0.6502857142857142, + "TN": 411880, + "TP": 4552, + "n_pred": 6815, + "n_ref": 4737 + }, + "2": { + "Dice": 0.6400163165408933, + "FN": 1424, + "FP": 341, + "IoU": 0.47060587882423516, + "TN": 415546, + "TP": 1569, + "n_pred": 1910, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8640657084188912, + "FN": 279, + "FP": 383, + "IoU": 0.7606652205350687, + "TN": 416114, + "TP": 2104, + "n_pred": 2487, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9472686855435297, + "FN": 569, + "FP": 878, + "IoU": 0.8998199944613681, + "TN": 482066, + "TP": 12997, + "n_pred": 13875, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8996361230565664, + "FN": 873, + "FP": 644, + "IoU": 0.8175805675805676, + "TN": 488194, + "TP": 6799, + "n_pred": 7443, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9675686048743044, + "FN": 209, + "FP": 298, + "IoU": 0.9371747211895911, + "TN": 488440, + "TP": 7563, + "n_pred": 7861, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.842419716206124, + "FN": 3110, + "FP": 688, + "IoU": 0.727741935483871, + "TN": 482560, + "TP": 10152, + "n_pred": 10840, + "n_ref": 13262 + }, + "2": { + "Dice": 0.9219745222929936, + "FN": 949, + "FP": 325, + "IoU": 0.8552437223042836, + "TN": 487709, + "TP": 7527, + "n_pred": 7852, + "n_ref": 8476 + }, + "3": { + "Dice": 0.940459313864474, + "FN": 83, + "FP": 337, + "IoU": 0.8876103826598876, + "TN": 492773, + "TP": 3317, + "n_pred": 3654, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_005/summary_cross_val.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_005/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..b783150c0b738f9dec3adb0c3694dafbb4c5e320 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_005/summary_cross_val.json @@ -0,0 +1,5316 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8564658695855455, + "FN": 194.30952380952382, + "FP": 272.92857142857144, + "IoU": 0.7748524354886518, + "TN": 12502.52380952381, + "TP": 1887.3809523809523, + "n_pred": 2160.3095238095234, + "n_ref": 2081.6904761904757 + }, + "mean": { + "1": { + "Dice": 0.7609425728317657, + "FN": 223.32142857142858, + "FP": 471.0, + "IoU": 0.6643450749188662, + "TN": 11812.535714285714, + "TP": 2350.285714285714, + "n_pred": 2821.285714285714, + "n_ref": 2573.6071428571427 + }, + "2": { + "Dice": 0.8870959222579565, + "FN": 253.14285714285714, + "FP": 210.21428571428572, + "IoU": 0.800083343954056, + "TN": 12459.25, + "TP": 1934.5357142857142, + "n_pred": 2144.75, + "n_ref": 2187.6785714285716 + }, + "3": { + "Dice": 0.9213591136669144, + "FN": 106.46428571428571, + "FP": 137.57142857142858, + "IoU": 0.8601288875930331, + "TN": 13235.785714285714, + "TP": 1377.3214285714287, + "n_pred": 1514.892857142857, + "n_ref": 1483.7857142857142 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9094311377245509, + "FN": 63, + "FP": 179, + "IoU": 0.8339052848318462, + "TN": 4943, + "TP": 1215, + "n_pred": 1394, + "n_ref": 1278 + }, + "3": { + "Dice": 0.9791083351281499, + "FN": 69, + "FP": 28, + "IoU": 0.9590717299578059, + "TN": 4030, + "TP": 2273, + "n_pred": 2301, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6925052533271072, + "FN": 675, + "FP": 642, + "IoU": 0.5296428571428572, + "TN": 16400, + "TP": 1483, + "n_pred": 2125, + "n_ref": 2158 + }, + "2": { + "Dice": 0.9032755298651253, + "FN": 286, + "FP": 216, + "IoU": 0.8236120871398454, + "TN": 16354, + "TP": 2344, + "n_pred": 2560, + "n_ref": 2630 + }, + "3": { + "Dice": 0.9634941329856584, + "FN": 99, + "FP": 181, + "IoU": 0.929559748427673, + "TN": 15225, + "TP": 3695, + "n_pred": 3876, + "n_ref": 3794 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7060922063666301, + "FN": 3, + "FP": 2139, + "IoU": 0.5457051961823967, + "TN": 8085, + "TP": 2573, + "n_pred": 4712, + "n_ref": 2576 + }, + "2": { + "Dice": 0.8576881134133042, + "FN": 295, + "FP": 227, + "IoU": 0.750835322195704, + "TN": 10705, + "TP": 1573, + "n_pred": 1800, + "n_ref": 1868 + }, + "3": { + "Dice": 0.9337145827917858, + "FN": 194, + "FP": 61, + "IoU": 0.8756704046806436, + "TN": 10749, + "TP": 1796, + "n_pred": 1857, + "n_ref": 1990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.944078144078144, + "FN": 169, + "FP": 60, + "IoU": 0.8940795559666975, + "TN": 10638, + "TP": 1933, + "n_pred": 1993, + "n_ref": 2102 + }, + "2": { + "Dice": 0.9157509157509157, + "FN": 18, + "FP": 28, + "IoU": 0.8445945945945946, + "TN": 12504, + "TP": 250, + "n_pred": 278, + "n_ref": 268 + }, + "3": { + "Dice": 0.896551724137931, + "FN": 18, + "FP": 6, + "IoU": 0.8125, + "TN": 12672, + "TP": 104, + "n_pred": 110, + "n_ref": 122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9425599276345545, + "FN": 126, + "FP": 255, + "IoU": 0.8913601368691189, + "TN": 15693, + "TP": 3126, + "n_pred": 3381, + "n_ref": 3252 + }, + "2": { + "Dice": 0.7828947368421053, + "FN": 337, + "FP": 389, + "IoU": 0.6432432432432432, + "TN": 17165, + "TP": 1309, + "n_pred": 1698, + "n_ref": 1646 + }, + "3": { + "Dice": 0.9633222905821107, + "FN": 283, + "FP": 27, + "IoU": 0.929239899566309, + "TN": 14819, + "TP": 4071, + "n_pred": 4098, + "n_ref": 4354 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8114714029656184, + "FN": 904, + "FP": 253, + "IoU": 0.6827529476281875, + "TN": 2753, + "TP": 2490, + "n_pred": 2743, + "n_ref": 3394 + }, + "2": { + "Dice": 0.9048295454545454, + "FN": 83, + "FP": 51, + "IoU": 0.8261997405966277, + "TN": 5629, + "TP": 637, + "n_pred": 688, + "n_ref": 720 + }, + "3": { + "Dice": 0.9215189873417722, + "FN": 4, + "FP": 27, + "IoU": 0.8544600938967136, + "TN": 6187, + "TP": 182, + "n_pred": 209, + "n_ref": 186 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8483965014577259, + "FN": 205, + "FP": 107, + "IoU": 0.7367088607594937, + "TN": 24415, + "TP": 873, + "n_pred": 980, + "n_ref": 1078 + }, + "2": { + "Dice": 0.907127591766338, + "FN": 1819, + "FP": 658, + "IoU": 0.8300397968985865, + "TN": 11026, + "TP": 12097, + "n_pred": 12755, + "n_ref": 13916 + }, + "3": { + "Dice": 0.8183032732130928, + "FN": 104, + "FP": 984, + "IoU": 0.6924816280384398, + "TN": 22062, + "TP": 2450, + "n_pred": 3434, + "n_ref": 2554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9111926605504587, + "FN": 329, + "FP": 155, + "IoU": 0.8368722615436468, + "TN": 22633, + "TP": 2483, + "n_pred": 2638, + "n_ref": 2812 + }, + "2": { + "Dice": 0.8797800953997899, + "FN": 425, + "FP": 1062, + "IoU": 0.7853637413394919, + "TN": 18672, + "TP": 5441, + "n_pred": 6503, + "n_ref": 5866 + }, + "3": { + "Dice": 0.669260700389105, + "FN": 181, + "FP": 1264, + "IoU": 0.5029239766081871, + "TN": 22693, + "TP": 1462, + "n_pred": 2726, + "n_ref": 1643 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9133663366336634, + "FN": 92, + "FP": 48, + "IoU": 0.8405466970387244, + "TN": 31122, + "TP": 738, + "n_pred": 786, + "n_ref": 830 + }, + "2": { + "Dice": 0.915721966703375, + "FN": 1086, + "FP": 215, + "IoU": 0.8445453459194647, + "TN": 23631, + "TP": 7068, + "n_pred": 7283, + "n_ref": 8154 + }, + "3": { + "Dice": 0.8600508905852418, + "FN": 163, + "FP": 442, + "IoU": 0.7544642857142857, + "TN": 29536, + "TP": 1859, + "n_pred": 2301, + "n_ref": 2022 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1836734693877551, + "FN": 640, + "FP": 0, + "IoU": 0.10112359550561797, + "TN": 5688, + "TP": 72, + "n_pred": 72, + "n_ref": 712 + }, + "2": { + "Dice": 0.9328749773837525, + "FN": 314, + "FP": 57, + "IoU": 0.8741946422516107, + "TN": 3451, + "TP": 2578, + "n_pred": 2635, + "n_ref": 2892 + }, + "3": { + "Dice": 0.9569739952718677, + "FN": 22, + "FP": 160, + "IoU": 0.9174977334542158, + "TN": 4194, + "TP": 2024, + "n_pred": 2184, + "n_ref": 2046 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4860059269015476, + "FN": 36, + "FP": 1525, + "IoU": 0.3210091344062636, + "TN": 16901, + "TP": 738, + "n_pred": 2263, + "n_ref": 774 + }, + "2": { + "Dice": 0.8744756373023556, + "FN": 279, + "FP": 110, + "IoU": 0.7769495412844036, + "TN": 17456, + "TP": 1355, + "n_pred": 1465, + "n_ref": 1634 + }, + "3": { + "Dice": 0.9565029214455746, + "FN": 22, + "FP": 179, + "IoU": 0.916632102861883, + "TN": 16789, + "TP": 2210, + "n_pred": 2389, + "n_ref": 2232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7087144920558498, + "FN": 590, + "FP": 15, + "IoU": 0.5488441461595824, + "TN": 11459, + "TP": 736, + "n_pred": 751, + "n_ref": 1326 + }, + "2": { + "Dice": 0.8563179347826086, + "FN": 361, + "FP": 485, + "IoU": 0.7487377487377488, + "TN": 9433, + "TP": 2521, + "n_pred": 3006, + "n_ref": 2882 + }, + "3": { + "Dice": 0.9087546239210851, + "FN": 550, + "FP": 42, + "IoU": 0.8327683615819209, + "TN": 9260, + "TP": 2948, + "n_pred": 2990, + "n_ref": 3498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 280, + "IoU": 0.0, + "TN": 12520, + "TP": 0, + "n_pred": 280, + "n_ref": 0 + }, + "2": { + "Dice": 0.9177777777777778, + "FN": 43, + "FP": 31, + "IoU": 0.8480492813141683, + "TN": 12313, + "TP": 413, + "n_pred": 444, + "n_ref": 456 + }, + "3": { + "Dice": 0.9556840077071291, + "FN": 10, + "FP": 13, + "IoU": 0.915129151291513, + "TN": 12529, + "TP": 248, + "n_pred": 261, + "n_ref": 258 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4927835051546392, + "FN": 487, + "FP": 5, + "IoU": 0.32694938440492477, + "TN": 5669, + "TP": 239, + "n_pred": 244, + "n_ref": 726 + }, + "2": { + "Dice": 0.8328896776101745, + "FN": 112, + "FP": 453, + "IoU": 0.7136340598073999, + "TN": 4427, + "TP": 1408, + "n_pred": 1861, + "n_ref": 1520 + }, + "3": { + "Dice": 0.9244338498212157, + "FN": 303, + "FP": 14, + "IoU": 0.8594858156028369, + "TN": 4144, + "TP": 1939, + "n_pred": 1953, + "n_ref": 2242 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9689310163243813, + "FN": 178, + "FP": 58, + "IoU": 0.9397344228804902, + "TN": 8884, + "TP": 3680, + "n_pred": 3738, + "n_ref": 3858 + }, + "2": { + "Dice": 0.9475032010243278, + "FN": 18, + "FP": 64, + "IoU": 0.9002433090024331, + "TN": 11978, + "TP": 740, + "n_pred": 804, + "n_ref": 758 + }, + "3": { + "Dice": 0.9799147900182593, + "FN": 25, + "FP": 8, + "IoU": 0.9606205250596659, + "TN": 11962, + "TP": 805, + "n_pred": 813, + "n_ref": 830 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7806013579049467, + "FN": 194, + "FP": 2068, + "IoU": 0.6401527203308941, + "TN": 6514, + "TP": 4024, + "n_pred": 6092, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8707052441229657, + "FN": 116, + "FP": 170, + "IoU": 0.7710168134507606, + "TN": 11551, + "TP": 963, + "n_pred": 1133, + "n_ref": 1079 + }, + "3": { + "Dice": 0.926859250153657, + "FN": 97, + "FP": 22, + "IoU": 0.86368843069874, + "TN": 11927, + "TP": 754, + "n_pred": 776, + "n_ref": 851 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.952146375791696, + "FN": 52, + "FP": 84, + "IoU": 0.9086635325721961, + "TN": 11311, + "TP": 1353, + "n_pred": 1437, + "n_ref": 1405 + }, + "2": { + "Dice": 0.8997695852534562, + "FN": 81, + "FP": 93, + "IoU": 0.8178010471204189, + "TN": 11845, + "TP": 781, + "n_pred": 874, + "n_ref": 862 + }, + "3": { + "Dice": 0.9486899563318777, + "FN": 55, + "FP": 39, + "IoU": 0.9023883696780893, + "TN": 11837, + "TP": 869, + "n_pred": 908, + "n_ref": 924 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.833904109589041, + "FN": 25, + "FP": 945, + "IoU": 0.7151248164464024, + "TN": 2995, + "TP": 2435, + "n_pred": 3380, + "n_ref": 2460 + }, + "2": { + "Dice": 0.9575584167858846, + "FN": 33, + "FP": 56, + "IoU": 0.918572735590119, + "TN": 5307, + "TP": 1004, + "n_pred": 1060, + "n_ref": 1037 + }, + "3": { + "Dice": 0.9760827407886231, + "FN": 32, + "FP": 5, + "IoU": 0.9532828282828283, + "TN": 5608, + "TP": 755, + "n_pred": 760, + "n_ref": 787 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient075_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6684636118598383, + "FN": 214, + "FP": 155, + "IoU": 0.5020242914979757, + "TN": 18459, + "TP": 372, + "n_pred": 527, + "n_ref": 586 + }, + "2": { + "Dice": 0.8984927304255035, + "FN": 406, + "FP": 355, + "IoU": 0.8156938726083798, + "TN": 15071, + "TP": 3368, + "n_pred": 3723, + "n_ref": 3774 + }, + "3": { + "Dice": 0.9544546544147023, + "FN": 135, + "FP": 93, + "IoU": 0.9128773404661826, + "TN": 16583, + "TP": 2389, + "n_pred": 2482, + "n_ref": 2524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.921038961038961, + "FN": 266, + "FP": 38, + "IoU": 0.8536350505536832, + "TN": 10723, + "TP": 1773, + "n_pred": 1811, + "n_ref": 2039 + }, + "2": { + "Dice": 0.8739386022207707, + "FN": 123, + "FP": 70, + "IoU": 0.7761020881670534, + "TN": 11938, + "TP": 669, + "n_pred": 739, + "n_ref": 792 + }, + "3": { + "Dice": 0.8624203821656051, + "FN": 202, + "FP": 14, + "IoU": 0.7581187010078387, + "TN": 11907, + "TP": 677, + "n_pred": 691, + "n_ref": 879 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9612645003731091, + "FN": 307, + "FP": 264, + "IoU": 0.925417972831766, + "TN": 11544, + "TP": 7085, + "n_pred": 7349, + "n_ref": 7392 + }, + "2": { + "Dice": 0.8537087912087912, + "FN": 201, + "FP": 225, + "IoU": 0.7447573397243858, + "TN": 17531, + "TP": 1243, + "n_pred": 1468, + "n_ref": 1444 + }, + "3": { + "Dice": 0.8612754766600921, + "FN": 201, + "FP": 10, + "IoU": 0.75635103926097, + "TN": 18334, + "TP": 655, + "n_pred": 665, + "n_ref": 856 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9839405974788464, + "FN": 239, + "FP": 226, + "IoU": 0.9683888511216859, + "TN": 10890, + "TP": 14245, + "n_pred": 14471, + "n_ref": 14484 + }, + "2": { + "Dice": 0.9203102961918195, + "FN": 79, + "FP": 147, + "IoU": 0.8523840627041149, + "TN": 24069, + "TP": 1305, + "n_pred": 1452, + "n_ref": 1384 + }, + "3": { + "Dice": 0.9459757442116868, + "FN": 11, + "FP": 38, + "IoU": 0.897489539748954, + "TN": 25122, + "TP": 429, + "n_pred": 467, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7834696513129574, + "FN": 94, + "FP": 1918, + "IoU": 0.6440198159943383, + "TN": 7148, + "TP": 3640, + "n_pred": 5558, + "n_ref": 3734 + }, + "2": { + "Dice": 0.9100459619172685, + "FN": 33, + "FP": 104, + "IoU": 0.8349397590361446, + "TN": 11970, + "TP": 693, + "n_pred": 797, + "n_ref": 726 + }, + "3": { + "Dice": 0.9482758620689655, + "FN": 46, + "FP": 2, + "IoU": 0.9016393442622951, + "TN": 12312, + "TP": 440, + "n_pred": 442, + "n_ref": 486 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9016161043379642, + "FN": 146, + "FP": 201, + "IoU": 0.8208569953536397, + "TN": 10863, + "TP": 1590, + "n_pred": 1791, + "n_ref": 1736 + }, + "2": { + "Dice": 0.749793559042114, + "FN": 166, + "FP": 137, + "IoU": 0.5997357992073976, + "TN": 12043, + "TP": 454, + "n_pred": 591, + "n_ref": 620 + }, + "3": { + "Dice": 0.9208211143695014, + "FN": 108, + "FP": 0, + "IoU": 0.8532608695652174, + "TN": 12064, + "TP": 628, + "n_pred": 628, + "n_ref": 736 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6526835286859963, + "FN": 29, + "FP": 1660, + "IoU": 0.48443223443223443, + "TN": 15924, + "TP": 1587, + "n_pred": 3247, + "n_ref": 1616 + }, + "2": { + "Dice": 0.9330505907300818, + "FN": 98, + "FP": 123, + "IoU": 0.8745031232254401, + "TN": 17439, + "TP": 1540, + "n_pred": 1663, + "n_ref": 1638 + }, + "3": { + "Dice": 0.9696270665128797, + "FN": 14, + "FP": 65, + "IoU": 0.941044776119403, + "TN": 17860, + "TP": 1261, + "n_pred": 1326, + "n_ref": 1275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9746646795827124, + "FN": 253, + "FP": 87, + "IoU": 0.9505813953488372, + "TN": 5920, + "TP": 6540, + "n_pred": 6627, + "n_ref": 6793 + }, + "2": { + "Dice": 0.8587813620071685, + "FN": 213, + "FP": 181, + "IoU": 0.7525125628140703, + "TN": 11208, + "TP": 1198, + "n_pred": 1379, + "n_ref": 1411 + }, + "3": { + "Dice": 0.9532656023222061, + "FN": 33, + "FP": 128, + "IoU": 0.9107043815862451, + "TN": 10997, + "TP": 1642, + "n_pred": 1770, + "n_ref": 1675 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8825084880832241, + "FN": 188.82142857142856, + "FP": 175.05952380952382, + "IoU": 0.8133426132105549, + "TN": 11318.095238095237, + "TP": 2032.3095238095239, + "n_pred": 2207.3690476190477, + "n_ref": 2221.1309523809523 + }, + "mean": { + "1": { + "Dice": 0.8619968878901996, + "FN": 325.64285714285717, + "FP": 251.35714285714286, + "IoU": 0.7853490829815997, + "TN": 10539.714285714286, + "TP": 2597.5714285714284, + "n_pred": 2848.9285714285716, + "n_ref": 2923.214285714286 + }, + "2": { + "Dice": 0.8388585561835984, + "FN": 144.42857142857142, + "FP": 193.28571428571428, + "IoU": 0.7505237701315788, + "TN": 12168.857142857143, + "TP": 1207.7142857142858, + "n_pred": 1401.0, + "n_ref": 1352.142857142857 + }, + "3": { + "Dice": 0.9466700201758743, + "FN": 96.39285714285714, + "FP": 80.53571428571429, + "IoU": 0.9041549865184865, + "TN": 11245.714285714286, + "TP": 2291.6428571428573, + "n_pred": 2372.1785714285716, + "n_ref": 2388.035714285714 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6759259259259259, + "FN": 50, + "FP": 510, + "IoU": 0.5104895104895105, + "TN": 11656, + "TP": 584, + "n_pred": 1094, + "n_ref": 634 + }, + "2": { + "Dice": 0.8972582103043085, + "FN": 205, + "FP": 136, + "IoU": 0.8136612021857923, + "TN": 10970, + "TP": 1489, + "n_pred": 1625, + "n_ref": 1694 + }, + "3": { + "Dice": 0.9734672849046883, + "FN": 133, + "FP": 73, + "IoU": 0.9483061480552071, + "TN": 8815, + "TP": 3779, + "n_pred": 3852, + "n_ref": 3912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9620474406991261, + "FN": 263, + "FP": 41, + "IoU": 0.9268703391869136, + "TN": 8643, + "TP": 3853, + "n_pred": 3894, + "n_ref": 4116 + }, + "2": { + "Dice": 0.9070422535211268, + "FN": 16, + "FP": 116, + "IoU": 0.8298969072164949, + "TN": 12024, + "TP": 644, + "n_pred": 760, + "n_ref": 660 + }, + "3": { + "Dice": 0.9258098223615465, + "FN": 69, + "FP": 2, + "IoU": 0.8618677042801557, + "TN": 12286, + "TP": 443, + "n_pred": 445, + "n_ref": 512 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8917465513210194, + "FN": 482, + "FP": 444, + "IoU": 0.8046413502109705, + "TN": 14460, + "TP": 3814, + "n_pred": 4258, + "n_ref": 4296 + }, + "2": { + "Dice": 0.9123682122208366, + "FN": 564, + "FP": 209, + "IoU": 0.8388576193454242, + "TN": 14403, + "TP": 4024, + "n_pred": 4233, + "n_ref": 4588 + }, + "3": { + "Dice": 0.9656483711497021, + "FN": 79, + "FP": 192, + "IoU": 0.933578431372549, + "TN": 15120, + "TP": 3809, + "n_pred": 4001, + "n_ref": 3888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.854570107429684, + "FN": 3952, + "FP": 231, + "IoU": 0.7460693255630425, + "TN": 34727, + "TP": 12290, + "n_pred": 12521, + "n_ref": 16242 + }, + "2": { + "Dice": 0.8706778048006768, + "FN": 409, + "FP": 814, + "IoU": 0.7709737827715356, + "TN": 45860, + "TP": 4117, + "n_pred": 4931, + "n_ref": 4526 + }, + "3": { + "Dice": 0.9817799833375593, + "FN": 358, + "FP": 145, + "IoU": 0.9642120241906795, + "TN": 37145, + "TP": 13552, + "n_pred": 13697, + "n_ref": 13910 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8668831168831169, + "FN": 294, + "FP": 34, + "IoU": 0.7650429799426934, + "TN": 11404, + "TP": 1068, + "n_pred": 1102, + "n_ref": 1362 + }, + "2": { + "Dice": 0.8645011600928074, + "FN": 187, + "FP": 397, + "IoU": 0.7613404168369432, + "TN": 10353, + "TP": 1863, + "n_pred": 2260, + "n_ref": 2050 + }, + "3": { + "Dice": 0.9750291326785417, + "FN": 241, + "FP": 59, + "IoU": 0.9512749715770668, + "TN": 6643, + "TP": 5857, + "n_pred": 5916, + "n_ref": 6098 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9660114950684737, + "FN": 265, + "FP": 214, + "IoU": 0.9342574800988197, + "TN": 5514, + "TP": 6807, + "n_pred": 7021, + "n_ref": 7072 + }, + "2": { + "Dice": 0.7616926503340757, + "FN": 188, + "FP": 454, + "IoU": 0.6151079136690647, + "TN": 11132, + "TP": 1026, + "n_pred": 1480, + "n_ref": 1214 + }, + "3": { + "Dice": 0.9212053153658993, + "FN": 413, + "FP": 8, + "IoU": 0.8539208882720333, + "TN": 9918, + "TP": 2461, + "n_pred": 2469, + "n_ref": 2874 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9132867132867133, + "FN": 162, + "FP": 86, + "IoU": 0.8404118404118404, + "TN": 11246, + "TP": 1306, + "n_pred": 1392, + "n_ref": 1468 + }, + "2": { + "Dice": 0.8467966573816156, + "FN": 204, + "FP": 236, + "IoU": 0.7342995169082126, + "TN": 11144, + "TP": 1216, + "n_pred": 1452, + "n_ref": 1420 + }, + "3": { + "Dice": 0.9410157139603735, + "FN": 230, + "FP": 29, + "IoU": 0.8886021505376344, + "TN": 10475, + "TP": 2066, + "n_pred": 2095, + "n_ref": 2296 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.941066417212348, + "FN": 356, + "FP": 211, + "IoU": 0.8886925795053003, + "TN": 7706, + "TP": 4527, + "n_pred": 4738, + "n_ref": 4883 + }, + "2": { + "Dice": 0.8851720810550016, + "FN": 163, + "FP": 194, + "IoU": 0.79399884593191, + "TN": 11067, + "TP": 1376, + "n_pred": 1570, + "n_ref": 1539 + }, + "3": { + "Dice": 0.9706687524442706, + "FN": 94, + "FP": 56, + "IoU": 0.9430091185410334, + "TN": 10168, + "TP": 2482, + "n_pred": 2538, + "n_ref": 2576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9145067698259187, + "FN": 202, + "FP": 19, + "IoU": 0.84248039914469, + "TN": 11397, + "TP": 1182, + "n_pred": 1201, + "n_ref": 1384 + }, + "2": { + "Dice": 0.7515570934256055, + "FN": 76, + "FP": 642, + "IoU": 0.6019955654101996, + "TN": 10996, + "TP": 1086, + "n_pred": 1728, + "n_ref": 1162 + }, + "3": { + "Dice": 0.6965466568699485, + "FN": 6, + "FP": 820, + "IoU": 0.5343855693348365, + "TN": 11026, + "TP": 948, + "n_pred": 1768, + "n_ref": 954 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9706257982120051, + "FN": 128, + "FP": 79, + "IoU": 0.9429280397022333, + "TN": 9173, + "TP": 3420, + "n_pred": 3499, + "n_ref": 3548 + }, + "2": { + "Dice": 0.9302915082382763, + "FN": 60, + "FP": 50, + "IoU": 0.8696682464454977, + "TN": 11956, + "TP": 734, + "n_pred": 784, + "n_ref": 794 + }, + "3": { + "Dice": 0.9740334679746105, + "FN": 40, + "FP": 5, + "IoU": 0.9493813273340832, + "TN": 11911, + "TP": 844, + "n_pred": 849, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6145164428877213, + "FN": 65, + "FP": 1916, + "IoU": 0.4435393258426966, + "TN": 15640, + "TP": 1579, + "n_pred": 3495, + "n_ref": 1644 + }, + "2": { + "Dice": 0.8429259994329459, + "FN": 523, + "FP": 585, + "IoU": 0.7284979171771625, + "TN": 15119, + "TP": 2973, + "n_pred": 3558, + "n_ref": 3496 + }, + "3": { + "Dice": 0.9720976036765511, + "FN": 188, + "FP": 322, + "IoU": 0.9457100276772408, + "TN": 9806, + "TP": 8884, + "n_pred": 9206, + "n_ref": 9072 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.24478041756659466, + "FN": 116, + "FP": 933, + "IoU": 0.13945857260049221, + "TN": 17981, + "TP": 170, + "n_pred": 1103, + "n_ref": 286 + }, + "2": { + "Dice": 0.8627015008337966, + "FN": 208, + "FP": 286, + "IoU": 0.7585532746823069, + "TN": 17154, + "TP": 1552, + "n_pred": 1838, + "n_ref": 1760 + }, + "3": { + "Dice": 0.9639662027833003, + "FN": 235, + "FP": 55, + "IoU": 0.930438954185656, + "TN": 15031, + "TP": 3879, + "n_pred": 3934, + "n_ref": 4114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9665847665847666, + "FN": 229, + "FP": 179, + "IoU": 0.9353304802662863, + "TN": 6491, + "TP": 5901, + "n_pred": 6080, + "n_ref": 6130 + }, + "2": { + "Dice": 0.8783258594917788, + "FN": 151, + "FP": 256, + "IoU": 0.7830490405117271, + "TN": 10924, + "TP": 1469, + "n_pred": 1725, + "n_ref": 1620 + }, + "3": { + "Dice": 0.9803328290468987, + "FN": 82, + "FP": 48, + "IoU": 0.9614243323442137, + "TN": 9430, + "TP": 3240, + "n_pred": 3288, + "n_ref": 3322 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9000636537237429, + "FN": 75, + "FP": 82, + "IoU": 0.8182870370370371, + "TN": 5536, + "TP": 707, + "n_pred": 789, + "n_ref": 782 + }, + "3": { + "Dice": 0.9789719626168224, + "FN": 7, + "FP": 65, + "IoU": 0.9588100686498856, + "TN": 4652, + "TP": 1676, + "n_pred": 1741, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8230971128608924, + "FN": 10, + "FP": 664, + "IoU": 0.6993755575379126, + "TN": 10558, + "TP": 1568, + "n_pred": 2232, + "n_ref": 1578 + }, + "2": { + "Dice": 0.9225589225589226, + "FN": 7, + "FP": 62, + "IoU": 0.85625, + "TN": 12320, + "TP": 411, + "n_pred": 473, + "n_ref": 418 + }, + "3": { + "Dice": 0.9644859813084112, + "FN": 38, + "FP": 0, + "IoU": 0.9314079422382672, + "TN": 12246, + "TP": 516, + "n_pred": 516, + "n_ref": 554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9800658022063092, + "FN": 80, + "FP": 23, + "IoU": 0.960910815939279, + "TN": 3765, + "TP": 2532, + "n_pred": 2555, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9509090909090909, + "FN": 18, + "FP": 90, + "IoU": 0.9064124783362218, + "TN": 5246, + "TP": 1046, + "n_pred": 1136, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9881143591390941, + "FN": 28, + "FP": 9, + "IoU": 0.9765079365079365, + "TN": 4825, + "TP": 1538, + "n_pred": 1547, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7054263565891473, + "FN": 0, + "FP": 76, + "IoU": 0.5449101796407185, + "TN": 6233, + "TP": 91, + "n_pred": 167, + "n_ref": 91 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9033488063660478, + "FN": 1071, + "FP": 95, + "IoU": 0.8237339380196523, + "TN": 6185, + "TP": 5449, + "n_pred": 5544, + "n_ref": 6520 + }, + "2": { + "Dice": 0.852586542201478, + "FN": 216, + "FP": 163, + "IoU": 0.7430508474576272, + "TN": 11325, + "TP": 1096, + "n_pred": 1259, + "n_ref": 1312 + }, + "3": { + "Dice": 0.9404659188955996, + "FN": 70, + "FP": 68, + "IoU": 0.8876221498371335, + "TN": 11572, + "TP": 1090, + "n_pred": 1158, + "n_ref": 1160 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9354609929078014, + "FN": 156, + "FP": 26, + "IoU": 0.8787475016655563, + "TN": 11299, + "TP": 1319, + "n_pred": 1345, + "n_ref": 1475 + }, + "2": { + "Dice": 0.9358081979891725, + "FN": 69, + "FP": 14, + "IoU": 0.8793604651162791, + "TN": 12112, + "TP": 605, + "n_pred": 619, + "n_ref": 674 + }, + "3": { + "Dice": 0.9753963914707491, + "FN": 9, + "FP": 36, + "IoU": 0.951974386339381, + "TN": 11863, + "TP": 892, + "n_pred": 928, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.967026287798207, + "FN": 321, + "FP": 113, + "IoU": 0.9361576934392468, + "TN": 6002, + "TP": 6364, + "n_pred": 6477, + "n_ref": 6685 + }, + "2": { + "Dice": 0.9287627209426889, + "FN": 172, + "FP": 94, + "IoU": 0.867, + "TN": 10800, + "TP": 1734, + "n_pred": 1828, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9808734459674848, + "FN": 61, + "FP": 59, + "IoU": 0.9624648107600876, + "TN": 9603, + "TP": 3077, + "n_pred": 3136, + "n_ref": 3138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9617346938775511, + "FN": 10, + "FP": 50, + "IoU": 0.9262899262899262, + "TN": 5586, + "TP": 754, + "n_pred": 804, + "n_ref": 764 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 5, + "IoU": 0.0, + "TN": 6395, + "TP": 0, + "n_pred": 5, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9397000306091216, + "FN": 82, + "FP": 312, + "IoU": 0.8862586605080831, + "TN": 9336, + "TP": 3070, + "n_pred": 3382, + "n_ref": 3152 + }, + "2": { + "Dice": 0.8887599148771522, + "FN": 365, + "FP": 210, + "IoU": 0.799791086350975, + "TN": 9928, + "TP": 2297, + "n_pred": 2507, + "n_ref": 2662 + }, + "3": { + "Dice": 0.9400564174894217, + "FN": 59, + "FP": 111, + "IoU": 0.886892880904857, + "TN": 11297, + "TP": 1333, + "n_pred": 1444, + "n_ref": 1392 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9016333938294011, + "FN": 795, + "FP": 18, + "IoU": 0.82088565763384, + "TN": 8261, + "TP": 3726, + "n_pred": 3744, + "n_ref": 4521 + }, + "2": { + "Dice": 0.9215189873417722, + "FN": 74, + "FP": 50, + "IoU": 0.8544600938967136, + "TN": 11948, + "TP": 728, + "n_pred": 778, + "n_ref": 802 + }, + "3": { + "Dice": 0.8668463611859838, + "FN": 229, + "FP": 18, + "IoU": 0.7649857278782112, + "TN": 11749, + "TP": 804, + "n_pred": 822, + "n_ref": 1033 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7693124502256438, + "FN": 29, + "FP": 840, + "IoU": 0.6251078515962036, + "TN": 23282, + "TP": 1449, + "n_pred": 2289, + "n_ref": 1478 + }, + "2": { + "Dice": 0.9148999701403404, + "FN": 94, + "FP": 191, + "IoU": 0.8431480462300496, + "TN": 23783, + "TP": 1532, + "n_pred": 1723, + "n_ref": 1626 + }, + "3": { + "Dice": 0.949928469241774, + "FN": 30, + "FP": 75, + "IoU": 0.9046321525885559, + "TN": 24499, + "TP": 996, + "n_pred": 1071, + "n_ref": 1026 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8528693261370007, + "FN": 262.9642857142857, + "FP": 460.48809523809524, + "IoU": 0.7661232346504078, + "TN": 13311.035714285716, + "TP": 2422.654761904762, + "n_pred": 2883.142857142857, + "n_ref": 2685.6190476190477 + }, + "mean": { + "1": { + "Dice": 0.7789473510290124, + "FN": 399.35714285714283, + "FP": 661.75, + "IoU": 0.6745743374093607, + "TN": 12942.07142857143, + "TP": 2453.964285714286, + "n_pred": 3115.714285714286, + "n_ref": 2853.3214285714284 + }, + "2": { + "Dice": 0.8638770139933202, + "FN": 265.60714285714283, + "FP": 432.7142857142857, + "IoU": 0.7698434390485285, + "TN": 13702.107142857143, + "TP": 2056.714285714286, + "n_pred": 2489.4285714285716, + "n_ref": 2322.3214285714284 + }, + "3": { + "Dice": 0.9157836133886696, + "FN": 123.92857142857143, + "FP": 287.0, + "IoU": 0.8539519274933339, + "TN": 13288.92857142857, + "TP": 2757.285714285714, + "n_pred": 3044.285714285714, + "n_ref": 2881.214285714286 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8678488008685068, + "FN": 588, + "FP": 3429, + "IoU": 0.7665484977044226, + "TN": 40393, + "TP": 13190, + "n_pred": 16619, + "n_ref": 13778 + }, + "2": { + "Dice": 0.770737523420201, + "FN": 1125, + "FP": 1567, + "IoU": 0.6269918248579742, + "TN": 50383, + "TP": 4525, + "n_pred": 6092, + "n_ref": 5650 + }, + "3": { + "Dice": 0.909067893160049, + "FN": 224, + "FP": 1931, + "IoU": 0.8332946545989015, + "TN": 44673, + "TP": 10772, + "n_pred": 12703, + "n_ref": 10996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6385276304051833, + "FN": 276, + "FP": 7423, + "IoU": 0.4689978619215118, + "TN": 30301, + "TP": 6800, + "n_pred": 14223, + "n_ref": 7076 + }, + "2": { + "Dice": 0.8410507569011576, + "FN": 773, + "FP": 1369, + "IoU": 0.7257011140991164, + "TN": 36991, + "TP": 5667, + "n_pred": 7036, + "n_ref": 6440 + }, + "3": { + "Dice": 0.9584831364492381, + "FN": 417, + "FP": 553, + "IoU": 0.9202761568176214, + "TN": 32633, + "TP": 11197, + "n_pred": 11750, + "n_ref": 11614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7183016105417277, + "FN": 1901, + "FP": 23, + "IoU": 0.5604295179346584, + "TN": 8423, + "TP": 2453, + "n_pred": 2476, + "n_ref": 4354 + }, + "2": { + "Dice": 0.848585690515807, + "FN": 206, + "FP": 340, + "IoU": 0.7369942196531792, + "TN": 10724, + "TP": 1530, + "n_pred": 1870, + "n_ref": 1736 + }, + "3": { + "Dice": 0.9336295473479589, + "FN": 81, + "FP": 158, + "IoU": 0.8755208333333333, + "TN": 10880, + "TP": 1681, + "n_pred": 1839, + "n_ref": 1762 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9721929956410642, + "FN": 164, + "FP": 21, + "IoU": 0.9458906112898509, + "TN": 15781, + "TP": 3234, + "n_pred": 3255, + "n_ref": 3398 + }, + "2": { + "Dice": 0.8778918339206373, + "FN": 525, + "FP": 272, + "IoU": 0.7823593664664118, + "TN": 15538, + "TP": 2865, + "n_pred": 3137, + "n_ref": 3390 + }, + "3": { + "Dice": 0.9699554663488679, + "FN": 142, + "FP": 337, + "IoU": 0.9416636219705273, + "TN": 10989, + "TP": 7732, + "n_pred": 8069, + "n_ref": 7874 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9885781803859788, + "FN": 59, + "FP": 28, + "IoU": 0.9774143302180686, + "TN": 8948, + "TP": 3765, + "n_pred": 3793, + "n_ref": 3824 + }, + "2": { + "Dice": 0.9048543689320389, + "FN": 246, + "FP": 97, + "IoU": 0.8262411347517731, + "TN": 10826, + "TP": 1631, + "n_pred": 1728, + "n_ref": 1877 + }, + "3": { + "Dice": 0.9753608760577401, + "FN": 7, + "FP": 191, + "IoU": 0.9519067282001458, + "TN": 8683, + "TP": 3919, + "n_pred": 4110, + "n_ref": 3926 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 12798, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + }, + "2": { + "Dice": 0.9229583975346687, + "FN": 100, + "FP": 100, + "IoU": 0.8569384835479256, + "TN": 11402, + "TP": 1198, + "n_pred": 1298, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9863553668890237, + "FN": 53, + "FP": 37, + "IoU": 0.9730780735865988, + "TN": 9457, + "TP": 3253, + "n_pred": 3290, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42947368421052634, + "FN": 306, + "FP": 236, + "IoU": 0.2734584450402145, + "TN": 18454, + "TP": 204, + "n_pred": 440, + "n_ref": 510 + }, + "2": { + "Dice": 0.8818788855629749, + "FN": 281, + "FP": 1258, + "IoU": 0.7887149917627677, + "TN": 11916, + "TP": 5745, + "n_pred": 7003, + "n_ref": 6026 + }, + "3": { + "Dice": 0.9224686264397456, + "FN": 299, + "FP": 152, + "IoU": 0.8560944479897894, + "TN": 16066, + "TP": 2683, + "n_pred": 2835, + "n_ref": 2982 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6706948640483383, + "FN": 64, + "FP": 1026, + "IoU": 0.5045454545454545, + "TN": 17000, + "TP": 1110, + "n_pred": 2136, + "n_ref": 1174 + }, + "2": { + "Dice": 0.8500421229991575, + "FN": 814, + "FP": 1322, + "IoU": 0.7391941391941392, + "TN": 11010, + "TP": 6054, + "n_pred": 7376, + "n_ref": 6868 + }, + "3": { + "Dice": 0.797752808988764, + "FN": 159, + "FP": 1245, + "IoU": 0.6635514018691588, + "TN": 15027, + "TP": 2769, + "n_pred": 4014, + "n_ref": 2928 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9237848720161058, + "FN": 133, + "FP": 132, + "IoU": 0.8583645109567076, + "TN": 4529, + "TP": 1606, + "n_pred": 1738, + "n_ref": 1739 + }, + "3": { + "Dice": 0.9417607223476298, + "FN": 74, + "FP": 55, + "IoU": 0.8899317406143344, + "TN": 5228, + "TP": 1043, + "n_pred": 1098, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9092356687898089, + "FN": 82, + "FP": 32, + "IoU": 0.8335766423357664, + "TN": 18515, + "TP": 571, + "n_pred": 603, + "n_ref": 653 + }, + "2": { + "Dice": 0.9054814161244072, + "FN": 340, + "FP": 517, + "IoU": 0.8272873841193067, + "TN": 14238, + "TP": 4105, + "n_pred": 4622, + "n_ref": 4445 + }, + "3": { + "Dice": 0.7525844245348036, + "FN": 258, + "FP": 101, + "IoU": 0.6033149171270719, + "TN": 18295, + "TP": 546, + "n_pred": 647, + "n_ref": 804 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9564421190320471, + "FN": 167, + "FP": 166, + "IoU": 0.9165204311857609, + "TN": 15211, + "TP": 3656, + "n_pred": 3822, + "n_ref": 3823 + }, + "2": { + "Dice": 0.9196277495769881, + "FN": 399, + "FP": 361, + "IoU": 0.851213782302271, + "TN": 14092, + "TP": 4348, + "n_pred": 4709, + "n_ref": 4747 + }, + "3": { + "Dice": 0.9599217986314761, + "FN": 298, + "FP": 30, + "IoU": 0.9229323308270677, + "TN": 14944, + "TP": 3928, + "n_pred": 3958, + "n_ref": 4226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7120654396728017, + "FN": 465, + "FP": 943, + "IoU": 0.5528739282311845, + "TN": 22451, + "TP": 1741, + "n_pred": 2684, + "n_ref": 2206 + }, + "2": { + "Dice": 0.7485172004744959, + "FN": 750, + "FP": 946, + "IoU": 0.5981042654028436, + "TN": 21380, + "TP": 2524, + "n_pred": 3470, + "n_ref": 3274 + }, + "3": { + "Dice": 0.8417844278193405, + "FN": 202, + "FP": 940, + "IoU": 0.7267942583732058, + "TN": 21420, + "TP": 3038, + "n_pred": 3978, + "n_ref": 3240 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5632830942436898, + "FN": 2383, + "FP": 22, + "IoU": 0.3920626895854398, + "TN": 8844, + "TP": 1551, + "n_pred": 1573, + "n_ref": 3934 + }, + "2": { + "Dice": 0.8641618497109826, + "FN": 79, + "FP": 203, + "IoU": 0.7608142493638677, + "TN": 11621, + "TP": 897, + "n_pred": 1100, + "n_ref": 976 + }, + "3": { + "Dice": 0.9512972234865726, + "FN": 88, + "FP": 19, + "IoU": 0.9071180555555556, + "TN": 11648, + "TP": 1045, + "n_pred": 1064, + "n_ref": 1133 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6046511627906976, + "FN": 11, + "FP": 6, + "IoU": 0.43333333333333335, + "TN": 6370, + "TP": 13, + "n_pred": 19, + "n_ref": 24 + }, + "2": { + "Dice": 0.9343108504398827, + "FN": 95, + "FP": 129, + "IoU": 0.8767198679141442, + "TN": 4583, + "TP": 1593, + "n_pred": 1722, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9829538954353049, + "FN": 112, + "FP": 37, + "IoU": 0.9664791901012374, + "TN": 1955, + "TP": 4296, + "n_pred": 4333, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5137717818999438, + "FN": 16, + "FP": 1714, + "IoU": 0.34568835098335854, + "TN": 10156, + "TP": 914, + "n_pred": 2628, + "n_ref": 930 + }, + "2": { + "Dice": 0.8085897171174892, + "FN": 250, + "FP": 677, + "IoU": 0.6786828422876949, + "TN": 9915, + "TP": 1958, + "n_pred": 2635, + "n_ref": 2208 + }, + "3": { + "Dice": 0.8929001203369434, + "FN": 168, + "FP": 366, + "IoU": 0.8065217391304348, + "TN": 10040, + "TP": 2226, + "n_pred": 2592, + "n_ref": 2394 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4005505849965588, + "FN": 413, + "FP": 458, + "IoU": 0.2504302925989673, + "TN": 18038, + "TP": 291, + "n_pred": 749, + "n_ref": 704 + }, + "2": { + "Dice": 0.5580995993131082, + "FN": 133, + "FP": 1411, + "IoU": 0.3870583564906709, + "TN": 16681, + "TP": 975, + "n_pred": 2386, + "n_ref": 1108 + }, + "3": { + "Dice": 0.9076776217100777, + "FN": 198, + "FP": 479, + "IoU": 0.8309612983770287, + "TN": 15195, + "TP": 3328, + "n_pred": 3807, + "n_ref": 3526 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9303328392399947, + "FN": 136, + "FP": 381, + "IoU": 0.8697404887881078, + "TN": 2431, + "TP": 3452, + "n_pred": 3833, + "n_ref": 3588 + }, + "2": { + "Dice": 0.9652392947103274, + "FN": 24, + "FP": 45, + "IoU": 0.9328140214216164, + "TN": 5373, + "TP": 958, + "n_pred": 1003, + "n_ref": 982 + }, + "3": { + "Dice": 0.9805950840879689, + "FN": 22, + "FP": 8, + "IoU": 0.9619289340101523, + "TN": 5612, + "TP": 758, + "n_pred": 766, + "n_ref": 780 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9049615653389238, + "FN": 129, + "FP": 143, + "IoU": 0.8264199106573069, + "TN": 11233, + "TP": 1295, + "n_pred": 1438, + "n_ref": 1424 + }, + "2": { + "Dice": 0.9284738041002278, + "FN": 49, + "FP": 108, + "IoU": 0.8664965986394558, + "TN": 11624, + "TP": 1019, + "n_pred": 1127, + "n_ref": 1068 + }, + "3": { + "Dice": 0.9803485354097144, + "FN": 28, + "FP": 25, + "IoU": 0.9614545454545455, + "TN": 11425, + "TP": 1322, + "n_pred": 1347, + "n_ref": 1350 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.66794299085301, + "FN": 1542, + "FP": 19, + "IoU": 0.5014372404982433, + "TN": 9669, + "TP": 1570, + "n_pred": 1589, + "n_ref": 3112 + }, + "2": { + "Dice": 0.9034844279987666, + "FN": 111, + "FP": 202, + "IoU": 0.8239595050618672, + "TN": 11022, + "TP": 1465, + "n_pred": 1667, + "n_ref": 1576 + }, + "3": { + "Dice": 0.9717223650385605, + "FN": 51, + "FP": 70, + "IoU": 0.945, + "TN": 10600, + "TP": 2079, + "n_pred": 2149, + "n_ref": 2130 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7379310344827587, + "FN": 89, + "FP": 139, + "IoU": 0.5846994535519126, + "TN": 5851, + "TP": 321, + "n_pred": 460, + "n_ref": 410 + }, + "3": { + "Dice": 0.7342465753424657, + "FN": 10, + "FP": 475, + "IoU": 0.5800865800865801, + "TN": 5245, + "TP": 670, + "n_pred": 1145, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6580498004181714, + "FN": 113, + "FP": 1686, + "IoU": 0.4903682719546742, + "TN": 15670, + "TP": 1731, + "n_pred": 3417, + "n_ref": 1844 + }, + "2": { + "Dice": 0.9308885754583921, + "FN": 46, + "FP": 150, + "IoU": 0.8707124010554089, + "TN": 17684, + "TP": 1320, + "n_pred": 1470, + "n_ref": 1366 + }, + "3": { + "Dice": 0.9654450261780104, + "FN": 9, + "FP": 24, + "IoU": 0.9331983805668016, + "TN": 18706, + "TP": 461, + "n_pred": 485, + "n_ref": 470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8916979842842501, + "FN": 221, + "FP": 413, + "IoU": 0.8045622688039458, + "TN": 15956, + "TP": 2610, + "n_pred": 3023, + "n_ref": 2831 + }, + "2": { + "Dice": 0.8156966490299824, + "FN": 618, + "FP": 218, + "IoU": 0.6887565152643336, + "TN": 16514, + "TP": 1850, + "n_pred": 2068, + "n_ref": 2468 + }, + "3": { + "Dice": 0.959340206185567, + "FN": 307, + "FP": 186, + "IoU": 0.9218576636550959, + "TN": 12891, + "TP": 5816, + "n_pred": 6002, + "n_ref": 6123 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9718400562027985, + "FN": 338, + "FP": 143, + "IoU": 0.9452226397904566, + "TN": 10419, + "TP": 8300, + "n_pred": 8443, + "n_ref": 8638 + }, + "2": { + "Dice": 0.9273112208892026, + "FN": 112, + "FP": 94, + "IoU": 0.8644736842105263, + "TN": 17680, + "TP": 1314, + "n_pred": 1408, + "n_ref": 1426 + }, + "3": { + "Dice": 0.8285714285714286, + "FN": 8, + "FP": 64, + "IoU": 0.7073170731707317, + "TN": 18954, + "TP": 174, + "n_pred": 238, + "n_ref": 182 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.890926640926641, + "FN": 223, + "FP": 3, + "IoU": 0.803307223672759, + "TN": 5251, + "TP": 923, + "n_pred": 926, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7671517671517671, + "FN": 53, + "FP": 395, + "IoU": 0.6222596964586846, + "TN": 5214, + "TP": 738, + "n_pred": 1133, + "n_ref": 791 + }, + "3": { + "Dice": 0.7374956881683339, + "FN": 240, + "FP": 521, + "IoU": 0.5841530054644809, + "TN": 4570, + "TP": 1069, + "n_pred": 1590, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9705622608183692, + "FN": 139, + "FP": 61, + "IoU": 0.9428081212467829, + "TN": 2903, + "TP": 3297, + "n_pred": 3358, + "n_ref": 3436 + }, + "2": { + "Dice": 0.8796296296296297, + "FN": 17, + "FP": 9, + "IoU": 0.7851239669421488, + "TN": 6279, + "TP": 95, + "n_pred": 104, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9842177735409384, + "FN": 32, + "FP": 117, + "IoU": 0.9689259645464025, + "TN": 1605, + "TP": 4646, + "n_pred": 4763, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9655688622754491, + "FN": 19, + "FP": 27, + "IoU": 0.9334298118668596, + "TN": 5709, + "TP": 645, + "n_pred": 672, + "n_ref": 664 + }, + "3": { + "Dice": 0.9874396135265701, + "FN": 5, + "FP": 8, + "IoU": 0.9751908396946565, + "TN": 5876, + "TP": 511, + "n_pred": 519, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6575342465753424, + "FN": 1414, + "FP": 36, + "IoU": 0.4897959183673469, + "TN": 16358, + "TP": 1392, + "n_pred": 1428, + "n_ref": 2806 + }, + "2": { + "Dice": 0.9427312775330396, + "FN": 50, + "FP": 28, + "IoU": 0.8916666666666667, + "TN": 18480, + "TP": 642, + "n_pred": 670, + "n_ref": 692 + }, + "3": { + "Dice": 0.9812154696132597, + "FN": 10, + "FP": 24, + "IoU": 0.9631236442516269, + "TN": 18278, + "TP": 888, + "n_pred": 912, + "n_ref": 898 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.8733329288229199, + "FN": 213.8928571428571, + "FP": 233.2142857142857, + "IoU": 0.7963515500642799, + "TN": 13123.583333333334, + "TP": 1972.1666666666667, + "n_pred": 2205.3809523809527, + "n_ref": 2186.059523809524 + }, + "mean": { + "1": { + "Dice": 0.8191681204739268, + "FN": 337.25, + "FP": 312.5357142857143, + "IoU": 0.7364787564500623, + "TN": 12360.142857142857, + "TP": 2532.9285714285716, + "n_pred": 2845.464285714286, + "n_ref": 2870.1785714285716 + }, + "2": { + "Dice": 0.8722918810279822, + "FN": 194.53571428571428, + "FP": 264.7857142857143, + "IoU": 0.7805284071826665, + "TN": 13594.82142857143, + "TP": 1488.7142857142858, + "n_pred": 1753.5, + "n_ref": 1683.25 + }, + "3": { + "Dice": 0.9285387849668506, + "FN": 109.89285714285714, + "FP": 122.32142857142857, + "IoU": 0.8720474865601111, + "TN": 13415.785714285714, + "TP": 1894.857142857143, + "n_pred": 2017.1785714285713, + "n_ref": 2004.75 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6274065685164213, + "FN": 17, + "FP": 970, + "IoU": 0.4570957095709571, + "TN": 10982, + "TP": 831, + "n_pred": 1801, + "n_ref": 848 + }, + "2": { + "Dice": 0.9273903666427031, + "FN": 47, + "FP": 54, + "IoU": 0.8646112600536193, + "TN": 12054, + "TP": 645, + "n_pred": 699, + "n_ref": 692 + }, + "3": { + "Dice": 0.9816971713810316, + "FN": 29, + "FP": 4, + "IoU": 0.9640522875816994, + "TN": 11882, + "TP": 885, + "n_pred": 889, + "n_ref": 914 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9752223634053367, + "FN": 7, + "FP": 71, + "IoU": 0.9516429014259145, + "TN": 11187, + "TP": 1535, + "n_pred": 1606, + "n_ref": 1542 + }, + "2": { + "Dice": 0.8458035133376708, + "FN": 114, + "FP": 123, + "IoU": 0.7328072153325818, + "TN": 11913, + "TP": 650, + "n_pred": 773, + "n_ref": 764 + }, + "3": { + "Dice": 0.9628735285239963, + "FN": 49, + "FP": 74, + "IoU": 0.9284051222351571, + "TN": 11082, + "TP": 1595, + "n_pred": 1669, + "n_ref": 1644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9417230850922608, + "FN": 248, + "FP": 630, + "IoU": 0.8898645258404415, + "TN": 36828, + "TP": 7094, + "n_pred": 7724, + "n_ref": 7342 + }, + "2": { + "Dice": 0.8704984154422357, + "FN": 1123, + "FP": 675, + "IoU": 0.7706925137099859, + "TN": 36959, + "TP": 6043, + "n_pred": 6718, + "n_ref": 7166 + }, + "3": { + "Dice": 0.9747973798156989, + "FN": 380, + "FP": 301, + "IoU": 0.950833874810483, + "TN": 30949, + "TP": 13170, + "n_pred": 13471, + "n_ref": 13550 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.629979035639413, + "FN": 1400, + "FP": 12, + "IoU": 0.45983167559296095, + "TN": 10186, + "TP": 1202, + "n_pred": 1214, + "n_ref": 2602 + }, + "2": { + "Dice": 0.95640802092415, + "FN": 67, + "FP": 33, + "IoU": 0.9164578111946533, + "TN": 11603, + "TP": 1097, + "n_pred": 1130, + "n_ref": 1164 + }, + "3": { + "Dice": 0.9904191616766467, + "FN": 17, + "FP": 31, + "IoU": 0.9810201660735468, + "TN": 10271, + "TP": 2481, + "n_pred": 2512, + "n_ref": 2498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9201520912547528, + "FN": 19, + "FP": 2, + "IoU": 0.852112676056338, + "TN": 6258, + "TP": 121, + "n_pred": 123, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5813372520205731, + "FN": 172, + "FP": 2677, + "IoU": 0.4097783302258131, + "TN": 27173, + "TP": 1978, + "n_pred": 4655, + "n_ref": 2150 + }, + "2": { + "Dice": 0.8183211958604829, + "FN": 192, + "FP": 1704, + "IoU": 0.6925072980862796, + "TN": 25834, + "TP": 4270, + "n_pred": 5974, + "n_ref": 4462 + }, + "3": { + "Dice": 0.7127222982216143, + "FN": 164, + "FP": 676, + "IoU": 0.5536663124335813, + "TN": 30118, + "TP": 1042, + "n_pred": 1718, + "n_ref": 1206 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9380530973451328, + "FN": 12, + "FP": 2, + "IoU": 0.8833333333333333, + "TN": 12680, + "TP": 106, + "n_pred": 108, + "n_ref": 118 + }, + "2": { + "Dice": 0.8731707317073171, + "FN": 460, + "FP": 164, + "IoU": 0.7748917748917749, + "TN": 10028, + "TP": 2148, + "n_pred": 2312, + "n_ref": 2608 + }, + "3": { + "Dice": 0.9334975369458128, + "FN": 23, + "FP": 355, + "IoU": 0.8752886836027713, + "TN": 9769, + "TP": 2653, + "n_pred": 3008, + "n_ref": 2676 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9092136348295646, + "FN": 269, + "FP": 0, + "IoU": 0.8335396039603961, + "TN": 4784, + "TP": 1347, + "n_pred": 1347, + "n_ref": 1616 + }, + "2": { + "Dice": 0.8611644273832374, + "FN": 53, + "FP": 164, + "IoU": 0.7561797752808989, + "TN": 5510, + "TP": 673, + "n_pred": 837, + "n_ref": 726 + }, + "3": { + "Dice": 0.8579787234042553, + "FN": 45, + "FP": 489, + "IoU": 0.7512808570097811, + "TN": 4253, + "TP": 1613, + "n_pred": 2102, + "n_ref": 1658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 264, + "IoU": 0.0, + "TN": 18936, + "TP": 0, + "n_pred": 264, + "n_ref": 0 + }, + "2": { + "Dice": 0.8819095477386935, + "FN": 59, + "FP": 35, + "IoU": 0.7887640449438202, + "TN": 18755, + "TP": 351, + "n_pred": 386, + "n_ref": 410 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.957530218882718, + "FN": 217, + "FP": 43, + "IoU": 0.9185208398621122, + "TN": 3209, + "TP": 2931, + "n_pred": 2974, + "n_ref": 3148 + }, + "2": { + "Dice": 0.9304482225656878, + "FN": 85, + "FP": 140, + "IoU": 0.869942196531792, + "TN": 4670, + "TP": 1505, + "n_pred": 1645, + "n_ref": 1590 + }, + "3": { + "Dice": 0.9581881533101045, + "FN": 31, + "FP": 41, + "IoU": 0.919732441471572, + "TN": 5503, + "TP": 825, + "n_pred": 866, + "n_ref": 856 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9408450704225352, + "FN": 34, + "FP": 92, + "IoU": 0.8882978723404256, + "TN": 18072, + "TP": 1002, + "n_pred": 1094, + "n_ref": 1036 + }, + "2": { + "Dice": 0.9571485782939527, + "FN": 51, + "FP": 56, + "IoU": 0.9178187403993856, + "TN": 17898, + "TP": 1195, + "n_pred": 1251, + "n_ref": 1246 + }, + "3": { + "Dice": 0.9324324324324325, + "FN": 46, + "FP": 14, + "IoU": 0.8734177215189873, + "TN": 18726, + "TP": 414, + "n_pred": 428, + "n_ref": 460 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.627617148554337, + "FN": 1379, + "FP": 115, + "IoU": 0.45731928804940064, + "TN": 16447, + "TP": 1259, + "n_pred": 1374, + "n_ref": 2638 + }, + "2": { + "Dice": 0.8958357909637844, + "FN": 405, + "FP": 478, + "IoU": 0.8113247863247863, + "TN": 14520, + "TP": 3797, + "n_pred": 4275, + "n_ref": 4202 + }, + "3": { + "Dice": 0.9442105263157895, + "FN": 178, + "FP": 34, + "IoU": 0.8943170488534397, + "TN": 17194, + "TP": 1794, + "n_pred": 1828, + "n_ref": 1972 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9470233876683204, + "FN": 469, + "FP": 129, + "IoU": 0.8993774188120478, + "TN": 6857, + "TP": 5345, + "n_pred": 5474, + "n_ref": 5814 + }, + "2": { + "Dice": 0.9189931350114416, + "FN": 56, + "FP": 121, + "IoU": 0.8501270110076207, + "TN": 11619, + "TP": 1004, + "n_pred": 1125, + "n_ref": 1060 + }, + "3": { + "Dice": 0.9539594843462247, + "FN": 65, + "FP": 10, + "IoU": 0.9119718309859155, + "TN": 11948, + "TP": 777, + "n_pred": 787, + "n_ref": 842 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8610067618332081, + "FN": 166, + "FP": 574, + "IoU": 0.7559366754617414, + "TN": 3368, + "TP": 2292, + "n_pred": 2866, + "n_ref": 2458 + }, + "2": { + "Dice": 0.8962264150943396, + "FN": 141, + "FP": 13, + "IoU": 0.811965811965812, + "TN": 5581, + "TP": 665, + "n_pred": 678, + "n_ref": 806 + }, + "3": { + "Dice": 0.9695121951219512, + "FN": 6, + "FP": 54, + "IoU": 0.9408284023668639, + "TN": 5386, + "TP": 954, + "n_pred": 1008, + "n_ref": 960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6203266787658802, + "FN": 1841, + "FP": 251, + "IoU": 0.44961852144172587, + "TN": 15399, + "TP": 1709, + "n_pred": 1960, + "n_ref": 3550 + }, + "2": { + "Dice": 0.8912103746397695, + "FN": 195, + "FP": 711, + "IoU": 0.8037686809616634, + "TN": 14583, + "TP": 3711, + "n_pred": 4422, + "n_ref": 3906 + }, + "3": { + "Dice": 0.9722677506064381, + "FN": 369, + "FP": 54, + "IoU": 0.9460321510589436, + "TN": 11362, + "TP": 7415, + "n_pred": 7469, + "n_ref": 7784 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8207995526977915, + "FN": 228, + "FP": 413, + "IoU": 0.6960644855381698, + "TN": 10691, + "TP": 1468, + "n_pred": 1881, + "n_ref": 1696 + }, + "3": { + "Dice": 0.9504340520862503, + "FN": 45, + "FP": 132, + "IoU": 0.9055496264674493, + "TN": 10926, + "TP": 1697, + "n_pred": 1829, + "n_ref": 1742 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8967061080908219, + "FN": 168, + "FP": 155, + "IoU": 0.8127536231884058, + "TN": 11075, + "TP": 1402, + "n_pred": 1557, + "n_ref": 1570 + }, + "2": { + "Dice": 0.822639313254765, + "FN": 173, + "FP": 1046, + "IoU": 0.6987147800296589, + "TN": 8754, + "TP": 2827, + "n_pred": 3873, + "n_ref": 3000 + }, + "3": { + "Dice": 0.8556260138622622, + "FN": 505, + "FP": 474, + "IoU": 0.747680412371134, + "TN": 8920, + "TP": 2901, + "n_pred": 3375, + "n_ref": 3406 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.979053405820275, + "FN": 179, + "FP": 83, + "IoU": 0.9589663273296789, + "TN": 19215, + "TP": 6123, + "n_pred": 6206, + "n_ref": 6302 + }, + "2": { + "Dice": 0.8666666666666667, + "FN": 199, + "FP": 241, + "IoU": 0.7647058823529411, + "TN": 23730, + "TP": 1430, + "n_pred": 1671, + "n_ref": 1629 + }, + "3": { + "Dice": 0.9627575277337559, + "FN": 40, + "FP": 148, + "IoU": 0.9281894576012223, + "TN": 22982, + "TP": 2430, + "n_pred": 2578, + "n_ref": 2470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.924031007751938, + "FN": 209, + "FP": 85, + "IoU": 0.8587896253602305, + "TN": 10718, + "TP": 1788, + "n_pred": 1873, + "n_ref": 1997 + }, + "2": { + "Dice": 0.8996316758747698, + "FN": 55, + "FP": 163, + "IoU": 0.8175732217573222, + "TN": 11605, + "TP": 977, + "n_pred": 1140, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9163398692810457, + "FN": 105, + "FP": 23, + "IoU": 0.8455971049457177, + "TN": 11971, + "TP": 701, + "n_pred": 724, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8769679300291545, + "FN": 66, + "FP": 145, + "IoU": 0.7808930425752856, + "TN": 5437, + "TP": 752, + "n_pred": 897, + "n_ref": 818 + }, + "2": { + "Dice": 0.8800845219228738, + "FN": 174, + "FP": 53, + "IoU": 0.7858490566037736, + "TN": 5340, + "TP": 833, + "n_pred": 886, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9497021839841164, + "FN": 2, + "FP": 150, + "IoU": 0.9042218021424071, + "TN": 4813, + "TP": 1435, + "n_pred": 1585, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9373172282263191, + "FN": 426, + "FP": 67, + "IoU": 0.8820291935869825, + "TN": 8621, + "TP": 3686, + "n_pred": 3753, + "n_ref": 4112 + }, + "2": { + "Dice": 0.9631650750341064, + "FN": 11, + "FP": 16, + "IoU": 0.9289473684210526, + "TN": 12420, + "TP": 353, + "n_pred": 369, + "n_ref": 364 + }, + "3": { + "Dice": 0.9851632047477745, + "FN": 2, + "FP": 3, + "IoU": 0.9707602339181286, + "TN": 12629, + "TP": 166, + "n_pred": 169, + "n_ref": 168 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6417089678510999, + "FN": 59, + "FP": 1635, + "IoU": 0.47243849268140764, + "TN": 15989, + "TP": 1517, + "n_pred": 3152, + "n_ref": 1576 + }, + "2": { + "Dice": 0.9388984509466437, + "FN": 77, + "FP": 65, + "IoU": 0.8848337388483374, + "TN": 17967, + "TP": 1091, + "n_pred": 1156, + "n_ref": 1168 + }, + "3": { + "Dice": 0.9641434262948207, + "FN": 11, + "FP": 52, + "IoU": 0.9307692307692308, + "TN": 18290, + "TP": 847, + "n_pred": 899, + "n_ref": 858 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8819889502762431, + "FN": 921, + "FP": 147, + "IoU": 0.7888910851947025, + "TN": 7741, + "TP": 3991, + "n_pred": 4138, + "n_ref": 4912 + }, + "2": { + "Dice": 0.8001850138760407, + "FN": 157, + "FP": 275, + "IoU": 0.6669236700077101, + "TN": 11503, + "TP": 865, + "n_pred": 1140, + "n_ref": 1022 + }, + "3": { + "Dice": 0.9209272785011114, + "FN": 54, + "FP": 195, + "IoU": 0.8534432018834609, + "TN": 11101, + "TP": 1450, + "n_pred": 1645, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9812972176156256, + "FN": 277, + "FP": 129, + "IoU": 0.9632811793434024, + "TN": 14543, + "TP": 10651, + "n_pred": 10780, + "n_ref": 10928 + }, + "2": { + "Dice": 0.7793633369923162, + "FN": 445, + "FP": 158, + "IoU": 0.6384892086330936, + "TN": 23932, + "TP": 1065, + "n_pred": 1223, + "n_ref": 1510 + }, + "3": { + "Dice": 0.8887733887733887, + "FN": 406, + "FP": 22, + "IoU": 0.7998129092609916, + "TN": 23462, + "TP": 1710, + "n_pred": 1732, + "n_ref": 2116 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9619997624985156, + "FN": 399, + "FP": 241, + "IoU": 0.9267818327422491, + "TN": 16859, + "TP": 8101, + "n_pred": 8342, + "n_ref": 8500 + }, + "2": { + "Dice": 0.85, + "FN": 417, + "FP": 375, + "IoU": 0.7391304347826086, + "TN": 22564, + "TP": 2244, + "n_pred": 2619, + "n_ref": 2661 + }, + "3": { + "Dice": 0.9544815959539197, + "FN": 276, + "FP": 48, + "IoU": 0.9129266326256382, + "TN": 21879, + "TP": 3397, + "n_pred": 3445, + "n_ref": 3673 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8708502891411437, + "FN": 435, + "FP": 168, + "IoU": 0.7712443095599393, + "TN": 10164, + "TP": 2033, + "n_pred": 2201, + "n_ref": 2468 + }, + "2": { + "Dice": 0.5758564437194127, + "FN": 419, + "FP": 101, + "IoU": 0.4043528064146621, + "TN": 11927, + "TP": 353, + "n_pred": 454, + "n_ref": 772 + }, + "3": { + "Dice": 0.834850455136541, + "FN": 220, + "FP": 34, + "IoU": 0.7165178571428571, + "TN": 11904, + "TP": 642, + "n_pred": 676, + "n_ref": 862 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9699978415713361, + "FN": 73, + "FP": 66, + "IoU": 0.9417435037720033, + "TN": 4014, + "TP": 2247, + "n_pred": 2313, + "n_ref": 2320 + }, + "2": { + "Dice": 0.9099099099099099, + "FN": 25, + "FP": 35, + "IoU": 0.8347107438016529, + "TN": 6037, + "TP": 303, + "n_pred": 338, + "n_ref": 328 + }, + "3": { + "Dice": 0.8857142857142857, + "FN": 9, + "FP": 7, + "IoU": 0.7948717948717948, + "TN": 6322, + "TP": 62, + "n_pred": 69, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8738525700928289, + "FN": 138.86904761904762, + "FP": 222.2738095238095, + "IoU": 0.7889710903757754, + "TN": 9726.702380952382, + "TP": 1340.7261904761906, + "n_pred": 1563.0, + "n_ref": 1479.5952380952378 + }, + "mean": { + "1": { + "Dice": 0.850975210781249, + "FN": 170.64285714285714, + "FP": 344.57142857142856, + "IoU": 0.7567806208028619, + "TN": 9406.464285714286, + "TP": 1506.892857142857, + "n_pred": 1851.4642857142858, + "n_ref": 1677.5357142857142 + }, + "2": { + "Dice": 0.8774803908161879, + "FN": 179.60714285714286, + "FP": 167.71428571428572, + "IoU": 0.7868105221774124, + "TN": 9707.392857142857, + "TP": 1373.857142857143, + "n_pred": 1541.5714285714287, + "n_ref": 1553.4642857142858 + }, + "3": { + "Dice": 0.8931021086810496, + "FN": 66.35714285714286, + "FP": 154.53571428571428, + "IoU": 0.823322128147052, + "TN": 10066.25, + "TP": 1141.4285714285713, + "n_pred": 1295.9642857142858, + "n_ref": 1207.7857142857142 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7567567567567568, + "FN": 2, + "FP": 7, + "IoU": 0.6086956521739131, + "TN": 6377, + "TP": 14, + "n_pred": 21, + "n_ref": 16 + }, + "2": { + "Dice": 0.8238993710691824, + "FN": 86, + "FP": 250, + "IoU": 0.7005347593582888, + "TN": 5278, + "TP": 786, + "n_pred": 1036, + "n_ref": 872 + }, + "3": { + "Dice": 0.9529780564263323, + "FN": 225, + "FP": 0, + "IoU": 0.9101796407185628, + "TN": 3895, + "TP": 2280, + "n_pred": 2280, + "n_ref": 2505 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9286097691894794, + "FN": 226, + "FP": 40, + "IoU": 0.8667334669338678, + "TN": 10804, + "TP": 1730, + "n_pred": 1770, + "n_ref": 1956 + }, + "2": { + "Dice": 0.8762376237623762, + "FN": 89, + "FP": 61, + "IoU": 0.7797356828193832, + "TN": 12119, + "TP": 531, + "n_pred": 592, + "n_ref": 620 + }, + "3": { + "Dice": 0.9484162895927601, + "FN": 32, + "FP": 25, + "IoU": 0.9018932874354562, + "TN": 12219, + "TP": 524, + "n_pred": 549, + "n_ref": 556 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9124860646599777, + "FN": 121, + "FP": 193, + "IoU": 0.8390568939005638, + "TN": 4449, + "TP": 1637, + "n_pred": 1830, + "n_ref": 1758 + }, + "2": { + "Dice": 0.8808446455505279, + "FN": 30, + "FP": 49, + "IoU": 0.7870619946091644, + "TN": 6029, + "TP": 292, + "n_pred": 341, + "n_ref": 322 + }, + "3": { + "Dice": 0.8997134670487106, + "FN": 5, + "FP": 30, + "IoU": 0.8177083333333334, + "TN": 6208, + "TP": 157, + "n_pred": 187, + "n_ref": 162 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6438474870017331, + "FN": 785, + "FP": 37, + "IoU": 0.4747603833865815, + "TN": 17635, + "TP": 743, + "n_pred": 780, + "n_ref": 1528 + }, + "2": { + "Dice": 0.6313624678663239, + "FN": 24, + "FP": 693, + "IoU": 0.4613072877535687, + "TN": 17869, + "TP": 614, + "n_pred": 1307, + "n_ref": 638 + }, + "3": { + "Dice": 0.7166666666666667, + "FN": 18, + "FP": 934, + "IoU": 0.5584415584415584, + "TN": 17044, + "TP": 1204, + "n_pred": 2138, + "n_ref": 1222 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6208844730177284, + "FN": 185, + "FP": 3707, + "IoU": 0.45020483119084614, + "TN": 12121, + "TP": 3187, + "n_pred": 6894, + "n_ref": 3372 + }, + "2": { + "Dice": 0.8581380620645979, + "FN": 346, + "FP": 550, + "IoU": 0.7515252357182474, + "TN": 15594, + "TP": 2710, + "n_pred": 3260, + "n_ref": 3056 + }, + "3": { + "Dice": 0.9611584327086883, + "FN": 65, + "FP": 163, + "IoU": 0.9252213840603477, + "TN": 16151, + "TP": 2821, + "n_pred": 2984, + "n_ref": 2886 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9826466517619504, + "FN": 51, + "FP": 112, + "IoU": 0.9658853076601088, + "TN": 1622, + "TP": 4615, + "n_pred": 4727, + "n_ref": 4666 + }, + "2": { + "Dice": 0.9164969450101833, + "FN": 34, + "FP": 48, + "IoU": 0.8458646616541353, + "TN": 5868, + "TP": 450, + "n_pred": 498, + "n_ref": 484 + }, + "3": { + "Dice": 0.9838337182448037, + "FN": 7, + "FP": 14, + "IoU": 0.9681818181818181, + "TN": 5740, + "TP": 639, + "n_pred": 653, + "n_ref": 646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8372355430183357, + "FN": 34, + "FP": 543, + "IoU": 0.7200388161086851, + "TN": 10739, + "TP": 1484, + "n_pred": 2027, + "n_ref": 1518 + }, + "2": { + "Dice": 0.8543799772468714, + "FN": 558, + "FP": 210, + "IoU": 0.7457795431976166, + "TN": 9779, + "TP": 2253, + "n_pred": 2463, + "n_ref": 2811 + }, + "3": { + "Dice": 0.5964912280701754, + "FN": 5, + "FP": 409, + "IoU": 0.425, + "TN": 12080, + "TP": 306, + "n_pred": 715, + "n_ref": 311 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8737113402061856, + "FN": 196, + "FP": 0, + "IoU": 0.7757437070938215, + "TN": 5526, + "TP": 678, + "n_pred": 678, + "n_ref": 874 + }, + "2": { + "Dice": 0.9228100607111882, + "FN": 334, + "FP": 111, + "IoU": 0.856682769726248, + "TN": 3295, + "TP": 2660, + "n_pred": 2771, + "n_ref": 2994 + }, + "3": { + "Dice": 0.9452229299363057, + "FN": 34, + "FP": 52, + "IoU": 0.8961352657004831, + "TN": 5572, + "TP": 742, + "n_pred": 794, + "n_ref": 776 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8852717248621685, + "FN": 856, + "FP": 18, + "IoU": 0.7941592086669806, + "TN": 14954, + "TP": 3372, + "n_pred": 3390, + "n_ref": 4228 + }, + "2": { + "Dice": 0.8884578079534433, + "FN": 180, + "FP": 50, + "IoU": 0.7993019197207679, + "TN": 18054, + "TP": 916, + "n_pred": 966, + "n_ref": 1096 + }, + "3": { + "Dice": 0.9590504451038576, + "FN": 18, + "FP": 51, + "IoU": 0.9213226909920182, + "TN": 18323, + "TP": 808, + "n_pred": 859, + "n_ref": 826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8856130946683258, + "FN": 1070, + "FP": 125, + "IoU": 0.7947088129187425, + "TN": 19779, + "TP": 4626, + "n_pred": 4751, + "n_ref": 5696 + }, + "2": { + "Dice": 0.9324720068906115, + "FN": 473, + "FP": 311, + "IoU": 0.8734871712118767, + "TN": 19403, + "TP": 5413, + "n_pred": 5724, + "n_ref": 5886 + }, + "3": { + "Dice": 0.9286269286269286, + "FN": 537, + "FP": 106, + "IoU": 0.8667633651056775, + "TN": 20774, + "TP": 4183, + "n_pred": 4289, + "n_ref": 4720 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9174757281553398, + "FN": 180, + "FP": 92, + "IoU": 0.8475336322869955, + "TN": 11016, + "TP": 1512, + "n_pred": 1604, + "n_ref": 1692 + }, + "3": { + "Dice": 0.8988439306358381, + "FN": 88, + "FP": 52, + "IoU": 0.8162729658792651, + "TN": 12038, + "TP": 622, + "n_pred": 674, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8167155425219942, + "FN": 175, + "FP": 75, + "IoU": 0.6902106567534076, + "TN": 11993, + "TP": 557, + "n_pred": 632, + "n_ref": 732 + }, + "3": { + "Dice": 0.8979057591623036, + "FN": 18, + "FP": 138, + "IoU": 0.8147268408551069, + "TN": 11958, + "TP": 686, + "n_pred": 824, + "n_ref": 704 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9668820678513732, + "FN": 128, + "FP": 36, + "IoU": 0.9358874120406567, + "TN": 10242, + "TP": 2394, + "n_pred": 2430, + "n_ref": 2522 + }, + "2": { + "Dice": 0.9230076542098155, + "FN": 19, + "FP": 152, + "IoU": 0.8570234113712375, + "TN": 11604, + "TP": 1025, + "n_pred": 1177, + "n_ref": 1044 + }, + "3": { + "Dice": 0.9404580152671755, + "FN": 74, + "FP": 4, + "IoU": 0.8876080691642652, + "TN": 12106, + "TP": 616, + "n_pred": 620, + "n_ref": 690 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5836575875486382, + "FN": 2, + "FP": 212, + "IoU": 0.41208791208791207, + "TN": 6036, + "TP": 150, + "n_pred": 362, + "n_ref": 152 + }, + "2": { + "Dice": 0.9070631970260223, + "FN": 46, + "FP": 54, + "IoU": 0.8299319727891157, + "TN": 5812, + "TP": 488, + "n_pred": 542, + "n_ref": 534 + }, + "3": { + "Dice": 0.9518072289156626, + "FN": 2, + "FP": 30, + "IoU": 0.9080459770114943, + "TN": 6052, + "TP": 316, + "n_pred": 346, + "n_ref": 318 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9558599695585996, + "FN": 14, + "FP": 15, + "IoU": 0.9154518950437318, + "TN": 6057, + "TP": 314, + "n_pred": 329, + "n_ref": 328 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9617021276595744, + "FN": 16, + "FP": 20, + "IoU": 0.9262295081967213, + "TN": 12312, + "TP": 452, + "n_pred": 472, + "n_ref": 468 + }, + "2": { + "Dice": 0.9374782910732893, + "FN": 205, + "FP": 155, + "IoU": 0.8823144818568159, + "TN": 9741, + "TP": 2699, + "n_pred": 2854, + "n_ref": 2904 + }, + "3": { + "Dice": 0.9552473174561633, + "FN": 41, + "FP": 130, + "IoU": 0.9143286573146293, + "TN": 10804, + "TP": 1825, + "n_pred": 1955, + "n_ref": 1866 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6856472952604253, + "FN": 133, + "FP": 1744, + "IoU": 0.5216615698267074, + "TN": 8876, + "TP": 2047, + "n_pred": 3791, + "n_ref": 2180 + }, + "2": { + "Dice": 0.8790631940238239, + "FN": 115, + "FP": 484, + "IoU": 0.784221902017291, + "TN": 10024, + "TP": 2177, + "n_pred": 2661, + "n_ref": 2292 + }, + "3": { + "Dice": 0.7790038771249628, + "FN": 64, + "FP": 677, + "IoU": 0.6380068392769908, + "TN": 10753, + "TP": 1306, + "n_pred": 1983, + "n_ref": 1370 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.82560706401766, + "FN": 79, + "FP": 0, + "IoU": 0.7030075187969925, + "TN": 6134, + "TP": 187, + "n_pred": 187, + "n_ref": 266 + }, + "2": { + "Dice": 0.8377952755905512, + "FN": 798, + "FP": 129, + "IoU": 0.7208672086720868, + "TN": 3079, + "TP": 2394, + "n_pred": 2523, + "n_ref": 3192 + }, + "3": { + "Dice": 0.9270489342539778, + "FN": 182, + "FP": 61, + "IoU": 0.8640179071068831, + "TN": 4613, + "TP": 1544, + "n_pred": 1605, + "n_ref": 1726 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.945212364915808, + "FN": 353, + "FP": 83, + "IoU": 0.896116273528711, + "TN": 2203, + "TP": 3761, + "n_pred": 3844, + "n_ref": 4114 + }, + "2": { + "Dice": 0.9348171701112877, + "FN": 88, + "FP": 35, + "IoU": 0.8776119402985074, + "TN": 5395, + "TP": 882, + "n_pred": 917, + "n_ref": 970 + }, + "3": { + "Dice": 0.9673286354900704, + "FN": 9, + "FP": 42, + "IoU": 0.9367245657568238, + "TN": 5594, + "TP": 755, + "n_pred": 797, + "n_ref": 764 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8818380743982495, + "FN": 20, + "FP": 412, + "IoU": 0.7886497064579256, + "TN": 10756, + "TP": 1612, + "n_pred": 2024, + "n_ref": 1632 + }, + "2": { + "Dice": 0.7918781725888325, + "FN": 14, + "FP": 273, + "IoU": 0.6554621848739496, + "TN": 11967, + "TP": 546, + "n_pred": 819, + "n_ref": 560 + }, + "3": { + "Dice": 0.5741496598639456, + "FN": 4, + "FP": 622, + "IoU": 0.4026717557251908, + "TN": 11752, + "TP": 422, + "n_pred": 1044, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8343291689299294, + "FN": 208, + "FP": 97, + "IoU": 0.7157502329916123, + "TN": 18127, + "TP": 768, + "n_pred": 865, + "n_ref": 976 + }, + "2": { + "Dice": 0.911595291760581, + "FN": 480, + "FP": 226, + "IoU": 0.8375517717441325, + "TN": 14854, + "TP": 3640, + "n_pred": 3866, + "n_ref": 4120 + }, + "3": { + "Dice": 0.9609595484477893, + "FN": 95, + "FP": 71, + "IoU": 0.9248528746038932, + "TN": 16991, + "TP": 2043, + "n_pred": 2114, + "n_ref": 2138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9379968203497615, + "FN": 84, + "FP": 33, + "IoU": 0.8832335329341318, + "TN": 5398, + "TP": 885, + "n_pred": 918, + "n_ref": 969 + }, + "3": { + "Dice": 0.9823917828319882, + "FN": 26, + "FP": 22, + "IoU": 0.9653929343907715, + "TN": 5013, + "TP": 1339, + "n_pred": 1361, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.819238998976649, + "FN": 171, + "FP": 1772, + "IoU": 0.6938228805546801, + "TN": 19254, + "TP": 4403, + "n_pred": 6175, + "n_ref": 4574 + }, + "2": { + "Dice": 0.8732394366197183, + "FN": 446, + "FP": 346, + "IoU": 0.775, + "TN": 22080, + "TP": 2728, + "n_pred": 3074, + "n_ref": 3174 + }, + "3": { + "Dice": 0.899604743083004, + "FN": 136, + "FP": 499, + "IoU": 0.8175287356321839, + "TN": 22120, + "TP": 2845, + "n_pred": 3344, + "n_ref": 2981 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9220338983050848, + "FN": 30, + "FP": 16, + "IoU": 0.8553459119496856, + "TN": 6082, + "TP": 272, + "n_pred": 288, + "n_ref": 302 + }, + "2": { + "Dice": 0.8979396262577863, + "FN": 113, + "FP": 100, + "IoU": 0.8147826086956522, + "TN": 5250, + "TP": 937, + "n_pred": 1037, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9692622950819673, + "FN": 85, + "FP": 5, + "IoU": 0.9403578528827038, + "TN": 4891, + "TP": 1419, + "n_pred": 1424, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9802731411229135, + "FN": 27, + "FP": 51, + "IoU": 0.9613095238095238, + "TN": 4384, + "TP": 1938, + "n_pred": 1989, + "n_ref": 1965 + }, + "2": { + "Dice": 0.8992907801418439, + "FN": 66, + "FP": 147, + "IoU": 0.8170103092783505, + "TN": 5236, + "TP": 951, + "n_pred": 1098, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9786050492083869, + "FN": 84, + "FP": 16, + "IoU": 0.9581064097193129, + "TN": 4013, + "TP": 2287, + "n_pred": 2303, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8830851842811813, + "FN": 71, + "FP": 408, + "IoU": 0.7906468531468531, + "TN": 4112, + "TP": 1809, + "n_pred": 2217, + "n_ref": 1880 + }, + "2": { + "Dice": 0.8865546218487395, + "FN": 46, + "FP": 62, + "IoU": 0.7962264150943397, + "TN": 5870, + "TP": 422, + "n_pred": 484, + "n_ref": 468 + }, + "3": { + "Dice": 0.7527777777777778, + "FN": 4, + "FP": 174, + "IoU": 0.6035634743875279, + "TN": 5951, + "TP": 271, + "n_pred": 445, + "n_ref": 275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2909795/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8678058365443038, + "FN": 199.77142857142854, + "FP": 272.79285714285714, + "IoU": 0.787928184757934, + "TN": 11996.388095238097, + "TP": 1931.047619047619, + "n_pred": 2203.840476190476, + "n_ref": 2130.8190476190475 + }, + "mean": { + "1": { + "Dice": 0.8144060286012307, + "FN": 291.24285714285713, + "FP": 408.24285714285713, + "IoU": 0.7235055745125503, + "TN": 11412.185714285713, + "TP": 2288.328571428571, + "n_pred": 2696.571428571429, + "n_ref": 2579.5714285714284 + }, + "2": { + "Dice": 0.8679207528558092, + "FN": 207.4642857142857, + "FP": 253.74285714285716, + "IoU": 0.7775578964988485, + "TN": 12326.485714285714, + "TP": 1612.3071428571432, + "n_pred": 1866.05, + "n_ref": 1819.7714285714287 + }, + "3": { + "Dice": 0.9210907281758717, + "FN": 100.60714285714286, + "FP": 156.39285714285717, + "IoU": 0.8627210832624034, + "TN": 12250.492857142857, + "TP": 1892.5071428571428, + "n_pred": 2048.9, + "n_ref": 1993.1142857142854 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_006/summary.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_006/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..c5f08479eee68b411739ee0e43b94cfa06ebee75 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_006/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8996798929203808, + "FN": 887.2666666666668, + "FP": 821.7533333333332, + "IoU": 0.8239690565817744, + "TN": 843412.7733333334, + "TP": 9306.846666666666, + "n_pred": 10128.6, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8833468606224306, + "FN": 1047.06, + "FP": 844.92, + "IoU": 0.797714444981672, + "TN": 843729.66, + "TP": 8807.0, + "n_pred": 9651.92, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8756506592663474, + "FN": 1176.9, + "FP": 1107.28, + "IoU": 0.7827178971811765, + "TN": 843265.86, + "TP": 8878.6, + "n_pred": 9985.88, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9400421588723641, + "FN": 437.84, + "FP": 513.06, + "IoU": 0.8914748275824752, + "TN": 843242.8, + "TP": 10234.94, + "n_pred": 10748.0, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9338321660068735, + "FN": 713, + "FP": 808, + "IoU": 0.8758772645666721, + "TN": 1093666, + "TP": 10733, + "n_pred": 11541, + "n_ref": 11446 + }, + "2": { + "Dice": 0.856574539363484, + "FN": 1183, + "FP": 2927, + "IoU": 0.7491301959348104, + "TN": 1089537, + "TP": 12273, + "n_pred": 15200, + "n_ref": 13456 + }, + "3": { + "Dice": 0.945372840893133, + "FN": 646, + "FP": 2077, + "IoU": 0.896404793608522, + "TN": 1079635, + "TP": 23562, + "n_pred": 25639, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8767876787678768, + "FN": 96, + "FP": 1248, + "IoU": 0.7806072477962782, + "TN": 1099794, + "TP": 4782, + "n_pred": 6030, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8954503603517795, + "FN": 1878, + "FP": 1415, + "IoU": 0.8106927277953435, + "TN": 1088525, + "TP": 14102, + "n_pred": 15517, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9642520913468005, + "FN": 558, + "FP": 771, + "IoU": 0.9309717966031268, + "TN": 1086667, + "TP": 17924, + "n_pred": 18695, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9046769011067476, + "FN": 1268, + "FP": 334, + "IoU": 0.8259452411994785, + "TN": 900236, + "TP": 7602, + "n_pred": 7936, + "n_ref": 8870 + }, + "2": { + "Dice": 0.9033199835310851, + "FN": 1719, + "FP": 864, + "IoU": 0.8236860068259386, + "TN": 894790, + "TP": 12067, + "n_pred": 12931, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9759966506954458, + "FN": 431, + "FP": 601, + "IoU": 0.9531186117294326, + "TN": 887427, + "TP": 20981, + "n_pred": 21582, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7405825574442642, + "FN": 2643, + "FP": 394, + "IoU": 0.5880358111774281, + "TN": 902068, + "TP": 4335, + "n_pred": 4729, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8973613278479217, + "FN": 1673, + "FP": 1221, + "IoU": 0.8138308137664844, + "TN": 893895, + "TP": 12651, + "n_pred": 13872, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9725450202624728, + "FN": 515, + "FP": 508, + "IoU": 0.9465573085362031, + "TN": 890298, + "TP": 18119, + "n_pred": 18627, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9508644610458912, + "FN": 1904, + "FP": 398, + "IoU": 0.9063313802083334, + "TN": 1401184, + "TP": 22274, + "n_pred": 22672, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8989326217478318, + "FN": 1609, + "FP": 1421, + "IoU": 0.8164192668888216, + "TN": 1409255, + "TP": 13475, + "n_pred": 14896, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9761051844270362, + "FN": 480, + "FP": 734, + "IoU": 0.9533256439830834, + "TN": 1399750, + "TP": 24796, + "n_pred": 25530, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9554753987488024, + "FN": 597, + "FP": 983, + "IoU": 0.9147466681055415, + "TN": 1407227, + "TP": 16953, + "n_pred": 17936, + "n_ref": 17550 + }, + "2": { + "Dice": 0.9035816289681888, + "FN": 1306, + "FP": 1631, + "IoU": 0.8241212048625666, + "TN": 1409061, + "TP": 13762, + "n_pred": 15393, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9729072748165827, + "FN": 687, + "FP": 539, + "IoU": 0.9472438573088343, + "TN": 1402521, + "TP": 22013, + "n_pred": 22552, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9512195121951219, + "FN": 444, + "FP": 460, + "IoU": 0.9069767441860465, + "TN": 752330, + "TP": 8814, + "n_pred": 9274, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8745195092412196, + "FN": 1106, + "FP": 1277, + "IoU": 0.7770188078974455, + "TN": 751361, + "TP": 8304, + "n_pred": 9581, + "n_ref": 9410 + }, + "3": { + "Dice": 0.972174402954709, + "FN": 486, + "FP": 403, + "IoU": 0.9458554114136062, + "TN": 745629, + "TP": 15530, + "n_pred": 15933, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8204064703442555, + "FN": 962, + "FP": 770, + "IoU": 0.6954992967651196, + "TN": 756360, + "TP": 3956, + "n_pred": 4726, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8379746835443038, + "FN": 2301, + "FP": 1155, + "IoU": 0.7211328976034859, + "TN": 749655, + "TP": 8937, + "n_pred": 10092, + "n_ref": 11238 + }, + "3": { + "Dice": 0.951787672735249, + "FN": 1064, + "FP": 35, + "IoU": 0.9080103791746882, + "TN": 750101, + "TP": 10848, + "n_pred": 10883, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9664078937821955, + "FN": 524, + "FP": 402, + "IoU": 0.9349992980485751, + "TN": 1064026, + "TP": 13320, + "n_pred": 13722, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8942641355378649, + "FN": 1108, + "FP": 964, + "IoU": 0.8087502307550305, + "TN": 1067438, + "TP": 8762, + "n_pred": 9726, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9761328640563133, + "FN": 654, + "FP": 214, + "IoU": 0.9533784509614351, + "TN": 1059654, + "TP": 17750, + "n_pred": 17964, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9593477775295957, + "FN": 411, + "FP": 681, + "IoU": 0.9218716462760249, + "TN": 1064295, + "TP": 12885, + "n_pred": 13566, + "n_ref": 13296 + }, + "2": { + "Dice": 0.877730523873961, + "FN": 1719, + "FP": 811, + "IoU": 0.7821031780208423, + "TN": 1066661, + "TP": 9081, + "n_pred": 9892, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9621159848858223, + "FN": 585, + "FP": 568, + "IoU": 0.9269975940230467, + "TN": 1062478, + "TP": 14641, + "n_pred": 15209, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9389428747963826, + "FN": 774, + "FP": 313, + "IoU": 0.8849126521969296, + "TN": 1096475, + "TP": 8358, + "n_pred": 8671, + "n_ref": 9132 + }, + "2": { + "Dice": 0.874294992309007, + "FN": 1251, + "FP": 1691, + "IoU": 0.7766643892811053, + "TN": 1092747, + "TP": 10231, + "n_pred": 11922, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9326147914475991, + "FN": 853, + "FP": 685, + "IoU": 0.8737377883589196, + "TN": 1093739, + "TP": 10643, + "n_pred": 11328, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8735435229609322, + "FN": 503, + "FP": 235, + "IoU": 0.7754791603285671, + "TN": 1102633, + "TP": 2549, + "n_pred": 2784, + "n_ref": 3052 + }, + "2": { + "Dice": 0.878923429688381, + "FN": 661, + "FP": 2560, + "IoU": 0.7839994635193133, + "TN": 1091008, + "TP": 11691, + "n_pred": 14251, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7871125611745514, + "FN": 385, + "FP": 1181, + "IoU": 0.6489576328177539, + "TN": 1101459, + "TP": 2895, + "n_pred": 4076, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8743742550655542, + "FN": 1828, + "FP": 280, + "IoU": 0.7767894959762812, + "TN": 1137436, + "TP": 7336, + "n_pred": 7616, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9145918367346939, + "FN": 1490, + "FP": 1858, + "IoU": 0.8426248002256276, + "TN": 1125606, + "TP": 17926, + "n_pred": 19784, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9339075408683424, + "FN": 1304, + "FP": 200, + "IoU": 0.8760098928276999, + "TN": 1134750, + "TP": 10626, + "n_pred": 10826, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7120685661338892, + "FN": 929, + "FP": 314, + "IoU": 0.5528776978417266, + "TN": 1144100, + "TP": 1537, + "n_pred": 1851, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8574890834256106, + "FN": 3915, + "FP": 2906, + "IoU": 0.7505303196547436, + "TN": 1119538, + "TP": 20521, + "n_pred": 23427, + "n_ref": 24436 + }, + "3": { + "Dice": 0.6313094367227505, + "FN": 127, + "FP": 2897, + "IoU": 0.46125066809192944, + "TN": 1141267, + "TP": 2589, + "n_pred": 5486, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9500277860898559, + "FN": 734, + "FP": 435, + "IoU": 0.9048123117010015, + "TN": 788519, + "TP": 11112, + "n_pred": 11547, + "n_ref": 11846 + }, + "2": { + "Dice": 0.88762233736327, + "FN": 925, + "FP": 1027, + "IoU": 0.7979505227202153, + "TN": 791139, + "TP": 7709, + "n_pred": 8736, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9574468085106383, + "FN": 553, + "FP": 167, + "IoU": 0.9183673469387755, + "TN": 791980, + "TP": 8100, + "n_pred": 8267, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.845227752265111, + "FN": 534, + "FP": 713, + "IoU": 0.7319432502149613, + "TN": 796148, + "TP": 3405, + "n_pred": 4118, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9137010676156584, + "FN": 1355, + "FP": 779, + "IoU": 0.8411138411138411, + "TN": 787369, + "TP": 11297, + "n_pred": 12076, + "n_ref": 12652 + }, + "3": { + "Dice": 0.893239625167336, + "FN": 177, + "FP": 461, + "IoU": 0.8070758996068945, + "TN": 797493, + "TP": 2669, + "n_pred": 3130, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9514516406115787, + "FN": 346, + "FP": 1067, + "IoU": 0.9073989121174388, + "TN": 1332581, + "TP": 13846, + "n_pred": 14913, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8920748331296419, + "FN": 1117, + "FP": 1179, + "IoU": 0.805176071277047, + "TN": 1336055, + "TP": 9489, + "n_pred": 10668, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9756196081825789, + "FN": 421, + "FP": 424, + "IoU": 0.9523997296079315, + "TN": 1330088, + "TP": 16907, + "n_pred": 17331, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.782848096909629, + "FN": 181, + "FP": 2974, + "IoU": 0.6431802759556662, + "TN": 1338998, + "TP": 5687, + "n_pred": 8661, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8855199541096451, + "FN": 1308, + "FP": 1486, + "IoU": 0.7945588235294118, + "TN": 1334240, + "TP": 10806, + "n_pred": 12292, + "n_ref": 12114 + }, + "3": { + "Dice": 0.958894645941278, + "FN": 514, + "FP": 438, + "IoU": 0.9210351692103517, + "TN": 1335784, + "TP": 11104, + "n_pred": 11542, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8454565392207033, + "FN": 897, + "FP": 3331, + "IoU": 0.7322864560248211, + "TN": 836175, + "TP": 11565, + "n_pred": 14896, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8708265203860963, + "FN": 1193, + "FP": 1256, + "IoU": 0.7712070254110612, + "TN": 841264, + "TP": 8255, + "n_pred": 9511, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9755951733884117, + "FN": 539, + "FP": 359, + "IoU": 0.9523531596540563, + "TN": 833121, + "TP": 17949, + "n_pred": 18308, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8963772967343598, + "FN": 913, + "FP": 480, + "IoU": 0.812213534645457, + "TN": 844550, + "TP": 6025, + "n_pred": 6505, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8820992418395606, + "FN": 1577, + "FP": 1020, + "IoU": 0.7890675763482781, + "TN": 839656, + "TP": 9715, + "n_pred": 10735, + "n_ref": 11292 + }, + "3": { + "Dice": 0.963154442686832, + "FN": 514, + "FP": 441, + "IoU": 0.9289275880032746, + "TN": 838531, + "TP": 12482, + "n_pred": 12923, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8704020145696555, + "FN": 1017, + "FP": 424, + "IoU": 0.7705414012738854, + "TN": 845688, + "TP": 4839, + "n_pred": 5263, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8711168639053254, + "FN": 1298, + "FP": 1490, + "IoU": 0.7716625716625717, + "TN": 839758, + "TP": 9422, + "n_pred": 10912, + "n_ref": 10720 + }, + "3": { + "Dice": 0.94528802120993, + "FN": 1190, + "FP": 172, + "IoU": 0.8962522851919561, + "TN": 838840, + "TP": 11766, + "n_pred": 11938, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8573963184741628, + "FN": 171, + "FP": 472, + "IoU": 0.750388198757764, + "TN": 849392, + "TP": 1933, + "n_pred": 2405, + "n_ref": 2104 + }, + "2": { + "Dice": 0.9034845021853322, + "FN": 1320, + "FP": 1087, + "IoU": 0.8239596284648577, + "TN": 838295, + "TP": 11266, + "n_pred": 12353, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9458003895955082, + "FN": 492, + "FP": 454, + "IoU": 0.8971739130434783, + "TN": 842768, + "TP": 8254, + "n_pred": 8708, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9049796120103794, + "FN": 2102, + "FP": 205, + "IoU": 0.8264500112841345, + "TN": 783747, + "TP": 10986, + "n_pred": 11191, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8576208800401539, + "FN": 1165, + "FP": 1388, + "IoU": 0.7507322788517867, + "TN": 786798, + "TP": 7689, + "n_pred": 9077, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9577952637325402, + "FN": 738, + "FP": 383, + "IoU": 0.9190087421429087, + "TN": 783199, + "TP": 12720, + "n_pred": 13103, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8304419972846583, + "FN": 2163, + "FP": 85, + "IoU": 0.7100477234618857, + "TN": 789287, + "TP": 5505, + "n_pred": 5590, + "n_ref": 7668 + }, + "2": { + "Dice": 0.88617553898028, + "FN": 949, + "FP": 1279, + "IoU": 0.7956150811852124, + "TN": 786139, + "TP": 8673, + "n_pred": 9952, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9478105050957554, + "FN": 569, + "FP": 363, + "IoU": 0.9007982969664715, + "TN": 787645, + "TP": 8463, + "n_pred": 8826, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9237484981978374, + "FN": 935, + "FP": 969, + "IoU": 0.8583017042494604, + "TN": 883233, + "TP": 11533, + "n_pred": 12502, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8756347609466322, + "FN": 1199, + "FP": 1397, + "IoU": 0.7787814230933106, + "TN": 884935, + "TP": 9139, + "n_pred": 10536, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9484427949007584, + "FN": 497, + "FP": 781, + "IoU": 0.9019412261183151, + "TN": 883637, + "TP": 11755, + "n_pred": 12536, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7841402473990333, + "FN": 1570, + "FP": 1065, + "IoU": 0.6449265597628352, + "TN": 889249, + "TP": 4786, + "n_pred": 5851, + "n_ref": 6356 + }, + "2": { + "Dice": 0.9069126012756421, + "FN": 996, + "FP": 1164, + "IoU": 0.8296798612206276, + "TN": 883988, + "TP": 10522, + "n_pred": 11686, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9458839715661546, + "FN": 576, + "FP": 368, + "IoU": 0.8973243419621493, + "TN": 887476, + "TP": 8250, + "n_pred": 8618, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9610377991500783, + "FN": 478, + "FP": 393, + "IoU": 0.9249978472401619, + "TN": 750435, + "TP": 10742, + "n_pred": 11135, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9396193604482659, + "FN": 686, + "FP": 564, + "IoU": 0.8861151603498543, + "TN": 751072, + "TP": 9726, + "n_pred": 10290, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9803156287120313, + "FN": 198, + "FP": 266, + "IoU": 0.9613912464636378, + "TN": 750030, + "TP": 11554, + "n_pred": 11820, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8992860785313616, + "FN": 265, + "FP": 525, + "IoU": 0.8170025480657864, + "TN": 757731, + "TP": 3527, + "n_pred": 4052, + "n_ref": 3792 + }, + "2": { + "Dice": 0.9263946280991735, + "FN": 871, + "FP": 839, + "IoU": 0.8628818859754631, + "TN": 749577, + "TP": 10761, + "n_pred": 11600, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9597399719287878, + "FN": 338, + "FP": 207, + "IoU": 0.9225962221275387, + "TN": 755007, + "TP": 6496, + "n_pred": 6703, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8898334290637565, + "FN": 196, + "FP": 1722, + "IoU": 0.8015314569536424, + "TN": 985664, + "TP": 7746, + "n_pred": 9468, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8792265193370166, + "FN": 791, + "FP": 1395, + "IoU": 0.7844819087055112, + "TN": 985185, + "TP": 7957, + "n_pred": 9352, + "n_ref": 8748 + }, + "3": { + "Dice": 0.976261921031522, + "FN": 116, + "FP": 683, + "IoU": 0.9536247025364212, + "TN": 978099, + "TP": 16430, + "n_pred": 17113, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7272024729520865, + "FN": 419, + "FP": 1699, + "IoU": 0.5713418336369156, + "TN": 990387, + "TP": 2823, + "n_pred": 4522, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8651791152206412, + "FN": 521, + "FP": 1914, + "IoU": 0.762392661982826, + "TN": 985080, + "TP": 7813, + "n_pred": 9727, + "n_ref": 8334 + }, + "3": { + "Dice": 0.93205093953157, + "FN": 148, + "FP": 1378, + "IoU": 0.8727484989993329, + "TN": 983336, + "TP": 10466, + "n_pred": 11844, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9532664885681573, + "FN": 586, + "FP": 761, + "IoU": 0.9107059993370898, + "TN": 742931, + "TP": 13738, + "n_pred": 14499, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9027408349716665, + "FN": 1006, + "FP": 676, + "IoU": 0.8227234401349073, + "TN": 748528, + "TP": 7806, + "n_pred": 8482, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9786002455709525, + "FN": 144, + "FP": 344, + "IoU": 0.9580972007556242, + "TN": 746370, + "TP": 11158, + "n_pred": 11502, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.747486497714998, + "FN": 738, + "FP": 2301, + "IoU": 0.5967891734111715, + "TN": 750479, + "TP": 4498, + "n_pred": 6799, + "n_ref": 5236 + }, + "2": { + "Dice": 0.9139267015706807, + "FN": 604, + "FP": 1040, + "IoU": 0.8414963362900115, + "TN": 747644, + "TP": 8728, + "n_pred": 9768, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9196816208393632, + "FN": 379, + "FP": 287, + "IoU": 0.8513060951105157, + "TN": 753537, + "TP": 3813, + "n_pred": 4100, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9653380647614219, + "FN": 329, + "FP": 218, + "IoU": 0.9329985301322881, + "TN": 630812, + "TP": 7617, + "n_pred": 7835, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8964943113495514, + "FN": 520, + "FP": 599, + "IoU": 0.8124056999161777, + "TN": 633011, + "TP": 4846, + "n_pred": 5445, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9617380474641943, + "FN": 384, + "FP": 169, + "IoU": 0.9262961482073837, + "TN": 631473, + "TP": 6950, + "n_pred": 7119, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9066915075298867, + "FN": 100, + "FP": 501, + "IoU": 0.8293098551547856, + "TN": 635455, + "TP": 2920, + "n_pred": 3421, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9404569892473118, + "FN": 355, + "FP": 531, + "IoU": 0.887606241278701, + "TN": 631093, + "TP": 6997, + "n_pred": 7528, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9285844748858447, + "FN": 214, + "FP": 177, + "IoU": 0.8666893965223321, + "TN": 636043, + "TP": 2542, + "n_pred": 2719, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9557574953568586, + "FN": 1031, + "FP": 303, + "IoU": 0.9152639268246204, + "TN": 967297, + "TP": 14409, + "n_pred": 14712, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8897154921081734, + "FN": 1046, + "FP": 1148, + "IoU": 0.8013400941687794, + "TN": 971996, + "TP": 8850, + "n_pred": 9998, + "n_ref": 9896 + }, + "3": { + "Dice": 0.966750406383922, + "FN": 134, + "FP": 766, + "IoU": 0.9356407322654462, + "TN": 969056, + "TP": 13084, + "n_pred": 13850, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9341811875464531, + "FN": 532, + "FP": 265, + "IoU": 0.8764915543158222, + "TN": 976587, + "TP": 5656, + "n_pred": 5921, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9283049309266915, + "FN": 750, + "FP": 672, + "IoU": 0.8662024840045164, + "TN": 972412, + "TP": 9206, + "n_pred": 9878, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9594739005343198, + "FN": 154, + "FP": 339, + "IoU": 0.9221045978827619, + "TN": 976711, + "TP": 5836, + "n_pred": 6175, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9619035952716359, + "FN": 475, + "FP": 769, + "IoU": 0.9266033394300549, + "TN": 1031627, + "TP": 15705, + "n_pred": 16474, + "n_ref": 16180 + }, + "2": { + "Dice": 0.907018250906788, + "FN": 831, + "FP": 784, + "IoU": 0.8298567214496418, + "TN": 1039084, + "TP": 7877, + "n_pred": 8661, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9698120832491413, + "FN": 261, + "FP": 486, + "IoU": 0.9413933783147654, + "TN": 1035830, + "TP": 11999, + "n_pred": 12485, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9207838807617996, + "FN": 426, + "FP": 435, + "IoU": 0.8531969309462916, + "TN": 1042711, + "TP": 5004, + "n_pred": 5439, + "n_ref": 5430 + }, + "2": { + "Dice": 0.9120484206544354, + "FN": 678, + "FP": 1182, + "IoU": 0.838317107093185, + "TN": 1037072, + "TP": 9644, + "n_pred": 10826, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9535848311277898, + "FN": 252, + "FP": 218, + "IoU": 0.9112872782181956, + "TN": 1043278, + "TP": 4828, + "n_pred": 5046, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8986935923816816, + "FN": 1772, + "FP": 345, + "IoU": 0.8160250282436777, + "TN": 477709, + "TP": 9390, + "n_pred": 9735, + "n_ref": 11162 + }, + "2": { + "Dice": 0.8235086480762442, + "FN": 384, + "FP": 616, + "IoU": 0.6999699969997, + "TN": 485883, + "TP": 2333, + "n_pred": 2949, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9647812166488794, + "FN": 131, + "FP": 199, + "IoU": 0.931958762886598, + "TN": 484366, + "TP": 4520, + "n_pred": 4719, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8393598103141672, + "FN": 1695, + "FP": 202, + "IoU": 0.7231869254341164, + "TN": 482363, + "TP": 4956, + "n_pred": 5158, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8746675011735253, + "FN": 565, + "FP": 236, + "IoU": 0.7772525027808677, + "TN": 485620, + "TP": 2795, + "n_pred": 3031, + "n_ref": 3360 + }, + "3": { + "Dice": 0.9047492703634916, + "FN": 85, + "FP": 274, + "IoU": 0.8260658914728682, + "TN": 487152, + "TP": 1705, + "n_pred": 1979, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9170272333927207, + "FN": 1464, + "FP": 1144, + "IoU": 0.8467685076380729, + "TN": 463460, + "TP": 14412, + "n_pred": 15556, + "n_ref": 15876 + }, + "2": { + "Dice": 0.83426243567753, + "FN": 628, + "FP": 918, + "IoU": 0.7156520139782968, + "TN": 475043, + "TP": 3891, + "n_pred": 4809, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9562837594526468, + "FN": 321, + "FP": 286, + "IoU": 0.916229643941485, + "TN": 473234, + "TP": 6639, + "n_pred": 6925, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.901168298073887, + "FN": 1622, + "FP": 569, + "IoU": 0.8201149425287356, + "TN": 468300, + "TP": 9989, + "n_pred": 10558, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8632350178470787, + "FN": 1067, + "FP": 389, + "IoU": 0.7593786151049413, + "TN": 474429, + "TP": 4595, + "n_pred": 4984, + "n_ref": 5662 + }, + "3": { + "Dice": 0.9043593568705454, + "FN": 78, + "FP": 499, + "IoU": 0.8254160363086233, + "TN": 477175, + "TP": 2728, + "n_pred": 3227, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.905441430139564, + "FN": 3350, + "FP": 268, + "IoU": 0.8272206303724928, + "TN": 623700, + "TP": 17322, + "n_pred": 17590, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8328894429648099, + "FN": 1717, + "FP": 1232, + "IoU": 0.7136337152845212, + "TN": 634342, + "TP": 7349, + "n_pred": 8581, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9636129979805398, + "FN": 876, + "FP": 115, + "IoU": 0.9297810529299227, + "TN": 630527, + "TP": 13122, + "n_pred": 13237, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8355860846443607, + "FN": 4019, + "FP": 433, + "IoU": 0.7176022835394862, + "TN": 628875, + "TP": 11313, + "n_pred": 11746, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8780055794181464, + "FN": 2252, + "FP": 503, + "IoU": 0.7825400584102928, + "TN": 631971, + "TP": 9914, + "n_pred": 10417, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9353350230714239, + "FN": 366, + "FP": 629, + "IoU": 0.8785252105969967, + "TN": 636449, + "TP": 7196, + "n_pred": 7825, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9205852330724736, + "FN": 1760, + "FP": 1741, + "IoU": 0.8528558819820956, + "TN": 540687, + "TP": 20292, + "n_pred": 22033, + "n_ref": 22052 + }, + "2": { + "Dice": 0.8026638626007712, + "FN": 1034, + "FP": 655, + "IoU": 0.6703747072599532, + "TN": 559356, + "TP": 3435, + "n_pred": 4090, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9531469424230818, + "FN": 431, + "FP": 303, + "IoU": 0.9104878048780488, + "TN": 556280, + "TP": 7466, + "n_pred": 7769, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.770309934829113, + "FN": 690, + "FP": 3927, + "IoU": 0.6264260862529331, + "TN": 552121, + "TP": 7742, + "n_pred": 11669, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8747394747811588, + "FN": 666, + "FP": 536, + "IoU": 0.7773661789220226, + "TN": 559081, + "TP": 4197, + "n_pred": 4733, + "n_ref": 4863 + }, + "3": { + "Dice": 0.9486257015397899, + "FN": 156, + "FP": 201, + "IoU": 0.9022721051190802, + "TN": 560827, + "TP": 3296, + "n_pred": 3497, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8896087398373984, + "FN": 572, + "FP": 1166, + "IoU": 0.8011669145406703, + "TN": 410139, + "TP": 7003, + "n_pred": 8169, + "n_ref": 7575 + }, + "2": { + "Dice": 0.647666253614209, + "FN": 1288, + "FP": 418, + "IoU": 0.47892486255345146, + "TN": 415606, + "TP": 1568, + "n_pred": 1986, + "n_ref": 2856 + }, + "3": { + "Dice": 0.8748702571791027, + "FN": 406, + "FP": 679, + "IoU": 0.7775727757277573, + "TN": 414002, + "TP": 3793, + "n_pred": 4472, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7723253328150811, + "FN": 763, + "FP": 1580, + "IoU": 0.6290960899160994, + "TN": 412563, + "TP": 3974, + "n_pred": 5554, + "n_ref": 4737 + }, + "2": { + "Dice": 0.627104377104377, + "FN": 1503, + "FP": 269, + "IoU": 0.45677498467198036, + "TN": 415618, + "TP": 1490, + "n_pred": 1759, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8324229844876556, + "FN": 478, + "FP": 289, + "IoU": 0.7129491017964071, + "TN": 416208, + "TP": 1905, + "n_pred": 2194, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9546741168253502, + "FN": 581, + "FP": 652, + "IoU": 0.9132789421859615, + "TN": 482292, + "TP": 12985, + "n_pred": 13637, + "n_ref": 13566 + }, + "2": { + "Dice": 0.9079552925706772, + "FN": 767, + "FP": 633, + "IoU": 0.831426851294401, + "TN": 488205, + "TP": 6905, + "n_pred": 7538, + "n_ref": 7672 + }, + "3": { + "Dice": 0.968162639048715, + "FN": 200, + "FP": 298, + "IoU": 0.9382899628252788, + "TN": 488440, + "TP": 7572, + "n_pred": 7870, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8387668918918919, + "FN": 3331, + "FP": 487, + "IoU": 0.7223070768783184, + "TN": 482761, + "TP": 9931, + "n_pred": 10418, + "n_ref": 13262 + }, + "2": { + "Dice": 0.9169117647058823, + "FN": 994, + "FP": 362, + "IoU": 0.846571622539036, + "TN": 487672, + "TP": 7482, + "n_pred": 7844, + "n_ref": 8476 + }, + "3": { + "Dice": 0.9398581560283688, + "FN": 87, + "FP": 337, + "IoU": 0.8865400053518866, + "TN": 492773, + "TP": 3313, + "n_pred": 3650, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_006/summary_cross_val.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_006/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..2c34eef40de71e9c866cc96e56433a66a8de6945 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_006/summary_cross_val.json @@ -0,0 +1,5460 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8883711444780492, + "FN": 247.1379310344828, + "FP": 300.93103448275866, + "IoU": 0.8097770842293346, + "TN": 13698.160919540229, + "TP": 2305.4942528735633, + "n_pred": 2606.425287356322, + "n_ref": 2552.632183908046 + }, + "mean": { + "1": { + "Dice": 0.8449035610416237, + "FN": 400.62068965517244, + "FP": 457.44827586206895, + "IoU": 0.7490145289647816, + "TN": 12928.758620689656, + "TP": 2764.896551724138, + "n_pred": 3222.344827586207, + "n_ref": 3165.5172413793102 + }, + "2": { + "Dice": 0.8912769156364253, + "FN": 233.13793103448276, + "FP": 241.72413793103448, + "IoU": 0.8074049440908074, + "TN": 14211.551724137931, + "TP": 1865.3103448275863, + "n_pred": 2107.0344827586205, + "n_ref": 2098.448275862069 + }, + "3": { + "Dice": 0.9289329567560983, + "FN": 107.65517241379311, + "FP": 203.6206896551724, + "IoU": 0.872911779632415, + "TN": 13954.172413793103, + "TP": 2286.2758620689656, + "n_pred": 2489.896551724138, + "n_ref": 2393.9310344827586 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.5894074462506554, + "FN": 72, + "FP": 711, + "IoU": 0.4178438661710037, + "TN": 11455, + "TP": 562, + "n_pred": 1273, + "n_ref": 634 + }, + "2": { + "Dice": 0.8955402574079617, + "FN": 198, + "FP": 151, + "IoU": 0.810840108401084, + "TN": 10955, + "TP": 1496, + "n_pred": 1647, + "n_ref": 1694 + }, + "3": { + "Dice": 0.9749808526933877, + "FN": 93, + "FP": 103, + "IoU": 0.9511830635118307, + "TN": 8785, + "TP": 3819, + "n_pred": 3922, + "n_ref": 3912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8239682153571718, + "FN": 3616, + "FP": 726, + "IoU": 0.700634307777165, + "TN": 49496, + "TP": 10162, + "n_pred": 10888, + "n_ref": 13778 + }, + "2": { + "Dice": 0.7975990396158463, + "FN": 931, + "FP": 1598, + "IoU": 0.6633386581469649, + "TN": 56488, + "TP": 4983, + "n_pred": 6581, + "n_ref": 5914 + }, + "3": { + "Dice": 0.8731857617773453, + "FN": 291, + "FP": 2837, + "IoU": 0.7749154493775635, + "TN": 50103, + "TP": 10769, + "n_pred": 13606, + "n_ref": 11060 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9344337459880788, + "FN": 220, + "FP": 352, + "IoU": 0.8769363166953529, + "TN": 14552, + "TP": 4076, + "n_pred": 4428, + "n_ref": 4296 + }, + "2": { + "Dice": 0.9196631770596267, + "FN": 547, + "FP": 159, + "IoU": 0.8512744891510428, + "TN": 14453, + "TP": 4041, + "n_pred": 4200, + "n_ref": 4588 + }, + "3": { + "Dice": 0.9727249553912822, + "FN": 72, + "FP": 142, + "IoU": 0.9468982630272953, + "TN": 15170, + "TP": 3816, + "n_pred": 3958, + "n_ref": 3888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6311678414936178, + "FN": 59, + "FP": 3813, + "IoU": 0.46109951287404316, + "TN": 12015, + "TP": 3313, + "n_pred": 7126, + "n_ref": 3372 + }, + "2": { + "Dice": 0.8716950527169506, + "FN": 369, + "FP": 422, + "IoU": 0.7725704427832087, + "TN": 15722, + "TP": 2687, + "n_pred": 3109, + "n_ref": 3056 + }, + "3": { + "Dice": 0.9585573088260794, + "FN": 122, + "FP": 117, + "IoU": 0.9204129204129204, + "TN": 16197, + "TP": 2764, + "n_pred": 2881, + "n_ref": 2886 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9547410982131211, + "FN": 548, + "FP": 146, + "IoU": 0.9134015472922385, + "TN": 17586, + "TP": 7320, + "n_pred": 7466, + "n_ref": 7868 + }, + "2": { + "Dice": 0.9084414363602181, + "FN": 238, + "FP": 249, + "IoU": 0.8322425077506028, + "TN": 22697, + "TP": 2416, + "n_pred": 2665, + "n_ref": 2654 + }, + "3": { + "Dice": 0.9739246712725652, + "FN": 94, + "FP": 140, + "IoU": 0.9491746307558645, + "TN": 20996, + "TP": 4370, + "n_pred": 4510, + "n_ref": 4464 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6653050804186877, + "FN": 1299, + "FP": 12, + "IoU": 0.4984697781178271, + "TN": 10186, + "TP": 1303, + "n_pred": 1315, + "n_ref": 2602 + }, + "2": { + "Dice": 0.9551979121357111, + "FN": 66, + "FP": 37, + "IoU": 0.9142381348875936, + "TN": 11599, + "TP": 1098, + "n_pred": 1135, + "n_ref": 1164 + }, + "3": { + "Dice": 0.9904344360302909, + "FN": 13, + "FP": 35, + "IoU": 0.9810501381760758, + "TN": 10267, + "TP": 2485, + "n_pred": 2520, + "n_ref": 2498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8, + "FN": 0, + "FP": 1, + "IoU": 0.6666666666666666, + "TN": 12797, + "TP": 2, + "n_pred": 3, + "n_ref": 2 + }, + "2": { + "Dice": 0.9264931087289433, + "FN": 88, + "FP": 104, + "IoU": 0.8630527817403709, + "TN": 11398, + "TP": 1210, + "n_pred": 1314, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9847131829877402, + "FN": 53, + "FP": 48, + "IoU": 0.969886702444842, + "TN": 9446, + "TP": 3253, + "n_pred": 3301, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9380530973451328, + "FN": 12, + "FP": 2, + "IoU": 0.8833333333333333, + "TN": 12680, + "TP": 106, + "n_pred": 108, + "n_ref": 118 + }, + "2": { + "Dice": 0.8203821656050956, + "FN": 676, + "FP": 170, + "IoU": 0.6954643628509719, + "TN": 10022, + "TP": 1932, + "n_pred": 2102, + "n_ref": 2608 + }, + "3": { + "Dice": 0.9042340541522805, + "FN": 188, + "FP": 339, + "IoU": 0.8252072968490879, + "TN": 9785, + "TP": 2488, + "n_pred": 2827, + "n_ref": 2676 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9287042777433354, + "FN": 194, + "FP": 36, + "IoU": 0.8668981481481481, + "TN": 11072, + "TP": 1498, + "n_pred": 1534, + "n_ref": 1692 + }, + "3": { + "Dice": 0.9274537695590327, + "FN": 58, + "FP": 44, + "IoU": 0.8647214854111406, + "TN": 12046, + "TP": 652, + "n_pred": 696, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.77491601343785, + "FN": 908, + "FP": 97, + "IoU": 0.6325411334552102, + "TN": 16465, + "TP": 1730, + "n_pred": 1827, + "n_ref": 2638 + }, + "2": { + "Dice": 0.8854998212796378, + "FN": 486, + "FP": 475, + "IoU": 0.7945264058156938, + "TN": 14523, + "TP": 3716, + "n_pred": 4191, + "n_ref": 4202 + }, + "3": { + "Dice": 0.9422718808193669, + "FN": 201, + "FP": 16, + "IoU": 0.8908450704225352, + "TN": 17212, + "TP": 1771, + "n_pred": 1787, + "n_ref": 1972 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9518211773087542, + "FN": 470, + "FP": 71, + "IoU": 0.908071367884452, + "TN": 6915, + "TP": 5344, + "n_pred": 5415, + "n_ref": 5814 + }, + "2": { + "Dice": 0.921485660554772, + "FN": 80, + "FP": 87, + "IoU": 0.8544027898866609, + "TN": 11653, + "TP": 980, + "n_pred": 1067, + "n_ref": 1060 + }, + "3": { + "Dice": 0.9573690621193667, + "FN": 56, + "FP": 14, + "IoU": 0.9182242990654206, + "TN": 11944, + "TP": 786, + "n_pred": 800, + "n_ref": 842 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9236453201970444, + "FN": 80, + "FP": 44, + "IoU": 0.8581235697940504, + "TN": 31126, + "TP": 750, + "n_pred": 794, + "n_ref": 830 + }, + "2": { + "Dice": 0.927459507153211, + "FN": 796, + "FP": 355, + "IoU": 0.8647314608062052, + "TN": 23491, + "TP": 7358, + "n_pred": 7713, + "n_ref": 8154 + }, + "3": { + "Dice": 0.8666340986809966, + "FN": 248, + "FP": 298, + "IoU": 0.7646551724137931, + "TN": 29680, + "TP": 1774, + "n_pred": 2072, + "n_ref": 2022 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7653422501966956, + "FN": 375, + "FP": 2011, + "IoU": 0.6198821092878763, + "TN": 19323, + "TP": 3891, + "n_pred": 5902, + "n_ref": 4266 + }, + "2": { + "Dice": 0.8819692825583841, + "FN": 468, + "FP": 654, + "IoU": 0.788859616108393, + "TN": 20286, + "TP": 4192, + "n_pred": 4846, + "n_ref": 4660 + }, + "3": { + "Dice": 0.9724029174058743, + "FN": 204, + "FP": 356, + "IoU": 0.946288125839248, + "TN": 15174, + "TP": 9866, + "n_pred": 10222, + "n_ref": 10070 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7981458069953645, + "FN": 396, + "FP": 83, + "IoU": 0.6640953716690042, + "TN": 24174, + "TP": 947, + "n_pred": 1030, + "n_ref": 1343 + }, + "2": { + "Dice": 0.8197776477472206, + "FN": 273, + "FP": 959, + "IoU": 0.6945959345562717, + "TN": 21566, + "TP": 2802, + "n_pred": 3761, + "n_ref": 3075 + }, + "3": { + "Dice": 0.9470298902762013, + "FN": 284, + "FP": 276, + "IoU": 0.8993891484010061, + "TN": 20034, + "TP": 5006, + "n_pred": 5282, + "n_ref": 5290 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9419548872180451, + "FN": 12, + "FP": 181, + "IoU": 0.8902785673678226, + "TN": 11041, + "TP": 1566, + "n_pred": 1747, + "n_ref": 1578 + }, + "2": { + "Dice": 0.910913140311804, + "FN": 9, + "FP": 71, + "IoU": 0.83640081799591, + "TN": 12311, + "TP": 409, + "n_pred": 480, + "n_ref": 418 + }, + "3": { + "Dice": 0.9635173058933583, + "FN": 39, + "FP": 0, + "IoU": 0.9296028880866426, + "TN": 12246, + "TP": 515, + "n_pred": 515, + "n_ref": 554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8408955223880596, + "FN": 931, + "FP": 135, + "IoU": 0.7254699974246717, + "TN": 8917, + "TP": 2817, + "n_pred": 2952, + "n_ref": 3748 + }, + "2": { + "Dice": 0.9451144474526212, + "FN": 150, + "FP": 73, + "IoU": 0.8959402706486235, + "TN": 10657, + "TP": 1920, + "n_pred": 1993, + "n_ref": 2070 + }, + "3": { + "Dice": 0.967984934086629, + "FN": 23, + "FP": 62, + "IoU": 0.9379562043795621, + "TN": 11430, + "TP": 1285, + "n_pred": 1347, + "n_ref": 1308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.685137677441423, + "FN": 177, + "FP": 1664, + "IoU": 0.5210718002081165, + "TN": 8956, + "TP": 2003, + "n_pred": 3667, + "n_ref": 2180 + }, + "2": { + "Dice": 0.9007880379874722, + "FN": 63, + "FP": 428, + "IoU": 0.819485294117647, + "TN": 10080, + "TP": 2229, + "n_pred": 2657, + "n_ref": 2292 + }, + "3": { + "Dice": 0.8260459263919472, + "FN": 57, + "FP": 496, + "IoU": 0.7036441586280815, + "TN": 10934, + "TP": 1313, + "n_pred": 1809, + "n_ref": 1370 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.969633232548968, + "FN": 170, + "FP": 61, + "IoU": 0.9410563919367185, + "TN": 8881, + "TP": 3688, + "n_pred": 3749, + "n_ref": 3858 + }, + "2": { + "Dice": 0.9418604651162791, + "FN": 29, + "FP": 61, + "IoU": 0.8901098901098901, + "TN": 11981, + "TP": 729, + "n_pred": 790, + "n_ref": 758 + }, + "3": { + "Dice": 0.9774252593044539, + "FN": 29, + "FP": 8, + "IoU": 0.9558472553699284, + "TN": 11962, + "TP": 801, + "n_pred": 809, + "n_ref": 830 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7669633457747153, + "FN": 211, + "FP": 2224, + "IoU": 0.6220117975783918, + "TN": 6358, + "TP": 4007, + "n_pred": 6231, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8676337262012692, + "FN": 122, + "FP": 170, + "IoU": 0.7662129703763011, + "TN": 11551, + "TP": 957, + "n_pred": 1127, + "n_ref": 1079 + }, + "3": { + "Dice": 0.92643391521197, + "FN": 108, + "FP": 10, + "IoU": 0.8629500580720093, + "TN": 11939, + "TP": 743, + "n_pred": 753, + "n_ref": 851 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.7239819004524887, + "FN": 90, + "FP": 154, + "IoU": 0.5673758865248227, + "TN": 5836, + "TP": 320, + "n_pred": 474, + "n_ref": 410 + }, + "3": { + "Dice": 0.7333725721012361, + "FN": 57, + "FP": 396, + "IoU": 0.578996282527881, + "TN": 5324, + "TP": 623, + "n_pred": 1019, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9722001588562351, + "FN": 128, + "FP": 82, + "IoU": 0.9459041731066461, + "TN": 8918, + "TP": 3672, + "n_pred": 3754, + "n_ref": 3800 + }, + "2": { + "Dice": 0.8924302788844621, + "FN": 18, + "FP": 63, + "IoU": 0.8057553956834532, + "TN": 12383, + "TP": 336, + "n_pred": 399, + "n_ref": 354 + }, + "3": { + "Dice": 0.9550748752079867, + "FN": 46, + "FP": 8, + "IoU": 0.9140127388535032, + "TN": 12172, + "TP": 574, + "n_pred": 582, + "n_ref": 620 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9312733084709643, + "FN": 95, + "FP": 34, + "IoU": 0.8713858424725822, + "TN": 5397, + "TP": 874, + "n_pred": 908, + "n_ref": 969 + }, + "3": { + "Dice": 0.9813118358373031, + "FN": 26, + "FP": 25, + "IoU": 0.9633093525179857, + "TN": 5010, + "TP": 1339, + "n_pred": 1364, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9740932642487047, + "FN": 105, + "FP": 245, + "IoU": 0.9494949494949495, + "TN": 5870, + "TP": 6580, + "n_pred": 6825, + "n_ref": 6685 + }, + "2": { + "Dice": 0.9140837411636759, + "FN": 225, + "FP": 91, + "IoU": 0.8417626439659489, + "TN": 10803, + "TP": 1681, + "n_pred": 1772, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9808245445829339, + "FN": 69, + "FP": 51, + "IoU": 0.9623706491063029, + "TN": 9611, + "TP": 3069, + "n_pred": 3120, + "n_ref": 3138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7393019726858877, + "FN": 821, + "FP": 38, + "IoU": 0.5864227250842562, + "TN": 10723, + "TP": 1218, + "n_pred": 1256, + "n_ref": 2039 + }, + "2": { + "Dice": 0.8706666666666667, + "FN": 139, + "FP": 55, + "IoU": 0.7709563164108618, + "TN": 11953, + "TP": 653, + "n_pred": 708, + "n_ref": 792 + }, + "3": { + "Dice": 0.8916562889165629, + "FN": 163, + "FP": 11, + "IoU": 0.8044943820224719, + "TN": 11910, + "TP": 716, + "n_pred": 727, + "n_ref": 879 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9631298162418495, + "FN": 514, + "FP": 108, + "IoU": 0.9288817745254974, + "TN": 10454, + "TP": 8124, + "n_pred": 8232, + "n_ref": 8638 + }, + "2": { + "Dice": 0.9399021663172606, + "FN": 81, + "FP": 91, + "IoU": 0.8866183256427159, + "TN": 17683, + "TP": 1345, + "n_pred": 1436, + "n_ref": 1426 + }, + "3": { + "Dice": 0.8835978835978836, + "FN": 15, + "FP": 29, + "IoU": 0.7914691943127962, + "TN": 18989, + "TP": 167, + "n_pred": 196, + "n_ref": 182 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9080611169652265, + "FN": 287, + "FP": 411, + "IoU": 0.8316043425814234, + "TN": 8655, + "TP": 3447, + "n_pred": 3858, + "n_ref": 3734 + }, + "2": { + "Dice": 0.8835016835016835, + "FN": 70, + "FP": 103, + "IoU": 0.7913148371531966, + "TN": 11971, + "TP": 656, + "n_pred": 759, + "n_ref": 726 + }, + "3": { + "Dice": 0.9295774647887324, + "FN": 57, + "FP": 8, + "IoU": 0.868421052631579, + "TN": 12306, + "TP": 429, + "n_pred": 437, + "n_ref": 486 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.965367377427679, + "FN": 207, + "FP": 48, + "IoU": 0.9330532948280389, + "TN": 8991, + "TP": 3554, + "n_pred": 3602, + "n_ref": 3761 + }, + "2": { + "Dice": 0.8824188129899216, + "FN": 260, + "FP": 160, + "IoU": 0.7895791583166333, + "TN": 10804, + "TP": 1576, + "n_pred": 1736, + "n_ref": 1836 + }, + "3": { + "Dice": 0.818450184501845, + "FN": 456, + "FP": 36, + "IoU": 0.6926920674578388, + "TN": 11199, + "TP": 1109, + "n_pred": 1145, + "n_ref": 1565 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8621096227973423, + "FN": 256.9310344827586, + "FP": 358.6666666666667, + "IoU": 0.7806314300257884, + "TN": 14962.655172413792, + "TP": 2297.609195402299, + "n_pred": 2656.2758620689656, + "n_ref": 2554.5402298850577 + }, + "mean": { + "1": { + "Dice": 0.7934147322715343, + "FN": 434.7241379310345, + "FP": 576.7931034482758, + "IoU": 0.7010047480930988, + "TN": 14050.379310344828, + "TP": 2813.9655172413795, + "n_pred": 3390.7586206896553, + "n_ref": 3248.689655172414 + }, + "2": { + "Dice": 0.873802256930758, + "FN": 240.6551724137931, + "FP": 322.6551724137931, + "IoU": 0.7822721793215369, + "TN": 15322.241379310344, + "TP": 1990.3103448275863, + "n_pred": 2312.9655172413795, + "n_ref": 2230.9655172413795 + }, + "3": { + "Dice": 0.9191118791897346, + "FN": 95.41379310344827, + "FP": 176.55172413793105, + "IoU": 0.8586173626627293, + "TN": 15515.344827586207, + "TP": 2088.551724137931, + "n_pred": 2265.103448275862, + "n_ref": 2183.9655172413795 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.75370256524898, + "FN": 333, + "FP": 4074, + "IoU": 0.6047533632286995, + "TN": 33650, + "TP": 6743, + "n_pred": 10817, + "n_ref": 7076 + }, + "2": { + "Dice": 0.8690290468761608, + "FN": 591, + "FP": 1172, + "IoU": 0.7683920126116658, + "TN": 37188, + "TP": 5849, + "n_pred": 7021, + "n_ref": 6440 + }, + "3": { + "Dice": 0.9635620488738151, + "FN": 534, + "FP": 304, + "IoU": 0.9296861889578788, + "TN": 32882, + "TP": 11080, + "n_pred": 11384, + "n_ref": 11614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9783710295389939, + "FN": 158, + "FP": 17, + "IoU": 0.9576578756351318, + "TN": 8667, + "TP": 3958, + "n_pred": 3975, + "n_ref": 4116 + }, + "2": { + "Dice": 0.9087078651685393, + "FN": 13, + "FP": 117, + "IoU": 0.8326898326898327, + "TN": 12023, + "TP": 647, + "n_pred": 764, + "n_ref": 660 + }, + "3": { + "Dice": 0.9299895506792059, + "FN": 67, + "FP": 0, + "IoU": 0.869140625, + "TN": 12288, + "TP": 445, + "n_pred": 445, + "n_ref": 512 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6823066196374374, + "FN": 3823, + "FP": 50, + "IoU": 0.5178037848605578, + "TN": 11168, + "TP": 4159, + "n_pred": 4209, + "n_ref": 7982 + }, + "2": { + "Dice": 0.8523576397835609, + "FN": 230, + "FP": 343, + "IoU": 0.7427031881454872, + "TN": 16973, + "TP": 1654, + "n_pred": 1997, + "n_ref": 1884 + }, + "3": { + "Dice": 0.9294470171615363, + "FN": 72, + "FP": 187, + "IoU": 0.8681933842239186, + "TN": 17235, + "TP": 1706, + "n_pred": 1893, + "n_ref": 1778 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7004754358161648, + "FN": 669, + "FP": 276, + "IoU": 0.5390243902439025, + "TN": 23550, + "TP": 1105, + "n_pred": 1381, + "n_ref": 1774 + }, + "2": { + "Dice": 0.6253312135665077, + "FN": 142, + "FP": 1272, + "IoU": 0.4548959136468774, + "TN": 23006, + "TP": 1180, + "n_pred": 2452, + "n_ref": 1322 + }, + "3": { + "Dice": 0.7024590163934427, + "FN": 20, + "FP": 1432, + "IoU": 0.5413771320277954, + "TN": 22434, + "TP": 1714, + "n_pred": 3146, + "n_ref": 1734 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8116266070430408, + "FN": 66, + "FP": 608, + "IoU": 0.6829727187206021, + "TN": 10674, + "TP": 1452, + "n_pred": 2060, + "n_ref": 1518 + }, + "2": { + "Dice": 0.8988005997001499, + "FN": 413, + "FP": 127, + "IoU": 0.8162014976174268, + "TN": 9862, + "TP": 2398, + "n_pred": 2525, + "n_ref": 2811 + }, + "3": { + "Dice": 0.7809278350515464, + "FN": 8, + "FP": 162, + "IoU": 0.6405919661733616, + "TN": 12327, + "TP": 303, + "n_pred": 465, + "n_ref": 311 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8642478597635548, + "FN": 324, + "FP": 9, + "IoU": 0.7609475951184493, + "TN": 11407, + "TP": 1060, + "n_pred": 1069, + "n_ref": 1384 + }, + "2": { + "Dice": 0.7643051771117166, + "FN": 40, + "FP": 652, + "IoU": 0.6185226019845645, + "TN": 10986, + "TP": 1122, + "n_pred": 1774, + "n_ref": 1162 + }, + "3": { + "Dice": 0.7376788553259142, + "FN": 26, + "FP": 634, + "IoU": 0.5843828715365239, + "TN": 11212, + "TP": 928, + "n_pred": 1562, + "n_ref": 954 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9061371841155235, + "FN": 32, + "FP": 176, + "IoU": 0.8283828382838284, + "TN": 24388, + "TP": 1004, + "n_pred": 1180, + "n_ref": 1036 + }, + "2": { + "Dice": 0.9362655263693749, + "FN": 81, + "FP": 232, + "IoU": 0.8801684532924962, + "TN": 22988, + "TP": 2299, + "n_pred": 2531, + "n_ref": 2380 + }, + "3": { + "Dice": 0.9519774011299436, + "FN": 48, + "FP": 20, + "IoU": 0.9083557951482479, + "TN": 24858, + "TP": 674, + "n_pred": 694, + "n_ref": 722 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9011320754716982, + "FN": 56, + "FP": 75, + "IoU": 0.820054945054945, + "TN": 24872, + "TP": 597, + "n_pred": 672, + "n_ref": 653 + }, + "2": { + "Dice": 0.9124738522514587, + "FN": 301, + "FP": 494, + "IoU": 0.8390362421542823, + "TN": 20661, + "TP": 4144, + "n_pred": 4638, + "n_ref": 4445 + }, + "3": { + "Dice": 0.7768154563624251, + "FN": 221, + "FP": 114, + "IoU": 0.6350762527233116, + "TN": 24682, + "TP": 583, + "n_pred": 697, + "n_ref": 804 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9052162849872774, + "FN": 255, + "FP": 43, + "IoU": 0.8268448576409064, + "TN": 11079, + "TP": 1423, + "n_pred": 1466, + "n_ref": 1678 + }, + "2": { + "Dice": 0.9438125954846376, + "FN": 392, + "FP": 270, + "IoU": 0.8936033429765349, + "TN": 6578, + "TP": 5560, + "n_pred": 5830, + "n_ref": 5952 + }, + "3": { + "Dice": 0.9622775800711744, + "FN": 128, + "FP": 137, + "IoU": 0.9272976680384087, + "TN": 9155, + "TP": 3380, + "n_pred": 3517, + "n_ref": 3508 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8810674917810868, + "FN": 180, + "FP": 435, + "IoU": 0.7874179052886278, + "TN": 3507, + "TP": 2278, + "n_pred": 2713, + "n_ref": 2458 + }, + "2": { + "Dice": 0.9066487575554063, + "FN": 131, + "FP": 8, + "IoU": 0.8292383292383292, + "TN": 5586, + "TP": 675, + "n_pred": 683, + "n_ref": 806 + }, + "3": { + "Dice": 0.9725888324873097, + "FN": 2, + "FP": 52, + "IoU": 0.9466403162055336, + "TN": 5388, + "TP": 958, + "n_pred": 1010, + "n_ref": 960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7629819408860838, + "FN": 2971, + "FP": 822, + "IoU": 0.6167912709638311, + "TN": 22102, + "TP": 6105, + "n_pred": 6927, + "n_ref": 9076 + }, + "2": { + "Dice": 0.8987811340752517, + "FN": 254, + "FP": 701, + "IoU": 0.8161693936477382, + "TN": 26805, + "TP": 4240, + "n_pred": 4941, + "n_ref": 4494 + }, + "3": { + "Dice": 0.972605376275101, + "FN": 364, + "FP": 63, + "IoU": 0.9466716622954915, + "TN": 23993, + "TP": 7580, + "n_pred": 7643, + "n_ref": 7944 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6974789915966386, + "FN": 165, + "FP": 339, + "IoU": 0.535483870967742, + "TN": 18115, + "TP": 581, + "n_pred": 920, + "n_ref": 746 + }, + "2": { + "Dice": 0.9161451814768461, + "FN": 228, + "FP": 107, + "IoU": 0.8452655889145496, + "TN": 17035, + "TP": 1830, + "n_pred": 1937, + "n_ref": 2058 + }, + "3": { + "Dice": 0.981902417836977, + "FN": 33, + "FP": 92, + "IoU": 0.964448236632537, + "TN": 15684, + "TP": 3391, + "n_pred": 3483, + "n_ref": 3424 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 827, + "IoU": 0.0, + "TN": 11973, + "TP": 0, + "n_pred": 827, + "n_ref": 0 + }, + "2": { + "Dice": 0.7255208333333333, + "FN": 303, + "FP": 751, + "IoU": 0.5692684920310584, + "TN": 10353, + "TP": 1393, + "n_pred": 2144, + "n_ref": 1696 + }, + "3": { + "Dice": 0.922453390975412, + "FN": 35, + "FP": 252, + "IoU": 0.8560682046138415, + "TN": 10806, + "TP": 1707, + "n_pred": 1959, + "n_ref": 1742 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.11123470522803114, + "FN": 136, + "FP": 2261, + "IoU": 0.05889281507656066, + "TN": 16653, + "TP": 150, + "n_pred": 2411, + "n_ref": 286 + }, + "2": { + "Dice": 0.8431214802896219, + "FN": 188, + "FP": 397, + "IoU": 0.7287899860917941, + "TN": 17043, + "TP": 1572, + "n_pred": 1969, + "n_ref": 1760 + }, + "3": { + "Dice": 0.9793602896801449, + "FN": 57, + "FP": 114, + "IoU": 0.9595553453169348, + "TN": 14972, + "TP": 4057, + "n_pred": 4171, + "n_ref": 4114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8225242718446601, + "FN": 406, + "FP": 508, + "IoU": 0.6985488126649076, + "TN": 9768, + "TP": 2118, + "n_pred": 2626, + "n_ref": 2524 + }, + "2": { + "Dice": 0.866199426568971, + "FN": 291, + "FP": 549, + "IoU": 0.7639786456869907, + "TN": 9241, + "TP": 2719, + "n_pred": 3268, + "n_ref": 3010 + }, + "3": { + "Dice": 0.9535086625950393, + "FN": 299, + "FP": 74, + "IoU": 0.9111481657932349, + "TN": 8602, + "TP": 3825, + "n_pred": 3899, + "n_ref": 4124 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9099041533546326, + "FN": 70, + "FP": 71, + "IoU": 0.8347010550996483, + "TN": 5547, + "TP": 712, + "n_pred": 783, + "n_ref": 782 + }, + "3": { + "Dice": 0.9821061894983866, + "FN": 9, + "FP": 52, + "IoU": 0.9648414985590779, + "TN": 4665, + "TP": 1674, + "n_pred": 1726, + "n_ref": 1683 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7203639282847204, + "FN": 78, + "FP": 967, + "IoU": 0.5629443747386031, + "TN": 10409, + "TP": 1346, + "n_pred": 2313, + "n_ref": 1424 + }, + "2": { + "Dice": 0.9364858599907279, + "FN": 58, + "FP": 79, + "IoU": 0.8805579773321709, + "TN": 11653, + "TP": 1010, + "n_pred": 1089, + "n_ref": 1068 + }, + "3": { + "Dice": 0.9790518191841234, + "FN": 18, + "FP": 39, + "IoU": 0.958963282937365, + "TN": 11411, + "TP": 1332, + "n_pred": 1371, + "n_ref": 1350 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9541666666666667, + "FN": 10, + "FP": 34, + "IoU": 0.9123505976095617, + "TN": 12298, + "TP": 458, + "n_pred": 492, + "n_ref": 468 + }, + "2": { + "Dice": 0.9335404798895218, + "FN": 200, + "FP": 185, + "IoU": 0.8753641955325348, + "TN": 9711, + "TP": 2704, + "n_pred": 2889, + "n_ref": 2904 + }, + "3": { + "Dice": 0.957345971563981, + "FN": 48, + "FP": 114, + "IoU": 0.9181818181818182, + "TN": 10820, + "TP": 1818, + "n_pred": 1932, + "n_ref": 1866 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.967239701589361, + "FN": 338, + "FP": 66, + "IoU": 0.9365577889447236, + "TN": 19232, + "TP": 5964, + "n_pred": 6030, + "n_ref": 6302 + }, + "2": { + "Dice": 0.8513717214350317, + "FN": 217, + "FP": 276, + "IoU": 0.7412073490813649, + "TN": 23695, + "TP": 1412, + "n_pred": 1688, + "n_ref": 1629 + }, + "3": { + "Dice": 0.9595580982442297, + "FN": 38, + "FP": 167, + "IoU": 0.9222601441031475, + "TN": 22963, + "TP": 2432, + "n_pred": 2599, + "n_ref": 2470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9363796133567662, + "FN": 143, + "FP": 38, + "IoU": 0.8803701255783212, + "TN": 11287, + "TP": 1332, + "n_pred": 1370, + "n_ref": 1475 + }, + "2": { + "Dice": 0.9304482225656878, + "FN": 72, + "FP": 18, + "IoU": 0.869942196531792, + "TN": 12108, + "TP": 602, + "n_pred": 620, + "n_ref": 674 + }, + "3": { + "Dice": 0.9774848984074684, + "FN": 11, + "FP": 30, + "IoU": 0.9559613319011815, + "TN": 11869, + "TP": 890, + "n_pred": 920, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.816372939169983, + "FN": 258, + "FP": 65, + "IoU": 0.6897214217098944, + "TN": 18159, + "TP": 718, + "n_pred": 783, + "n_ref": 976 + }, + "2": { + "Dice": 0.7912334925540883, + "FN": 1304, + "FP": 182, + "IoU": 0.6545792654579266, + "TN": 14898, + "TP": 2816, + "n_pred": 2998, + "n_ref": 4120 + }, + "3": { + "Dice": 0.9182452642073778, + "FN": 296, + "FP": 32, + "IoU": 0.8488479262672811, + "TN": 17030, + "TP": 1842, + "n_pred": 1874, + "n_ref": 2138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9748934154429181, + "FN": 189, + "FP": 182, + "IoU": 0.9510166358595195, + "TN": 11626, + "TP": 7203, + "n_pred": 7385, + "n_ref": 7392 + }, + "2": { + "Dice": 0.8611481975967957, + "FN": 154, + "FP": 262, + "IoU": 0.7561547479484173, + "TN": 17494, + "TP": 1290, + "n_pred": 1552, + "n_ref": 1444 + }, + "3": { + "Dice": 0.8794871794871795, + "FN": 170, + "FP": 18, + "IoU": 0.7848970251716247, + "TN": 18326, + "TP": 686, + "n_pred": 704, + "n_ref": 856 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9837770382695508, + "FN": 294, + "FP": 174, + "IoU": 0.9680720425706099, + "TN": 10942, + "TP": 14190, + "n_pred": 14364, + "n_ref": 14484 + }, + "2": { + "Dice": 0.9320526503023835, + "FN": 74, + "FP": 117, + "IoU": 0.8727514990006662, + "TN": 24099, + "TP": 1310, + "n_pred": 1427, + "n_ref": 1384 + }, + "3": { + "Dice": 0.9452513966480447, + "FN": 17, + "FP": 32, + "IoU": 0.8961864406779662, + "TN": 25128, + "TP": 423, + "n_pred": 455, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7958515283842795, + "FN": 200, + "FP": 2044, + "IoU": 0.6609247506799637, + "TN": 18982, + "TP": 4374, + "n_pred": 6418, + "n_ref": 4574 + }, + "2": { + "Dice": 0.8614854277655907, + "FN": 425, + "FP": 459, + "IoU": 0.7566749243049821, + "TN": 21967, + "TP": 2749, + "n_pred": 3208, + "n_ref": 3174 + }, + "3": { + "Dice": 0.8906201308818946, + "FN": 123, + "FP": 579, + "IoU": 0.8028089887640449, + "TN": 22040, + "TP": 2858, + "n_pred": 3437, + "n_ref": 2981 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.931597895319856, + "FN": 84, + "FP": 163, + "IoU": 0.8719543805080352, + "TN": 10871, + "TP": 1682, + "n_pred": 1845, + "n_ref": 1766 + }, + "2": { + "Dice": 0.9205340114431023, + "FN": 198, + "FP": 52, + "IoU": 0.8527679623085983, + "TN": 11102, + "TP": 1448, + "n_pred": 1500, + "n_ref": 1646 + }, + "3": { + "Dice": 0.8698517298187809, + "FN": 2, + "FP": 156, + "IoU": 0.7696793002915452, + "TN": 12114, + "TP": 528, + "n_pred": 684, + "n_ref": 530 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7527405602923264, + "FN": 98, + "FP": 1932, + "IoU": 0.603515625, + "TN": 20480, + "TP": 3090, + "n_pred": 5022, + "n_ref": 3188 + }, + "2": { + "Dice": 0.9038208168642952, + "FN": 318, + "FP": 193, + "IoU": 0.8245192307692307, + "TN": 22688, + "TP": 2401, + "n_pred": 2594, + "n_ref": 2719 + }, + "3": { + "Dice": 0.9474021808851828, + "FN": 55, + "FP": 109, + "IoU": 0.9000609384521633, + "TN": 23959, + "TP": 1477, + "n_pred": 1586, + "n_ref": 1532 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9195979899497487, + "FN": 135, + "FP": 377, + "IoU": 0.8511627906976744, + "TN": 2960, + "TP": 2928, + "n_pred": 3305, + "n_ref": 3063 + }, + "2": { + "Dice": 0.9155092592592593, + "FN": 72, + "FP": 74, + "IoU": 0.8441835645677694, + "TN": 5463, + "TP": 791, + "n_pred": 865, + "n_ref": 863 + }, + "3": { + "Dice": 0.9597570235383447, + "FN": 36, + "FP": 17, + "IoU": 0.9226277372262773, + "TN": 5715, + "TP": 632, + "n_pred": 649, + "n_ref": 668 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8907134316460741, + "FN": 1206, + "FP": 165, + "IoU": 0.8029606208680655, + "TN": 5842, + "TP": 5587, + "n_pred": 5752, + "n_ref": 6793 + }, + "2": { + "Dice": 0.8514285714285714, + "FN": 219, + "FP": 197, + "IoU": 0.7412935323383084, + "TN": 11192, + "TP": 1192, + "n_pred": 1389, + "n_ref": 1411 + }, + "3": { + "Dice": 0.951417004048583, + "FN": 30, + "FP": 138, + "IoU": 0.9073359073359073, + "TN": 10987, + "TP": 1645, + "n_pred": 1783, + "n_ref": 1675 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8629121060925863, + "FN": 339.0238095238095, + "FP": 244.30952380952377, + "IoU": 0.7732867085910508, + "TN": 12990.761904761903, + "TP": 2197.3333333333335, + "n_pred": 2441.6428571428573, + "n_ref": 2536.357142857143 + }, + "mean": { + "1": { + "Dice": 0.8492727533024275, + "FN": 462.07142857142856, + "FP": 278.2142857142857, + "IoU": 0.7588561309501526, + "TN": 12222.67857142857, + "TP": 2808.464285714286, + "n_pred": 3086.6785714285716, + "n_ref": 3270.535714285714 + }, + "2": { + "Dice": 0.8487034269825778, + "FN": 359.07142857142856, + "FP": 262.67857142857144, + "IoU": 0.7450953920878896, + "TN": 13101.07142857143, + "TP": 2048.6071428571427, + "n_pred": 2311.285714285714, + "n_ref": 2407.6785714285716 + }, + "3": { + "Dice": 0.8907601379927534, + "FN": 195.92857142857142, + "FP": 192.03571428571428, + "IoU": 0.8159086027351102, + "TN": 13648.535714285714, + "TP": 1734.9285714285713, + "n_pred": 1926.9642857142858, + "n_ref": 1930.857142857143 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8622390891840607, + "FN": 548, + "FP": 178, + "IoU": 0.7578385590393596, + "TN": 16202, + "TP": 2272, + "n_pred": 2450, + "n_ref": 2820 + }, + "2": { + "Dice": 0.8708010335917312, + "FN": 186, + "FP": 214, + "IoU": 0.7711670480549199, + "TN": 17452, + "TP": 1348, + "n_pred": 1562, + "n_ref": 1534 + }, + "3": { + "Dice": 0.9485747869526888, + "FN": 136, + "FP": 39, + "IoU": 0.9021799888205702, + "TN": 17411, + "TP": 1614, + "n_pred": 1653, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.980876728449544, + "FN": 64, + "FP": 66, + "IoU": 0.9624711316397229, + "TN": 15736, + "TP": 3334, + "n_pred": 3400, + "n_ref": 3398 + }, + "2": { + "Dice": 0.8753355204294662, + "FN": 455, + "FP": 381, + "IoU": 0.7783081410766375, + "TN": 15429, + "TP": 2935, + "n_pred": 3316, + "n_ref": 3390 + }, + "3": { + "Dice": 0.9719661573430989, + "FN": 177, + "FP": 267, + "IoU": 0.9454612455472301, + "TN": 11059, + "TP": 7697, + "n_pred": 7964, + "n_ref": 7874 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.975171833356712, + "FN": 120, + "FP": 234, + "IoU": 0.9515466739666028, + "TN": 5494, + "TP": 6952, + "n_pred": 7186, + "n_ref": 7072 + }, + "2": { + "Dice": 0.8752507019655034, + "FN": 123, + "FP": 188, + "IoU": 0.7781740370898717, + "TN": 11398, + "TP": 1091, + "n_pred": 1279, + "n_ref": 1214 + }, + "3": { + "Dice": 0.9727819017320608, + "FN": 122, + "FP": 32, + "IoU": 0.9470061940812113, + "TN": 9894, + "TP": 2752, + "n_pred": 2784, + "n_ref": 2874 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9052279780377178, + "FN": 254, + "FP": 143, + "IoU": 0.8268643698211949, + "TN": 29707, + "TP": 1896, + "n_pred": 2039, + "n_ref": 2150 + }, + "2": { + "Dice": 0.8369704749679076, + "FN": 224, + "FP": 1427, + "IoU": 0.7196467991169978, + "TN": 26111, + "TP": 4238, + "n_pred": 5665, + "n_ref": 4462 + }, + "3": { + "Dice": 0.720558882235529, + "FN": 123, + "FP": 717, + "IoU": 0.5631825273010921, + "TN": 30077, + "TP": 1083, + "n_pred": 1800, + "n_ref": 1206 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9169764560099133, + "FN": 134, + "FP": 0, + "IoU": 0.8466819221967964, + "TN": 5526, + "TP": 740, + "n_pred": 740, + "n_ref": 874 + }, + "2": { + "Dice": 0.9104504183727968, + "FN": 437, + "FP": 66, + "IoU": 0.8356209150326798, + "TN": 3340, + "TP": 2557, + "n_pred": 2623, + "n_ref": 2994 + }, + "3": { + "Dice": 0.9391849529780564, + "FN": 27, + "FP": 70, + "IoU": 0.8853427895981087, + "TN": 5554, + "TP": 749, + "n_pred": 819, + "n_ref": 776 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7387580299785867, + "FN": 914, + "FP": 62, + "IoU": 0.5857385398981324, + "TN": 10444, + "TP": 1380, + "n_pred": 1442, + "n_ref": 2294 + }, + "2": { + "Dice": 0.9535724214623297, + "FN": 125, + "FP": 42, + "IoU": 0.9112646121147715, + "TN": 10918, + "TP": 1715, + "n_pred": 1757, + "n_ref": 1840 + }, + "3": { + "Dice": 0.9387417218543046, + "FN": 11, + "FP": 63, + "IoU": 0.8845553822152886, + "TN": 12159, + "TP": 567, + "n_pred": 630, + "n_ref": 578 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.810518805422485, + "FN": 1720, + "FP": 139, + "IoU": 0.6814053127677806, + "TN": 19765, + "TP": 3976, + "n_pred": 4115, + "n_ref": 5696 + }, + "2": { + "Dice": 0.9321274763135228, + "FN": 475, + "FP": 313, + "IoU": 0.8728827230198419, + "TN": 19401, + "TP": 5411, + "n_pred": 5724, + "n_ref": 5886 + }, + "3": { + "Dice": 0.9278534733080188, + "FN": 566, + "FP": 80, + "IoU": 0.8654166666666666, + "TN": 20800, + "TP": 4154, + "n_pred": 4234, + "n_ref": 4720 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9360397196261683, + "FN": 189, + "FP": 249, + "IoU": 0.8797694208070271, + "TN": 2757, + "TP": 3205, + "n_pred": 3454, + "n_ref": 3394 + }, + "2": { + "Dice": 0.8949640287769784, + "FN": 98, + "FP": 48, + "IoU": 0.8098958333333334, + "TN": 5632, + "TP": 622, + "n_pred": 670, + "n_ref": 720 + }, + "3": { + "Dice": 0.9238578680203046, + "FN": 4, + "FP": 26, + "IoU": 0.8584905660377359, + "TN": 6188, + "TP": 182, + "n_pred": 208, + "n_ref": 186 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8717703349282296, + "FN": 167, + "FP": 101, + "IoU": 0.7726887192536047, + "TN": 24421, + "TP": 911, + "n_pred": 1012, + "n_ref": 1078 + }, + "2": { + "Dice": 0.8729969642239558, + "FN": 2557, + "FP": 748, + "IoU": 0.7746181123840699, + "TN": 10936, + "TP": 11359, + "n_pred": 12107, + "n_ref": 13916 + }, + "3": { + "Dice": 0.7225161669606114, + "FN": 96, + "FP": 1792, + "IoU": 0.5655775425678785, + "TN": 21254, + "TP": 2458, + "n_pred": 4250, + "n_ref": 2554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9798506411159645, + "FN": 71, + "FP": 72, + "IoU": 0.9604972375690608, + "TN": 9180, + "TP": 3477, + "n_pred": 3549, + "n_ref": 3548 + }, + "2": { + "Dice": 0.9276105060858424, + "FN": 70, + "FP": 43, + "IoU": 0.8649940262843488, + "TN": 11963, + "TP": 724, + "n_pred": 767, + "n_ref": 794 + }, + "3": { + "Dice": 0.9764773379231211, + "FN": 33, + "FP": 8, + "IoU": 0.9540358744394619, + "TN": 11908, + "TP": 851, + "n_pred": 859, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9502203785325383, + "FN": 158, + "FP": 226, + "IoU": 0.9051617683378612, + "TN": 15151, + "TP": 3665, + "n_pred": 3891, + "n_ref": 3823 + }, + "2": { + "Dice": 0.9328859060402684, + "FN": 299, + "FP": 341, + "IoU": 0.8742138364779874, + "TN": 14112, + "TP": 4448, + "n_pred": 4789, + "n_ref": 4747 + }, + "3": { + "Dice": 0.9587503051012937, + "FN": 298, + "FP": 40, + "IoU": 0.9207688701359588, + "TN": 14934, + "TP": 3928, + "n_pred": 3968, + "n_ref": 4226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7982022471910112, + "FN": 328, + "FP": 121, + "IoU": 0.6641735228122663, + "TN": 5063, + "TP": 888, + "n_pred": 1009, + "n_ref": 1216 + }, + "2": { + "Dice": 0.8733499821619694, + "FN": 180, + "FP": 175, + "IoU": 0.7751741608613046, + "TN": 4821, + "TP": 1224, + "n_pred": 1399, + "n_ref": 1404 + }, + "3": { + "Dice": 0.92916123424598, + "FN": 141, + "FP": 22, + "IoU": 0.8676948051948052, + "TN": 5168, + "TP": 1069, + "n_pred": 1091, + "n_ref": 1210 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7782740239158623, + "FN": 1467, + "FP": 72, + "IoU": 0.6370283018867925, + "TN": 14960, + "TP": 2701, + "n_pred": 2773, + "n_ref": 4168 + }, + "2": { + "Dice": 0.8436734693877551, + "FN": 251, + "FP": 515, + "IoU": 0.7296152488528063, + "TN": 16367, + "TP": 2067, + "n_pred": 2582, + "n_ref": 2318 + }, + "3": { + "Dice": 0.9359509202453987, + "FN": 147, + "FP": 114, + "IoU": 0.8796125461254612, + "TN": 17032, + "TP": 1907, + "n_pred": 2021, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.34498834498834496, + "FN": 4, + "FP": 558, + "IoU": 0.2084507042253521, + "TN": 5690, + "TP": 148, + "n_pred": 706, + "n_ref": 152 + }, + "2": { + "Dice": 0.7931034482758621, + "FN": 51, + "FP": 201, + "IoU": 0.6571428571428571, + "TN": 5665, + "TP": 483, + "n_pred": 684, + "n_ref": 534 + }, + "3": { + "Dice": 0.6766917293233082, + "FN": 3, + "FP": 298, + "IoU": 0.5113636363636364, + "TN": 5784, + "TP": 315, + "n_pred": 613, + "n_ref": 318 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7321571772253408, + "FN": 17, + "FP": 651, + "IoU": 0.5774826059456041, + "TN": 11219, + "TP": 913, + "n_pred": 1564, + "n_ref": 930 + }, + "2": { + "Dice": 0.8538945331398161, + "FN": 443, + "FP": 161, + "IoU": 0.745040101308569, + "TN": 10431, + "TP": 1765, + "n_pred": 1926, + "n_ref": 2208 + }, + "3": { + "Dice": 0.950469684030743, + "FN": 168, + "FP": 64, + "IoU": 0.9056143205858421, + "TN": 10342, + "TP": 2226, + "n_pred": 2290, + "n_ref": 2394 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9230769230769231, + "FN": 16, + "FP": 142, + "IoU": 0.8571428571428571, + "TN": 11694, + "TP": 948, + "n_pred": 1090, + "n_ref": 964 + }, + "2": { + "Dice": 0.7981427174975562, + "FN": 543, + "FP": 283, + "IoU": 0.6640910939406263, + "TN": 10341, + "TP": 1633, + "n_pred": 1916, + "n_ref": 2176 + }, + "3": { + "Dice": 0.9165705497885429, + "FN": 280, + "FP": 154, + "IoU": 0.8459900638750887, + "TN": 9982, + "TP": 2384, + "n_pred": 2538, + "n_ref": 2664 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8838107499195366, + "FN": 32, + "FP": 329, + "IoU": 0.7918108419838523, + "TN": 11066, + "TP": 1373, + "n_pred": 1702, + "n_ref": 1405 + }, + "2": { + "Dice": 0.8558139534883721, + "FN": 126, + "FP": 122, + "IoU": 0.7479674796747967, + "TN": 11816, + "TP": 736, + "n_pred": 858, + "n_ref": 862 + }, + "3": { + "Dice": 0.9313057157839538, + "FN": 36, + "FP": 95, + "IoU": 0.8714425907752699, + "TN": 11781, + "TP": 888, + "n_pred": 983, + "n_ref": 924 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8979591836734694, + "FN": 592, + "FP": 133, + "IoU": 0.8148148148148148, + "TN": 21685, + "TP": 3190, + "n_pred": 3323, + "n_ref": 3782 + }, + "2": { + "Dice": 0.9281351526965562, + "FN": 137, + "FP": 416, + "IoU": 0.8659068865179438, + "TN": 21476, + "TP": 3571, + "n_pred": 3987, + "n_ref": 3708 + }, + "3": { + "Dice": 0.9304054054054054, + "FN": 155, + "FP": 51, + "IoU": 0.8698673404927353, + "TN": 24017, + "TP": 1377, + "n_pred": 1428, + "n_ref": 1532 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9656144748178899, + "FN": 356, + "FP": 83, + "IoU": 0.9335150689080721, + "TN": 6197, + "TP": 6164, + "n_pred": 6247, + "n_ref": 6520 + }, + "2": { + "Dice": 0.8590857574612769, + "FN": 175, + "FP": 198, + "IoU": 0.7529801324503311, + "TN": 11290, + "TP": 1137, + "n_pred": 1335, + "n_ref": 1312 + }, + "3": { + "Dice": 0.9283842794759826, + "FN": 97, + "FP": 67, + "IoU": 0.8663406682966586, + "TN": 11573, + "TP": 1063, + "n_pred": 1130, + "n_ref": 1160 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9100119189511323, + "FN": 105, + "FP": 197, + "IoU": 0.8348824494259158, + "TN": 10971, + "TP": 1527, + "n_pred": 1724, + "n_ref": 1632 + }, + "2": { + "Dice": 0.7853949329359166, + "FN": 33, + "FP": 255, + "IoU": 0.6466257668711657, + "TN": 11985, + "TP": 527, + "n_pred": 782, + "n_ref": 560 + }, + "3": { + "Dice": 0.5855670103092784, + "FN": 0, + "FP": 603, + "IoU": 0.4139941690962099, + "TN": 11771, + "TP": 426, + "n_pred": 1029, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6624398775688675, + "FN": 61, + "FP": 1483, + "IoU": 0.4952598888525662, + "TN": 16141, + "TP": 1515, + "n_pred": 2998, + "n_ref": 1576 + }, + "2": { + "Dice": 0.9421915444348576, + "FN": 76, + "FP": 58, + "IoU": 0.8907014681892332, + "TN": 17974, + "TP": 1092, + "n_pred": 1150, + "n_ref": 1168 + }, + "3": { + "Dice": 0.9708070978820835, + "FN": 10, + "FP": 41, + "IoU": 0.9432703003337041, + "TN": 18301, + "TP": 848, + "n_pred": 889, + "n_ref": 858 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6579134137686302, + "FN": 977, + "FP": 951, + "IoU": 0.4902168164992068, + "TN": 15418, + "TP": 1854, + "n_pred": 2805, + "n_ref": 2831 + }, + "2": { + "Dice": 0.623336745138178, + "FN": 1250, + "FP": 222, + "IoU": 0.4527881040892193, + "TN": 16510, + "TP": 1218, + "n_pred": 1440, + "n_ref": 2468 + }, + "3": { + "Dice": 0.7593052109181141, + "FN": 2298, + "FP": 127, + "IoU": 0.612, + "TN": 12950, + "TP": 3825, + "n_pred": 3952, + "n_ref": 6123 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7526652452025586, + "FN": 1382, + "FP": 938, + "IoU": 0.6034188034188034, + "TN": 6950, + "TP": 3530, + "n_pred": 4468, + "n_ref": 4912 + }, + "2": { + "Dice": 0.7346938775510204, + "FN": 302, + "FP": 218, + "IoU": 0.5806451612903226, + "TN": 11560, + "TP": 720, + "n_pred": 938, + "n_ref": 1022 + }, + "3": { + "Dice": 0.8742268041237113, + "FN": 20, + "FP": 407, + "IoU": 0.7765567765567766, + "TN": 10889, + "TP": 1484, + "n_pred": 1891, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9833072028036521, + "FN": 266, + "FP": 96, + "IoU": 0.9671625544267054, + "TN": 14576, + "TP": 10662, + "n_pred": 10758, + "n_ref": 10928 + }, + "2": { + "Dice": 0.8165038002171553, + "FN": 382, + "FP": 125, + "IoU": 0.689908256880734, + "TN": 23965, + "TP": 1128, + "n_pred": 1253, + "n_ref": 1510 + }, + "3": { + "Dice": 0.9657320872274143, + "FN": 101, + "FP": 42, + "IoU": 0.9337349397590361, + "TN": 23442, + "TP": 2015, + "n_pred": 2057, + "n_ref": 2116 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7831938289840801, + "FN": 2432, + "FP": 210, + "IoU": 0.6436471540329107, + "TN": 11786, + "TP": 4772, + "n_pred": 4982, + "n_ref": 7204 + }, + "2": { + "Dice": 0.6633333333333333, + "FN": 461, + "FP": 145, + "IoU": 0.49625935162094764, + "TN": 17997, + "TP": 597, + "n_pred": 742, + "n_ref": 1058 + }, + "3": { + "Dice": 0.8404494382022472, + "FN": 206, + "FP": 78, + "IoU": 0.7248062015503876, + "TN": 18168, + "TP": 748, + "n_pred": 826, + "n_ref": 954 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8596546310832025, + "FN": 367, + "FP": 80, + "IoU": 0.7538546255506607, + "TN": 10984, + "TP": 1369, + "n_pred": 1449, + "n_ref": 1736 + }, + "2": { + "Dice": 0.7353177795655672, + "FN": 163, + "FP": 166, + "IoU": 0.5814249363867684, + "TN": 12014, + "TP": 457, + "n_pred": 623, + "n_ref": 620 + }, + "3": { + "Dice": 0.9108327192336035, + "FN": 118, + "FP": 3, + "IoU": 0.8362652232746955, + "TN": 12061, + "TP": 618, + "n_pred": 621, + "n_ref": 736 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9730200174064404, + "FN": 84, + "FP": 40, + "IoU": 0.9474576271186441, + "TN": 4040, + "TP": 2236, + "n_pred": 2276, + "n_ref": 2320 + }, + "2": { + "Dice": 0.900459418070444, + "FN": 34, + "FP": 31, + "IoU": 0.8189415041782729, + "TN": 6041, + "TP": 294, + "n_pred": 325, + "n_ref": 328 + }, + "3": { + "Dice": 0.8979591836734694, + "FN": 5, + "FP": 10, + "IoU": 0.8148148148148148, + "TN": 6319, + "TP": 66, + "n_pred": 76, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9456978372491054, + "FN": 113, + "FP": 236, + "IoU": 0.8969893742621016, + "TN": 9412, + "TP": 3039, + "n_pred": 3275, + "n_ref": 3152 + }, + "2": { + "Dice": 0.8743000579262405, + "FN": 398, + "FP": 253, + "IoU": 0.776672384219554, + "TN": 9885, + "TP": 2264, + "n_pred": 2517, + "n_ref": 2662 + }, + "3": { + "Dice": 0.9362012395187751, + "FN": 108, + "FP": 67, + "IoU": 0.8800548320767649, + "TN": 11341, + "TP": 1284, + "n_pred": 1351, + "n_ref": 1392 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.8890299426627949, + "FN": 156.29885057471265, + "FP": 257.4482758620689, + "IoU": 0.8139033782054274, + "TN": 10981.954022988508, + "TP": 1624.9885057471265, + "n_pred": 1882.4367816091954, + "n_ref": 1781.287356321839 + }, + "mean": { + "1": { + "Dice": 0.8390033075314536, + "FN": 240.44827586206895, + "FP": 373.17241379310343, + "IoU": 0.7481323415375659, + "TN": 10524.827586206897, + "TP": 1882.2413793103449, + "n_pred": 2255.4137931034484, + "n_ref": 2122.689655172414 + }, + "2": { + "Dice": 0.892765823721632, + "FN": 152.27586206896552, + "FP": 255.44827586206895, + "IoU": 0.8081839076869864, + "TN": 11175.48275862069, + "TP": 1437.4827586206898, + "n_pred": 1692.9310344827586, + "n_ref": 1589.7586206896551 + }, + "3": { + "Dice": 0.935320696735299, + "FN": 76.17241379310344, + "FP": 143.72413793103448, + "IoU": 0.8853938853917299, + "TN": 11245.551724137931, + "TP": 1555.2413793103449, + "n_pred": 1698.9655172413793, + "n_ref": 1631.4137931034484 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7894736842105263, + "FN": 1, + "FP": 7, + "IoU": 0.6521739130434783, + "TN": 12777, + "TP": 15, + "n_pred": 22, + "n_ref": 16 + }, + "2": { + "Dice": 0.8627726952850105, + "FN": 124, + "FP": 266, + "IoU": 0.7586633663366337, + "TN": 11184, + "TP": 1226, + "n_pred": 1492, + "n_ref": 1350 + }, + "3": { + "Dice": 0.9565043894652833, + "FN": 216, + "FP": 2, + "IoU": 0.9166347992351817, + "TN": 10185, + "TP": 2397, + "n_pred": 2399, + "n_ref": 2613 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8992497320471597, + "FN": 9, + "FP": 179, + "IoU": 0.8169425511197663, + "TN": 11773, + "TP": 839, + "n_pred": 1018, + "n_ref": 848 + }, + "2": { + "Dice": 0.927536231884058, + "FN": 52, + "FP": 48, + "IoU": 0.8648648648648649, + "TN": 12060, + "TP": 640, + "n_pred": 688, + "n_ref": 692 + }, + "3": { + "Dice": 0.9794786466999446, + "FN": 31, + "FP": 6, + "IoU": 0.9597826086956521, + "TN": 11880, + "TP": 883, + "n_pred": 889, + "n_ref": 914 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8825561312607945, + "FN": 9, + "FP": 399, + "IoU": 0.7897990726429676, + "TN": 10859, + "TP": 1533, + "n_pred": 1932, + "n_ref": 1542 + }, + "2": { + "Dice": 0.8396039603960396, + "FN": 128, + "FP": 115, + "IoU": 0.7235494880546075, + "TN": 11921, + "TP": 636, + "n_pred": 751, + "n_ref": 764 + }, + "3": { + "Dice": 0.9639206253758268, + "FN": 41, + "FP": 79, + "IoU": 0.930354033662217, + "TN": 11077, + "TP": 1603, + "n_pred": 1682, + "n_ref": 1644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7112033195020747, + "FN": 5, + "FP": 2083, + "IoU": 0.5518351577591758, + "TN": 8141, + "TP": 2571, + "n_pred": 4654, + "n_ref": 2576 + }, + "2": { + "Dice": 0.8606760098928277, + "FN": 302, + "FP": 205, + "IoU": 0.7554269175108539, + "TN": 10727, + "TP": 1566, + "n_pred": 1771, + "n_ref": 1868 + }, + "3": { + "Dice": 0.9368907131862494, + "FN": 164, + "FP": 82, + "IoU": 0.8812741312741312, + "TN": 10728, + "TP": 1826, + "n_pred": 1908, + "n_ref": 1990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7137530160122834, + "FN": 2540, + "FP": 70, + "IoU": 0.5549113233287858, + "TN": 13336, + "TP": 3254, + "n_pred": 3324, + "n_ref": 5794 + }, + "2": { + "Dice": 0.8756737333812432, + "FN": 221, + "FP": 471, + "IoU": 0.7788430808565037, + "TN": 16071, + "TP": 2437, + "n_pred": 2908, + "n_ref": 2658 + }, + "3": { + "Dice": 0.9761460277950633, + "FN": 255, + "FP": 90, + "IoU": 0.9534035656401945, + "TN": 11796, + "TP": 7059, + "n_pred": 7149, + "n_ref": 7314 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.986100183582481, + "FN": 64, + "FP": 42, + "IoU": 0.9725814795654423, + "TN": 8934, + "TP": 3760, + "n_pred": 3802, + "n_ref": 3824 + }, + "2": { + "Dice": 0.9256515775034293, + "FN": 190, + "FP": 81, + "IoU": 0.8615934627170582, + "TN": 10842, + "TP": 1687, + "n_pred": 1768, + "n_ref": 1877 + }, + "3": { + "Dice": 0.9833878681097408, + "FN": 19, + "FP": 113, + "IoU": 0.9673186432285219, + "TN": 8761, + "TP": 3907, + "n_pred": 4020, + "n_ref": 3926 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8888888888888888, + "FN": 4, + "FP": 30, + "IoU": 0.8, + "TN": 6230, + "TP": 136, + "n_pred": 166, + "n_ref": 140 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6266625425301577, + "FN": 52, + "FP": 2362, + "IoU": 0.4563063063063063, + "TN": 27560, + "TP": 2026, + "n_pred": 4388, + "n_ref": 2078 + }, + "2": { + "Dice": 0.8187609841827768, + "FN": 1176, + "FP": 2124, + "IoU": 0.6931374372326576, + "TN": 21246, + "TP": 7454, + "n_pred": 9578, + "n_ref": 8630 + }, + "3": { + "Dice": 0.795624480753254, + "FN": 105, + "FP": 1371, + "IoU": 0.6606116348585882, + "TN": 27651, + "TP": 2873, + "n_pred": 4244, + "n_ref": 2978 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9852987175477009, + "FN": 41, + "FP": 6, + "IoU": 0.971023427866831, + "TN": 4778, + "TP": 1575, + "n_pred": 1581, + "n_ref": 1616 + }, + "2": { + "Dice": 0.8499693815064299, + "FN": 32, + "FP": 213, + "IoU": 0.739084132055378, + "TN": 5461, + "TP": 694, + "n_pred": 907, + "n_ref": 726 + }, + "3": { + "Dice": 0.8491171749598716, + "FN": 71, + "FP": 493, + "IoU": 0.7377963737796374, + "TN": 4249, + "TP": 1587, + "n_pred": 2080, + "n_ref": 1658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9250837299488807, + "FN": 188, + "FP": 237, + "IoU": 0.8606100360774024, + "TN": 22551, + "TP": 2624, + "n_pred": 2861, + "n_ref": 2812 + }, + "2": { + "Dice": 0.8767079758500159, + "FN": 348, + "FP": 1204, + "IoU": 0.7804809052333804, + "TN": 18530, + "TP": 5518, + "n_pred": 6722, + "n_ref": 5866 + }, + "3": { + "Dice": 0.6781395348837209, + "FN": 185, + "FP": 1199, + "IoU": 0.5130190007037297, + "TN": 22758, + "TP": 1458, + "n_pred": 2657, + "n_ref": 1643 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8625575628763726, + "FN": 713, + "FP": 63, + "IoU": 0.7583307380878231, + "TN": 3189, + "TP": 2435, + "n_pred": 2498, + "n_ref": 3148 + }, + "2": { + "Dice": 0.9333738971706723, + "FN": 56, + "FP": 163, + "IoU": 0.8750713063320023, + "TN": 4647, + "TP": 1534, + "n_pred": 1697, + "n_ref": 1590 + }, + "3": { + "Dice": 0.9608076009501187, + "FN": 47, + "FP": 19, + "IoU": 0.9245714285714286, + "TN": 5525, + "TP": 809, + "n_pred": 828, + "n_ref": 856 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.49373663305835624, + "FN": 106, + "FP": 1551, + "IoU": 0.327789046653144, + "TN": 23135, + "TP": 808, + "n_pred": 2359, + "n_ref": 914 + }, + "2": { + "Dice": 0.8737734907699983, + "FN": 399, + "FP": 360, + "IoU": 0.7758417011222681, + "TN": 22214, + "TP": 2627, + "n_pred": 2987, + "n_ref": 3026 + }, + "3": { + "Dice": 0.953664700926706, + "FN": 77, + "FP": 198, + "IoU": 0.9114331723027376, + "TN": 22495, + "TP": 2830, + "n_pred": 3028, + "n_ref": 2907 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8665480427046264, + "FN": 574, + "FP": 26, + "IoU": 0.7645211930926217, + "TN": 10252, + "TP": 1948, + "n_pred": 1974, + "n_ref": 2522 + }, + "2": { + "Dice": 0.9239819004524887, + "FN": 23, + "FP": 145, + "IoU": 0.8587047939444912, + "TN": 11611, + "TP": 1021, + "n_pred": 1166, + "n_ref": 1044 + }, + "3": { + "Dice": 0.9315910837817064, + "FN": 84, + "FP": 5, + "IoU": 0.8719424460431655, + "TN": 12105, + "TP": 606, + "n_pred": 611, + "n_ref": 690 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9618811881188118, + "FN": 301, + "FP": 161, + "IoU": 0.9265617548879351, + "TN": 6509, + "TP": 5829, + "n_pred": 5990, + "n_ref": 6130 + }, + "2": { + "Dice": 0.8857479387514723, + "FN": 116, + "FP": 272, + "IoU": 0.7949260042283298, + "TN": 10908, + "TP": 1504, + "n_pred": 1776, + "n_ref": 1620 + }, + "3": { + "Dice": 0.9786780383795309, + "FN": 109, + "FP": 31, + "IoU": 0.9582463465553236, + "TN": 9447, + "TP": 3213, + "n_pred": 3244, + "n_ref": 3322 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9197258932941752, + "FN": 118, + "FP": 210, + "IoU": 0.8513819664703217, + "TN": 10593, + "TP": 1879, + "n_pred": 2089, + "n_ref": 1997 + }, + "2": { + "Dice": 0.9029612756264237, + "FN": 41, + "FP": 172, + "IoU": 0.8230897009966778, + "TN": 11596, + "TP": 991, + "n_pred": 1163, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9102902374670184, + "FN": 116, + "FP": 20, + "IoU": 0.8353510895883777, + "TN": 11974, + "TP": 690, + "n_pred": 710, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8544600938967136, + "FN": 90, + "FP": 158, + "IoU": 0.7459016393442623, + "TN": 5424, + "TP": 728, + "n_pred": 886, + "n_ref": 818 + }, + "2": { + "Dice": 0.892912571132954, + "FN": 144, + "FP": 63, + "IoU": 0.8065420560747664, + "TN": 5330, + "TP": 863, + "n_pred": 926, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9648885887913572, + "FN": 8, + "FP": 96, + "IoU": 0.9321591650358774, + "TN": 4867, + "TP": 1429, + "n_pred": 1525, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.971449577257689, + "FN": 150, + "FP": 83, + "IoU": 0.9444841553490588, + "TN": 2203, + "TP": 3964, + "n_pred": 4047, + "n_ref": 4114 + }, + "2": { + "Dice": 0.9334763948497854, + "FN": 100, + "FP": 24, + "IoU": 0.8752515090543259, + "TN": 5406, + "TP": 870, + "n_pred": 894, + "n_ref": 970 + }, + "3": { + "Dice": 0.9649010848755584, + "FN": 8, + "FP": 47, + "IoU": 0.9321824907521579, + "TN": 5589, + "TP": 756, + "n_pred": 803, + "n_ref": 764 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9145623446290724, + "FN": 624, + "FP": 29, + "IoU": 0.8425747348119575, + "TN": 8652, + "TP": 3495, + "n_pred": 3524, + "n_ref": 4119 + }, + "2": { + "Dice": 0.8475783475783476, + "FN": 32, + "FP": 182, + "IoU": 0.7354758961681088, + "TN": 11991, + "TP": 595, + "n_pred": 777, + "n_ref": 627 + }, + "3": { + "Dice": 0.9668989547038328, + "FN": 7, + "FP": 31, + "IoU": 0.9359190556492412, + "TN": 12207, + "TP": 555, + "n_pred": 586, + "n_ref": 562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8585344255036529, + "FN": 521, + "FP": 118, + "IoU": 0.752133436772692, + "TN": 3822, + "TP": 1939, + "n_pred": 2057, + "n_ref": 2460 + }, + "2": { + "Dice": 0.9497098646034816, + "FN": 55, + "FP": 49, + "IoU": 0.9042357274401474, + "TN": 5314, + "TP": 982, + "n_pred": 1031, + "n_ref": 1037 + }, + "3": { + "Dice": 0.9761444229529336, + "FN": 30, + "FP": 7, + "IoU": 0.9534005037783375, + "TN": 5606, + "TP": 757, + "n_pred": 764, + "n_ref": 787 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient075_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.42950819672131146, + "FN": 62, + "FP": 1330, + "IoU": 0.27348643006263046, + "TN": 17284, + "TP": 524, + "n_pred": 1854, + "n_ref": 586 + }, + "2": { + "Dice": 0.8775889537971322, + "FN": 469, + "FP": 453, + "IoU": 0.7818784007570381, + "TN": 14973, + "TP": 3305, + "n_pred": 3758, + "n_ref": 3774 + }, + "3": { + "Dice": 0.9458440785558421, + "FN": 140, + "FP": 133, + "IoU": 0.8972525404591645, + "TN": 16543, + "TP": 2384, + "n_pred": 2517, + "n_ref": 2524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9526400395696797, + "FN": 260, + "FP": 123, + "IoU": 0.9095631641086187, + "TN": 8565, + "TP": 3852, + "n_pred": 3975, + "n_ref": 4112 + }, + "2": { + "Dice": 0.9601100412654745, + "FN": 15, + "FP": 14, + "IoU": 0.9232804232804233, + "TN": 12422, + "TP": 349, + "n_pred": 363, + "n_ref": 364 + }, + "3": { + "Dice": 0.9764705882352941, + "FN": 2, + "FP": 6, + "IoU": 0.9540229885057471, + "TN": 12626, + "TP": 166, + "n_pred": 172, + "n_ref": 168 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9205962884088835, + "FN": 55, + "FP": 206, + "IoU": 0.8528748590755355, + "TN": 11026, + "TP": 1513, + "n_pred": 1719, + "n_ref": 1568 + }, + "2": { + "Dice": 0.8721515951067402, + "FN": 178, + "FP": 355, + "IoU": 0.7732879625691195, + "TN": 10449, + "TP": 1818, + "n_pred": 2173, + "n_ref": 1996 + }, + "3": { + "Dice": 0.9612403100775194, + "FN": 216, + "FP": 39, + "IoU": 0.9253731343283582, + "TN": 9383, + "TP": 3162, + "n_pred": 3201, + "n_ref": 3378 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9794780846212313, + "FN": 32, + "FP": 49, + "IoU": 0.9597815292949354, + "TN": 4386, + "TP": 1933, + "n_pred": 1982, + "n_ref": 1965 + }, + "2": { + "Dice": 0.8960739030023095, + "FN": 47, + "FP": 178, + "IoU": 0.8117154811715481, + "TN": 5205, + "TP": 970, + "n_pred": 1148, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9779017378245012, + "FN": 92, + "FP": 11, + "IoU": 0.9567590260285475, + "TN": 4018, + "TP": 2279, + "n_pred": 2290, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9477577438742487, + "FN": 421, + "FP": 31, + "IoU": 0.9007029876977153, + "TN": 8248, + "TP": 4100, + "n_pred": 4131, + "n_ref": 4521 + }, + "2": { + "Dice": 0.921994884910486, + "FN": 81, + "FP": 41, + "IoU": 0.8552787663107948, + "TN": 11957, + "TP": 721, + "n_pred": 762, + "n_ref": 802 + }, + "3": { + "Dice": 0.8955380577427822, + "FN": 180, + "FP": 19, + "IoU": 0.8108365019011406, + "TN": 11748, + "TP": 853, + "n_pred": 872, + "n_ref": 1033 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6832622095779991, + "FN": 37, + "FP": 1299, + "IoU": 0.518905293482175, + "TN": 22823, + "TP": 1441, + "n_pred": 2740, + "n_ref": 1478 + }, + "2": { + "Dice": 0.9214690952523141, + "FN": 83, + "FP": 180, + "IoU": 0.85437430786268, + "TN": 23794, + "TP": 1543, + "n_pred": 1723, + "n_ref": 1626 + }, + "3": { + "Dice": 0.9636277751535192, + "FN": 6, + "FP": 71, + "IoU": 0.9298085688240656, + "TN": 24503, + "TP": 1020, + "n_pred": 1091, + "n_ref": 1026 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8732337018335627, + "FN": 484.04597701149424, + "FP": 199.9655172413793, + "IoU": 0.7943987174286323, + "TN": 13836.965517241382, + "TP": 2251.436781609196, + "n_pred": 2451.402298850575, + "n_ref": 2735.4827586206898 + }, + "mean": { + "1": { + "Dice": 0.8272153278074789, + "FN": 698.3793103448276, + "FP": 181.13793103448276, + "IoU": 0.7436431146505698, + "TN": 13366.275862068966, + "TP": 2526.6206896551726, + "n_pred": 2707.7586206896553, + "n_ref": 3225.0 + }, + "2": { + "Dice": 0.8730573225607045, + "FN": 325.2758620689655, + "FP": 311.41379310344826, + "IoU": 0.7800305929430271, + "TN": 14334.862068965518, + "TP": 1800.8620689655172, + "n_pred": 2112.2758620689656, + "n_ref": 2126.137931034483 + }, + "3": { + "Dice": 0.9194284551325048, + "FN": 428.48275862068965, + "FP": 107.34482758620689, + "IoU": 0.8595224446923001, + "TN": 13809.758620689656, + "TP": 2426.8275862068967, + "n_pred": 2534.1724137931033, + "n_ref": 2855.310344827586 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9815789473684211, + "FN": 22, + "FP": 6, + "IoU": 0.9638242894056848, + "TN": 12026, + "TP": 746, + "n_pred": 752, + "n_ref": 768 + }, + "2": { + "Dice": 0.9140216954600241, + "FN": 159, + "FP": 269, + "IoU": 0.8416574176840548, + "TN": 10097, + "TP": 2275, + "n_pred": 2544, + "n_ref": 2434 + }, + "3": { + "Dice": 0.9764375534122818, + "FN": 121, + "FP": 72, + "IoU": 0.9539599236641222, + "TN": 8608, + "TP": 3999, + "n_pred": 4071, + "n_ref": 4120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6342480027787426, + "FN": 1043, + "FP": 10, + "IoU": 0.4643947100712106, + "TN": 10834, + "TP": 913, + "n_pred": 923, + "n_ref": 1956 + }, + "2": { + "Dice": 0.8733108108108109, + "FN": 103, + "FP": 47, + "IoU": 0.775112443778111, + "TN": 12133, + "TP": 517, + "n_pred": 564, + "n_ref": 620 + }, + "3": { + "Dice": 0.924908424908425, + "FN": 51, + "FP": 31, + "IoU": 0.8603066439522998, + "TN": 12213, + "TP": 505, + "n_pred": 536, + "n_ref": 556 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5773584905660377, + "FN": 1240, + "FP": 104, + "IoU": 0.40583554376657827, + "TN": 16938, + "TP": 918, + "n_pred": 1022, + "n_ref": 2158 + }, + "2": { + "Dice": 0.8645034414945919, + "FN": 432, + "FP": 257, + "IoU": 0.7613439556633184, + "TN": 16313, + "TP": 2198, + "n_pred": 2455, + "n_ref": 2630 + }, + "3": { + "Dice": 0.9711923179514538, + "FN": 153, + "FP": 63, + "IoU": 0.9439979258491055, + "TN": 15343, + "TP": 3641, + "n_pred": 3704, + "n_ref": 3794 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9183461065379884, + "FN": 405, + "FP": 458, + "IoU": 0.8490202939118264, + "TN": 13484, + "TP": 4853, + "n_pred": 5311, + "n_ref": 5258 + }, + "2": { + "Dice": 0.8910718183802663, + "FN": 211, + "FP": 288, + "IoU": 0.8035433070866141, + "TN": 16660, + "TP": 2041, + "n_pred": 2329, + "n_ref": 2252 + }, + "3": { + "Dice": 0.9649122807017544, + "FN": 80, + "FP": 160, + "IoU": 0.9322033898305084, + "TN": 15660, + "TP": 3300, + "n_pred": 3460, + "n_ref": 3380 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9518496770405167, + "FN": 10, + "FP": 318, + "IoU": 0.9081232492997199, + "TN": 15630, + "TP": 3242, + "n_pred": 3560, + "n_ref": 3252 + }, + "2": { + "Dice": 0.8134715025906736, + "FN": 390, + "FP": 186, + "IoU": 0.6855895196506551, + "TN": 17368, + "TP": 1256, + "n_pred": 1442, + "n_ref": 1646 + }, + "3": { + "Dice": 0.9786787836420832, + "FN": 154, + "FP": 29, + "IoU": 0.9582477754962354, + "TN": 14817, + "TP": 4200, + "n_pred": 4229, + "n_ref": 4354 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7216776662631311, + "FN": 7002, + "FP": 125, + "IoU": 0.5645506201503024, + "TN": 34833, + "TP": 9240, + "n_pred": 9365, + "n_ref": 16242 + }, + "2": { + "Dice": 0.6765692381408721, + "FN": 1702, + "FP": 998, + "IoU": 0.5112237509051412, + "TN": 45676, + "TP": 2824, + "n_pred": 3822, + "n_ref": 4526 + }, + "3": { + "Dice": 0.81003704951162, + "FN": 4290, + "FP": 222, + "IoU": 0.6807245966600622, + "TN": 37068, + "TP": 9620, + "n_pred": 9842, + "n_ref": 13910 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7026889040163377, + "FN": 3287, + "FP": 207, + "IoU": 0.5416502689229962, + "TN": 43577, + "TP": 4129, + "n_pred": 4336, + "n_ref": 7416 + }, + "2": { + "Dice": 0.734431557952279, + "FN": 2195, + "FP": 1400, + "IoU": 0.5803175344384777, + "TN": 42634, + "TP": 4971, + "n_pred": 6371, + "n_ref": 7166 + }, + "3": { + "Dice": 0.8066011654119348, + "FN": 4068, + "FP": 479, + "IoU": 0.6758856654073705, + "TN": 37171, + "TP": 9482, + "n_pred": 9961, + "n_ref": 13550 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9836765176571002, + "FN": 56, + "FP": 97, + "IoU": 0.9678773882007138, + "TN": 1637, + "TP": 4610, + "n_pred": 4707, + "n_ref": 4666 + }, + "2": { + "Dice": 0.9119170984455959, + "FN": 44, + "FP": 41, + "IoU": 0.8380952380952381, + "TN": 5875, + "TP": 440, + "n_pred": 481, + "n_ref": 484 + }, + "3": { + "Dice": 0.9816232771822359, + "FN": 5, + "FP": 19, + "IoU": 0.9639097744360903, + "TN": 5735, + "TP": 641, + "n_pred": 660, + "n_ref": 646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9497393117831074, + "FN": 329, + "FP": 153, + "IoU": 0.9042891183478952, + "TN": 7764, + "TP": 4554, + "n_pred": 4707, + "n_ref": 4883 + }, + "2": { + "Dice": 0.8883167042162858, + "FN": 159, + "FP": 188, + "IoU": 0.7990735379270412, + "TN": 11073, + "TP": 1380, + "n_pred": 1568, + "n_ref": 1539 + }, + "3": { + "Dice": 0.9717757742061937, + "FN": 97, + "FP": 47, + "IoU": 0.9451010293556996, + "TN": 10177, + "TP": 2479, + "n_pred": 2526, + "n_ref": 2576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9687399291008701, + "FN": 63, + "FP": 34, + "IoU": 0.939375, + "TN": 4800, + "TP": 1503, + "n_pred": 1537, + "n_ref": 1566 + }, + "2": { + "Dice": 0.9278592375366569, + "FN": 13, + "FP": 110, + "IoU": 0.8654266958424508, + "TN": 5486, + "TP": 791, + "n_pred": 901, + "n_ref": 804 + }, + "3": { + "Dice": 0.956390977443609, + "FN": 56, + "FP": 2, + "IoU": 0.9164265129682997, + "TN": 5706, + "TP": 636, + "n_pred": 638, + "n_ref": 692 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9202623403520883, + "FN": 555, + "FP": 138, + "IoU": 0.8523017902813299, + "TN": 20908, + "TP": 3999, + "n_pred": 4137, + "n_ref": 4554 + }, + "2": { + "Dice": 0.9056318888721123, + "FN": 337, + "FP": 288, + "IoU": 0.8275386313465783, + "TN": 21976, + "TP": 2999, + "n_pred": 3287, + "n_ref": 3336 + }, + "3": { + "Dice": 0.955321359655633, + "FN": 168, + "FP": 133, + "IoU": 0.9144643364592213, + "TN": 22081, + "TP": 3218, + "n_pred": 3351, + "n_ref": 3386 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8582766439909297, + "FN": 716, + "FP": 284, + "IoU": 0.7517378351539226, + "TN": 21572, + "TP": 3028, + "n_pred": 3312, + "n_ref": 3744 + }, + "2": { + "Dice": 0.880915171594674, + "FN": 724, + "FP": 1181, + "IoU": 0.7871746173611887, + "TN": 16649, + "TP": 7046, + "n_pred": 8227, + "n_ref": 7770 + }, + "3": { + "Dice": 0.7976339845850511, + "FN": 941, + "FP": 188, + "IoU": 0.663387000596303, + "TN": 22246, + "TP": 2225, + "n_pred": 2413, + "n_ref": 3166 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 219, + "IoU": 0.0, + "TN": 18981, + "TP": 0, + "n_pred": 219, + "n_ref": 0 + }, + "2": { + "Dice": 0.8984088127294981, + "FN": 43, + "FP": 40, + "IoU": 0.8155555555555556, + "TN": 18750, + "TP": 367, + "n_pred": 407, + "n_ref": 410 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9275872178246849, + "FN": 157, + "FP": 90, + "IoU": 0.8649535265172226, + "TN": 4571, + "TP": 1582, + "n_pred": 1672, + "n_ref": 1739 + }, + "3": { + "Dice": 0.9594229035166817, + "FN": 53, + "FP": 37, + "IoU": 0.9220103986135182, + "TN": 5246, + "TP": 1064, + "n_pred": 1101, + "n_ref": 1117 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6716025794124671, + "FN": 186, + "FP": 1189, + "IoU": 0.5055735346997483, + "TN": 16419, + "TP": 1406, + "n_pred": 2595, + "n_ref": 1592 + }, + "2": { + "Dice": 0.8444576877234803, + "FN": 371, + "FP": 151, + "IoU": 0.7307890665291388, + "TN": 17261, + "TP": 1417, + "n_pred": 1568, + "n_ref": 1788 + }, + "3": { + "Dice": 0.8443604284814115, + "FN": 98, + "FP": 149, + "IoU": 0.7306434023991276, + "TN": 18283, + "TP": 670, + "n_pred": 819, + "n_ref": 768 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7700312174817898, + "FN": 356, + "FP": 749, + "IoU": 0.626057529610829, + "TN": 22645, + "TP": 1850, + "n_pred": 2599, + "n_ref": 2206 + }, + "2": { + "Dice": 0.8137478608100399, + "FN": 421, + "FP": 885, + "IoU": 0.6859822072613609, + "TN": 21441, + "TP": 2853, + "n_pred": 3738, + "n_ref": 3274 + }, + "3": { + "Dice": 0.9177139437462597, + "FN": 173, + "FP": 377, + "IoU": 0.8479402820016588, + "TN": 21983, + "TP": 3067, + "n_pred": 3444, + "n_ref": 3240 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9191557148546395, + "FN": 172, + "FP": 31, + "IoU": 0.8504053058216654, + "TN": 11443, + "TP": 1154, + "n_pred": 1185, + "n_ref": 1326 + }, + "2": { + "Dice": 0.8605851979345955, + "FN": 382, + "FP": 428, + "IoU": 0.7552870090634441, + "TN": 9490, + "TP": 2500, + "n_pred": 2928, + "n_ref": 2882 + }, + "3": { + "Dice": 0.8840852130325815, + "FN": 676, + "FP": 64, + "IoU": 0.7922515440763616, + "TN": 9238, + "TP": 2822, + "n_pred": 2886, + "n_ref": 3498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8896961690885072, + "FN": 223, + "FP": 111, + "IoU": 0.801308744794765, + "TN": 11119, + "TP": 1347, + "n_pred": 1458, + "n_ref": 1570 + }, + "2": { + "Dice": 0.8822804314329739, + "FN": 137, + "FP": 627, + "IoU": 0.7893575958092087, + "TN": 9173, + "TP": 2863, + "n_pred": 3490, + "n_ref": 3000 + }, + "3": { + "Dice": 0.9442672741078209, + "FN": 297, + "FP": 70, + "IoU": 0.8944188722669736, + "TN": 9324, + "TP": 3109, + "n_pred": 3179, + "n_ref": 3406 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9731532432883109, + "FN": 150, + "FP": 11, + "IoU": 0.9477102955505035, + "TN": 9721, + "TP": 2918, + "n_pred": 2929, + "n_ref": 3068 + }, + "2": { + "Dice": 0.9365591397849462, + "FN": 96, + "FP": 140, + "IoU": 0.8806875631951466, + "TN": 10822, + "TP": 1742, + "n_pred": 1882, + "n_ref": 1838 + }, + "3": { + "Dice": 0.9801460520310361, + "FN": 113, + "FP": 61, + "IoU": 0.9610651152383084, + "TN": 8331, + "TP": 4295, + "n_pred": 4356, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9665222528554549, + "FN": 158, + "FP": 12, + "IoU": 0.9352134146341463, + "TN": 3776, + "TP": 2454, + "n_pred": 2466, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9554545454545454, + "FN": 13, + "FP": 85, + "IoU": 0.9147084421235857, + "TN": 5251, + "TP": 1051, + "n_pred": 1136, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9887495981999357, + "FN": 28, + "FP": 7, + "IoU": 0.9777495232040686, + "TN": 4827, + "TP": 1538, + "n_pred": 1545, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9650986342943855, + "FN": 10, + "FP": 13, + "IoU": 0.9325513196480938, + "TN": 6059, + "TP": 318, + "n_pred": 331, + "n_ref": 328 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7501500300060012, + "FN": 1237, + "FP": 12, + "IoU": 0.6001920614596671, + "TN": 9676, + "TP": 1875, + "n_pred": 1887, + "n_ref": 3112 + }, + "2": { + "Dice": 0.9021569240387621, + "FN": 133, + "FP": 180, + "IoU": 0.821753986332574, + "TN": 11044, + "TP": 1443, + "n_pred": 1623, + "n_ref": 1576 + }, + "3": { + "Dice": 0.9708556773140592, + "FN": 48, + "FP": 77, + "IoU": 0.9433620299048482, + "TN": 10593, + "TP": 2082, + "n_pred": 2159, + "n_ref": 2130 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8632478632478633, + "FN": 64, + "FP": 0, + "IoU": 0.7593984962406015, + "TN": 6134, + "TP": 202, + "n_pred": 202, + "n_ref": 266 + }, + "2": { + "Dice": 0.8684611477907568, + "FN": 627, + "FP": 150, + "IoU": 0.7675044883303411, + "TN": 3058, + "TP": 2565, + "n_pred": 2715, + "n_ref": 3192 + }, + "3": { + "Dice": 0.9471520845566647, + "FN": 113, + "FP": 67, + "IoU": 0.8996095928611266, + "TN": 4607, + "TP": 1613, + "n_pred": 1680, + "n_ref": 1726 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9645103857566766, + "FN": 374, + "FP": 224, + "IoU": 0.9314534617148097, + "TN": 16876, + "TP": 8126, + "n_pred": 8350, + "n_ref": 8500 + }, + "2": { + "Dice": 0.8418339164058184, + "FN": 375, + "FP": 484, + "IoU": 0.7268680445151033, + "TN": 22455, + "TP": 2286, + "n_pred": 2770, + "n_ref": 2661 + }, + "3": { + "Dice": 0.9419004006868918, + "FN": 382, + "FP": 24, + "IoU": 0.8901812280227211, + "TN": 21903, + "TP": 3291, + "n_pred": 3315, + "n_ref": 3673 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.923005132991134, + "FN": 157, + "FP": 8, + "IoU": 0.8570190641247833, + "TN": 5246, + "TP": 989, + "n_pred": 997, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7760555852485302, + "FN": 65, + "FP": 354, + "IoU": 0.634061135371179, + "TN": 5255, + "TP": 726, + "n_pred": 1080, + "n_ref": 791 + }, + "3": { + "Dice": 0.7518952446588559, + "FN": 218, + "FP": 502, + "IoU": 0.6024295969077857, + "TN": 4589, + "TP": 1091, + "n_pred": 1593, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9802513464991023, + "FN": 37, + "FP": 150, + "IoU": 0.9612676056338029, + "TN": 1572, + "TP": 4641, + "n_pred": 4791, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9472118959107807, + "FN": 27, + "FP": 44, + "IoU": 0.8997175141242938, + "TN": 5692, + "TP": 637, + "n_pred": 681, + "n_ref": 664 + }, + "3": { + "Dice": 0.9757516973811833, + "FN": 13, + "FP": 12, + "IoU": 0.9526515151515151, + "TN": 5872, + "TP": 503, + "n_pred": 515, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8578897338403042, + "FN": 75, + "FP": 523, + "IoU": 0.7511444028297961, + "TN": 3997, + "TP": 1805, + "n_pred": 2328, + "n_ref": 1880 + }, + "2": { + "Dice": 0.8991008991008991, + "FN": 18, + "FP": 83, + "IoU": 0.8166969147005445, + "TN": 5849, + "TP": 450, + "n_pred": 533, + "n_ref": 468 + }, + "3": { + "Dice": 0.7272727272727273, + "FN": 7, + "FP": 194, + "IoU": 0.5714285714285714, + "TN": 5931, + "TP": 268, + "n_pred": 462, + "n_ref": 275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.672057009730026, + "FN": 2326, + "FP": 67, + "IoU": 0.5060887512899896, + "TN": 20755, + "TP": 2452, + "n_pred": 2519, + "n_ref": 4778 + }, + "2": { + "Dice": 0.9366262814538676, + "FN": 99, + "FP": 37, + "IoU": 0.880806310254163, + "TN": 24459, + "TP": 1005, + "n_pred": 1042, + "n_ref": 1104 + }, + "3": { + "Dice": 0.9760536398467433, + "FN": 23, + "FP": 27, + "IoU": 0.9532273152478953, + "TN": 24531, + "TP": 1019, + "n_pred": 1046, + "n_ref": 1042 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2910959/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8751313035728672, + "FN": 296.68752052545153, + "FP": 272.2642036124795, + "IoU": 0.7943994636960466, + "TN": 13294.099507389163, + "TP": 2135.372413793104, + "n_pred": 2407.636617405583, + "n_ref": 2432.059934318555 + }, + "mean": { + "1": { + "Dice": 0.8307619363909036, + "FN": 447.24876847290636, + "FP": 373.35320197044337, + "IoU": 0.7401301728392337, + "TN": 12618.583990147785, + "TP": 2559.2376847290643, + "n_pred": 2932.590886699508, + "n_ref": 3006.48645320197 + }, + "2": { + "Dice": 0.8759211491664194, + "FN": 262.08325123152713, + "FP": 278.78399014778324, + "IoU": 0.7845974032260494, + "TN": 13629.041871921183, + "TP": 1828.5145320197043, + "n_pred": 2107.2985221674876, + "n_ref": 2090.5977832512317 + }, + "3": { + "Dice": 0.9187108251612781, + "FN": 180.7305418719212, + "FP": 164.6554187192118, + "IoU": 0.8584708150228568, + "TN": 13634.672660098522, + "TP": 2018.365024630542, + "n_pred": 2183.020443349754, + "n_ref": 2199.095566502463 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_007/summary.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_007/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..6d9e2830c405667dc616662a00336702c4aa9c99 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_007/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.9006650774900685, + "FN": 853.7199999999999, + "FP": 852.6999999999999, + "IoU": 0.8256596122165143, + "TN": 843381.8266666667, + "TP": 9340.393333333333, + "n_pred": 10193.093333333334, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8855235629799825, + "FN": 943.5, + "FP": 914.66, + "IoU": 0.8019907183002596, + "TN": 843659.92, + "TP": 8910.56, + "n_pred": 9825.22, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8766937651530193, + "FN": 1183.46, + "FP": 1093.82, + "IoU": 0.7839495332820193, + "TN": 843279.32, + "TP": 8872.04, + "n_pred": 9965.86, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9397779043372038, + "FN": 434.2, + "FP": 549.62, + "IoU": 0.8910385850672639, + "TN": 843206.24, + "TP": 10238.58, + "n_pred": 10788.2, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9361739054974617, + "FN": 658, + "FP": 813, + "IoU": 0.8800065258177665, + "TN": 1093661, + "TP": 10788, + "n_pred": 11601, + "n_ref": 11446 + }, + "2": { + "Dice": 0.858647566884348, + "FN": 1228, + "FP": 2798, + "IoU": 0.7523071244001477, + "TN": 1089666, + "TP": 12228, + "n_pred": 15026, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9456085420680796, + "FN": 651, + "FP": 2059, + "IoU": 0.89682872044771, + "TN": 1079653, + "TP": 23557, + "n_pred": 25616, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8807727690892364, + "FN": 91, + "FP": 1205, + "IoU": 0.7869472299852047, + "TN": 1099837, + "TP": 4787, + "n_pred": 5992, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8903286978508217, + "FN": 1895, + "FP": 1575, + "IoU": 0.8023355169467388, + "TN": 1088365, + "TP": 14085, + "n_pred": 15660, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9393597776787352, + "FN": 567, + "FP": 1746, + "IoU": 0.8856535495352976, + "TN": 1085692, + "TP": 17915, + "n_pred": 19661, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.906085204716478, + "FN": 1224, + "FP": 361, + "IoU": 0.828295959267685, + "TN": 900209, + "TP": 7646, + "n_pred": 8007, + "n_ref": 8870 + }, + "2": { + "Dice": 0.9004345220257717, + "FN": 1767, + "FP": 891, + "IoU": 0.8189003202289297, + "TN": 894763, + "TP": 12019, + "n_pred": 12910, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9758881770529995, + "FN": 467, + "FP": 568, + "IoU": 0.9529117379435851, + "TN": 887460, + "TP": 20945, + "n_pred": 21513, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7297017755559386, + "FN": 2745, + "FP": 391, + "IoU": 0.5744334373727779, + "TN": 902071, + "TP": 4233, + "n_pred": 4624, + "n_ref": 6978 + }, + "2": { + "Dice": 0.9014434159662376, + "FN": 1615, + "FP": 1164, + "IoU": 0.82057076446281, + "TN": 893952, + "TP": 12709, + "n_pred": 13873, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9742318059299191, + "FN": 562, + "FP": 394, + "IoU": 0.9497582509985285, + "TN": 890412, + "TP": 18072, + "n_pred": 18466, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9552200938728911, + "FN": 1588, + "FP": 530, + "IoU": 0.9142787761049053, + "TN": 1401052, + "TP": 22590, + "n_pred": 23120, + "n_ref": 24178 + }, + "2": { + "Dice": 0.9008137673425827, + "FN": 1579, + "FP": 1395, + "IoU": 0.819527883973542, + "TN": 1409281, + "TP": 13505, + "n_pred": 14900, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9763587330958052, + "FN": 476, + "FP": 725, + "IoU": 0.953809468866582, + "TN": 1399759, + "TP": 24800, + "n_pred": 25525, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9557828833361284, + "FN": 452, + "FP": 1130, + "IoU": 0.9153104925053533, + "TN": 1407080, + "TP": 17098, + "n_pred": 18228, + "n_ref": 17550 + }, + "2": { + "Dice": 0.9019066403681788, + "FN": 1350, + "FP": 1634, + "IoU": 0.8213387618249312, + "TN": 1409058, + "TP": 13718, + "n_pred": 15352, + "n_ref": 15068 + }, + "3": { + "Dice": 0.972370077522804, + "FN": 687, + "FP": 564, + "IoU": 0.9462259284731774, + "TN": 1402496, + "TP": 22013, + "n_pred": 22577, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9510226049515608, + "FN": 423, + "FP": 487, + "IoU": 0.9066187788609543, + "TN": 752303, + "TP": 8835, + "n_pred": 9322, + "n_ref": 9258 + }, + "2": { + "Dice": 0.876982245403298, + "FN": 1087, + "FP": 1248, + "IoU": 0.7809157440420341, + "TN": 751390, + "TP": 8323, + "n_pred": 9571, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9721926473351287, + "FN": 493, + "FP": 395, + "IoU": 0.9458899518615562, + "TN": 745637, + "TP": 15523, + "n_pred": 15918, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8252834943301134, + "FN": 988, + "FP": 676, + "IoU": 0.7025384340364677, + "TN": 756454, + "TP": 3930, + "n_pred": 4606, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8490785014623277, + "FN": 2093, + "FP": 1158, + "IoU": 0.7377379799935463, + "TN": 749652, + "TP": 9145, + "n_pred": 10303, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9519129519129519, + "FN": 1064, + "FP": 32, + "IoU": 0.9082384460817147, + "TN": 750104, + "TP": 10848, + "n_pred": 10880, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9651881574666522, + "FN": 494, + "FP": 469, + "IoU": 0.9327185076503878, + "TN": 1063959, + "TP": 13350, + "n_pred": 13819, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8801066174586089, + "FN": 1285, + "FP": 1054, + "IoU": 0.7858842914683266, + "TN": 1067348, + "TP": 8585, + "n_pred": 9639, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9726342640086506, + "FN": 864, + "FP": 123, + "IoU": 0.9467263993091164, + "TN": 1059745, + "TP": 17540, + "n_pred": 17663, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9577694560824589, + "FN": 380, + "FP": 759, + "IoU": 0.9189612237637851, + "TN": 1064217, + "TP": 12916, + "n_pred": 13675, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8753338837356126, + "FN": 1788, + "FP": 779, + "IoU": 0.7783055531565766, + "TN": 1066693, + "TP": 9012, + "n_pred": 9791, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9639949698854987, + "FN": 661, + "FP": 427, + "IoU": 0.9304925573372517, + "TN": 1062619, + "TP": 14565, + "n_pred": 14992, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9474680022259321, + "FN": 619, + "FP": 325, + "IoU": 0.9001797610235804, + "TN": 1096463, + "TP": 8513, + "n_pred": 8838, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8725758276892012, + "FN": 1111, + "FP": 1918, + "IoU": 0.773955223880597, + "TN": 1092520, + "TP": 10371, + "n_pred": 12289, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9116932907348243, + "FN": 795, + "FP": 1278, + "IoU": 0.8377172381399718, + "TN": 1093146, + "TP": 10701, + "n_pred": 11979, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8765474552957359, + "FN": 503, + "FP": 215, + "IoU": 0.7802265074992347, + "TN": 1102653, + "TP": 2549, + "n_pred": 2764, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8782248965776608, + "FN": 676, + "FP": 2562, + "IoU": 0.7828885610835457, + "TN": 1091006, + "TP": 11676, + "n_pred": 14238, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7862647019061781, + "FN": 372, + "FP": 1209, + "IoU": 0.6478057473824905, + "TN": 1101431, + "TP": 2908, + "n_pred": 4117, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8932935742267438, + "FN": 1525, + "FP": 300, + "IoU": 0.8071639898562976, + "TN": 1137416, + "TP": 7639, + "n_pred": 7939, + "n_ref": 9164 + }, + "2": { + "Dice": 0.919855817163893, + "FN": 1425, + "FP": 1710, + "IoU": 0.8516046577676797, + "TN": 1125754, + "TP": 17991, + "n_pred": 19701, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9370690407611068, + "FN": 1194, + "FP": 248, + "IoU": 0.8815897520118247, + "TN": 1134702, + "TP": 10736, + "n_pred": 10984, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.70361328125, + "FN": 1025, + "FP": 189, + "IoU": 0.5427495291902071, + "TN": 1144225, + "TP": 1441, + "n_pred": 1630, + "n_ref": 2466 + }, + "2": { + "Dice": 0.853071790878286, + "FN": 4170, + "FP": 2811, + "IoU": 0.7437883069695747, + "TN": 1119633, + "TP": 20266, + "n_pred": 23077, + "n_ref": 24436 + }, + "3": { + "Dice": 0.6090145510469656, + "FN": 142, + "FP": 3163, + "IoU": 0.43782956285082497, + "TN": 1141001, + "TP": 2574, + "n_pred": 5737, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.954105048444671, + "FN": 620, + "FP": 460, + "IoU": 0.9122379327157484, + "TN": 788494, + "TP": 11226, + "n_pred": 11686, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8850838887612044, + "FN": 932, + "FP": 1068, + "IoU": 0.7938569367140795, + "TN": 791098, + "TP": 7702, + "n_pred": 8770, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9553354291476363, + "FN": 600, + "FP": 153, + "IoU": 0.9144901203724733, + "TN": 791994, + "TP": 8053, + "n_pred": 8206, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.849102377486657, + "FN": 439, + "FP": 805, + "IoU": 0.7377740303541316, + "TN": 796056, + "TP": 3500, + "n_pred": 4305, + "n_ref": 3939 + }, + "2": { + "Dice": 0.9170358437374144, + "FN": 1267, + "FP": 793, + "IoU": 0.8467831907772406, + "TN": 787355, + "TP": 11385, + "n_pred": 12178, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8947546531302877, + "FN": 202, + "FP": 420, + "IoU": 0.8095529699938763, + "TN": 797534, + "TP": 2644, + "n_pred": 3064, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9506879171774962, + "FN": 234, + "FP": 1214, + "IoU": 0.9060106452031675, + "TN": 1332434, + "TP": 13958, + "n_pred": 15172, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8925456174265642, + "FN": 1141, + "FP": 1138, + "IoU": 0.8059434604904632, + "TN": 1336096, + "TP": 9465, + "n_pred": 10603, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9746098839060826, + "FN": 496, + "FP": 381, + "IoU": 0.9504771585069739, + "TN": 1330131, + "TP": 16832, + "n_pred": 17213, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.782941498086386, + "FN": 140, + "FP": 3036, + "IoU": 0.6433063791554358, + "TN": 1338936, + "TP": 5728, + "n_pred": 8764, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8857119382137869, + "FN": 1334, + "FP": 1448, + "IoU": 0.7948680135673205, + "TN": 1334278, + "TP": 10780, + "n_pred": 12228, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9587571348869147, + "FN": 448, + "FP": 513, + "IoU": 0.9207814689638117, + "TN": 1335709, + "TP": 11170, + "n_pred": 11683, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8532909242057325, + "FN": 658, + "FP": 3401, + "IoU": 0.7441215406921767, + "TN": 836105, + "TP": 11804, + "n_pred": 15205, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8702394767380526, + "FN": 1199, + "FP": 1261, + "IoU": 0.770286674759548, + "TN": 841259, + "TP": 8249, + "n_pred": 9510, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9740679392836777, + "FN": 552, + "FP": 403, + "IoU": 0.9494468265311524, + "TN": 833077, + "TP": 17936, + "n_pred": 18339, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.904941838927169, + "FN": 831, + "FP": 452, + "IoU": 0.8263870094722598, + "TN": 844578, + "TP": 6107, + "n_pred": 6559, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8845650309241118, + "FN": 1495, + "FP": 1062, + "IoU": 0.7930225028330905, + "TN": 839614, + "TP": 9797, + "n_pred": 10859, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9632605756229476, + "FN": 529, + "FP": 422, + "IoU": 0.9291250558950663, + "TN": 838550, + "TP": 12467, + "n_pred": 12889, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7696557166814639, + "FN": 1955, + "FP": 380, + "IoU": 0.6255612572161642, + "TN": 845732, + "TP": 3901, + "n_pred": 4281, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8740338608759661, + "FN": 1221, + "FP": 1517, + "IoU": 0.7762523494320503, + "TN": 839731, + "TP": 9499, + "n_pred": 11016, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9456312238997752, + "FN": 1181, + "FP": 173, + "IoU": 0.8968695254779496, + "TN": 838839, + "TP": 11775, + "n_pred": 11948, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9105652277605533, + "FN": 195, + "FP": 180, + "IoU": 0.8358143607705779, + "TN": 849684, + "TP": 1909, + "n_pred": 2089, + "n_ref": 2104 + }, + "2": { + "Dice": 0.9037405284047628, + "FN": 1315, + "FP": 1086, + "IoU": 0.8243856056173201, + "TN": 838296, + "TP": 11271, + "n_pred": 12357, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9450020072260137, + "FN": 507, + "FP": 452, + "IoU": 0.895738203957382, + "TN": 842770, + "TP": 8239, + "n_pred": 8691, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9130505576813482, + "FN": 1873, + "FP": 263, + "IoU": 0.8400119841210396, + "TN": 783689, + "TP": 11215, + "n_pred": 11478, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8570797681479437, + "FN": 1091, + "FP": 1498, + "IoU": 0.7499034003091191, + "TN": 786688, + "TP": 7763, + "n_pred": 9261, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9577782795213367, + "FN": 732, + "FP": 390, + "IoU": 0.9189774696707106, + "TN": 783192, + "TP": 12726, + "n_pred": 13116, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.826849273835503, + "FN": 2174, + "FP": 127, + "IoU": 0.7048107761385504, + "TN": 789245, + "TP": 5494, + "n_pred": 5621, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8828343414832511, + "FN": 938, + "FP": 1367, + "IoU": 0.7902447902447902, + "TN": 786051, + "TP": 8684, + "n_pred": 10051, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9457881567973311, + "FN": 527, + "FP": 448, + "IoU": 0.8971518987341772, + "TN": 787560, + "TP": 8505, + "n_pred": 8953, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9278071675748777, + "FN": 805, + "FP": 1010, + "IoU": 0.8653361032794183, + "TN": 883192, + "TP": 11663, + "n_pred": 12673, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8755694078158714, + "FN": 1208, + "FP": 1387, + "IoU": 0.7786780383795309, + "TN": 884945, + "TP": 9130, + "n_pred": 10517, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9493009802346135, + "FN": 437, + "FP": 825, + "IoU": 0.9034946853253805, + "TN": 883593, + "TP": 11815, + "n_pred": 12640, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7869989515283491, + "FN": 1477, + "FP": 1164, + "IoU": 0.6488031914893617, + "TN": 889150, + "TP": 4879, + "n_pred": 6043, + "n_ref": 6356 + }, + "2": { + "Dice": 0.909673230902402, + "FN": 1009, + "FP": 1078, + "IoU": 0.8343124801524293, + "TN": 884074, + "TP": 10509, + "n_pred": 11587, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9520291008298284, + "FN": 451, + "FP": 393, + "IoU": 0.9084499403406009, + "TN": 887451, + "TP": 8375, + "n_pred": 8768, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9690381788212233, + "FN": 344, + "FP": 351, + "IoU": 0.939936047014087, + "TN": 750477, + "TP": 10876, + "n_pred": 11227, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9390077821011673, + "FN": 759, + "FP": 495, + "IoU": 0.8850279636930412, + "TN": 751141, + "TP": 9653, + "n_pred": 10148, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9781677900716436, + "FN": 215, + "FP": 300, + "IoU": 0.9572685031530036, + "TN": 749996, + "TP": 11537, + "n_pred": 11837, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9040506329113924, + "FN": 221, + "FP": 537, + "IoU": 0.824901824901825, + "TN": 757719, + "TP": 3571, + "n_pred": 4108, + "n_ref": 3792 + }, + "2": { + "Dice": 0.924076224889233, + "FN": 891, + "FP": 874, + "IoU": 0.8588677434831281, + "TN": 749542, + "TP": 10741, + "n_pred": 11615, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9600709849157054, + "FN": 342, + "FP": 198, + "IoU": 0.9232081911262798, + "TN": 755016, + "TP": 6492, + "n_pred": 6690, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8658978216056605, + "FN": 171, + "FP": 2236, + "IoU": 0.7635095303595991, + "TN": 985150, + "TP": 7771, + "n_pred": 10007, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8807887323943662, + "FN": 931, + "FP": 1185, + "IoU": 0.7869727172052754, + "TN": 985395, + "TP": 7817, + "n_pred": 9002, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9739156180606958, + "FN": 99, + "FP": 782, + "IoU": 0.949157433056325, + "TN": 978000, + "TP": 16447, + "n_pred": 17229, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7282622780873397, + "FN": 432, + "FP": 1665, + "IoU": 0.5726513144487467, + "TN": 990421, + "TP": 2810, + "n_pred": 4475, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8569182389937107, + "FN": 704, + "FP": 1844, + "IoU": 0.749656121045392, + "TN": 985150, + "TP": 7630, + "n_pred": 9474, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9277342028730061, + "FN": 87, + "FP": 1553, + "IoU": 0.8652091723514425, + "TN": 983161, + "TP": 10527, + "n_pred": 12080, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9631189247991017, + "FN": 601, + "FP": 450, + "IoU": 0.9288615134696088, + "TN": 743242, + "TP": 13723, + "n_pred": 14173, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9000634334813448, + "FN": 1008, + "FP": 725, + "IoU": 0.8182866729579532, + "TN": 748479, + "TP": 7804, + "n_pred": 8529, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9780316344463972, + "FN": 172, + "FP": 328, + "IoU": 0.9570077386070507, + "TN": 746386, + "TP": 11130, + "n_pred": 11458, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7780441856482274, + "FN": 693, + "FP": 1899, + "IoU": 0.6367203924316749, + "TN": 750881, + "TP": 4543, + "n_pred": 6442, + "n_ref": 5236 + }, + "2": { + "Dice": 0.9142349126660391, + "FN": 591, + "FP": 1049, + "IoU": 0.8420190733070032, + "TN": 747635, + "TP": 8741, + "n_pred": 9790, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9228369134765391, + "FN": 347, + "FP": 296, + "IoU": 0.856729055258467, + "TN": 753528, + "TP": 3845, + "n_pred": 4141, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9683464168143834, + "FN": 298, + "FP": 202, + "IoU": 0.9386352479135984, + "TN": 630828, + "TP": 7648, + "n_pred": 7850, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8978990047917434, + "FN": 494, + "FP": 614, + "IoU": 0.8147157190635451, + "TN": 632996, + "TP": 4872, + "n_pred": 5486, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9619041010339324, + "FN": 403, + "FP": 146, + "IoU": 0.9266042780748663, + "TN": 631496, + "TP": 6931, + "n_pred": 7077, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9256356948664641, + "FN": 126, + "FP": 339, + "IoU": 0.8615659422447157, + "TN": 635617, + "TP": 2894, + "n_pred": 3233, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9430511665434008, + "FN": 339, + "FP": 508, + "IoU": 0.8922391857506361, + "TN": 631116, + "TP": 7013, + "n_pred": 7521, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9335517931913344, + "FN": 192, + "FP": 173, + "IoU": 0.8753840901331512, + "TN": 636047, + "TP": 2564, + "n_pred": 2737, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9576735189010196, + "FN": 835, + "FP": 456, + "IoU": 0.9187845998993458, + "TN": 967144, + "TP": 14605, + "n_pred": 15061, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8896990859607682, + "FN": 1233, + "FP": 915, + "IoU": 0.8013134770141522, + "TN": 972229, + "TP": 8663, + "n_pred": 9578, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9702691695360806, + "FN": 115, + "FP": 688, + "IoU": 0.9422551416654681, + "TN": 969134, + "TP": 13103, + "n_pred": 13791, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9452289609011509, + "FN": 398, + "FP": 273, + "IoU": 0.896146107413713, + "TN": 976579, + "TP": 5790, + "n_pred": 6063, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9272496831432193, + "FN": 811, + "FP": 624, + "IoU": 0.8643667296786389, + "TN": 972460, + "TP": 9145, + "n_pred": 9769, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9566919500856373, + "FN": 125, + "FP": 406, + "IoU": 0.9169793621013134, + "TN": 976644, + "TP": 5865, + "n_pred": 6271, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9647752484575874, + "FN": 308, + "FP": 851, + "IoU": 0.9319476249192649, + "TN": 1031545, + "TP": 15872, + "n_pred": 16723, + "n_ref": 16180 + }, + "2": { + "Dice": 0.9039697108765489, + "FN": 829, + "FP": 845, + "IoU": 0.8247670888726054, + "TN": 1039023, + "TP": 7879, + "n_pred": 8724, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9692152511599758, + "FN": 249, + "FP": 514, + "IoU": 0.9402692970095506, + "TN": 1035802, + "TP": 12011, + "n_pred": 12525, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9182424916573971, + "FN": 477, + "FP": 405, + "IoU": 0.8488431876606684, + "TN": 1042741, + "TP": 4953, + "n_pred": 5358, + "n_ref": 5430 + }, + "2": { + "Dice": 0.9118230791040545, + "FN": 674, + "FP": 1192, + "IoU": 0.8379364252214695, + "TN": 1037062, + "TP": 9648, + "n_pred": 10840, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9525024533856722, + "FN": 227, + "FP": 257, + "IoU": 0.9093123477609144, + "TN": 1043239, + "TP": 4853, + "n_pred": 5110, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9195595371407241, + "FN": 1308, + "FP": 416, + "IoU": 0.8510969079288305, + "TN": 477638, + "TP": 9854, + "n_pred": 10270, + "n_ref": 11162 + }, + "2": { + "Dice": 0.8366678792288105, + "FN": 417, + "FP": 481, + "IoU": 0.7191994996873046, + "TN": 486018, + "TP": 2300, + "n_pred": 2781, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9667595968260776, + "FN": 143, + "FP": 167, + "IoU": 0.9356579493565795, + "TN": 484398, + "TP": 4508, + "n_pred": 4675, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8494641661085064, + "FN": 1578, + "FP": 220, + "IoU": 0.7383204773686508, + "TN": 482345, + "TP": 5073, + "n_pred": 5293, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8703498496121577, + "FN": 611, + "FP": 208, + "IoU": 0.7704596412556054, + "TN": 485648, + "TP": 2749, + "n_pred": 2957, + "n_ref": 3360 + }, + "3": { + "Dice": 0.9106566200215285, + "FN": 98, + "FP": 234, + "IoU": 0.8359683794466403, + "TN": 487192, + "TP": 1692, + "n_pred": 1926, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9185203777491922, + "FN": 1238, + "FP": 1359, + "IoU": 0.8493182477516681, + "TN": 463245, + "TP": 14638, + "n_pred": 15997, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8295847750865052, + "FN": 683, + "FP": 893, + "IoU": 0.7087952697708795, + "TN": 475068, + "TP": 3836, + "n_pred": 4729, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9532387059586426, + "FN": 345, + "FP": 304, + "IoU": 0.9106552863436124, + "TN": 473216, + "TP": 6615, + "n_pred": 6919, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9161621072170416, + "FN": 1246, + "FP": 651, + "IoU": 0.8452944054803457, + "TN": 468218, + "TP": 10365, + "n_pred": 11016, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8655146506386175, + "FN": 1054, + "FP": 378, + "IoU": 0.7629139072847683, + "TN": 474440, + "TP": 4608, + "n_pred": 4986, + "n_ref": 5662 + }, + "3": { + "Dice": 0.907661425225828, + "FN": 93, + "FP": 459, + "IoU": 0.8309341500765697, + "TN": 477215, + "TP": 2713, + "n_pred": 3172, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9196944673823286, + "FN": 2852, + "FP": 260, + "IoU": 0.8513281100707052, + "TN": 623708, + "TP": 17820, + "n_pred": 18080, + "n_ref": 20672 + }, + "2": { + "Dice": 0.836503188667532, + "FN": 1655, + "FP": 1242, + "IoU": 0.7189561505626698, + "TN": 634332, + "TP": 7411, + "n_pred": 8653, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9621919823464509, + "FN": 917, + "FP": 111, + "IoU": 0.9271387057906301, + "TN": 630531, + "TP": 13081, + "n_pred": 13192, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8403033426594021, + "FN": 3919, + "FP": 419, + "IoU": 0.7245889149895245, + "TN": 628889, + "TP": 11413, + "n_pred": 11832, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8805732484076433, + "FN": 2212, + "FP": 488, + "IoU": 0.786628733997155, + "TN": 631986, + "TP": 9954, + "n_pred": 10442, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9336901187834487, + "FN": 409, + "FP": 607, + "IoU": 0.8756273717713307, + "TN": 636471, + "TP": 7153, + "n_pred": 7760, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9230228625392572, + "FN": 1038, + "FP": 2467, + "IoU": 0.8570496349769566, + "TN": 539961, + "TP": 21014, + "n_pred": 23481, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7951891639420832, + "FN": 1064, + "FP": 690, + "IoU": 0.6600116301608839, + "TN": 559321, + "TP": 3405, + "n_pred": 4095, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9577518638883579, + "FN": 382, + "FP": 281, + "IoU": 0.9189288334556126, + "TN": 556302, + "TP": 7515, + "n_pred": 7796, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7477882523567803, + "FN": 698, + "FP": 4519, + "IoU": 0.5971739634005097, + "TN": 551529, + "TP": 7734, + "n_pred": 12253, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8801320404373839, + "FN": 597, + "FP": 565, + "IoU": 0.7859248341930729, + "TN": 559052, + "TP": 4266, + "n_pred": 4831, + "n_ref": 4863 + }, + "3": { + "Dice": 0.939562794684955, + "FN": 164, + "FP": 259, + "IoU": 0.8860145513338723, + "TN": 560769, + "TP": 3288, + "n_pred": 3547, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8613633611817412, + "FN": 461, + "FP": 1829, + "IoU": 0.7564866014461931, + "TN": 409476, + "TP": 7114, + "n_pred": 8943, + "n_ref": 7575 + }, + "2": { + "Dice": 0.6730053741215378, + "FN": 1228, + "FP": 354, + "IoU": 0.5071651090342679, + "TN": 415670, + "TP": 1628, + "n_pred": 1982, + "n_ref": 2856 + }, + "3": { + "Dice": 0.8985838282320694, + "FN": 265, + "FP": 623, + "IoU": 0.8158440481128163, + "TN": 414058, + "TP": 3934, + "n_pred": 4557, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7736225596529284, + "FN": 279, + "FP": 2330, + "IoU": 0.6308193009763691, + "TN": 411813, + "TP": 4458, + "n_pred": 6788, + "n_ref": 4737 + }, + "2": { + "Dice": 0.6466916354556804, + "FN": 1439, + "FP": 259, + "IoU": 0.477859778597786, + "TN": 415628, + "TP": 1554, + "n_pred": 1813, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8664466446644664, + "FN": 414, + "FP": 193, + "IoU": 0.7643633540372671, + "TN": 416304, + "TP": 1969, + "n_pred": 2162, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9630677695544914, + "FN": 293, + "FP": 725, + "IoU": 0.9287663564481142, + "TN": 482219, + "TP": 13273, + "n_pred": 13998, + "n_ref": 13566 + }, + "2": { + "Dice": 0.9146680800318007, + "FN": 769, + "FP": 519, + "IoU": 0.842754242461238, + "TN": 488319, + "TP": 6903, + "n_pred": 7422, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9700476947535771, + "FN": 145, + "FP": 326, + "IoU": 0.9418374907384539, + "TN": 488412, + "TP": 7627, + "n_pred": 7953, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8413758346982487, + "FN": 3245, + "FP": 532, + "IoU": 0.7261852979556329, + "TN": 482716, + "TP": 10017, + "n_pred": 10549, + "n_ref": 13262 + }, + "2": { + "Dice": 0.9201101928374655, + "FN": 961, + "FP": 344, + "IoU": 0.8520408163265306, + "TN": 487690, + "TP": 7515, + "n_pred": 7859, + "n_ref": 8476 + }, + "3": { + "Dice": 0.9325031838120843, + "FN": 105, + "FP": 372, + "IoU": 0.873541887592789, + "TN": 492738, + "TP": 3295, + "n_pred": 3667, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_007/summary_cross_val.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_007/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..0e7a37b0dc928f2721020884723caf0c764f8765 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_007/summary_cross_val.json @@ -0,0 +1,5532 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8735747145319609, + "FN": 275.1111111111111, + "FP": 339.7, + "IoU": 0.7907537961079729, + "TN": 13406.666666666666, + "TP": 2618.5222222222224, + "n_pred": 2958.2222222222226, + "n_ref": 2893.6333333333337 + }, + "mean": { + "1": { + "Dice": 0.8308811563257231, + "FN": 406.23333333333335, + "FP": 312.6333333333333, + "IoU": 0.7354301382678864, + "TN": 13351.966666666667, + "TP": 2569.1666666666665, + "n_pred": 2881.8, + "n_ref": 2975.4 + }, + "2": { + "Dice": 0.8829718323861604, + "FN": 309.8, + "FP": 421.0, + "IoU": 0.7948907968675406, + "TN": 13150.3, + "TP": 2758.9, + "n_pred": 3179.9, + "n_ref": 3068.7 + }, + "3": { + "Dice": 0.9068711548839989, + "FN": 109.3, + "FP": 285.46666666666664, + "IoU": 0.8419404531884919, + "TN": 13717.733333333334, + "TP": 2527.5, + "n_pred": 2812.9666666666667, + "n_ref": 2636.8 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8899521531100478, + "FN": 402, + "FP": 196, + "IoU": 0.8017241379310345, + "TN": 16184, + "TP": 2418, + "n_pred": 2614, + "n_ref": 2820 + }, + "2": { + "Dice": 0.8779704560051381, + "FN": 167, + "FP": 213, + "IoU": 0.7824842587292501, + "TN": 17453, + "TP": 1367, + "n_pred": 1580, + "n_ref": 1534 + }, + "3": { + "Dice": 0.9478617457527827, + "FN": 132, + "FP": 46, + "IoU": 0.9008908685968819, + "TN": 17404, + "TP": 1618, + "n_pred": 1664, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8135254101640657, + "FN": 1728, + "FP": 136, + "IoU": 0.6856661045531197, + "TN": 13270, + "TP": 4066, + "n_pred": 4202, + "n_ref": 5794 + }, + "2": { + "Dice": 0.8829981718464351, + "FN": 243, + "FP": 397, + "IoU": 0.79050736497545, + "TN": 16145, + "TP": 2415, + "n_pred": 2812, + "n_ref": 2658 + }, + "3": { + "Dice": 0.9836065573770492, + "FN": 174, + "FP": 64, + "IoU": 0.967741935483871, + "TN": 11822, + "TP": 7140, + "n_pred": 7204, + "n_ref": 7314 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9438305709023941, + "FN": 693, + "FP": 161, + "IoU": 0.8936355710549259, + "TN": 17571, + "TP": 7175, + "n_pred": 7336, + "n_ref": 7868 + }, + "2": { + "Dice": 0.9061913696060038, + "FN": 239, + "FP": 261, + "IoU": 0.8284734133790738, + "TN": 22685, + "TP": 2415, + "n_pred": 2676, + "n_ref": 2654 + }, + "3": { + "Dice": 0.9725736034926676, + "FN": 120, + "FP": 125, + "IoU": 0.9466114621921987, + "TN": 21011, + "TP": 4344, + "n_pred": 4469, + "n_ref": 4464 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9632210607820364, + "FN": 188, + "FP": 192, + "IoU": 0.9290515309932785, + "TN": 7444, + "TP": 4976, + "n_pred": 5168, + "n_ref": 5164 + }, + "2": { + "Dice": 0.837738918259455, + "FN": 162, + "FP": 237, + "IoU": 0.7207837648705389, + "TN": 11371, + "TP": 1030, + "n_pred": 1267, + "n_ref": 1192 + }, + "3": { + "Dice": 0.9601016518424397, + "FN": 41, + "FP": 116, + "IoU": 0.9232649071358748, + "TN": 10754, + "TP": 1889, + "n_pred": 2005, + "n_ref": 1930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9097222222222222, + "FN": 325, + "FP": 65, + "IoU": 0.8343949044585988, + "TN": 10445, + "TP": 1965, + "n_pred": 2030, + "n_ref": 2290 + }, + "2": { + "Dice": 0.9201336167628302, + "FN": 221, + "FP": 42, + "IoU": 0.8520809898762655, + "TN": 11022, + "TP": 1515, + "n_pred": 1557, + "n_ref": 1736 + }, + "3": { + "Dice": 0.9692551505546751, + "FN": 1, + "FP": 96, + "IoU": 0.9403444034440345, + "TN": 11174, + "TP": 1529, + "n_pred": 1625, + "n_ref": 1530 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5502082369273484, + "FN": 961, + "FP": 983, + "IoU": 0.3795084583466326, + "TN": 28867, + "TP": 1189, + "n_pred": 2172, + "n_ref": 2150 + }, + "2": { + "Dice": 0.8139031114612052, + "FN": 329, + "FP": 1561, + "IoU": 0.6862028889257845, + "TN": 25977, + "TP": 4133, + "n_pred": 5694, + "n_ref": 4462 + }, + "3": { + "Dice": 0.6563467492260062, + "FN": 146, + "FP": 964, + "IoU": 0.48847926267281105, + "TN": 29830, + "TP": 1060, + "n_pred": 2024, + "n_ref": 1206 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.592946802151823, + "FN": 1302, + "FP": 60, + "IoU": 0.421410365335599, + "TN": 10446, + "TP": 992, + "n_pred": 1052, + "n_ref": 2294 + }, + "2": { + "Dice": 0.9449308105055069, + "FN": 167, + "FP": 28, + "IoU": 0.895610278372591, + "TN": 10932, + "TP": 1673, + "n_pred": 1701, + "n_ref": 1840 + }, + "3": { + "Dice": 0.939799331103679, + "FN": 16, + "FP": 56, + "IoU": 0.886435331230284, + "TN": 12166, + "TP": 562, + "n_pred": 618, + "n_ref": 578 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.929270776219942, + "FN": 496, + "FP": 407, + "IoU": 0.8678858814923189, + "TN": 25165, + "TP": 5932, + "n_pred": 6339, + "n_ref": 6428 + }, + "2": { + "Dice": 0.9376511006489375, + "FN": 717, + "FP": 263, + "IoU": 0.8826206731345071, + "TN": 23651, + "TP": 7369, + "n_pred": 7632, + "n_ref": 8086 + }, + "3": { + "Dice": 0.9695749118895203, + "FN": 152, + "FP": 271, + "IoU": 0.9409465307831913, + "TN": 24837, + "TP": 6740, + "n_pred": 7011, + "n_ref": 6892 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.782433521353747, + "FN": 136, + "FP": 944, + "IoU": 0.642620780939775, + "TN": 28978, + "TP": 1942, + "n_pred": 2886, + "n_ref": 2078 + }, + "2": { + "Dice": 0.8297453830182494, + "FN": 1037, + "FP": 2079, + "IoU": 0.7090297880287608, + "TN": 21291, + "TP": 7593, + "n_pred": 9672, + "n_ref": 8630 + }, + "3": { + "Dice": 0.7974348250383382, + "FN": 118, + "FP": 1335, + "IoU": 0.6631115233016461, + "TN": 27687, + "TP": 2860, + "n_pred": 4195, + "n_ref": 2978 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8711316397228638, + "FN": 135, + "FP": 144, + "IoU": 0.7716857610474632, + "TN": 24378, + "TP": 943, + "n_pred": 1087, + "n_ref": 1078 + }, + "2": { + "Dice": 0.9140281442392261, + "FN": 1445, + "FP": 901, + "IoU": 0.8416683539177972, + "TN": 10783, + "TP": 12471, + "n_pred": 13372, + "n_ref": 13916 + }, + "3": { + "Dice": 0.840295685061028, + "FN": 110, + "FP": 819, + "IoU": 0.7245775274236584, + "TN": 22227, + "TP": 2444, + "n_pred": 3263, + "n_ref": 2554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.931560807483998, + "FN": 90, + "FP": 49, + "IoU": 0.871889400921659, + "TN": 24515, + "TP": 946, + "n_pred": 995, + "n_ref": 1036 + }, + "2": { + "Dice": 0.8317997791682002, + "FN": 120, + "FP": 794, + "IoU": 0.7120352867044738, + "TN": 22426, + "TP": 2260, + "n_pred": 3054, + "n_ref": 2380 + }, + "3": { + "Dice": 0.7276967930029155, + "FN": 98, + "FP": 369, + "IoU": 0.5719523373052245, + "TN": 24509, + "TP": 624, + "n_pred": 993, + "n_ref": 722 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9377777777777778, + "FN": 236, + "FP": 240, + "IoU": 0.8828451882845189, + "TN": 15137, + "TP": 3587, + "n_pred": 3827, + "n_ref": 3823 + }, + "2": { + "Dice": 0.9080874548928041, + "FN": 469, + "FP": 397, + "IoU": 0.8316485225505443, + "TN": 14056, + "TP": 4278, + "n_pred": 4675, + "n_ref": 4747 + }, + "3": { + "Dice": 0.9515396883817936, + "FN": 348, + "FP": 47, + "IoU": 0.9075590919728528, + "TN": 14927, + "TP": 3878, + "n_pred": 3925, + "n_ref": 4226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8452280996361601, + "FN": 314, + "FP": 239, + "IoU": 0.7319437712069802, + "TN": 17137, + "TP": 1510, + "n_pred": 1749, + "n_ref": 1824 + }, + "2": { + "Dice": 0.9093135949731083, + "FN": 1336, + "FP": 367, + "IoU": 0.8337076457377209, + "TN": 8959, + "TP": 8538, + "n_pred": 8905, + "n_ref": 9874 + }, + "3": { + "Dice": 0.9335568059379864, + "FN": 277, + "FP": 278, + "IoU": 0.8753929052537045, + "TN": 14746, + "TP": 3899, + "n_pred": 4177, + "n_ref": 4176 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8501273190251001, + "FN": 121, + "FP": 703, + "IoU": 0.7393229990509332, + "TN": 3239, + "TP": 2337, + "n_pred": 3040, + "n_ref": 2458 + }, + "2": { + "Dice": 0.8976588628762542, + "FN": 135, + "FP": 18, + "IoU": 0.8143203883495146, + "TN": 5576, + "TP": 671, + "n_pred": 689, + "n_ref": 806 + }, + "3": { + "Dice": 0.9681978798586572, + "FN": 1, + "FP": 62, + "IoU": 0.9383561643835616, + "TN": 5378, + "TP": 959, + "n_pred": 1021, + "n_ref": 960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7705455629533936, + "FN": 389, + "FP": 1920, + "IoU": 0.6267377950210152, + "TN": 19414, + "TP": 3877, + "n_pred": 5797, + "n_ref": 4266 + }, + "2": { + "Dice": 0.8697394789579158, + "FN": 537, + "FP": 698, + "IoU": 0.7695035460992907, + "TN": 20242, + "TP": 4123, + "n_pred": 4821, + "n_ref": 4660 + }, + "3": { + "Dice": 0.9728429013406669, + "FN": 165, + "FP": 388, + "IoU": 0.9471218206157965, + "TN": 15142, + "TP": 9905, + "n_pred": 10293, + "n_ref": 10070 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.41225626740947074, + "FN": 4, + "FP": 418, + "IoU": 0.2596491228070175, + "TN": 12230, + "TP": 148, + "n_pred": 566, + "n_ref": 152 + }, + "2": { + "Dice": 0.6705539358600583, + "FN": 231, + "FP": 786, + "IoU": 0.5043859649122807, + "TN": 10748, + "TP": 1035, + "n_pred": 1821, + "n_ref": 1266 + }, + "3": { + "Dice": 0.7004303210857332, + "FN": 2, + "FP": 1808, + "IoU": 0.5389709628120224, + "TN": 8874, + "TP": 2116, + "n_pred": 3924, + "n_ref": 2118 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8635451505016722, + "FN": 279, + "FP": 129, + "IoU": 0.7598587404355504, + "TN": 11101, + "TP": 1291, + "n_pred": 1420, + "n_ref": 1570 + }, + "2": { + "Dice": 0.825164594001463, + "FN": 180, + "FP": 1015, + "IoU": 0.7023661270236613, + "TN": 8785, + "TP": 2820, + "n_pred": 3835, + "n_ref": 3000 + }, + "3": { + "Dice": 0.8334709606385907, + "FN": 378, + "FP": 832, + "IoU": 0.7144879660217084, + "TN": 8562, + "TP": 3028, + "n_pred": 3860, + "n_ref": 3406 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.826850009046499, + "FN": 371, + "FP": 586, + "IoU": 0.7048118445404071, + "TN": 15958, + "TP": 2285, + "n_pred": 2871, + "n_ref": 2656 + }, + "2": { + "Dice": 0.9000940733772342, + "FN": 308, + "FP": 754, + "IoU": 0.8183373246664386, + "TN": 13354, + "TP": 4784, + "n_pred": 5538, + "n_ref": 5092 + }, + "3": { + "Dice": 0.9629686539643516, + "FN": 379, + "FP": 103, + "IoU": 0.9285820121499482, + "TN": 12451, + "TP": 6267, + "n_pred": 6370, + "n_ref": 6646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6588516746411484, + "FN": 528, + "FP": 898, + "IoU": 0.4912593649661077, + "TN": 29197, + "TP": 1377, + "n_pred": 2275, + "n_ref": 1905 + }, + "2": { + "Dice": 0.8192272903475901, + "FN": 309, + "FP": 1090, + "IoU": 0.6938060844823812, + "TN": 27431, + "TP": 3170, + "n_pred": 4260, + "n_ref": 3479 + }, + "3": { + "Dice": 0.9455635716293451, + "FN": 244, + "FP": 337, + "IoU": 0.896747822996268, + "TN": 26373, + "TP": 5046, + "n_pred": 5383, + "n_ref": 5290 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8587117839121401, + "FN": 855, + "FP": 97, + "IoU": 0.752405721716515, + "TN": 8955, + "TP": 2893, + "n_pred": 2990, + "n_ref": 3748 + }, + "2": { + "Dice": 0.9477575160177427, + "FN": 147, + "FP": 65, + "IoU": 0.9007025761124122, + "TN": 10665, + "TP": 1923, + "n_pred": 1988, + "n_ref": 2070 + }, + "3": { + "Dice": 0.9712121212121212, + "FN": 26, + "FP": 50, + "IoU": 0.9440353460972017, + "TN": 11442, + "TP": 1282, + "n_pred": 1332, + "n_ref": 1308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.961629746835443, + "FN": 181, + "FP": 13, + "IoU": 0.9260952380952381, + "TN": 3775, + "TP": 2431, + "n_pred": 2444, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9589293954776188, + "FN": 25, + "FP": 64, + "IoU": 0.9210992907801419, + "TN": 5272, + "TP": 1039, + "n_pred": 1103, + "n_ref": 1064 + }, + "3": { + "Dice": 0.98816, + "FN": 22, + "FP": 15, + "IoU": 0.9765970904490828, + "TN": 4819, + "TP": 1544, + "n_pred": 1559, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.93625, + "FN": 69, + "FP": 33, + "IoU": 0.8801410105757932, + "TN": 5549, + "TP": 749, + "n_pred": 782, + "n_ref": 818 + }, + "2": { + "Dice": 0.8947092718700891, + "FN": 153, + "FP": 48, + "IoU": 0.809478672985782, + "TN": 5345, + "TP": 854, + "n_pred": 902, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9575392845202273, + "FN": 5, + "FP": 122, + "IoU": 0.9185375240538807, + "TN": 4841, + "TP": 1432, + "n_pred": 1554, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9791316862556968, + "FN": 32, + "FP": 142, + "IoU": 0.9591165413533834, + "TN": 2144, + "TP": 4082, + "n_pred": 4224, + "n_ref": 4114 + }, + "2": { + "Dice": 0.9268558951965066, + "FN": 121, + "FP": 13, + "IoU": 0.8636826042726348, + "TN": 5417, + "TP": 849, + "n_pred": 862, + "n_ref": 970 + }, + "3": { + "Dice": 0.9741935483870968, + "FN": 9, + "FP": 31, + "IoU": 0.949685534591195, + "TN": 5605, + "TP": 755, + "n_pred": 786, + "n_ref": 764 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9774804905239688, + "FN": 109, + "FP": 194, + "IoU": 0.955952900130833, + "TN": 5921, + "TP": 6576, + "n_pred": 6770, + "n_ref": 6685 + }, + "2": { + "Dice": 0.9216317767042405, + "FN": 189, + "FP": 103, + "IoU": 0.8546540567446491, + "TN": 10791, + "TP": 1717, + "n_pred": 1820, + "n_ref": 1906 + }, + "3": { + "Dice": 0.9815438934360455, + "FN": 80, + "FP": 35, + "IoU": 0.9637566971320517, + "TN": 9627, + "TP": 3058, + "n_pred": 3093, + "n_ref": 3138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5879931389365352, + "FN": 1182, + "FP": 19, + "IoU": 0.4164237123420797, + "TN": 10742, + "TP": 857, + "n_pred": 876, + "n_ref": 2039 + }, + "2": { + "Dice": 0.8915360501567398, + "FN": 81, + "FP": 92, + "IoU": 0.8042986425339367, + "TN": 11916, + "TP": 711, + "n_pred": 803, + "n_ref": 792 + }, + "3": { + "Dice": 0.9691075514874142, + "FN": 32, + "FP": 22, + "IoU": 0.9400665926748057, + "TN": 11899, + "TP": 847, + "n_pred": 869, + "n_ref": 879 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9731606355988783, + "FN": 104, + "FP": 298, + "IoU": 0.9477243172951886, + "TN": 11510, + "TP": 7288, + "n_pred": 7586, + "n_ref": 7392 + }, + "2": { + "Dice": 0.8556876061120543, + "FN": 184, + "FP": 241, + "IoU": 0.7477744807121661, + "TN": 17515, + "TP": 1260, + "n_pred": 1501, + "n_ref": 1444 + }, + "3": { + "Dice": 0.8739495798319328, + "FN": 180, + "FP": 15, + "IoU": 0.7761194029850746, + "TN": 18329, + "TP": 676, + "n_pred": 691, + "n_ref": 856 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9758620689655172, + "FN": 56, + "FP": 56, + "IoU": 0.9528619528619529, + "TN": 4024, + "TP": 2264, + "n_pred": 2320, + "n_ref": 2320 + }, + "2": { + "Dice": 0.9265367316341829, + "FN": 19, + "FP": 30, + "IoU": 0.8631284916201117, + "TN": 6042, + "TP": 309, + "n_pred": 339, + "n_ref": 328 + }, + "3": { + "Dice": 0.8823529411764706, + "FN": 11, + "FP": 5, + "IoU": 0.7894736842105263, + "TN": 6324, + "TP": 60, + "n_pred": 65, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6714677640603567, + "FN": 901, + "FP": 57, + "IoU": 0.5054207537429014, + "TN": 4463, + "TP": 979, + "n_pred": 1036, + "n_ref": 1880 + }, + "2": { + "Dice": 0.9026369168356998, + "FN": 23, + "FP": 73, + "IoU": 0.822550831792976, + "TN": 5859, + "TP": 445, + "n_pred": 518, + "n_ref": 468 + }, + "3": { + "Dice": 0.7612156295224313, + "FN": 12, + "FP": 153, + "IoU": 0.6144859813084113, + "TN": 5972, + "TP": 263, + "n_pred": 416, + "n_ref": 275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.8841389840881031, + "FN": 407.0, + "FP": 346.6206896551724, + "IoU": 0.8021668285465631, + "TN": 16643.344827586207, + "TP": 2685.793103448276, + "n_pred": 3032.413793103448, + "n_ref": 3092.793103448276 + }, + "mean": { + "1": { + "Dice": 0.8736865925877318, + "FN": 504.51724137931035, + "FP": 434.62068965517244, + "IoU": 0.7859258306017787, + "TN": 15970.620689655172, + "TP": 3173.0, + "n_pred": 3607.6206896551726, + "n_ref": 3677.5172413793102 + }, + "2": { + "Dice": 0.8639455606808257, + "FN": 352.51724137931035, + "FP": 426.7931034482759, + "IoU": 0.7686015192363281, + "TN": 16943.172413793105, + "TP": 2360.2758620689656, + "n_pred": 2787.0689655172414, + "n_ref": 2712.793103448276 + }, + "3": { + "Dice": 0.9147847989957517, + "FN": 363.9655172413793, + "FP": 178.44827586206895, + "IoU": 0.8519731358015825, + "TN": 17016.241379310344, + "TP": 2524.103448275862, + "n_pred": 2702.551724137931, + "n_ref": 2888.0689655172414 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9334226988382485, + "FN": 207, + "FP": 91, + "IoU": 0.8751571009635526, + "TN": 10413, + "TP": 2089, + "n_pred": 2180, + "n_ref": 2296 + }, + "2": { + "Dice": 0.8531380753138076, + "FN": 377, + "FP": 325, + "IoU": 0.7438890915724188, + "TN": 10059, + "TP": 2039, + "n_pred": 2364, + "n_ref": 2416 + }, + "3": { + "Dice": 0.9667594563615524, + "FN": 130, + "FP": 73, + "IoU": 0.9356576862123613, + "TN": 9645, + "TP": 2952, + "n_pred": 3025, + "n_ref": 3082 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7561805904347341, + "FN": 301, + "FP": 4068, + "IoU": 0.6079504666188084, + "TN": 33656, + "TP": 6775, + "n_pred": 10843, + "n_ref": 7076 + }, + "2": { + "Dice": 0.8582574772431729, + "FN": 500, + "FP": 1462, + "IoU": 0.7517084282460137, + "TN": 36898, + "TP": 5940, + "n_pred": 7402, + "n_ref": 6440 + }, + "3": { + "Dice": 0.9606849554429495, + "FN": 618, + "FP": 282, + "IoU": 0.9243443174176194, + "TN": 32904, + "TP": 10996, + "n_pred": 11278, + "n_ref": 11614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9199159021406728, + "FN": 445, + "FP": 393, + "IoU": 0.8517076623606441, + "TN": 13549, + "TP": 4813, + "n_pred": 5206, + "n_ref": 5258 + }, + "2": { + "Dice": 0.8949671772428884, + "FN": 207, + "FP": 273, + "IoU": 0.80990099009901, + "TN": 16675, + "TP": 2045, + "n_pred": 2318, + "n_ref": 2252 + }, + "3": { + "Dice": 0.9629084486311451, + "FN": 109, + "FP": 143, + "IoU": 0.9284700539313085, + "TN": 15677, + "TP": 3271, + "n_pred": 3414, + "n_ref": 3380 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6813880126182965, + "FN": 694, + "FP": 316, + "IoU": 0.5167464114832536, + "TN": 23510, + "TP": 1080, + "n_pred": 1396, + "n_ref": 1774 + }, + "2": { + "Dice": 0.6210281580986825, + "FN": 120, + "FP": 1347, + "IoU": 0.45035593855376543, + "TN": 22931, + "TP": 1202, + "n_pred": 2549, + "n_ref": 1322 + }, + "3": { + "Dice": 0.707221187668115, + "FN": 25, + "FP": 1390, + "IoU": 0.5470550576184379, + "TN": 22476, + "TP": 1709, + "n_pred": 3099, + "n_ref": 1734 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8101046553590762, + "FN": 5018, + "FP": 244, + "IoU": 0.6808200897731409, + "TN": 34714, + "TP": 11224, + "n_pred": 11468, + "n_ref": 16242 + }, + "2": { + "Dice": 0.7084785133565621, + "FN": 1476, + "FP": 1034, + "IoU": 0.5485611510791367, + "TN": 45640, + "TP": 3050, + "n_pred": 4084, + "n_ref": 4526 + }, + "3": { + "Dice": 0.84565446725635, + "FN": 3489, + "FP": 315, + "IoU": 0.7325834797891037, + "TN": 36975, + "TP": 10421, + "n_pred": 10736, + "n_ref": 13910 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8710888610763454, + "FN": 1466, + "FP": 491, + "IoU": 0.7716186252771619, + "TN": 49031, + "TP": 6612, + "n_pred": 7103, + "n_ref": 8078 + }, + "2": { + "Dice": 0.7336790509341479, + "FN": 2256, + "FP": 1493, + "IoU": 0.5793784359923707, + "TN": 48687, + "TP": 5164, + "n_pred": 6657, + "n_ref": 7420 + }, + "3": { + "Dice": 0.8271432796721173, + "FN": 3816, + "FP": 275, + "IoU": 0.7052381295482384, + "TN": 43721, + "TP": 9788, + "n_pred": 10063, + "n_ref": 13604 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8374671724540415, + "FN": 83, + "FP": 474, + "IoU": 0.7203815261044176, + "TN": 10808, + "TP": 1435, + "n_pred": 1909, + "n_ref": 1518 + }, + "2": { + "Dice": 0.9163332120771189, + "FN": 292, + "FP": 168, + "IoU": 0.8455857670359181, + "TN": 9821, + "TP": 2519, + "n_pred": 2687, + "n_ref": 2811 + }, + "3": { + "Dice": 0.8271092669432918, + "FN": 12, + "FP": 113, + "IoU": 0.7051886792452831, + "TN": 12376, + "TP": 299, + "n_pred": 412, + "n_ref": 311 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.845442536327609, + "FN": 234, + "FP": 0, + "IoU": 0.7322654462242563, + "TN": 5526, + "TP": 640, + "n_pred": 640, + "n_ref": 874 + }, + "2": { + "Dice": 0.9172693596754278, + "FN": 394, + "FP": 75, + "IoU": 0.8471814923427826, + "TN": 3331, + "TP": 2600, + "n_pred": 2675, + "n_ref": 2994 + }, + "3": { + "Dice": 0.9343246592317225, + "FN": 22, + "FP": 84, + "IoU": 0.8767441860465116, + "TN": 5540, + "TP": 754, + "n_pred": 838, + "n_ref": 776 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9092693871827233, + "FN": 152, + "FP": 495, + "IoU": 0.8336333247621497, + "TN": 2511, + "TP": 3242, + "n_pred": 3737, + "n_ref": 3394 + }, + "2": { + "Dice": 0.8939828080229226, + "FN": 96, + "FP": 52, + "IoU": 0.8082901554404145, + "TN": 5628, + "TP": 624, + "n_pred": 676, + "n_ref": 720 + }, + "3": { + "Dice": 0.9215189873417722, + "FN": 4, + "FP": 27, + "IoU": 0.8544600938967136, + "TN": 6187, + "TP": 182, + "n_pred": 209, + "n_ref": 186 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.915155661991105, + "FN": 268, + "FP": 228, + "IoU": 0.8435824660990224, + "TN": 28829, + "TP": 2675, + "n_pred": 2903, + "n_ref": 2943 + }, + "2": { + "Dice": 0.8964637444506812, + "FN": 532, + "FP": 1497, + "IoU": 0.8123554980116526, + "TN": 21187, + "TP": 8784, + "n_pred": 10281, + "n_ref": 9316 + }, + "3": { + "Dice": 0.6955865711052434, + "FN": 195, + "FP": 1419, + "IoU": 0.5332562174667438, + "TN": 28542, + "TP": 1844, + "n_pred": 3263, + "n_ref": 2039 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9303664921465968, + "FN": 171, + "FP": 95, + "IoU": 0.8697993147332355, + "TN": 10757, + "TP": 1777, + "n_pred": 1872, + "n_ref": 1948 + }, + "2": { + "Dice": 0.8570166396701516, + "FN": 622, + "FP": 349, + "IoU": 0.749806750837413, + "TN": 8919, + "TP": 2910, + "n_pred": 3259, + "n_ref": 3532 + }, + "3": { + "Dice": 0.9452513966480447, + "FN": 240, + "FP": 152, + "IoU": 0.8961864406779662, + "TN": 9024, + "TP": 3384, + "n_pred": 3536, + "n_ref": 3624 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9214175654853621, + "FN": 55, + "FP": 47, + "IoU": 0.8542857142857143, + "TN": 24900, + "TP": 598, + "n_pred": 645, + "n_ref": 653 + }, + "2": { + "Dice": 0.9202654193408027, + "FN": 215, + "FP": 518, + "IoU": 0.8523070723352811, + "TN": 20637, + "TP": 4230, + "n_pred": 4748, + "n_ref": 4445 + }, + "3": { + "Dice": 0.7737127371273713, + "FN": 233, + "FP": 101, + "IoU": 0.630939226519337, + "TN": 24695, + "TP": 571, + "n_pred": 672, + "n_ref": 804 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6970602106587015, + "FN": 1497, + "FP": 430, + "IoU": 0.5349903474903475, + "TN": 21456, + "TP": 2217, + "n_pred": 2647, + "n_ref": 3714 + }, + "2": { + "Dice": 0.9039286893364147, + "FN": 532, + "FP": 632, + "IoU": 0.8246987951807229, + "TN": 18960, + "TP": 5476, + "n_pred": 6108, + "n_ref": 6008 + }, + "3": { + "Dice": 0.9529908310289623, + "FN": 254, + "FP": 69, + "IoU": 0.9102029469001947, + "TN": 22003, + "TP": 3274, + "n_pred": 3343, + "n_ref": 3528 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.748527679623086, + "FN": 1626, + "FP": 82, + "IoU": 0.5981176470588235, + "TN": 14950, + "TP": 2542, + "n_pred": 2624, + "n_ref": 4168 + }, + "2": { + "Dice": 0.8514331853048042, + "FN": 209, + "FP": 527, + "IoU": 0.7413005272407733, + "TN": 16355, + "TP": 2109, + "n_pred": 2636, + "n_ref": 2318 + }, + "3": { + "Dice": 0.9397410358565738, + "FN": 167, + "FP": 75, + "IoU": 0.8863316110850165, + "TN": 17071, + "TP": 1887, + "n_pred": 1962, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9692580074038307, + "FN": 108, + "FP": 274, + "IoU": 0.9403497813866334, + "TN": 6396, + "TP": 6022, + "n_pred": 6296, + "n_ref": 6130 + }, + "2": { + "Dice": 0.8848230353929214, + "FN": 145, + "FP": 239, + "IoU": 0.7934373318988703, + "TN": 10941, + "TP": 1475, + "n_pred": 1714, + "n_ref": 1620 + }, + "3": { + "Dice": 0.9818901232689088, + "FN": 96, + "FP": 23, + "IoU": 0.964424514200299, + "TN": 9455, + "TP": 3226, + "n_pred": 3249, + "n_ref": 3322 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8134328358208955, + "FN": 37, + "FP": 13, + "IoU": 0.6855345911949685, + "TN": 12641, + "TP": 109, + "n_pred": 122, + "n_ref": 146 + }, + "2": { + "Dice": 0.8662301216089804, + "FN": 83, + "FP": 346, + "IoU": 0.764026402640264, + "TN": 10982, + "TP": 1389, + "n_pred": 1735, + "n_ref": 1472 + }, + "3": { + "Dice": 0.9775855289028706, + "FN": 67, + "FP": 47, + "IoU": 0.9561538461538461, + "TN": 10200, + "TP": 2486, + "n_pred": 2533, + "n_ref": 2553 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9452332657200812, + "FN": 2, + "FP": 52, + "IoU": 0.8961538461538462, + "TN": 12280, + "TP": 466, + "n_pred": 518, + "n_ref": 468 + }, + "2": { + "Dice": 0.9358464464810652, + "FN": 198, + "FP": 173, + "IoU": 0.8794280142996425, + "TN": 9723, + "TP": 2706, + "n_pred": 2879, + "n_ref": 2904 + }, + "3": { + "Dice": 0.958102766798419, + "FN": 48, + "FP": 111, + "IoU": 0.9195751138088012, + "TN": 10823, + "TP": 1818, + "n_pred": 1929, + "n_ref": 1866 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9446372500413155, + "FN": 254, + "FP": 81, + "IoU": 0.8950829940494832, + "TN": 9607, + "TP": 2858, + "n_pred": 2939, + "n_ref": 3112 + }, + "2": { + "Dice": 0.8943443132380361, + "FN": 137, + "FP": 203, + "IoU": 0.8088813940415964, + "TN": 11021, + "TP": 1439, + "n_pred": 1642, + "n_ref": 1576 + }, + "3": { + "Dice": 0.968070337806571, + "FN": 38, + "FP": 100, + "IoU": 0.9381165919282511, + "TN": 10570, + "TP": 2092, + "n_pred": 2192, + "n_ref": 2130 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.951381780962129, + "FN": 138, + "FP": 52, + "IoU": 0.9072718399219132, + "TN": 10751, + "TP": 1859, + "n_pred": 1911, + "n_ref": 1997 + }, + "2": { + "Dice": 0.9080831408775981, + "FN": 49, + "FP": 150, + "IoU": 0.8316412859560067, + "TN": 11618, + "TP": 983, + "n_pred": 1133, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9241736876215165, + "FN": 93, + "FP": 24, + "IoU": 0.8590361445783132, + "TN": 11970, + "TP": 713, + "n_pred": 737, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9649604946753693, + "FN": 17, + "FP": 187, + "IoU": 0.9322933952870893, + "TN": 9787, + "TP": 2809, + "n_pred": 2996, + "n_ref": 2826 + }, + "2": { + "Dice": 0.9551246537396122, + "FN": 42, + "FP": 39, + "IoU": 0.9141039236479321, + "TN": 11857, + "TP": 862, + "n_pred": 901, + "n_ref": 904 + }, + "3": { + "Dice": 0.9883527454242929, + "FN": 19, + "FP": 16, + "IoU": 0.9769736842105263, + "TN": 11280, + "TP": 1485, + "n_pred": 1501, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8432015979454986, + "FN": 827, + "FP": 272, + "IoU": 0.7289097187962507, + "TN": 21546, + "TP": 2955, + "n_pred": 3227, + "n_ref": 3782 + }, + "2": { + "Dice": 0.9205983889528193, + "FN": 108, + "FP": 513, + "IoU": 0.8528784648187633, + "TN": 21379, + "TP": 3600, + "n_pred": 4113, + "n_ref": 3708 + }, + "3": { + "Dice": 0.9120274914089347, + "FN": 205, + "FP": 51, + "IoU": 0.8382817435249527, + "TN": 24017, + "TP": 1327, + "n_pred": 1378, + "n_ref": 1532 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9435400069276065, + "FN": 113, + "FP": 50, + "IoU": 0.8931147540983606, + "TN": 11275, + "TP": 1362, + "n_pred": 1412, + "n_ref": 1475 + }, + "2": { + "Dice": 0.927400468384075, + "FN": 80, + "FP": 13, + "IoU": 0.8646288209606987, + "TN": 12113, + "TP": 594, + "n_pred": 607, + "n_ref": 674 + }, + "3": { + "Dice": 0.9791666666666666, + "FN": 8, + "FP": 30, + "IoU": 0.9591836734693877, + "TN": 11869, + "TP": 893, + "n_pred": 923, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9839213524439544, + "FN": 219, + "FP": 131, + "IoU": 0.9683515688579437, + "TN": 14541, + "TP": 10709, + "n_pred": 10840, + "n_ref": 10928 + }, + "2": { + "Dice": 0.797505502567865, + "FN": 423, + "FP": 129, + "IoU": 0.6632092739475289, + "TN": 23961, + "TP": 1087, + "n_pred": 1216, + "n_ref": 1510 + }, + "3": { + "Dice": 0.9411187438665358, + "FN": 198, + "FP": 42, + "IoU": 0.8887859128822985, + "TN": 23442, + "TP": 1918, + "n_pred": 1960, + "n_ref": 2116 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7599532859114556, + "FN": 155, + "FP": 2106, + "IoU": 0.6128424657534246, + "TN": 13360, + "TP": 3579, + "n_pred": 5685, + "n_ref": 3734 + }, + "2": { + "Dice": 0.8047058823529412, + "FN": 511, + "FP": 236, + "IoU": 0.6732283464566929, + "TN": 16914, + "TP": 1539, + "n_pred": 1775, + "n_ref": 2050 + }, + "3": { + "Dice": 0.9308783579837006, + "FN": 168, + "FP": 61, + "IoU": 0.870694522868436, + "TN": 17429, + "TP": 1542, + "n_pred": 1603, + "n_ref": 1710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9199757134183364, + "FN": 460, + "FP": 199, + "IoU": 0.8518102091297504, + "TN": 14753, + "TP": 3788, + "n_pred": 3987, + "n_ref": 4248 + }, + "2": { + "Dice": 0.7302185380557649, + "FN": 349, + "FP": 367, + "IoU": 0.5750741839762611, + "TN": 17515, + "TP": 969, + "n_pred": 1336, + "n_ref": 1318 + }, + "3": { + "Dice": 0.9404549950544016, + "FN": 243, + "FP": 58, + "IoU": 0.8876026885735624, + "TN": 16522, + "TP": 2377, + "n_pred": 2435, + "n_ref": 2620 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7948554692474213, + "FN": 67, + "FP": 1544, + "IoU": 0.6595519864750634, + "TN": 20868, + "TP": 3121, + "n_pred": 4665, + "n_ref": 3188 + }, + "2": { + "Dice": 0.9207939157855686, + "FN": 237, + "FP": 190, + "IoU": 0.853214162942592, + "TN": 22691, + "TP": 2482, + "n_pred": 2672, + "n_ref": 2719 + }, + "3": { + "Dice": 0.9580374435119432, + "FN": 48, + "FP": 82, + "IoU": 0.919454770755886, + "TN": 23986, + "TP": 1484, + "n_pred": 1566, + "n_ref": 1532 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9783795130142737, + "FN": 17, + "FP": 189, + "IoU": 0.9576741319087734, + "TN": 1533, + "TP": 4661, + "n_pred": 4850, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9546142208774584, + "FN": 33, + "FP": 27, + "IoU": 0.9131693198263386, + "TN": 5709, + "TP": 631, + "n_pred": 658, + "n_ref": 664 + }, + "3": { + "Dice": 0.9787234042553191, + "FN": 10, + "FP": 12, + "IoU": 0.9583333333333334, + "TN": 5872, + "TP": 506, + "n_pred": 518, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8948902333944607, + "FN": 264.25287356321843, + "FP": 269.632183908046, + "IoU": 0.8216479957210718, + "TN": 15346.333333333334, + "TP": 2657.7126436781614, + "n_pred": 2927.3448275862065, + "n_ref": 2921.965517241379 + }, + "mean": { + "1": { + "Dice": 0.8670291632775754, + "FN": 359.2758620689655, + "FP": 391.17241379310343, + "IoU": 0.7882317965062507, + "TN": 14607.689655172413, + "TP": 3179.793103448276, + "n_pred": 3570.9655172413795, + "n_ref": 3539.0689655172414 + }, + "2": { + "Dice": 0.8782929402195252, + "FN": 273.9655172413793, + "FP": 292.6896551724138, + "IoU": 0.7861970274628544, + "TN": 15864.862068965518, + "TP": 2106.4137931034484, + "n_pred": 2399.103448275862, + "n_ref": 2380.3793103448274 + }, + "3": { + "Dice": 0.9393485966862818, + "FN": 159.51724137931035, + "FP": 125.03448275862068, + "IoU": 0.8905151631941103, + "TN": 15566.448275862069, + "TP": 2686.9310344827586, + "n_pred": 2811.9655172413795, + "n_ref": 2846.448275862069 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9809084924292297, + "FN": 23, + "FP": 6, + "IoU": 0.962532299741602, + "TN": 12026, + "TP": 745, + "n_pred": 751, + "n_ref": 768 + }, + "2": { + "Dice": 0.905674995157854, + "FN": 96, + "FP": 391, + "IoU": 0.8276106194690266, + "TN": 9975, + "TP": 2338, + "n_pred": 2729, + "n_ref": 2434 + }, + "3": { + "Dice": 0.9648866130212144, + "FN": 163, + "FP": 125, + "IoU": 0.9321554770318021, + "TN": 8555, + "TP": 3957, + "n_pred": 4082, + "n_ref": 4120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6294240111034004, + "FN": 1049, + "FP": 19, + "IoU": 0.45924050632911395, + "TN": 10825, + "TP": 907, + "n_pred": 926, + "n_ref": 1956 + }, + "2": { + "Dice": 0.8658436213991769, + "FN": 94, + "FP": 69, + "IoU": 0.7634252539912917, + "TN": 12111, + "TP": 526, + "n_pred": 595, + "n_ref": 620 + }, + "3": { + "Dice": 0.9414847161572052, + "FN": 17, + "FP": 50, + "IoU": 0.8894389438943895, + "TN": 12194, + "TP": 539, + "n_pred": 589, + "n_ref": 556 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9255663430420712, + "FN": 62, + "FP": 30, + "IoU": 0.8614457831325302, + "TN": 12136, + "TP": 572, + "n_pred": 602, + "n_ref": 634 + }, + "2": { + "Dice": 0.8849402854646082, + "FN": 175, + "FP": 220, + "IoU": 0.7936259143155695, + "TN": 10886, + "TP": 1519, + "n_pred": 1739, + "n_ref": 1694 + }, + "3": { + "Dice": 0.9682170542635659, + "FN": 165, + "FP": 81, + "IoU": 0.9383921863260706, + "TN": 8807, + "TP": 3747, + "n_pred": 3828, + "n_ref": 3912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9766847652507186, + "FN": 13, + "FP": 60, + "IoU": 0.9544319600499376, + "TN": 11198, + "TP": 1529, + "n_pred": 1589, + "n_ref": 1542 + }, + "2": { + "Dice": 0.8297734627831715, + "FN": 123, + "FP": 140, + "IoU": 0.709070796460177, + "TN": 11896, + "TP": 641, + "n_pred": 781, + "n_ref": 764 + }, + "3": { + "Dice": 0.9600240456868049, + "FN": 47, + "FP": 86, + "IoU": 0.923121387283237, + "TN": 11070, + "TP": 1597, + "n_pred": 1683, + "n_ref": 1644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5083542188805347, + "FN": 941, + "FP": 1413, + "IoU": 0.3408008961075329, + "TN": 15629, + "TP": 1217, + "n_pred": 2630, + "n_ref": 2158 + }, + "2": { + "Dice": 0.869164265129683, + "FN": 368, + "FP": 313, + "IoU": 0.7686034658511722, + "TN": 16257, + "TP": 2262, + "n_pred": 2575, + "n_ref": 2630 + }, + "3": { + "Dice": 0.9725333333333334, + "FN": 147, + "FP": 59, + "IoU": 0.9465351674020244, + "TN": 15347, + "TP": 3647, + "n_pred": 3706, + "n_ref": 3794 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9541041482789056, + "FN": 9, + "FP": 303, + "IoU": 0.9122362869198313, + "TN": 15645, + "TP": 3243, + "n_pred": 3546, + "n_ref": 3252 + }, + "2": { + "Dice": 0.8291793313069908, + "FN": 282, + "FP": 280, + "IoU": 0.7082035306334372, + "TN": 17274, + "TP": 1364, + "n_pred": 1644, + "n_ref": 1646 + }, + "3": { + "Dice": 0.9782936738247243, + "FN": 140, + "FP": 47, + "IoU": 0.95750965689616, + "TN": 14799, + "TP": 4214, + "n_pred": 4261, + "n_ref": 4354 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9777578743095985, + "FN": 123, + "FP": 26, + "IoU": 0.9564836448598131, + "TN": 15776, + "TP": 3275, + "n_pred": 3301, + "n_ref": 3398 + }, + "2": { + "Dice": 0.8614185502727981, + "FN": 627, + "FP": 262, + "IoU": 0.7565717415115005, + "TN": 15548, + "TP": 2763, + "n_pred": 3025, + "n_ref": 3390 + }, + "3": { + "Dice": 0.9759188846641318, + "FN": 174, + "FP": 206, + "IoU": 0.9529702970297029, + "TN": 11120, + "TP": 7700, + "n_pred": 7906, + "n_ref": 7874 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7380213254150357, + "FN": 252, + "FP": 3630, + "IoU": 0.584812834224599, + "TN": 16250, + "TP": 5468, + "n_pred": 9098, + "n_ref": 5720 + }, + "2": { + "Dice": 0.8820378837361201, + "FN": 448, + "FP": 455, + "IoU": 0.7889693853704136, + "TN": 21321, + "TP": 3376, + "n_pred": 3831, + "n_ref": 3824 + }, + "3": { + "Dice": 0.9699189699189699, + "FN": 211, + "FP": 60, + "IoU": 0.9415948275862069, + "TN": 20960, + "TP": 4369, + "n_pred": 4429, + "n_ref": 4580 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9733162662465538, + "FN": 279, + "FP": 263, + "IoU": 0.9480195645919248, + "TN": 8773, + "TP": 9885, + "n_pred": 10148, + "n_ref": 10164 + }, + "2": { + "Dice": 0.8676599474145487, + "FN": 141, + "FP": 312, + "IoU": 0.7662538699690402, + "TN": 17262, + "TP": 1485, + "n_pred": 1797, + "n_ref": 1626 + }, + "3": { + "Dice": 0.9723820483314154, + "FN": 154, + "FP": 38, + "IoU": 0.9462486002239642, + "TN": 15628, + "TP": 3380, + "n_pred": 3418, + "n_ref": 3534 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8342334856668051, + "FN": 380, + "FP": 19, + "IoU": 0.7156094084105489, + "TN": 11397, + "TP": 1004, + "n_pred": 1023, + "n_ref": 1384 + }, + "2": { + "Dice": 0.8273273273273273, + "FN": 60, + "FP": 400, + "IoU": 0.70550576184379, + "TN": 11238, + "TP": 1102, + "n_pred": 1502, + "n_ref": 1162 + }, + "3": { + "Dice": 0.8222511951325511, + "FN": 8, + "FP": 401, + "IoU": 0.6981549815498155, + "TN": 11445, + "TP": 946, + "n_pred": 1347, + "n_ref": 954 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5901639344262295, + "FN": 122, + "FP": 3, + "IoU": 0.4186046511627907, + "TN": 12585, + "TP": 90, + "n_pred": 93, + "n_ref": 212 + }, + "2": { + "Dice": 0.945052955553544, + "FN": 217, + "FP": 390, + "IoU": 0.8958297580229964, + "TN": 6973, + "TP": 5220, + "n_pred": 5610, + "n_ref": 5437 + }, + "3": { + "Dice": 0.9252620899560365, + "FN": 99, + "FP": 122, + "IoU": 0.8609188168659534, + "TN": 11211, + "TP": 1368, + "n_pred": 1490, + "n_ref": 1467 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9695769067496817, + "FN": 122, + "FP": 93, + "IoU": 0.9409502883823125, + "TN": 9159, + "TP": 3426, + "n_pred": 3519, + "n_ref": 3548 + }, + "2": { + "Dice": 0.9196428571428571, + "FN": 73, + "FP": 53, + "IoU": 0.8512396694214877, + "TN": 11953, + "TP": 721, + "n_pred": 774, + "n_ref": 794 + }, + "3": { + "Dice": 0.9734411085450346, + "FN": 41, + "FP": 5, + "IoU": 0.9482564679415073, + "TN": 11911, + "TP": 843, + "n_pred": 848, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9640401903754627, + "FN": 345, + "FP": 63, + "IoU": 0.9305768249106687, + "TN": 6923, + "TP": 5469, + "n_pred": 5532, + "n_ref": 5814 + }, + "2": { + "Dice": 0.9241573033707865, + "FN": 73, + "FP": 89, + "IoU": 0.8590078328981723, + "TN": 11651, + "TP": 987, + "n_pred": 1076, + "n_ref": 1060 + }, + "3": { + "Dice": 0.9546012269938651, + "FN": 64, + "FP": 10, + "IoU": 0.9131455399061033, + "TN": 11948, + "TP": 778, + "n_pred": 788, + "n_ref": 842 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9086186540731995, + "FN": 124, + "FP": 263, + "IoU": 0.8325400259627866, + "TN": 42489, + "TP": 1924, + "n_pred": 2187, + "n_ref": 2048 + }, + "2": { + "Dice": 0.926478366656088, + "FN": 818, + "FP": 572, + "IoU": 0.8630271974773355, + "TN": 34652, + "TP": 8758, + "n_pred": 9330, + "n_ref": 9576 + }, + "3": { + "Dice": 0.8506928922664283, + "FN": 427, + "FP": 241, + "IoU": 0.7401789187086737, + "TN": 42229, + "TP": 1903, + "n_pred": 2144, + "n_ref": 2330 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8572683355292051, + "FN": 240, + "FP": 85, + "IoU": 0.7501921598770177, + "TN": 5099, + "TP": 976, + "n_pred": 1061, + "n_ref": 1216 + }, + "2": { + "Dice": 0.8783256473926925, + "FN": 166, + "FP": 177, + "IoU": 0.7830487033523087, + "TN": 4819, + "TP": 1238, + "n_pred": 1415, + "n_ref": 1404 + }, + "3": { + "Dice": 0.9237435008665511, + "FN": 144, + "FP": 32, + "IoU": 0.8582930756843801, + "TN": 5158, + "TP": 1066, + "n_pred": 1098, + "n_ref": 1210 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7665775741377115, + "FN": 3053, + "FP": 615, + "IoU": 0.6215044887008565, + "TN": 22309, + "TP": 6023, + "n_pred": 6638, + "n_ref": 9076 + }, + "2": { + "Dice": 0.900296987696224, + "FN": 250, + "FP": 690, + "IoU": 0.8186728395061729, + "TN": 26816, + "TP": 4244, + "n_pred": 4934, + "n_ref": 4494 + }, + "3": { + "Dice": 0.9728442728442729, + "FN": 385, + "FP": 37, + "IoU": 0.9471244204986844, + "TN": 24019, + "TP": 7559, + "n_pred": 7596, + "n_ref": 7944 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6418199419167473, + "FN": 255, + "FP": 485, + "IoU": 0.47255880256593014, + "TN": 24197, + "TP": 663, + "n_pred": 1148, + "n_ref": 918 + }, + "2": { + "Dice": 0.9117168429617575, + "FN": 307, + "FP": 127, + "IoU": 0.8377570093457944, + "TN": 22925, + "TP": 2241, + "n_pred": 2368, + "n_ref": 2548 + }, + "3": { + "Dice": 0.9812862414338429, + "FN": 57, + "FP": 85, + "IoU": 0.9632600258732212, + "TN": 21735, + "TP": 3723, + "n_pred": 3808, + "n_ref": 3780 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7956556717618665, + "FN": 483, + "FP": 25, + "IoU": 0.6606546426185704, + "TN": 36903, + "TP": 989, + "n_pred": 1014, + "n_ref": 1472 + }, + "2": { + "Dice": 0.8560057887120116, + "FN": 242, + "FP": 554, + "IoU": 0.7482605945604048, + "TN": 35238, + "TP": 2366, + "n_pred": 2920, + "n_ref": 2608 + }, + "3": { + "Dice": 0.9690794096978215, + "FN": 139, + "FP": 125, + "IoU": 0.940013633265167, + "TN": 33999, + "TP": 4137, + "n_pred": 4262, + "n_ref": 4276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9809571121046531, + "FN": 106, + "FP": 9, + "IoU": 0.9626259343516412, + "TN": 9723, + "TP": 2962, + "n_pred": 2971, + "n_ref": 3068 + }, + "2": { + "Dice": 0.9416257501363884, + "FN": 112, + "FP": 102, + "IoU": 0.8896907216494845, + "TN": 10860, + "TP": 1726, + "n_pred": 1828, + "n_ref": 1838 + }, + "3": { + "Dice": 0.9811876699909338, + "FN": 79, + "FP": 87, + "IoU": 0.9630700778642937, + "TN": 8305, + "TP": 4329, + "n_pred": 4416, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8910569105691057, + "FN": 66, + "FP": 202, + "IoU": 0.8035190615835777, + "TN": 17836, + "TP": 1096, + "n_pred": 1298, + "n_ref": 1162 + }, + "2": { + "Dice": 0.8762935089369709, + "FN": 530, + "FP": 522, + "IoU": 0.7798241942235244, + "TN": 14422, + "TP": 3726, + "n_pred": 4248, + "n_ref": 4256 + }, + "3": { + "Dice": 0.9515465760772394, + "FN": 400, + "FP": 142, + "IoU": 0.9075716234652115, + "TN": 13336, + "TP": 5322, + "n_pred": 5464, + "n_ref": 5722 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6825613079019074, + "FN": 176, + "FP": 1688, + "IoU": 0.5180972078593589, + "TN": 8932, + "TP": 2004, + "n_pred": 3692, + "n_ref": 2180 + }, + "2": { + "Dice": 0.8940516723412778, + "FN": 60, + "FP": 469, + "IoU": 0.8084027526258601, + "TN": 10039, + "TP": 2232, + "n_pred": 2701, + "n_ref": 2292 + }, + "3": { + "Dice": 0.7958307786633967, + "FN": 72, + "FP": 594, + "IoU": 0.6608961303462322, + "TN": 10836, + "TP": 1298, + "n_pred": 1892, + "n_ref": 1370 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.970873786407767, + "FN": 158, + "FP": 64, + "IoU": 0.9433962264150944, + "TN": 8878, + "TP": 3700, + "n_pred": 3764, + "n_ref": 3858 + }, + "2": { + "Dice": 0.929541047188106, + "FN": 39, + "FP": 70, + "IoU": 0.8683574879227053, + "TN": 11972, + "TP": 719, + "n_pred": 789, + "n_ref": 758 + }, + "3": { + "Dice": 0.9722891566265061, + "FN": 23, + "FP": 23, + "IoU": 0.9460726846424384, + "TN": 11947, + "TP": 807, + "n_pred": 830, + "n_ref": 830 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9720223820943246, + "FN": 152, + "FP": 58, + "IoU": 0.9455676516329704, + "TN": 8942, + "TP": 3648, + "n_pred": 3706, + "n_ref": 3800 + }, + "2": { + "Dice": 0.8936170212765957, + "FN": 18, + "FP": 62, + "IoU": 0.8076923076923077, + "TN": 12384, + "TP": 336, + "n_pred": 398, + "n_ref": 354 + }, + "3": { + "Dice": 0.9654036243822076, + "FN": 34, + "FP": 8, + "IoU": 0.9331210191082803, + "TN": 12172, + "TP": 586, + "n_pred": 594, + "n_ref": 620 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9737363726461843, + "FN": 189, + "FP": 23, + "IoU": 0.9488169966199903, + "TN": 8658, + "TP": 3930, + "n_pred": 3953, + "n_ref": 4119 + }, + "2": { + "Dice": 0.8573476702508961, + "FN": 29, + "FP": 170, + "IoU": 0.7503136762860728, + "TN": 12003, + "TP": 598, + "n_pred": 768, + "n_ref": 627 + }, + "3": { + "Dice": 0.9676855895196507, + "FN": 8, + "FP": 29, + "IoU": 0.937394247038917, + "TN": 12209, + "TP": 554, + "n_pred": 583, + "n_ref": 562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9695263737608616, + "FN": 151, + "FP": 98, + "IoU": 0.940855106888361, + "TN": 8590, + "TP": 3961, + "n_pred": 4059, + "n_ref": 4112 + }, + "2": { + "Dice": 0.9726775956284153, + "FN": 8, + "FP": 12, + "IoU": 0.9468085106382979, + "TN": 12424, + "TP": 356, + "n_pred": 368, + "n_ref": 364 + }, + "3": { + "Dice": 0.9940119760479041, + "FN": 2, + "FP": 0, + "IoU": 0.9880952380952381, + "TN": 12632, + "TP": 166, + "n_pred": 166, + "n_ref": 168 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9557877339000059, + "FN": 404, + "FP": 345, + "IoU": 0.9153193894855851, + "TN": 16755, + "TP": 8096, + "n_pred": 8441, + "n_ref": 8500 + }, + "2": { + "Dice": 0.7444532488114105, + "FN": 782, + "FP": 508, + "IoU": 0.5929315241401073, + "TN": 22431, + "TP": 1879, + "n_pred": 2387, + "n_ref": 2661 + }, + "3": { + "Dice": 0.927586707299376, + "FN": 477, + "FP": 22, + "IoU": 0.8649526387009472, + "TN": 21905, + "TP": 3196, + "n_pred": 3218, + "n_ref": 3673 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8542831910509273, + "FN": 221, + "FP": 1264, + "IoU": 0.7456320657759506, + "TN": 26162, + "TP": 4353, + "n_pred": 5617, + "n_ref": 4574 + }, + "2": { + "Dice": 0.7877745435300344, + "FN": 983, + "FP": 621, + "IoU": 0.6498581095830605, + "TN": 27419, + "TP": 2977, + "n_pred": 3598, + "n_ref": 3960 + }, + "3": { + "Dice": 0.864181267290212, + "FN": 346, + "FP": 685, + "IoU": 0.7608443516585479, + "TN": 27689, + "TP": 3280, + "n_pred": 3965, + "n_ref": 3626 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9619069171003998, + "FN": 417, + "FP": 88, + "IoU": 0.9266095044324952, + "TN": 5919, + "TP": 6376, + "n_pred": 6464, + "n_ref": 6793 + }, + "2": { + "Dice": 0.8553054662379421, + "FN": 214, + "FP": 191, + "IoU": 0.7471910112359551, + "TN": 11198, + "TP": 1197, + "n_pred": 1388, + "n_ref": 1411 + }, + "3": { + "Dice": 0.953899681066976, + "FN": 30, + "FP": 129, + "IoU": 0.9118625277161863, + "TN": 10996, + "TP": 1645, + "n_pred": 1774, + "n_ref": 1675 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9390415079205935, + "FN": 504, + "FP": 104, + "IoU": 0.885087885087885, + "TN": 13909, + "TP": 4683, + "n_pred": 4787, + "n_ref": 5187 + }, + "2": { + "Dice": 0.8331113225499525, + "FN": 610, + "FP": 267, + "IoU": 0.7139595564253098, + "TN": 16134, + "TP": 2189, + "n_pred": 2456, + "n_ref": 2799 + }, + "3": { + "Dice": 0.790625, + "FN": 573, + "FP": 97, + "IoU": 0.6537467700258398, + "TN": 17265, + "TP": 1265, + "n_pred": 1362, + "n_ref": 1838 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.8935874191009588, + "FN": 179.54022988505747, + "FP": 167.02298850574712, + "IoU": 0.8178543861401187, + "TN": 12286.3908045977, + "TP": 1711.8735632183907, + "n_pred": 1878.896551724138, + "n_ref": 1891.4137931034481 + }, + "mean": { + "1": { + "Dice": 0.857998988615349, + "FN": 250.9655172413793, + "FP": 227.20689655172413, + "IoU": 0.770597842330149, + "TN": 11904.827586206897, + "TP": 1961.8275862068965, + "n_pred": 2189.0344827586205, + "n_ref": 2212.793103448276 + }, + "2": { + "Dice": 0.8984114344151388, + "FN": 213.68965517241378, + "FP": 163.55172413793105, + "IoU": 0.8177604701427639, + "TN": 12290.586206896553, + "TP": 1677.0, + "n_pred": 1840.551724137931, + "n_ref": 1890.6896551724137 + }, + "3": { + "Dice": 0.9243518342723887, + "FN": 73.96551724137932, + "FP": 110.3103448275862, + "IoU": 0.8652048459474435, + "TN": 12663.758620689656, + "TP": 1496.7931034482758, + "n_pred": 1607.103448275862, + "n_ref": 1570.7586206896551 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6037735849056604, + "FN": 0, + "FP": 21, + "IoU": 0.43243243243243246, + "TN": 12763, + "TP": 16, + "n_pred": 37, + "n_ref": 16 + }, + "2": { + "Dice": 0.8680310515172901, + "FN": 120, + "FP": 254, + "IoU": 0.7668329177057357, + "TN": 11196, + "TP": 1230, + "n_pred": 1484, + "n_ref": 1350 + }, + "3": { + "Dice": 0.9552715654952076, + "FN": 221, + "FP": 3, + "IoU": 0.9143730886850153, + "TN": 10184, + "TP": 2392, + "n_pred": 2395, + "n_ref": 2613 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9620793571069814, + "FN": 285, + "FP": 17, + "IoU": 0.9269295910960561, + "TN": 8667, + "TP": 3831, + "n_pred": 3848, + "n_ref": 4116 + }, + "2": { + "Dice": 0.9023190442726634, + "FN": 18, + "FP": 121, + "IoU": 0.8220230473751601, + "TN": 12019, + "TP": 642, + "n_pred": 763, + "n_ref": 660 + }, + "3": { + "Dice": 0.919831223628692, + "FN": 76, + "FP": 0, + "IoU": 0.8515625, + "TN": 12288, + "TP": 436, + "n_pred": 436, + "n_ref": 512 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9284567759688145, + "FN": 247, + "FP": 377, + "IoU": 0.86646693772737, + "TN": 14527, + "TP": 4049, + "n_pred": 4426, + "n_ref": 4296 + }, + "2": { + "Dice": 0.9133134053805473, + "FN": 616, + "FP": 138, + "IoU": 0.8404570461278036, + "TN": 14474, + "TP": 3972, + "n_pred": 4110, + "n_ref": 4588 + }, + "3": { + "Dice": 0.972972972972973, + "FN": 72, + "FP": 140, + "IoU": 0.9473684210526315, + "TN": 15172, + "TP": 3816, + "n_pred": 3956, + "n_ref": 3888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9405577299412916, + "FN": 415, + "FP": 71, + "IoU": 0.8877857307781113, + "TN": 14869, + "TP": 3845, + "n_pred": 3916, + "n_ref": 4260 + }, + "2": { + "Dice": 0.9090570950344058, + "FN": 335, + "FP": 154, + "IoU": 0.8332765086941698, + "TN": 16267, + "TP": 2444, + "n_pred": 2598, + "n_ref": 2779 + }, + "3": { + "Dice": 0.9797630282059347, + "FN": 30, + "FP": 163, + "IoU": 0.9603288797533401, + "TN": 14335, + "TP": 4672, + "n_pred": 4835, + "n_ref": 4702 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6275952693823916, + "FN": 1408, + "FP": 9, + "IoU": 0.457296055151283, + "TN": 10189, + "TP": 1194, + "n_pred": 1203, + "n_ref": 2602 + }, + "2": { + "Dice": 0.9485261768587769, + "FN": 86, + "FP": 31, + "IoU": 0.902092050209205, + "TN": 11605, + "TP": 1078, + "n_pred": 1109, + "n_ref": 1164 + }, + "3": { + "Dice": 0.9911894273127754, + "FN": 23, + "FP": 21, + "IoU": 0.982532751091703, + "TN": 10281, + "TP": 2475, + "n_pred": 2496, + "n_ref": 2498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 12798, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + }, + "2": { + "Dice": 0.9261744966442953, + "FN": 125, + "FP": 62, + "IoU": 0.8625, + "TN": 11440, + "TP": 1173, + "n_pred": 1235, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9850029994001199, + "FN": 22, + "FP": 78, + "IoU": 0.9704491725768322, + "TN": 9416, + "TP": 3284, + "n_pred": 3362, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9672025723472669, + "FN": 62, + "FP": 40, + "IoU": 0.9364881693648817, + "TN": 4794, + "TP": 1504, + "n_pred": 1544, + "n_ref": 1566 + }, + "2": { + "Dice": 0.9155503785672685, + "FN": 18, + "FP": 127, + "IoU": 0.8442534908700322, + "TN": 5469, + "TP": 786, + "n_pred": 913, + "n_ref": 804 + }, + "3": { + "Dice": 0.9507202426080363, + "FN": 65, + "FP": 0, + "IoU": 0.9060693641618497, + "TN": 5708, + "TP": 627, + "n_pred": 627, + "n_ref": 692 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8571428571428571, + "FN": 627, + "FP": 412, + "IoU": 0.75, + "TN": 21444, + "TP": 3117, + "n_pred": 3529, + "n_ref": 3744 + }, + "2": { + "Dice": 0.9106241536378186, + "FN": 373, + "FP": 1079, + "IoU": 0.8359136625607413, + "TN": 16751, + "TP": 7397, + "n_pred": 8476, + "n_ref": 7770 + }, + "3": { + "Dice": 0.9293435688547704, + "FN": 200, + "FP": 251, + "IoU": 0.868012876792508, + "TN": 22183, + "TP": 2966, + "n_pred": 3217, + "n_ref": 3166 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9432314410480349, + "FN": 10, + "FP": 3, + "IoU": 0.8925619834710744, + "TN": 12679, + "TP": 108, + "n_pred": 111, + "n_ref": 118 + }, + "2": { + "Dice": 0.8389275913025122, + "FN": 621, + "FP": 142, + "IoU": 0.7225454545454545, + "TN": 10050, + "TP": 1987, + "n_pred": 2129, + "n_ref": 2608 + }, + "3": { + "Dice": 0.8877995642701525, + "FN": 231, + "FP": 387, + "IoU": 0.7982370225269344, + "TN": 9737, + "TP": 2445, + "n_pred": 2832, + "n_ref": 2676 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9118293065578914, + "FN": 239, + "FP": 42, + "IoU": 0.8379469434832757, + "TN": 11066, + "TP": 1453, + "n_pred": 1495, + "n_ref": 1692 + }, + "3": { + "Dice": 0.929676511954993, + "FN": 49, + "FP": 51, + "IoU": 0.8685939553219448, + "TN": 12039, + "TP": 661, + "n_pred": 712, + "n_ref": 710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8161764705882353, + "FN": 1619, + "FP": 31, + "IoU": 0.6894409937888198, + "TN": 7487, + "TP": 3663, + "n_pred": 3694, + "n_ref": 5282 + }, + "2": { + "Dice": 0.9384223918575063, + "FN": 120, + "FP": 122, + "IoU": 0.8839884947267498, + "TN": 10714, + "TP": 1844, + "n_pred": 1966, + "n_ref": 1964 + }, + "3": { + "Dice": 0.9655950366610265, + "FN": 30, + "FP": 31, + "IoU": 0.9334787350054525, + "TN": 11883, + "TP": 856, + "n_pred": 887, + "n_ref": 886 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5549132947976878, + "FN": 98, + "FP": 1211, + "IoU": 0.384, + "TN": 23475, + "TP": 816, + "n_pred": 2027, + "n_ref": 914 + }, + "2": { + "Dice": 0.8650565782806958, + "FN": 465, + "FP": 334, + "IoU": 0.7622023809523809, + "TN": 22240, + "TP": 2561, + "n_pred": 2895, + "n_ref": 3026 + }, + "3": { + "Dice": 0.9501661129568106, + "FN": 47, + "FP": 253, + "IoU": 0.9050632911392406, + "TN": 22440, + "TP": 2860, + "n_pred": 3113, + "n_ref": 2907 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7023933402705516, + "FN": 74, + "FP": 1070, + "IoU": 0.541299117882919, + "TN": 10306, + "TP": 1350, + "n_pred": 2420, + "n_ref": 1424 + }, + "2": { + "Dice": 0.9361702127659575, + "FN": 56, + "FP": 82, + "IoU": 0.88, + "TN": 11650, + "TP": 1012, + "n_pred": 1094, + "n_ref": 1068 + }, + "3": { + "Dice": 0.9797272392185772, + "FN": 21, + "FP": 34, + "IoU": 0.9602601156069365, + "TN": 11416, + "TP": 1329, + "n_pred": 1363, + "n_ref": 1350 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9670728545501686, + "FN": 138, + "FP": 116, + "IoU": 0.9362449799196787, + "TN": 8816, + "TP": 3730, + "n_pred": 3846, + "n_ref": 3868 + }, + "2": { + "Dice": 0.9071537290715372, + "FN": 18, + "FP": 104, + "IoU": 0.83008356545961, + "TN": 12082, + "TP": 596, + "n_pred": 700, + "n_ref": 614 + }, + "3": { + "Dice": 0.980722891566265, + "FN": 26, + "FP": 6, + "IoU": 0.9621749408983451, + "TN": 11954, + "TP": 814, + "n_pred": 820, + "n_ref": 840 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8281938325991189, + "FN": 78, + "FP": 0, + "IoU": 0.706766917293233, + "TN": 6134, + "TP": 188, + "n_pred": 188, + "n_ref": 266 + }, + "2": { + "Dice": 0.8488191691087743, + "FN": 730, + "FP": 147, + "IoU": 0.7373465109314166, + "TN": 3061, + "TP": 2462, + "n_pred": 2609, + "n_ref": 3192 + }, + "3": { + "Dice": 0.8553419476835802, + "FN": 369, + "FP": 90, + "IoU": 0.7472466960352423, + "TN": 4584, + "TP": 1357, + "n_pred": 1447, + "n_ref": 1726 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8019559902200489, + "FN": 82, + "FP": 80, + "IoU": 0.6693877551020408, + "TN": 5910, + "TP": 328, + "n_pred": 408, + "n_ref": 410 + }, + "3": { + "Dice": 0.8365261813537676, + "FN": 25, + "FP": 231, + "IoU": 0.7189901207464325, + "TN": 5489, + "TP": 655, + "n_pred": 886, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.880389680678333, + "FN": 20, + "FP": 643, + "IoU": 0.7863358040605866, + "TN": 3297, + "TP": 2440, + "n_pred": 3083, + "n_ref": 2460 + }, + "2": { + "Dice": 0.9470588235294117, + "FN": 71, + "FP": 37, + "IoU": 0.8994413407821229, + "TN": 5326, + "TP": 966, + "n_pred": 1003, + "n_ref": 1037 + }, + "3": { + "Dice": 0.9768339768339769, + "FN": 28, + "FP": 8, + "IoU": 0.9547169811320755, + "TN": 5605, + "TP": 759, + "n_pred": 767, + "n_ref": 787 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient075_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.731016731016731, + "FN": 18, + "FP": 400, + "IoU": 0.5760649087221096, + "TN": 18214, + "TP": 568, + "n_pred": 968, + "n_ref": 586 + }, + "2": { + "Dice": 0.8706134476292526, + "FN": 524, + "FP": 442, + "IoU": 0.7708728652751423, + "TN": 14984, + "TP": 3250, + "n_pred": 3692, + "n_ref": 3774 + }, + "3": { + "Dice": 0.9440464666021298, + "FN": 86, + "FP": 203, + "IoU": 0.894022735606894, + "TN": 16473, + "TP": 2438, + "n_pred": 2641, + "n_ref": 2524 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9011576135351737, + "FN": 114, + "FP": 219, + "IoU": 0.820097244732577, + "TN": 10949, + "TP": 1518, + "n_pred": 1737, + "n_ref": 1632 + }, + "2": { + "Dice": 0.846215139442231, + "FN": 29, + "FP": 164, + "IoU": 0.7334254143646409, + "TN": 12076, + "TP": 531, + "n_pred": 695, + "n_ref": 560 + }, + "3": { + "Dice": 0.7325881341358556, + "FN": 0, + "FP": 311, + "IoU": 0.5780189959294437, + "TN": 12063, + "TP": 426, + "n_pred": 737, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8448275862068966, + "FN": 192, + "FP": 96, + "IoU": 0.7313432835820896, + "TN": 18128, + "TP": 784, + "n_pred": 880, + "n_ref": 976 + }, + "2": { + "Dice": 0.9151785714285714, + "FN": 430, + "FP": 254, + "IoU": 0.8436213991769548, + "TN": 14826, + "TP": 3690, + "n_pred": 3944, + "n_ref": 4120 + }, + "3": { + "Dice": 0.9509543367963276, + "FN": 170, + "FP": 33, + "IoU": 0.9064947029018885, + "TN": 17029, + "TP": 1968, + "n_pred": 2001, + "n_ref": 2138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9814696485623003, + "FN": 40, + "FP": 18, + "IoU": 0.9636135508155583, + "TN": 17606, + "TP": 1536, + "n_pred": 1554, + "n_ref": 1576 + }, + "2": { + "Dice": 0.943704340352385, + "FN": 70, + "FP": 61, + "IoU": 0.8934092758340114, + "TN": 17971, + "TP": 1098, + "n_pred": 1159, + "n_ref": 1168 + }, + "3": { + "Dice": 0.9765580331618068, + "FN": 4, + "FP": 37, + "IoU": 0.9541899441340782, + "TN": 18305, + "TP": 854, + "n_pred": 891, + "n_ref": 858 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8975181857081729, + "FN": 717, + "FP": 241, + "IoU": 0.8140888802639239, + "TN": 7647, + "TP": 4195, + "n_pred": 4436, + "n_ref": 4912 + }, + "2": { + "Dice": 0.823963133640553, + "FN": 128, + "FP": 254, + "IoU": 0.700626959247649, + "TN": 11524, + "TP": 894, + "n_pred": 1148, + "n_ref": 1022 + }, + "3": { + "Dice": 0.8707683249926406, + "FN": 25, + "FP": 414, + "IoU": 0.7711157455683003, + "TN": 10882, + "TP": 1479, + "n_pred": 1893, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9725770537911638, + "FN": 339, + "FP": 129, + "IoU": 0.9466179993156154, + "TN": 10433, + "TP": 8299, + "n_pred": 8428, + "n_ref": 8638 + }, + "2": { + "Dice": 0.9306440198159943, + "FN": 111, + "FP": 85, + "IoU": 0.8702845797485109, + "TN": 17689, + "TP": 1315, + "n_pred": 1400, + "n_ref": 1426 + }, + "3": { + "Dice": 0.8421052631578947, + "FN": 6, + "FP": 60, + "IoU": 0.7272727272727273, + "TN": 18958, + "TP": 176, + "n_pred": 236, + "n_ref": 182 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9385722191477587, + "FN": 70, + "FP": 152, + "IoU": 0.8842544316996872, + "TN": 10882, + "TP": 1696, + "n_pred": 1848, + "n_ref": 1766 + }, + "2": { + "Dice": 0.9056122448979592, + "FN": 226, + "FP": 70, + "IoU": 0.8275058275058275, + "TN": 11084, + "TP": 1420, + "n_pred": 1490, + "n_ref": 1646 + }, + "3": { + "Dice": 0.8414342629482072, + "FN": 2, + "FP": 197, + "IoU": 0.7262723521320495, + "TN": 12073, + "TP": 528, + "n_pred": 725, + "n_ref": 530 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9365958756540474, + "FN": 109, + "FP": 303, + "IoU": 0.8807525325615051, + "TN": 9345, + "TP": 3043, + "n_pred": 3346, + "n_ref": 3152 + }, + "2": { + "Dice": 0.887970072848986, + "FN": 407, + "FP": 162, + "IoU": 0.7985127478753541, + "TN": 9976, + "TP": 2255, + "n_pred": 2417, + "n_ref": 2662 + }, + "3": { + "Dice": 0.9506346967559943, + "FN": 44, + "FP": 96, + "IoU": 0.9059139784946236, + "TN": 11312, + "TP": 1348, + "n_pred": 1444, + "n_ref": 1392 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9325974635979333, + "FN": 550, + "FP": 24, + "IoU": 0.8737073707370737, + "TN": 8255, + "TP": 3971, + "n_pred": 3995, + "n_ref": 4521 + }, + "2": { + "Dice": 0.9189534141671984, + "FN": 82, + "FP": 45, + "IoU": 0.8500590318772137, + "TN": 11953, + "TP": 720, + "n_pred": 765, + "n_ref": 802 + }, + "3": { + "Dice": 0.8487858719646799, + "FN": 264, + "FP": 10, + "IoU": 0.7372962607861937, + "TN": 11757, + "TP": 769, + "n_pred": 779, + "n_ref": 1033 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7344632768361582, + "FN": 48, + "FP": 986, + "IoU": 0.5803571428571429, + "TN": 23136, + "TP": 1430, + "n_pred": 2416, + "n_ref": 1478 + }, + "2": { + "Dice": 0.9252647503782149, + "FN": 97, + "FP": 150, + "IoU": 0.8609234234234234, + "TN": 23824, + "TP": 1529, + "n_pred": 1679, + "n_ref": 1626 + }, + "3": { + "Dice": 0.9531396438612934, + "FN": 9, + "FP": 91, + "IoU": 0.9104744852282901, + "TN": 24483, + "TP": 1017, + "n_pred": 1108, + "n_ref": 1026 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8773985520027862, + "FN": 340.7356321839081, + "FP": 264.97701149425285, + "IoU": 0.7995404575815171, + "TN": 16199.310344827585, + "TP": 2394.977011494253, + "n_pred": 2659.9540229885056, + "n_ref": 2735.7126436781605 + }, + "mean": { + "1": { + "Dice": 0.8242779900890902, + "FN": 653.9655172413793, + "FP": 347.3448275862069, + "IoU": 0.7396844288492053, + "TN": 14721.344827586207, + "TP": 3477.344827586207, + "n_pred": 3824.689655172414, + "n_ref": 4131.310344827586 + }, + "2": { + "Dice": 0.8733378125480281, + "FN": 241.51724137931035, + "FP": 247.75862068965517, + "IoU": 0.7780466905295249, + "TN": 17172.55172413793, + "TP": 1538.1724137931035, + "n_pred": 1785.9310344827586, + "n_ref": 1779.6896551724137 + }, + "3": { + "Dice": 0.9345798533712403, + "FN": 126.72413793103448, + "FP": 199.82758620689654, + "IoU": 0.8808902533658215, + "TN": 16704.03448275862, + "TP": 2169.4137931034484, + "n_pred": 2369.2413793103447, + "n_ref": 2296.137931034483 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.845841784989858, + "FN": 14, + "FP": 290, + "IoU": 0.7328646748681898, + "TN": 11662, + "TP": 834, + "n_pred": 1124, + "n_ref": 848 + }, + "2": { + "Dice": 0.9310094408133623, + "FN": 51, + "FP": 44, + "IoU": 0.8709239130434783, + "TN": 12064, + "TP": 641, + "n_pred": 685, + "n_ref": 692 + }, + "3": { + "Dice": 0.9805663520266519, + "FN": 31, + "FP": 4, + "IoU": 0.9618736383442266, + "TN": 11882, + "TP": 883, + "n_pred": 887, + "n_ref": 914 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.800356903859023, + "FN": 4676, + "FP": 694, + "IoU": 0.6671625139457047, + "TN": 54266, + "TP": 10764, + "n_pred": 11458, + "n_ref": 15440 + }, + "2": { + "Dice": 0.79977529893267, + "FN": 987, + "FP": 1508, + "IoU": 0.6663546402781493, + "TN": 62922, + "TP": 4983, + "n_pred": 6491, + "n_ref": 5970 + }, + "3": { + "Dice": 0.8721487133695917, + "FN": 316, + "FP": 2834, + "IoU": 0.7732834316971354, + "TN": 56506, + "TP": 10744, + "n_pred": 13578, + "n_ref": 11060 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8446796338672768, + "FN": 2076, + "FP": 96, + "IoU": 0.7311215647437485, + "TN": 11122, + "TP": 5906, + "n_pred": 6002, + "n_ref": 7982 + }, + "2": { + "Dice": 0.8227272727272728, + "FN": 255, + "FP": 447, + "IoU": 0.6988416988416989, + "TN": 16869, + "TP": 1629, + "n_pred": 2076, + "n_ref": 1884 + }, + "3": { + "Dice": 0.9264305177111717, + "FN": 78, + "FP": 192, + "IoU": 0.8629441624365483, + "TN": 17230, + "TP": 1700, + "n_pred": 1892, + "n_ref": 1778 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9094966526159187, + "FN": 364, + "FP": 731, + "IoU": 0.8340154615734425, + "TN": 12603, + "TP": 5502, + "n_pred": 6233, + "n_ref": 5866 + }, + "2": { + "Dice": 0.8813319164009918, + "FN": 330, + "FP": 340, + "IoU": 0.7878404053198227, + "TN": 16042, + "TP": 2488, + "n_pred": 2828, + "n_ref": 2818 + }, + "3": { + "Dice": 0.9602507479697963, + "FN": 128, + "FP": 151, + "IoU": 0.9235406960811181, + "TN": 15551, + "TP": 3370, + "n_pred": 3521, + "n_ref": 3498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.952529994783516, + "FN": 318, + "FP": 137, + "IoU": 0.9093625498007968, + "TN": 7780, + "TP": 4565, + "n_pred": 4702, + "n_ref": 4883 + }, + "2": { + "Dice": 0.8912679826028772, + "FN": 207, + "FP": 118, + "IoU": 0.803862401931201, + "TN": 11143, + "TP": 1332, + "n_pred": 1450, + "n_ref": 1539 + }, + "3": { + "Dice": 0.978125, + "FN": 72, + "FP": 40, + "IoU": 0.9571865443425076, + "TN": 10184, + "TP": 2504, + "n_pred": 2544, + "n_ref": 2576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8791786865772951, + "FN": 1315, + "FP": 109, + "IoU": 0.7844057532172597, + "TN": 25395, + "TP": 5181, + "n_pred": 5290, + "n_ref": 6496 + }, + "2": { + "Dice": 0.9022431459429521, + "FN": 486, + "FP": 220, + "IoU": 0.8218970736629667, + "TN": 28036, + "TP": 3258, + "n_pred": 3478, + "n_ref": 3744 + }, + "3": { + "Dice": 0.959929546455306, + "FN": 144, + "FP": 129, + "IoU": 0.9229466553767993, + "TN": 28457, + "TP": 3270, + "n_pred": 3399, + "n_ref": 3414 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9769788710186061, + "FN": 67, + "FP": 6, + "IoU": 0.9549938347718866, + "TN": 4778, + "TP": 1549, + "n_pred": 1555, + "n_ref": 1616 + }, + "2": { + "Dice": 0.8578584846587352, + "FN": 41, + "FP": 186, + "IoU": 0.7510964912280702, + "TN": 5488, + "TP": 685, + "n_pred": 871, + "n_ref": 726 + }, + "3": { + "Dice": 0.8565205554043016, + "FN": 85, + "FP": 442, + "IoU": 0.7490476190476191, + "TN": 4300, + "TP": 1573, + "n_pred": 2015, + "n_ref": 1658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 67, + "IoU": 0.0, + "TN": 19133, + "TP": 0, + "n_pred": 67, + "n_ref": 0 + }, + "2": { + "Dice": 0.8556005398110661, + "FN": 93, + "FP": 14, + "IoU": 0.7476415094339622, + "TN": 18776, + "TP": 317, + "n_pred": 331, + "n_ref": 410 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8440202803459589, + "FN": 177, + "FP": 346, + "IoU": 0.7301341589267286, + "TN": 17262, + "TP": 1415, + "n_pred": 1761, + "n_ref": 1592 + }, + "2": { + "Dice": 0.8499413833528722, + "FN": 338, + "FP": 174, + "IoU": 0.7390417940876657, + "TN": 17238, + "TP": 1450, + "n_pred": 1624, + "n_ref": 1788 + }, + "3": { + "Dice": 0.8567741935483871, + "FN": 104, + "FP": 118, + "IoU": 0.7494356659142212, + "TN": 18314, + "TP": 664, + "n_pred": 782, + "n_ref": 768 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.738544474393531, + "FN": 303, + "FP": 1928, + "IoU": 0.5854700854700855, + "TN": 26618, + "TP": 3151, + "n_pred": 5079, + "n_ref": 3454 + }, + "2": { + "Dice": 0.8502785515320335, + "FN": 617, + "FP": 673, + "IoU": 0.7395517867958813, + "TN": 27047, + "TP": 3663, + "n_pred": 4336, + "n_ref": 4280 + }, + "3": { + "Dice": 0.9311106204460146, + "FN": 149, + "FP": 475, + "IoU": 0.8711010121875645, + "TN": 27159, + "TP": 4217, + "n_pred": 4692, + "n_ref": 4366 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.95351707116413, + "FN": 204, + "FP": 22, + "IoU": 0.9111635220125787, + "TN": 10256, + "TP": 2318, + "n_pred": 2340, + "n_ref": 2522 + }, + "2": { + "Dice": 0.9115401885945218, + "FN": 29, + "FP": 168, + "IoU": 0.8374587458745875, + "TN": 11588, + "TP": 1015, + "n_pred": 1183, + "n_ref": 1044 + }, + "3": { + "Dice": 0.9297297297297298, + "FN": 88, + "FP": 3, + "IoU": 0.8686868686868687, + "TN": 12107, + "TP": 602, + "n_pred": 605, + "n_ref": 690 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6968369829683698, + "FN": 610, + "FP": 13, + "IoU": 0.5347274085138163, + "TN": 11461, + "TP": 716, + "n_pred": 729, + "n_ref": 1326 + }, + "2": { + "Dice": 0.8615015426808365, + "FN": 369, + "FP": 439, + "IoU": 0.7566997892201144, + "TN": 9479, + "TP": 2513, + "n_pred": 2952, + "n_ref": 2882 + }, + "3": { + "Dice": 0.8981998758535071, + "FN": 604, + "FP": 52, + "IoU": 0.8152112676056338, + "TN": 9250, + "TP": 2894, + "n_pred": 2946, + "n_ref": 3498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.32275489534098584, + "FN": 47, + "FP": 956, + "IoU": 0.19243156199677938, + "TN": 30758, + "TP": 239, + "n_pred": 1195, + "n_ref": 286 + }, + "2": { + "Dice": 0.8917921045157625, + "FN": 190, + "FP": 191, + "IoU": 0.8047155304971809, + "TN": 30049, + "TP": 1570, + "n_pred": 1761, + "n_ref": 1760 + }, + "3": { + "Dice": 0.982031536486982, + "FN": 97, + "FP": 50, + "IoU": 0.9646974063400576, + "TN": 27836, + "TP": 4017, + "n_pred": 4067, + "n_ref": 4114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7317854283426741, + "FN": 16, + "FP": 654, + "IoU": 0.577020202020202, + "TN": 11216, + "TP": 914, + "n_pred": 1568, + "n_ref": 930 + }, + "2": { + "Dice": 0.8652447891420262, + "FN": 423, + "FP": 133, + "IoU": 0.7624946604015378, + "TN": 10459, + "TP": 1785, + "n_pred": 1918, + "n_ref": 2208 + }, + "3": { + "Dice": 0.9573014517506405, + "FN": 152, + "FP": 48, + "IoU": 0.9180999180999181, + "TN": 10358, + "TP": 2242, + "n_pred": 2290, + "n_ref": 2394 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9653465346534653, + "FN": 18, + "FP": 94, + "IoU": 0.9330143540669856, + "TN": 11128, + "TP": 1560, + "n_pred": 1654, + "n_ref": 1578 + }, + "2": { + "Dice": 0.9182242990654206, + "FN": 25, + "FP": 45, + "IoU": 0.8488120950323974, + "TN": 12337, + "TP": 393, + "n_pred": 438, + "n_ref": 418 + }, + "3": { + "Dice": 0.9655813953488372, + "FN": 35, + "FP": 2, + "IoU": 0.9334532374100719, + "TN": 12244, + "TP": 519, + "n_pred": 521, + "n_ref": 554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9779919678714859, + "FN": 214, + "FP": 60, + "IoU": 0.9569317824583464, + "TN": 19238, + "TP": 6088, + "n_pred": 6148, + "n_ref": 6302 + }, + "2": { + "Dice": 0.8849938499384994, + "FN": 190, + "FP": 184, + "IoU": 0.7937120794263651, + "TN": 23787, + "TP": 1439, + "n_pred": 1623, + "n_ref": 1629 + }, + "3": { + "Dice": 0.9618933012434817, + "FN": 72, + "FP": 118, + "IoU": 0.9265842349304482, + "TN": 23012, + "TP": 2398, + "n_pred": 2516, + "n_ref": 2470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7799070847851336, + "FN": 189, + "FP": 2085, + "IoU": 0.6392194193241314, + "TN": 6497, + "TP": 4029, + "n_pred": 6114, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8570131638674535, + "FN": 135, + "FP": 180, + "IoU": 0.749801429706116, + "TN": 11541, + "TP": 944, + "n_pred": 1124, + "n_ref": 1079 + }, + "3": { + "Dice": 0.9165097300690521, + "FN": 121, + "FP": 12, + "IoU": 0.8458864426419467, + "TN": 11937, + "TP": 730, + "n_pred": 742, + "n_ref": 851 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9429945054945055, + "FN": 32, + "FP": 134, + "IoU": 0.8921377517868746, + "TN": 11261, + "TP": 1373, + "n_pred": 1507, + "n_ref": 1405 + }, + "2": { + "Dice": 0.8950652297220647, + "FN": 73, + "FP": 112, + "IoU": 0.8100616016427105, + "TN": 11826, + "TP": 789, + "n_pred": 901, + "n_ref": 862 + }, + "3": { + "Dice": 0.9519071310116086, + "FN": 63, + "FP": 24, + "IoU": 0.9082278481012658, + "TN": 11852, + "TP": 861, + "n_pred": 885, + "n_ref": 924 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9598912304554724, + "FN": 8, + "FP": 110, + "IoU": 0.9228758169934641, + "TN": 11270, + "TP": 1412, + "n_pred": 1522, + "n_ref": 1420 + }, + "2": { + "Dice": 0.9331823329558324, + "FN": 68, + "FP": 50, + "IoU": 0.8747346072186837, + "TN": 11858, + "TP": 824, + "n_pred": 874, + "n_ref": 892 + }, + "3": { + "Dice": 0.9637814610190301, + "FN": 49, + "FP": 10, + "IoU": 0.9300947867298578, + "TN": 11956, + "TP": 785, + "n_pred": 795, + "n_ref": 834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8222062263811409, + "FN": 1951, + "FP": 25, + "IoU": 0.6980901451489687, + "TN": 6255, + "TP": 4569, + "n_pred": 4594, + "n_ref": 6520 + }, + "2": { + "Dice": 0.8717156105100463, + "FN": 184, + "FP": 148, + "IoU": 0.7726027397260274, + "TN": 11340, + "TP": 1128, + "n_pred": 1276, + "n_ref": 1312 + }, + "3": { + "Dice": 0.9345955249569707, + "FN": 74, + "FP": 78, + "IoU": 0.877221324717286, + "TN": 11562, + "TP": 1086, + "n_pred": 1164, + "n_ref": 1160 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9267771245323356, + "FN": 102, + "FP": 35, + "IoU": 0.8635458167330677, + "TN": 5396, + "TP": 867, + "n_pred": 902, + "n_ref": 969 + }, + "3": { + "Dice": 0.9827396254131473, + "FN": 27, + "FP": 20, + "IoU": 0.9660649819494584, + "TN": 5015, + "TP": 1338, + "n_pred": 1358, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9171058936272161, + "FN": 259, + "FP": 606, + "IoU": 0.8469026548672567, + "TN": 19950, + "TP": 4785, + "n_pred": 5391, + "n_ref": 5044 + }, + "2": { + "Dice": 0.8283822138126774, + "FN": 637, + "FP": 270, + "IoU": 0.7070413436692506, + "TN": 22504, + "TP": 2189, + "n_pred": 2459, + "n_ref": 2826 + }, + "3": { + "Dice": 0.9545524100994645, + "FN": 386, + "FP": 208, + "IoU": 0.913056206088993, + "TN": 18768, + "TP": 6238, + "n_pred": 6446, + "n_ref": 6624 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9838894085853861, + "FN": 285, + "FP": 180, + "IoU": 0.9682896890343698, + "TN": 10936, + "TP": 14199, + "n_pred": 14379, + "n_ref": 14484 + }, + "2": { + "Dice": 0.9369175627240144, + "FN": 77, + "FP": 99, + "IoU": 0.8813216453135536, + "TN": 24117, + "TP": 1307, + "n_pred": 1406, + "n_ref": 1384 + }, + "3": { + "Dice": 0.9454949944382648, + "FN": 15, + "FP": 34, + "IoU": 0.8966244725738397, + "TN": 25126, + "TP": 425, + "n_pred": 459, + "n_ref": 440 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9558028616852147, + "FN": 65, + "FP": 74, + "IoU": 0.915347137637028, + "TN": 11158, + "TP": 1503, + "n_pred": 1577, + "n_ref": 1568 + }, + "2": { + "Dice": 0.8779453345900095, + "FN": 133, + "FP": 385, + "IoU": 0.7824443511129777, + "TN": 10419, + "TP": 1863, + "n_pred": 2248, + "n_ref": 1996 + }, + "3": { + "Dice": 0.9613615455381784, + "FN": 243, + "FP": 9, + "IoU": 0.9255978742249779, + "TN": 9413, + "TP": 3135, + "n_pred": 3144, + "n_ref": 3378 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8209028459273798, + "FN": 2694, + "FP": 226, + "IoU": 0.6962130669995839, + "TN": 15988, + "TP": 6692, + "n_pred": 6918, + "n_ref": 9386 + }, + "2": { + "Dice": 0.7658788774002954, + "FN": 419, + "FP": 215, + "IoU": 0.6205864751645721, + "TN": 23929, + "TP": 1037, + "n_pred": 1252, + "n_ref": 1456 + }, + "3": { + "Dice": 0.8984666390385412, + "FN": 130, + "FP": 115, + "IoU": 0.8156508653122648, + "TN": 24271, + "TP": 1084, + "n_pred": 1199, + "n_ref": 1214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8735968765251342, + "FN": 251, + "FP": 8, + "IoU": 0.7755632582322357, + "TN": 5246, + "TP": 895, + "n_pred": 903, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7536997885835095, + "FN": 78, + "FP": 388, + "IoU": 0.6047497879558948, + "TN": 5221, + "TP": 713, + "n_pred": 1101, + "n_ref": 791 + }, + "3": { + "Dice": 0.762167759751467, + "FN": 205, + "FP": 484, + "IoU": 0.6157278304517568, + "TN": 4607, + "TP": 1104, + "n_pred": 1588, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9669091762497066, + "FN": 190, + "FP": 92, + "IoU": 0.9359382099045889, + "TN": 8398, + "TP": 4120, + "n_pred": 4212, + "n_ref": 4310 + }, + "2": { + "Dice": 0.8949120304327152, + "FN": 76, + "FP": 145, + "IoU": 0.8098106712564543, + "TN": 11638, + "TP": 941, + "n_pred": 1086, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9783586886650953, + "FN": 88, + "FP": 13, + "IoU": 0.9576342281879194, + "TN": 10416, + "TP": 2283, + "n_pred": 2296, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9187434797728063, + "FN": 445, + "FP": 256, + "IoU": 0.8496998284734134, + "TN": 8136, + "TP": 3963, + "n_pred": 4219, + "n_ref": 4408 + }, + "2": { + "Dice": 0.8747913188647746, + "FN": 297, + "FP": 228, + "IoU": 0.7774480712166172, + "TN": 10441, + "TP": 1834, + "n_pred": 2062, + "n_ref": 2131 + }, + "3": { + "Dice": 0.9244011976047904, + "FN": 89, + "FP": 113, + "IoU": 0.8594293667362561, + "TN": 11363, + "TP": 1235, + "n_pred": 1348, + "n_ref": 1324 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.697973970213337, + "FN": 2177, + "FP": 74, + "IoU": 0.5360676009892827, + "TN": 20748, + "TP": 2601, + "n_pred": 2675, + "n_ref": 4778 + }, + "2": { + "Dice": 0.9351851851851852, + "FN": 94, + "FP": 46, + "IoU": 0.8782608695652174, + "TN": 24450, + "TP": 1010, + "n_pred": 1056, + "n_ref": 1104 + }, + "3": { + "Dice": 0.9773056494447127, + "FN": 30, + "FP": 17, + "IoU": 0.95561850802644, + "TN": 24541, + "TP": 1012, + "n_pred": 1029, + "n_ref": 1042 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2911164/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8847179806236539, + "FN": 293.327969348659, + "FP": 277.5905747126437, + "IoU": 0.8063926928194487, + "TN": 14776.409195402299, + "TP": 2413.7757088122607, + "n_pred": 2691.3662835249042, + "n_ref": 2707.103678160919 + }, + "mean": { + "1": { + "Dice": 0.850774778179094, + "FN": 434.9914942528736, + "FP": 342.5956321839081, + "IoU": 0.7639740073110541, + "TN": 14111.289885057471, + "TP": 2872.2264367816088, + "n_pred": 3214.8220689655172, + "n_ref": 3307.2179310344827 + }, + "2": { + "Dice": 0.8793919160499357, + "FN": 278.29793103448276, + "FP": 310.35862068965514, + "IoU": 0.7890993008478023, + "TN": 15084.294482758622, + "TP": 2088.1524137931037, + "n_pred": 2398.5110344827585, + "n_ref": 2366.450344827586 + }, + "3": { + "Dice": 0.9239872476419324, + "FN": 166.6944827586207, + "FP": 179.81747126436778, + "IoU": 0.86610477029949, + "TN": 15133.643218390804, + "TP": 2280.948275862069, + "n_pred": 2460.765747126437, + "n_ref": 2447.6427586206896 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_008/summary.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_008/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..e3c5fc9c79c60385b6abdb79f0e9d37b583d23dd --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_008/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.9044381941790133, + "FN": 805.1999999999999, + "FP": 843.6, + "IoU": 0.8315381131436551, + "TN": 843390.9266666666, + "TP": 9388.913333333332, + "n_pred": 10232.513333333334, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.8926843639929102, + "FN": 898.16, + "FP": 865.72, + "IoU": 0.8121901834783648, + "TN": 843708.86, + "TP": 8955.9, + "n_pred": 9821.62, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.87934244533166, + "FN": 1114.3, + "FP": 1107.58, + "IoU": 0.7883508609568698, + "TN": 843265.56, + "TP": 8941.2, + "n_pred": 10048.78, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9412877732124697, + "FN": 403.14, + "FP": 557.5, + "IoU": 0.8940732949957308, + "TN": 843198.36, + "TP": 10269.64, + "n_pred": 10827.14, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9338427853861675, + "FN": 570, + "FP": 971, + "IoU": 0.8758959491020375, + "TN": 1093503, + "TP": 10876, + "n_pred": 11847, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8600749535918182, + "FN": 1178, + "FP": 2817, + "IoU": 0.7545013212069072, + "TN": 1089647, + "TP": 12278, + "n_pred": 15095, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9480842527582748, + "FN": 577, + "FP": 2011, + "IoU": 0.9012929554902933, + "TN": 1079701, + "TP": 23631, + "n_pred": 25642, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8680843395206344, + "FN": 61, + "FP": 1403, + "IoU": 0.7669160961630314, + "TN": 1099639, + "TP": 4817, + "n_pred": 6220, + "n_ref": 4878 + }, + "2": { + "Dice": 0.896250316696225, + "FN": 1830, + "FP": 1446, + "IoU": 0.8120050499253988, + "TN": 1088494, + "TP": 14150, + "n_pred": 15596, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9421118925160071, + "FN": 531, + "FP": 1675, + "IoU": 0.8905591109788162, + "TN": 1085763, + "TP": 17951, + "n_pred": 19626, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9177051493063719, + "FN": 1064, + "FP": 336, + "IoU": 0.8479252661307842, + "TN": 900234, + "TP": 7806, + "n_pred": 8142, + "n_ref": 8870 + }, + "2": { + "Dice": 0.9017870439314967, + "FN": 1675, + "FP": 963, + "IoU": 0.8211404162994101, + "TN": 894691, + "TP": 12111, + "n_pred": 13074, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9756937175819319, + "FN": 438, + "FP": 607, + "IoU": 0.9525409873291248, + "TN": 887421, + "TP": 20974, + "n_pred": 21581, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7546363558670199, + "FN": 2563, + "FP": 308, + "IoU": 0.6059566291517979, + "TN": 902154, + "TP": 4415, + "n_pred": 4723, + "n_ref": 6978 + }, + "2": { + "Dice": 0.9044487427466151, + "FN": 1465, + "FP": 1252, + "IoU": 0.8255649717514124, + "TN": 893864, + "TP": 12859, + "n_pred": 14111, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9735475363956837, + "FN": 545, + "FP": 438, + "IoU": 0.9484584731543624, + "TN": 890368, + "TP": 18089, + "n_pred": 18527, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9555715251944539, + "FN": 1573, + "FP": 529, + "IoU": 0.9149228963451653, + "TN": 1401053, + "TP": 22605, + "n_pred": 23134, + "n_ref": 24178 + }, + "2": { + "Dice": 0.9043767681810617, + "FN": 1498, + "FP": 1375, + "IoU": 0.8254450452639893, + "TN": 1409301, + "TP": 13586, + "n_pred": 14961, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9776685669353253, + "FN": 409, + "FP": 727, + "IoU": 0.9563127331461755, + "TN": 1399757, + "TP": 24867, + "n_pred": 25594, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9563418860752417, + "FN": 442, + "FP": 1120, + "IoU": 0.9163363685056239, + "TN": 1407090, + "TP": 17108, + "n_pred": 18228, + "n_ref": 17550 + }, + "2": { + "Dice": 0.9033529276542642, + "FN": 1314, + "FP": 1629, + "IoU": 0.8237407917589986, + "TN": 1409063, + "TP": 13754, + "n_pred": 15383, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9730565371024735, + "FN": 670, + "FP": 550, + "IoU": 0.9475268817204301, + "TN": 1402510, + "TP": 22030, + "n_pred": 22580, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9510011395083835, + "FN": 495, + "FP": 408, + "IoU": 0.9065797641216635, + "TN": 752382, + "TP": 8763, + "n_pred": 9171, + "n_ref": 9258 + }, + "2": { + "Dice": 0.874211541469009, + "FN": 1025, + "FP": 1388, + "IoU": 0.7765326912391184, + "TN": 751250, + "TP": 8385, + "n_pred": 9773, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9721875, + "FN": 461, + "FP": 429, + "IoU": 0.9458802067497719, + "TN": 745603, + "TP": 15555, + "n_pred": 15984, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8329485834207765, + "FN": 949, + "FP": 643, + "IoU": 0.7137205538572199, + "TN": 756487, + "TP": 3969, + "n_pred": 4612, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8589228852277447, + "FN": 1932, + "FP": 1125, + "IoU": 0.752729919922349, + "TN": 749685, + "TP": 9306, + "n_pred": 10431, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9534028203556101, + "FN": 1027, + "FP": 37, + "IoU": 0.9109548916227299, + "TN": 750099, + "TP": 10885, + "n_pred": 10922, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9663610770230275, + "FN": 457, + "FP": 475, + "IoU": 0.9349116558418884, + "TN": 1063953, + "TP": 13387, + "n_pred": 13862, + "n_ref": 13844 + }, + "2": { + "Dice": 0.8895432940690225, + "FN": 1261, + "FP": 877, + "IoU": 0.8010607611426445, + "TN": 1067525, + "TP": 8609, + "n_pred": 9486, + "n_ref": 9870 + }, + "3": { + "Dice": 0.9755949924336222, + "FN": 675, + "FP": 212, + "IoU": 0.9523528147829824, + "TN": 1059656, + "TP": 17729, + "n_pred": 17941, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9566466536520682, + "FN": 310, + "FP": 867, + "IoU": 0.9168961378239073, + "TN": 1064109, + "TP": 12986, + "n_pred": 13853, + "n_ref": 13296 + }, + "2": { + "Dice": 0.8674249852912336, + "FN": 1954, + "FP": 750, + "IoU": 0.7658874458874458, + "TN": 1066722, + "TP": 8846, + "n_pred": 9596, + "n_ref": 10800 + }, + "3": { + "Dice": 0.9601285330185586, + "FN": 585, + "FP": 631, + "IoU": 0.9233146244560761, + "TN": 1062415, + "TP": 14641, + "n_pred": 15272, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9443009545199326, + "FN": 723, + "FP": 269, + "IoU": 0.8944793107116265, + "TN": 1096519, + "TP": 8409, + "n_pred": 8678, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8780003310710147, + "FN": 874, + "FP": 2074, + "IoU": 0.7825317202714666, + "TN": 1092364, + "TP": 10608, + "n_pred": 12682, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9154051647373108, + "FN": 702, + "FP": 1293, + "IoU": 0.8440065681444991, + "TN": 1093131, + "TP": 10794, + "n_pred": 12087, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8708539167254764, + "FN": 584, + "FP": 148, + "IoU": 0.77125, + "TN": 1102720, + "TP": 2468, + "n_pred": 2616, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8771877560140017, + "FN": 574, + "FP": 2724, + "IoU": 0.7812417086760414, + "TN": 1090844, + "TP": 11778, + "n_pred": 14502, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7901369863013699, + "FN": 396, + "FP": 1136, + "IoU": 0.6530797101449275, + "TN": 1101504, + "TP": 2884, + "n_pred": 4020, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9038005437612079, + "FN": 1352, + "FP": 311, + "IoU": 0.8244854881266491, + "TN": 1137405, + "TP": 7812, + "n_pred": 8123, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9227532006591457, + "FN": 1217, + "FP": 1830, + "IoU": 0.8565847688976749, + "TN": 1125634, + "TP": 18199, + "n_pred": 20029, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9370288055083453, + "FN": 1179, + "FP": 266, + "IoU": 0.8815185306657921, + "TN": 1134684, + "TP": 10751, + "n_pred": 11017, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7268351383874849, + "FN": 956, + "FP": 179, + "IoU": 0.5708884688090737, + "TN": 1144235, + "TP": 1510, + "n_pred": 1689, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8584676904751776, + "FN": 4256, + "FP": 2398, + "IoU": 0.7520310054408587, + "TN": 1120046, + "TP": 20180, + "n_pred": 22578, + "n_ref": 24436 + }, + "3": { + "Dice": 0.5830969937606353, + "FN": 146, + "FP": 3529, + "IoU": 0.41152922337870296, + "TN": 1140635, + "TP": 2570, + "n_pred": 6099, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9521702127659575, + "FN": 658, + "FP": 466, + "IoU": 0.9087069525666017, + "TN": 788488, + "TP": 11188, + "n_pred": 11654, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8903874728540404, + "FN": 844, + "FP": 1074, + "IoU": 0.8024309847548413, + "TN": 791092, + "TP": 7790, + "n_pred": 8864, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9582199076813824, + "FN": 557, + "FP": 149, + "IoU": 0.9197909566007726, + "TN": 791998, + "TP": 8096, + "n_pred": 8245, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8648308814283918, + "FN": 500, + "FP": 575, + "IoU": 0.7618520159503767, + "TN": 796286, + "TP": 3439, + "n_pred": 4014, + "n_ref": 3939 + }, + "2": { + "Dice": 0.918827915180182, + "FN": 1191, + "FP": 834, + "IoU": 0.8498442829601067, + "TN": 787314, + "TP": 11461, + "n_pred": 12295, + "n_ref": 12652 + }, + "3": { + "Dice": 0.9015473558918551, + "FN": 195, + "FP": 384, + "IoU": 0.8207430340557276, + "TN": 797570, + "TP": 2651, + "n_pred": 3035, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9531004307103302, + "FN": 251, + "FP": 1121, + "IoU": 0.9104029256187554, + "TN": 1332527, + "TP": 13941, + "n_pred": 15062, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8936250117359872, + "FN": 1088, + "FP": 1178, + "IoU": 0.8077053632043448, + "TN": 1336056, + "TP": 9518, + "n_pred": 10696, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9742062344572321, + "FN": 483, + "FP": 409, + "IoU": 0.9497096465016632, + "TN": 1330103, + "TP": 16845, + "n_pred": 17254, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7813204069092647, + "FN": 146, + "FP": 3057, + "IoU": 0.6411204481792717, + "TN": 1338915, + "TP": 5722, + "n_pred": 8779, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8897391021205584, + "FN": 1184, + "FP": 1525, + "IoU": 0.801378400175966, + "TN": 1334201, + "TP": 10930, + "n_pred": 12455, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9603687429999138, + "FN": 471, + "FP": 449, + "IoU": 0.923759012181984, + "TN": 1335773, + "TP": 11147, + "n_pred": 11596, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8525827045850262, + "FN": 710, + "FP": 3354, + "IoU": 0.7430450177035913, + "TN": 836152, + "TP": 11752, + "n_pred": 15106, + "n_ref": 12462 + }, + "2": { + "Dice": 0.8670218322364985, + "FN": 1148, + "FP": 1398, + "IoU": 0.765259081689102, + "TN": 841122, + "TP": 8300, + "n_pred": 9698, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9742478810690784, + "FN": 499, + "FP": 452, + "IoU": 0.9497888067581838, + "TN": 833028, + "TP": 17989, + "n_pred": 18441, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9049480126834304, + "FN": 802, + "FP": 487, + "IoU": 0.8263973063973064, + "TN": 844543, + "TP": 6136, + "n_pred": 6623, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8845166809238666, + "FN": 1469, + "FP": 1096, + "IoU": 0.7929447852760736, + "TN": 839580, + "TP": 9823, + "n_pred": 10919, + "n_ref": 11292 + }, + "3": { + "Dice": 0.963020030816641, + "FN": 496, + "FP": 464, + "IoU": 0.9286775631500743, + "TN": 838508, + "TP": 12500, + "n_pred": 12964, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8845243314335818, + "FN": 812, + "FP": 505, + "IoU": 0.7929570822197768, + "TN": 845607, + "TP": 5044, + "n_pred": 5549, + "n_ref": 5856 + }, + "2": { + "Dice": 0.883088436615862, + "FN": 1044, + "FP": 1518, + "IoU": 0.7906520673312633, + "TN": 839730, + "TP": 9676, + "n_pred": 11194, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9511234837939948, + "FN": 998, + "FP": 231, + "IoU": 0.9068021536361568, + "TN": 838781, + "TP": 11958, + "n_pred": 12189, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9023364485981309, + "FN": 173, + "FP": 245, + "IoU": 0.8220519369944658, + "TN": 849619, + "TP": 1931, + "n_pred": 2176, + "n_ref": 2104 + }, + "2": { + "Dice": 0.910337678906032, + "FN": 1169, + "FP": 1080, + "IoU": 0.8354309966339821, + "TN": 838302, + "TP": 11417, + "n_pred": 12497, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9496329757199322, + "FN": 337, + "FP": 555, + "IoU": 0.9040963337275562, + "TN": 842667, + "TP": 8409, + "n_pred": 8964, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9207059206245933, + "FN": 1767, + "FP": 183, + "IoU": 0.853063069851556, + "TN": 783769, + "TP": 11321, + "n_pred": 11504, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8525019077728115, + "FN": 1034, + "FP": 1672, + "IoU": 0.7429222876686301, + "TN": 786514, + "TP": 7820, + "n_pred": 9492, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9554466641537882, + "FN": 784, + "FP": 398, + "IoU": 0.9146939953810623, + "TN": 783184, + "TP": 12674, + "n_pred": 13072, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8236720466772751, + "FN": 2233, + "FP": 94, + "IoU": 0.7002061324400928, + "TN": 789278, + "TP": 5435, + "n_pred": 5529, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8803178115256964, + "FN": 869, + "FP": 1511, + "IoU": 0.7862211443456391, + "TN": 785907, + "TP": 8753, + "n_pred": 10264, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9455272363818091, + "FN": 518, + "FP": 463, + "IoU": 0.8966824644549763, + "TN": 787545, + "TP": 8514, + "n_pred": 8977, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9254030640891955, + "FN": 931, + "FP": 929, + "IoU": 0.8611629469284168, + "TN": 883273, + "TP": 11537, + "n_pred": 12466, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8849403698517696, + "FN": 1174, + "FP": 1209, + "IoU": 0.7936260500562917, + "TN": 885123, + "TP": 9164, + "n_pred": 10373, + "n_ref": 10338 + }, + "3": { + "Dice": 0.951460980400016, + "FN": 383, + "FP": 828, + "IoU": 0.9074159021406728, + "TN": 883590, + "TP": 11869, + "n_pred": 12697, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7837317503609819, + "FN": 1471, + "FP": 1225, + "IoU": 0.6443740931275558, + "TN": 889089, + "TP": 4885, + "n_pred": 6110, + "n_ref": 6356 + }, + "2": { + "Dice": 0.9101717882589501, + "FN": 1107, + "FP": 948, + "IoU": 0.835151612385689, + "TN": 884204, + "TP": 10411, + "n_pred": 11359, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9541971735058743, + "FN": 420, + "FP": 387, + "IoU": 0.9124063822859003, + "TN": 887457, + "TP": 8406, + "n_pred": 8793, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9624554919547482, + "FN": 543, + "FP": 290, + "IoU": 0.9276281494352737, + "TN": 750538, + "TP": 10677, + "n_pred": 10967, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9420289855072463, + "FN": 662, + "FP": 538, + "IoU": 0.8904109589041096, + "TN": 751098, + "TP": 9750, + "n_pred": 10288, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9795640905807877, + "FN": 224, + "FP": 257, + "IoU": 0.9599467066366891, + "TN": 750039, + "TP": 11528, + "n_pred": 11785, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9107533805537669, + "FN": 256, + "FP": 437, + "IoU": 0.8361314731615039, + "TN": 757819, + "TP": 3536, + "n_pred": 3973, + "n_ref": 3792 + }, + "2": { + "Dice": 0.9264945535637705, + "FN": 830, + "FP": 884, + "IoU": 0.8630552892297859, + "TN": 749532, + "TP": 10802, + "n_pred": 11686, + "n_ref": 11632 + }, + "3": { + "Dice": 0.963006894506635, + "FN": 339, + "FP": 160, + "IoU": 0.9286531312553618, + "TN": 755054, + "TP": 6495, + "n_pred": 6655, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8771019072339465, + "FN": 170, + "FP": 2008, + "IoU": 0.781105527638191, + "TN": 985378, + "TP": 7772, + "n_pred": 9780, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8833652007648184, + "FN": 894, + "FP": 1180, + "IoU": 0.791095890410959, + "TN": 985400, + "TP": 7854, + "n_pred": 9034, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9746520580396801, + "FN": 89, + "FP": 767, + "IoU": 0.9505573846242708, + "TN": 978015, + "TP": 16457, + "n_pred": 17224, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7526315789473684, + "FN": 382, + "FP": 1498, + "IoU": 0.6033755274261603, + "TN": 990588, + "TP": 2860, + "n_pred": 4358, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8644466868483014, + "FN": 624, + "FP": 1794, + "IoU": 0.7612559241706162, + "TN": 985200, + "TP": 7710, + "n_pred": 9504, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9322101529594325, + "FN": 101, + "FP": 1428, + "IoU": 0.8730277362564358, + "TN": 983286, + "TP": 10513, + "n_pred": 11941, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9595991450296086, + "FN": 631, + "FP": 522, + "IoU": 0.922335982756298, + "TN": 743170, + "TP": 13693, + "n_pred": 14215, + "n_ref": 14324 + }, + "2": { + "Dice": 0.9030362389813908, + "FN": 975, + "FP": 708, + "IoU": 0.8232142857142857, + "TN": 748496, + "TP": 7837, + "n_pred": 8545, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9761331289686884, + "FN": 157, + "FP": 388, + "IoU": 0.9533789563729683, + "TN": 746326, + "TP": 11145, + "n_pred": 11533, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8209700427960057, + "FN": 632, + "FP": 1376, + "IoU": 0.6963097398669087, + "TN": 751404, + "TP": 4604, + "n_pred": 5980, + "n_ref": 5236 + }, + "2": { + "Dice": 0.9188022943745724, + "FN": 602, + "FP": 941, + "IoU": 0.8498004477757227, + "TN": 747743, + "TP": 8730, + "n_pred": 9671, + "n_ref": 9332 + }, + "3": { + "Dice": 0.9304838516028334, + "FN": 317, + "FP": 262, + "IoU": 0.8700044903457567, + "TN": 753562, + "TP": 3875, + "n_pred": 4137, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9687322342239909, + "FN": 278, + "FP": 217, + "IoU": 0.9393605292171996, + "TN": 630813, + "TP": 7668, + "n_pred": 7885, + "n_ref": 7946 + }, + "2": { + "Dice": 0.9022999080036799, + "FN": 462, + "FP": 600, + "IoU": 0.8219912839423399, + "TN": 633010, + "TP": 4904, + "n_pred": 5504, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9640842163203522, + "FN": 328, + "FP": 194, + "IoU": 0.9306588735387885, + "TN": 631448, + "TP": 7006, + "n_pred": 7200, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9186028133396554, + "FN": 114, + "FP": 401, + "IoU": 0.8494592224495762, + "TN": 635555, + "TP": 2906, + "n_pred": 3307, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9377703826955075, + "FN": 307, + "FP": 628, + "IoU": 0.8828320802005013, + "TN": 630996, + "TP": 7045, + "n_pred": 7673, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9337436640115858, + "FN": 177, + "FP": 189, + "IoU": 0.8757215619694397, + "TN": 636031, + "TP": 2579, + "n_pred": 2768, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9584157110847502, + "FN": 897, + "FP": 365, + "IoU": 0.9201518506801645, + "TN": 967235, + "TP": 14543, + "n_pred": 14908, + "n_ref": 15440 + }, + "2": { + "Dice": 0.9043096405228758, + "FN": 1041, + "FP": 833, + "IoU": 0.8253332090595582, + "TN": 972311, + "TP": 8855, + "n_pred": 9688, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9700296735905044, + "FN": 142, + "FP": 666, + "IoU": 0.9418035148372227, + "TN": 969156, + "TP": 13076, + "n_pred": 13742, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9495563588563917, + "FN": 409, + "FP": 205, + "IoU": 0.903957453464727, + "TN": 976647, + "TP": 5779, + "n_pred": 5984, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9294058911632551, + "FN": 648, + "FP": 766, + "IoU": 0.868121619100914, + "TN": 972318, + "TP": 9308, + "n_pred": 10074, + "n_ref": 9956 + }, + "3": { + "Dice": 0.9603422741484285, + "FN": 154, + "FP": 328, + "IoU": 0.9237100348211459, + "TN": 976722, + "TP": 5836, + "n_pred": 6164, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9644345736103928, + "FN": 330, + "FP": 839, + "IoU": 0.9313120629884247, + "TN": 1031557, + "TP": 15850, + "n_pred": 16689, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8985040276179517, + "FN": 900, + "FP": 864, + "IoU": 0.8157124947764313, + "TN": 1039004, + "TP": 7808, + "n_pred": 8672, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9676747446424995, + "FN": 181, + "FP": 626, + "IoU": 0.9373738941486885, + "TN": 1035690, + "TP": 12079, + "n_pred": 12705, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9232789345338586, + "FN": 508, + "FP": 310, + "IoU": 0.8574912891986063, + "TN": 1042836, + "TP": 4922, + "n_pred": 5232, + "n_ref": 5430 + }, + "2": { + "Dice": 0.9171583667689402, + "FN": 607, + "FP": 1148, + "IoU": 0.8469921534437663, + "TN": 1037106, + "TP": 9715, + "n_pred": 10863, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9557401074743527, + "FN": 189, + "FP": 264, + "IoU": 0.9152320359281437, + "TN": 1043232, + "TP": 4891, + "n_pred": 5155, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9082134746404239, + "FN": 1564, + "FP": 376, + "IoU": 0.8318599410643093, + "TN": 477678, + "TP": 9598, + "n_pred": 9974, + "n_ref": 11162 + }, + "2": { + "Dice": 0.818983768525053, + "FN": 396, + "FP": 630, + "IoU": 0.693456827009262, + "TN": 485869, + "TP": 2321, + "n_pred": 2951, + "n_ref": 2717 + }, + "3": { + "Dice": 0.964570699010533, + "FN": 118, + "FP": 215, + "IoU": 0.9315659679408138, + "TN": 484350, + "TP": 4533, + "n_pred": 4748, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8507525435129908, + "FN": 1592, + "FP": 183, + "IoU": 0.7402692420251683, + "TN": 482382, + "TP": 5059, + "n_pred": 5242, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8775097276264592, + "FN": 541, + "FP": 246, + "IoU": 0.7817526344980588, + "TN": 485610, + "TP": 2819, + "n_pred": 3065, + "n_ref": 3360 + }, + "3": { + "Dice": 0.9093851132686084, + "FN": 104, + "FP": 232, + "IoU": 0.8338278931750742, + "TN": 487194, + "TP": 1686, + "n_pred": 1918, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9157629255989912, + "FN": 1352, + "FP": 1320, + "IoU": 0.8446150267504071, + "TN": 463284, + "TP": 14524, + "n_pred": 15844, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8263169028982441, + "FN": 613, + "FP": 1029, + "IoU": 0.7040374909877434, + "TN": 474932, + "TP": 3906, + "n_pred": 4935, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9550028752156412, + "FN": 317, + "FP": 309, + "IoU": 0.9138808639427707, + "TN": 473211, + "TP": 6643, + "n_pred": 6952, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9242867753069159, + "FN": 1033, + "FP": 700, + "IoU": 0.8592315815124685, + "TN": 468169, + "TP": 10578, + "n_pred": 11278, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8698939603503919, + "FN": 945, + "FP": 466, + "IoU": 0.7697454308093995, + "TN": 474352, + "TP": 4717, + "n_pred": 5183, + "n_ref": 5662 + }, + "3": { + "Dice": 0.9067513368983957, + "FN": 93, + "FP": 465, + "IoU": 0.8294099663711403, + "TN": 477209, + "TP": 2713, + "n_pred": 3178, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9281982997029602, + "FN": 2548, + "FP": 256, + "IoU": 0.8660168195718655, + "TN": 623712, + "TP": 18124, + "n_pred": 18380, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8534256519068625, + "FN": 1424, + "FP": 1201, + "IoU": 0.7443264829063991, + "TN": 634373, + "TP": 7642, + "n_pred": 8843, + "n_ref": 9066 + }, + "3": { + "Dice": 0.967369459568093, + "FN": 761, + "FP": 132, + "IoU": 0.9368011323425336, + "TN": 630510, + "TP": 13237, + "n_pred": 13369, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8481824142201501, + "FN": 3689, + "FP": 479, + "IoU": 0.7363860603377396, + "TN": 628829, + "TP": 11643, + "n_pred": 12122, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8864912280701754, + "FN": 2060, + "FP": 528, + "IoU": 0.7961241531432173, + "TN": 631946, + "TP": 10106, + "n_pred": 10634, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9366627649889453, + "FN": 360, + "FP": 614, + "IoU": 0.8808708414872799, + "TN": 636464, + "TP": 7202, + "n_pred": 7816, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9221263543482578, + "FN": 1158, + "FP": 2371, + "IoU": 0.85550505670884, + "TN": 540057, + "TP": 20894, + "n_pred": 23265, + "n_ref": 22052 + }, + "2": { + "Dice": 0.8064073226544622, + "FN": 945, + "FP": 747, + "IoU": 0.6756134969325154, + "TN": 559264, + "TP": 3524, + "n_pred": 4271, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9562104455667072, + "FN": 418, + "FP": 267, + "IoU": 0.91609505144537, + "TN": 556316, + "TP": 7479, + "n_pred": 7746, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7512138839478871, + "FN": 619, + "FP": 4556, + "IoU": 0.6015552817985833, + "TN": 551492, + "TP": 7813, + "n_pred": 12369, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8807621389059619, + "FN": 564, + "FP": 600, + "IoU": 0.7869302580999451, + "TN": 559017, + "TP": 4299, + "n_pred": 4899, + "n_ref": 4863 + }, + "3": { + "Dice": 0.9475963620614984, + "FN": 170, + "FP": 193, + "IoU": 0.9004115226337449, + "TN": 560835, + "TP": 3282, + "n_pred": 3475, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8880261292906884, + "FN": 370, + "FP": 1447, + "IoU": 0.7986034138771891, + "TN": 409858, + "TP": 7205, + "n_pred": 8652, + "n_ref": 7575 + }, + "2": { + "Dice": 0.6734955185659411, + "FN": 1278, + "FP": 252, + "IoU": 0.5077220077220077, + "TN": 415772, + "TP": 1578, + "n_pred": 1830, + "n_ref": 2856 + }, + "3": { + "Dice": 0.9153997911105953, + "FN": 255, + "FP": 474, + "IoU": 0.8439974320564948, + "TN": 414207, + "TP": 3944, + "n_pred": 4418, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8052588331963846, + "FN": 327, + "FP": 1806, + "IoU": 0.6740027510316369, + "TN": 412337, + "TP": 4410, + "n_pred": 6216, + "n_ref": 4737 + }, + "2": { + "Dice": 0.6362865621025858, + "FN": 1492, + "FP": 224, + "IoU": 0.46658377370220705, + "TN": 415663, + "TP": 1501, + "n_pred": 1725, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8656187735222493, + "FN": 428, + "FP": 179, + "IoU": 0.7630757220921155, + "TN": 416318, + "TP": 1955, + "n_pred": 2134, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9659496901203062, + "FN": 318, + "FP": 616, + "IoU": 0.934141869976026, + "TN": 482328, + "TP": 13248, + "n_pred": 13864, + "n_ref": 13566 + }, + "2": { + "Dice": 0.9250131095962244, + "FN": 616, + "FP": 528, + "IoU": 0.8604878048780488, + "TN": 488310, + "TP": 7056, + "n_pred": 7584, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9745692140157581, + "FN": 165, + "FP": 232, + "IoU": 0.9503998000999501, + "TN": 488506, + "TP": 7607, + "n_pred": 7839, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8714584443806634, + "FN": 2635, + "FP": 500, + "IoU": 0.7721988083127452, + "TN": 482748, + "TP": 10627, + "n_pred": 11127, + "n_ref": 13262 + }, + "2": { + "Dice": 0.9226357535082367, + "FN": 915, + "FP": 353, + "IoU": 0.8563823762600521, + "TN": 487681, + "TP": 7561, + "n_pred": 7914, + "n_ref": 8476 + }, + "3": { + "Dice": 0.9414440022740194, + "FN": 88, + "FP": 324, + "IoU": 0.8893662728249194, + "TN": 492786, + "TP": 3312, + "n_pred": 3636, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_008/summary_cross_val.json b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_008/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..d7b931ffa194f8c5ee56b643d250a1fac3babcc7 --- /dev/null +++ b/nnActive_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/loop_008/summary_cross_val.json @@ -0,0 +1,5532 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.9022319838890018, + "FN": 296.62222222222226, + "FP": 283.93333333333334, + "IoU": 0.8304904762525062, + "TN": 16478.733333333334, + "TP": 2780.711111111111, + "n_pred": 3064.6444444444446, + "n_ref": 3077.3333333333335 + }, + "mean": { + "1": { + "Dice": 0.8809638288494431, + "FN": 524.6, + "FP": 359.8, + "IoU": 0.8018597624406202, + "TN": 15876.966666666667, + "TP": 3078.633333333333, + "n_pred": 3438.4333333333334, + "n_ref": 3603.233333333333 + }, + "2": { + "Dice": 0.8788395523760787, + "FN": 249.33333333333334, + "FP": 347.1333333333333, + "IoU": 0.7880155785610121, + "TN": 17022.266666666666, + "TP": 2221.266666666667, + "n_pred": 2568.4, + "n_ref": 2470.6 + }, + "3": { + "Dice": 0.9468925704414834, + "FN": 115.93333333333334, + "FP": 144.86666666666667, + "IoU": 0.9015960877558861, + "TN": 16536.966666666667, + "TP": 3042.233333333333, + "n_pred": 3187.1, + "n_ref": 3158.1666666666665 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9751532752500807, + "FN": 31, + "FP": 46, + "IoU": 0.9515113350125944, + "TN": 11212, + "TP": 1511, + "n_pred": 1557, + "n_ref": 1542 + }, + "2": { + "Dice": 0.8197530864197531, + "FN": 100, + "FP": 192, + "IoU": 0.694560669456067, + "TN": 11844, + "TP": 664, + "n_pred": 856, + "n_ref": 764 + }, + "3": { + "Dice": 0.9586082783443312, + "FN": 46, + "FP": 92, + "IoU": 0.9205069124423964, + "TN": 11064, + "TP": 1598, + "n_pred": 1690, + "n_ref": 1644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7053412941746006, + "FN": 3611, + "FP": 41, + "IoU": 0.5448086750592048, + "TN": 11177, + "TP": 4371, + "n_pred": 4412, + "n_ref": 7982 + }, + "2": { + "Dice": 0.8436382217680123, + "FN": 233, + "FP": 379, + "IoU": 0.729562527618206, + "TN": 16937, + "TP": 1651, + "n_pred": 2030, + "n_ref": 1884 + }, + "3": { + "Dice": 0.9308755760368663, + "FN": 61, + "FP": 194, + "IoU": 0.8706896551724138, + "TN": 17228, + "TP": 1717, + "n_pred": 1911, + "n_ref": 1778 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9038914027149322, + "FN": 323, + "FP": 208, + "IoU": 0.8246367239101717, + "TN": 16172, + "TP": 2497, + "n_pred": 2705, + "n_ref": 2820 + }, + "2": { + "Dice": 0.879127925617185, + "FN": 163, + "FP": 214, + "IoU": 0.784324942791762, + "TN": 17452, + "TP": 1371, + "n_pred": 1585, + "n_ref": 1534 + }, + "3": { + "Dice": 0.9510694403750366, + "FN": 127, + "FP": 40, + "IoU": 0.9067039106145252, + "TN": 17410, + "TP": 1623, + "n_pred": 1663, + "n_ref": 1750 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient011_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9547738693467337, + "FN": 22, + "FP": 284, + "IoU": 0.9134615384615384, + "TN": 15664, + "TP": 3230, + "n_pred": 3514, + "n_ref": 3252 + }, + "2": { + "Dice": 0.8164313222079589, + "FN": 374, + "FP": 198, + "IoU": 0.6898047722342733, + "TN": 17356, + "TP": 1272, + "n_pred": 1470, + "n_ref": 1646 + }, + "3": { + "Dice": 0.9791570171375636, + "FN": 126, + "FP": 54, + "IoU": 0.9591651542649727, + "TN": 14792, + "TP": 4228, + "n_pred": 4282, + "n_ref": 4354 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.881480227900942, + "FN": 271, + "FP": 1830, + "IoU": 0.7880774662094009, + "TN": 54086, + "TP": 7813, + "n_pred": 9643, + "n_ref": 8084 + }, + "2": { + "Dice": 0.8886546008317227, + "FN": 924, + "FP": 977, + "IoU": 0.799620533361442, + "TN": 54513, + "TP": 7586, + "n_pred": 8563, + "n_ref": 8510 + }, + "3": { + "Dice": 0.9715835467831851, + "FN": 505, + "FP": 438, + "IoU": 0.9447374589779653, + "TN": 46936, + "TP": 16121, + "n_pred": 16559, + "n_ref": 16626 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7427738000530363, + "FN": 118, + "FP": 3762, + "IoU": 0.5908036279265978, + "TN": 16118, + "TP": 5602, + "n_pred": 9364, + "n_ref": 5720 + }, + "2": { + "Dice": 0.8875562218890555, + "FN": 568, + "FP": 257, + "IoU": 0.7978436657681941, + "TN": 21519, + "TP": 3256, + "n_pred": 3513, + "n_ref": 3824 + }, + "3": { + "Dice": 0.9648068669527897, + "FN": 84, + "FP": 244, + "IoU": 0.9320066334991708, + "TN": 20776, + "TP": 4496, + "n_pred": 4740, + "n_ref": 4580 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9500471253534402, + "FN": 347, + "FP": 130, + "IoU": 0.9048473967684022, + "TN": 7787, + "TP": 4536, + "n_pred": 4666, + "n_ref": 4883 + }, + "2": { + "Dice": 0.9002981119576019, + "FN": 180, + "FP": 121, + "IoU": 0.8186746987951807, + "TN": 11140, + "TP": 1359, + "n_pred": 1480, + "n_ref": 1539 + }, + "3": { + "Dice": 0.9779253760500097, + "FN": 73, + "FP": 40, + "IoU": 0.9568042813455657, + "TN": 10184, + "TP": 2503, + "n_pred": 2543, + "n_ref": 2576 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6297559695617948, + "FN": 1402, + "FP": 9, + "IoU": 0.4595940252776714, + "TN": 10189, + "TP": 1200, + "n_pred": 1209, + "n_ref": 2602 + }, + "2": { + "Dice": 0.9559912854030501, + "FN": 67, + "FP": 34, + "IoU": 0.9156928213689483, + "TN": 11602, + "TP": 1097, + "n_pred": 1131, + "n_ref": 1164 + }, + "3": { + "Dice": 0.9900358708648864, + "FN": 14, + "FP": 36, + "IoU": 0.9802683504340963, + "TN": 10266, + "TP": 2484, + "n_pred": 2520, + "n_ref": 2498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9104850808468078, + "FN": 191, + "FP": 346, + "IoU": 0.8356793145654835, + "TN": 35132, + "TP": 2731, + "n_pred": 3077, + "n_ref": 2922 + }, + "2": { + "Dice": 0.935420997920998, + "FN": 289, + "FP": 705, + "IoU": 0.8786769193213719, + "TN": 30207, + "TP": 7199, + "n_pred": 7904, + "n_ref": 7488 + }, + "3": { + "Dice": 0.9286343612334802, + "FN": 190, + "FP": 134, + "IoU": 0.8667763157894737, + "TN": 35968, + "TP": 2108, + "n_pred": 2242, + "n_ref": 2298 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 1.0, + "FN": 0, + "FP": 0, + "IoU": 1.0, + "TN": 19198, + "TP": 2, + "n_pred": 2, + "n_ref": 2 + }, + "2": { + "Dice": 0.9414047341870392, + "FN": 85, + "FP": 66, + "IoU": 0.8892961876832844, + "TN": 17836, + "TP": 1213, + "n_pred": 1279, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9873379559843232, + "FN": 31, + "FP": 53, + "IoU": 0.9749925573087228, + "TN": 15841, + "TP": 3275, + "n_pred": 3328, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8747002398081535, + "FN": 59, + "FP": 359, + "IoU": 0.7773042088438998, + "TN": 17323, + "TP": 1459, + "n_pred": 1818, + "n_ref": 1518 + }, + "2": { + "Dice": 0.9242009132420091, + "FN": 281, + "FP": 134, + "IoU": 0.8590831918505942, + "TN": 16255, + "TP": 2530, + "n_pred": 2664, + "n_ref": 2811 + }, + "3": { + "Dice": 0.8414814814814815, + "FN": 27, + "FP": 80, + "IoU": 0.7263427109974424, + "TN": 18809, + "TP": 284, + "n_pred": 364, + "n_ref": 311 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9798335918770272, + "FN": 74, + "FP": 69, + "IoU": 0.9604644733204313, + "TN": 9183, + "TP": 3474, + "n_pred": 3543, + "n_ref": 3548 + }, + "2": { + "Dice": 0.9307936507936508, + "FN": 61, + "FP": 48, + "IoU": 0.8705463182897862, + "TN": 11958, + "TP": 733, + "n_pred": 781, + "n_ref": 794 + }, + "3": { + "Dice": 0.9764232317423807, + "FN": 35, + "FP": 6, + "IoU": 0.9539325842696629, + "TN": 11910, + "TP": 849, + "n_pred": 855, + "n_ref": 884 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9486809292558078, + "FN": 209, + "FP": 182, + "IoU": 0.9023720349563046, + "TN": 15195, + "TP": 3614, + "n_pred": 3796, + "n_ref": 3823 + }, + "2": { + "Dice": 0.9354973821989528, + "FN": 280, + "FP": 336, + "IoU": 0.87881172535904, + "TN": 14117, + "TP": 4467, + "n_pred": 4803, + "n_ref": 4747 + }, + "3": { + "Dice": 0.9627918287937743, + "FN": 267, + "FP": 39, + "IoU": 0.9282532239155921, + "TN": 14935, + "TP": 3959, + "n_pred": 3998, + "n_ref": 4226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7537895511405445, + "FN": 1607, + "FP": 66, + "IoU": 0.6048653755314124, + "TN": 14966, + "TP": 2561, + "n_pred": 2627, + "n_ref": 4168 + }, + "2": { + "Dice": 0.8454640250260689, + "FN": 291, + "FP": 450, + "IoU": 0.7322976878612717, + "TN": 16432, + "TP": 2027, + "n_pred": 2477, + "n_ref": 2318 + }, + "3": { + "Dice": 0.9311281165144408, + "FN": 168, + "FP": 111, + "IoU": 0.8711316397228638, + "TN": 17035, + "TP": 1886, + "n_pred": 1997, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient043_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8332730124261069, + "FN": 2169, + "FP": 595, + "IoU": 0.7141970840657637, + "TN": 22329, + "TP": 6907, + "n_pred": 7502, + "n_ref": 9076 + }, + "2": { + "Dice": 0.8557651093013288, + "FN": 501, + "FP": 845, + "IoU": 0.7478928638321783, + "TN": 26661, + "TP": 3993, + "n_pred": 4838, + "n_ref": 4494 + }, + "3": { + "Dice": 0.9642497482376636, + "FN": 284, + "FP": 284, + "IoU": 0.9309674282936315, + "TN": 23772, + "TP": 7660, + "n_pred": 7944, + "n_ref": 7944 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9088672979953265, + "FN": 571, + "FP": 170, + "IoU": 0.8329576194770063, + "TN": 21164, + "TP": 3695, + "n_pred": 3865, + "n_ref": 4266 + }, + "2": { + "Dice": 0.8318200577796121, + "FN": 629, + "FP": 1001, + "IoU": 0.7120650061826532, + "TN": 19939, + "TP": 4031, + "n_pred": 5032, + "n_ref": 4660 + }, + "3": { + "Dice": 0.9619434784738209, + "FN": 250, + "FP": 527, + "IoU": 0.9266773615174105, + "TN": 15003, + "TP": 9820, + "n_pred": 10347, + "n_ref": 10070 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9602680708472954, + "FN": 112, + "FP": 386, + "IoU": 0.923572744014733, + "TN": 6284, + "TP": 6018, + "n_pred": 6404, + "n_ref": 6130 + }, + "2": { + "Dice": 0.8951421800947867, + "FN": 109, + "FP": 245, + "IoU": 0.8101876675603217, + "TN": 10935, + "TP": 1511, + "n_pred": 1756, + "n_ref": 1620 + }, + "3": { + "Dice": 0.9803149606299213, + "FN": 85, + "FP": 45, + "IoU": 0.9613899613899614, + "TN": 9433, + "TP": 3237, + "n_pred": 3282, + "n_ref": 3322 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9054602184087364, + "FN": 119, + "FP": 184, + "IoU": 0.8272519954389966, + "TN": 23846, + "TP": 1451, + "n_pred": 1635, + "n_ref": 1570 + }, + "2": { + "Dice": 0.7784530386740331, + "FN": 359, + "FP": 2047, + "IoU": 0.6372682044323835, + "TN": 18967, + "TP": 4227, + "n_pred": 6274, + "n_ref": 4586 + }, + "3": { + "Dice": 0.8812012925299373, + "FN": 240, + "FP": 1010, + "IoU": 0.7876316683656133, + "TN": 19714, + "TP": 4636, + "n_pred": 5646, + "n_ref": 4876 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient051_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient051_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9704641350210971, + "FN": 8, + "FP": 20, + "IoU": 0.9426229508196722, + "TN": 12312, + "TP": 460, + "n_pred": 480, + "n_ref": 468 + }, + "2": { + "Dice": 0.9403812824956672, + "FN": 191, + "FP": 153, + "IoU": 0.8874713771671573, + "TN": 9743, + "TP": 2713, + "n_pred": 2866, + "n_ref": 2904 + }, + "3": { + "Dice": 0.9531781323567878, + "FN": 44, + "FP": 135, + "IoU": 0.9105447276361819, + "TN": 10799, + "TP": 1822, + "n_pred": 1957, + "n_ref": 1866 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient062_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6103420195439739, + "FN": 1851, + "FP": 63, + "IoU": 0.43920304717257547, + "TN": 15787, + "TP": 1499, + "n_pred": 1562, + "n_ref": 3350 + }, + "2": { + "Dice": 0.8543128353281056, + "FN": 266, + "FP": 440, + "IoU": 0.7456772334293948, + "TN": 16424, + "TP": 2070, + "n_pred": 2510, + "n_ref": 2336 + }, + "3": { + "Dice": 0.9541254660398768, + "FN": 60, + "FP": 223, + "IoU": 0.912275263484191, + "TN": 15974, + "TP": 2943, + "n_pred": 3166, + "n_ref": 3003 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8321238509917755, + "FN": 256, + "FP": 91, + "IoU": 0.7125103562551781, + "TN": 11593, + "TP": 860, + "n_pred": 951, + "n_ref": 1116 + }, + "2": { + "Dice": 0.8013245033112583, + "FN": 321, + "FP": 99, + "IoU": 0.6685082872928176, + "TN": 11533, + "TP": 847, + "n_pred": 946, + "n_ref": 1168 + }, + "3": { + "Dice": 0.9425981873111783, + "FN": 30, + "FP": 103, + "IoU": 0.8914285714285715, + "TN": 11575, + "TP": 1092, + "n_pred": 1195, + "n_ref": 1122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9741413605622596, + "FN": 127, + "FP": 68, + "IoU": 0.9495863495346433, + "TN": 8932, + "TP": 3673, + "n_pred": 3741, + "n_ref": 3800 + }, + "2": { + "Dice": 0.889763779527559, + "FN": 15, + "FP": 69, + "IoU": 0.8014184397163121, + "TN": 12377, + "TP": 339, + "n_pred": 408, + "n_ref": 354 + }, + "3": { + "Dice": 0.9559434746467166, + "FN": 45, + "FP": 8, + "IoU": 0.9156050955414012, + "TN": 12172, + "TP": 575, + "n_pred": 583, + "n_ref": 620 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.94536525475752, + "FN": 48, + "FP": 41, + "IoU": 0.8963911525029103, + "TN": 5541, + "TP": 770, + "n_pred": 811, + "n_ref": 818 + }, + "2": { + "Dice": 0.8958990536277602, + "FN": 155, + "FP": 43, + "IoU": 0.8114285714285714, + "TN": 5350, + "TP": 852, + "n_pred": 895, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9584450402144772, + "FN": 7, + "FP": 117, + "IoU": 0.9202059202059202, + "TN": 4846, + "TP": 1430, + "n_pred": 1547, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7476563503274689, + "FN": 871, + "FP": 1094, + "IoU": 0.5970057424118129, + "TN": 20724, + "TP": 2911, + "n_pred": 4005, + "n_ref": 3782 + }, + "2": { + "Dice": 0.9260994015092375, + "FN": 149, + "FP": 419, + "IoU": 0.8623697601163073, + "TN": 21473, + "TP": 3559, + "n_pred": 3978, + "n_ref": 3708 + }, + "3": { + "Dice": 0.9407850964737192, + "FN": 118, + "FP": 60, + "IoU": 0.8881909547738693, + "TN": 24008, + "TP": 1414, + "n_pred": 1474, + "n_ref": 1532 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9671033133779859, + "FN": 480, + "FP": 75, + "IoU": 0.9363020773556754, + "TN": 16887, + "TP": 8158, + "n_pred": 8233, + "n_ref": 8638 + }, + "2": { + "Dice": 0.9387755102040817, + "FN": 46, + "FP": 134, + "IoU": 0.8846153846153846, + "TN": 24040, + "TP": 1380, + "n_pred": 1514, + "n_ref": 1426 + }, + "3": { + "Dice": 0.90625, + "FN": 8, + "FP": 28, + "IoU": 0.8285714285714286, + "TN": 25390, + "TP": 174, + "n_pred": 202, + "n_ref": 182 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8755389479735556, + "FN": 45, + "FP": 388, + "IoU": 0.7786298568507157, + "TN": 10844, + "TP": 1523, + "n_pred": 1911, + "n_ref": 1568 + }, + "2": { + "Dice": 0.8889934148635936, + "FN": 106, + "FP": 366, + "IoU": 0.8001693480101609, + "TN": 10438, + "TP": 1890, + "n_pred": 2256, + "n_ref": 1996 + }, + "3": { + "Dice": 0.9718331073956922, + "FN": 152, + "FP": 35, + "IoU": 0.9452094931145619, + "TN": 9387, + "TP": 3226, + "n_pred": 3261, + "n_ref": 3378 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9194622744338138, + "FN": 452, + "FP": 213, + "IoU": 0.8509302846895315, + "TN": 14739, + "TP": 3796, + "n_pred": 4009, + "n_ref": 4248 + }, + "2": { + "Dice": 0.7154861944777912, + "FN": 424, + "FP": 287, + "IoU": 0.5570093457943925, + "TN": 17595, + "TP": 894, + "n_pred": 1181, + "n_ref": 1318 + }, + "3": { + "Dice": 0.9443137254901961, + "FN": 212, + "FP": 72, + "IoU": 0.8945022288261516, + "TN": 16508, + "TP": 2408, + "n_pred": 2480, + "n_ref": 2620 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9919131494405672, + "FN": 44, + "FP": 29, + "IoU": 0.983956043956044, + "TN": 14650, + "TP": 4477, + "n_pred": 4506, + "n_ref": 4521 + }, + "2": { + "Dice": 0.8950341956586381, + "FN": 247, + "FP": 106, + "IoU": 0.810010764262648, + "TN": 17342, + "TP": 1505, + "n_pred": 1611, + "n_ref": 1752 + }, + "3": { + "Dice": 0.9700395703787451, + "FN": 181, + "FP": 31, + "IoU": 0.9418221734357849, + "TN": 15556, + "TP": 3432, + "n_pred": 3463, + "n_ref": 3613 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8952654232424677, + "FN": 320, + "FP": 45, + "IoU": 0.8103896103896104, + "TN": 4475, + "TP": 1560, + "n_pred": 1605, + "n_ref": 1880 + }, + "2": { + "Dice": 0.8748639825897715, + "FN": 66, + "FP": 49, + "IoU": 0.7775628626692457, + "TN": 5883, + "TP": 402, + "n_pred": 451, + "n_ref": 468 + }, + "3": { + "Dice": 0.8228043143297381, + "FN": 8, + "FP": 107, + "IoU": 0.6989528795811518, + "TN": 6018, + "TP": 267, + "n_pred": 374, + "n_ref": 275 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.886288883070157, + "FN": 275.8390804597701, + "FP": 274.4597701149425, + "IoU": 0.8069776371241976, + "TN": 16254.045977011492, + "TP": 2395.655172413793, + "n_pred": 2670.1149425287354, + "n_ref": 2671.4942528735633 + }, + "mean": { + "1": { + "Dice": 0.8465038740107647, + "FN": 485.2758620689655, + "FP": 231.86206896551724, + "IoU": 0.7518636522670646, + "TN": 16110.931034482759, + "TP": 2371.9310344827586, + "n_pred": 2603.793103448276, + "n_ref": 2857.206896551724 + }, + "2": { + "Dice": 0.8857784703591101, + "FN": 234.6551724137931, + "FP": 359.13793103448273, + "IoU": 0.7979905855932853, + "TN": 16337.965517241379, + "TP": 2268.2413793103447, + "n_pred": 2627.3793103448274, + "n_ref": 2502.896551724138 + }, + "3": { + "Dice": 0.9265843048405961, + "FN": 107.58620689655173, + "FP": 232.3793103448276, + "IoU": 0.8710786735122427, + "TN": 16313.241379310344, + "TP": 2546.793103448276, + "n_pred": 2779.1724137931033, + "n_ref": 2654.3793103448274 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9257324551442199, + "FN": 258, + "FP": 69, + "IoU": 0.8617336152219873, + "TN": 10435, + "TP": 2038, + "n_pred": 2107, + "n_ref": 2296 + }, + "2": { + "Dice": 0.8589795098433106, + "FN": 278, + "FP": 424, + "IoU": 0.7528169014084507, + "TN": 9960, + "TP": 2138, + "n_pred": 2562, + "n_ref": 2416 + }, + "3": { + "Dice": 0.9693693693693693, + "FN": 123, + "FP": 64, + "IoU": 0.9405594405594405, + "TN": 9654, + "TP": 2959, + "n_pred": 3023, + "n_ref": 3082 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5270599707459775, + "FN": 1077, + "FP": 863, + "IoU": 0.3578285335981463, + "TN": 22579, + "TP": 1081, + "n_pred": 1944, + "n_ref": 2158 + }, + "2": { + "Dice": 0.8987059348505132, + "FN": 438, + "FP": 470, + "IoU": 0.8160453808752026, + "TN": 20664, + "TP": 4028, + "n_pred": 4498, + "n_ref": 4466 + }, + "3": { + "Dice": 0.9660470409711684, + "FN": 249, + "FP": 109, + "IoU": 0.9343239772518804, + "TN": 20149, + "TP": 5093, + "n_pred": 5202, + "n_ref": 5342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7247796278158668, + "FN": 838, + "FP": 5, + "IoU": 0.5683563748079877, + "TN": 30047, + "TP": 1110, + "n_pred": 1115, + "n_ref": 1948 + }, + "2": { + "Dice": 0.778343949044586, + "FN": 233, + "FP": 1507, + "IoU": 0.6371220020855057, + "TN": 27205, + "TP": 3055, + "n_pred": 4562, + "n_ref": 3288 + }, + "3": { + "Dice": 0.8498693253315265, + "FN": 88, + "FP": 1463, + "IoU": 0.7389328395892947, + "TN": 26059, + "TP": 4390, + "n_pred": 5853, + "n_ref": 4478 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8607377948436643, + "FN": 3829, + "FP": 233, + "IoU": 0.7555221185675595, + "TN": 40985, + "TP": 12553, + "n_pred": 12786, + "n_ref": 16382 + }, + "2": { + "Dice": 0.8907473580171824, + "FN": 422, + "FP": 1015, + "IoU": 0.8030157642220699, + "TN": 50305, + "TP": 5858, + "n_pred": 6873, + "n_ref": 6280 + }, + "3": { + "Dice": 0.9783710606680729, + "FN": 520, + "FP": 167, + "IoU": 0.9576579352850539, + "TN": 41375, + "TP": 15538, + "n_pred": 15705, + "n_ref": 16058 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9604671197472959, + "FN": 147, + "FP": 266, + "IoU": 0.9239410681399631, + "TN": 7370, + "TP": 5017, + "n_pred": 5283, + "n_ref": 5164 + }, + "2": { + "Dice": 0.8515007898894155, + "FN": 114, + "FP": 262, + "IoU": 0.7414030261348006, + "TN": 11346, + "TP": 1078, + "n_pred": 1340, + "n_ref": 1192 + }, + "3": { + "Dice": 0.9641393442622951, + "FN": 48, + "FP": 92, + "IoU": 0.9307616221562809, + "TN": 10778, + "TP": 1882, + "n_pred": 1974, + "n_ref": 1930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient018_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient018_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9393203883495146, + "FN": 100, + "FP": 0, + "IoU": 0.88558352402746, + "TN": 5526, + "TP": 774, + "n_pred": 774, + "n_ref": 874 + }, + "2": { + "Dice": 0.939627159226954, + "FN": 247, + "FP": 106, + "IoU": 0.8861290322580645, + "TN": 3300, + "TP": 2747, + "n_pred": 2853, + "n_ref": 2994 + }, + "3": { + "Dice": 0.9407407407407408, + "FN": 14, + "FP": 82, + "IoU": 0.8881118881118881, + "TN": 5542, + "TP": 762, + "n_pred": 844, + "n_ref": 776 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5726347694306126, + "FN": 3851, + "FP": 97, + "IoU": 0.4011830729561656, + "TN": 25407, + "TP": 2645, + "n_pred": 2742, + "n_ref": 6496 + }, + "2": { + "Dice": 0.9195025283586169, + "FN": 380, + "FP": 209, + "IoU": 0.850999241082722, + "TN": 28047, + "TP": 3364, + "n_pred": 3573, + "n_ref": 3744 + }, + "3": { + "Dice": 0.9633737049467387, + "FN": 113, + "FP": 138, + "IoU": 0.9293355855855856, + "TN": 28448, + "TP": 3301, + "n_pred": 3439, + "n_ref": 3414 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7629219912263971, + "FN": 78, + "FP": 1165, + "IoU": 0.6167129201356768, + "TN": 28757, + "TP": 2000, + "n_pred": 3165, + "n_ref": 2078 + }, + "2": { + "Dice": 0.8655902247436177, + "FN": 696, + "FP": 1768, + "IoU": 0.7630313521831121, + "TN": 21602, + "TP": 7934, + "n_pred": 9702, + "n_ref": 8630 + }, + "3": { + "Dice": 0.8127259580621836, + "FN": 168, + "FP": 1127, + "IoU": 0.6845310596833131, + "TN": 27895, + "TP": 2810, + "n_pred": 3937, + "n_ref": 2978 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8861538461538462, + "FN": 0, + "FP": 37, + "IoU": 0.7955801104972375, + "TN": 19019, + "TP": 144, + "n_pred": 181, + "n_ref": 144 + }, + "2": { + "Dice": 0.9437323123023139, + "FN": 531, + "FP": 145, + "IoU": 0.8934594168636721, + "TN": 12855, + "TP": 5669, + "n_pred": 5814, + "n_ref": 6200 + }, + "3": { + "Dice": 0.9280898876404494, + "FN": 113, + "FP": 79, + "IoU": 0.8658280922431866, + "TN": 17769, + "TP": 1239, + "n_pred": 1318, + "n_ref": 1352 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.92176921919663, + "FN": 205, + "FP": 835, + "IoU": 0.8548904702106879, + "TN": 5633, + "TP": 6127, + "n_pred": 6962, + "n_ref": 6332 + }, + "2": { + "Dice": 0.915685650652243, + "FN": 205, + "FP": 60, + "IoU": 0.8444835680751174, + "TN": 11096, + "TP": 1439, + "n_pred": 1499, + "n_ref": 1644 + }, + "3": { + "Dice": 0.9210174029451138, + "FN": 4, + "FP": 55, + "IoU": 0.8535980148883374, + "TN": 12397, + "TP": 344, + "n_pred": 399, + "n_ref": 348 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient028_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6762513312034079, + "FN": 71, + "FP": 537, + "IoU": 0.5108608205953339, + "TN": 17957, + "TP": 635, + "n_pred": 1172, + "n_ref": 706 + }, + "2": { + "Dice": 0.7490081076418837, + "FN": 457, + "FP": 998, + "IoU": 0.5987313844456702, + "TN": 15574, + "TP": 2171, + "n_pred": 3169, + "n_ref": 2628 + }, + "3": { + "Dice": 0.8433355437665783, + "FN": 55, + "FP": 1835, + "IoU": 0.7291099326358034, + "TN": 12223, + "TP": 5087, + "n_pred": 6922, + "n_ref": 5142 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient049_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6618705035971223, + "FN": 56, + "FP": 179, + "IoU": 0.4946236559139785, + "TN": 44335, + "TP": 230, + "n_pred": 409, + "n_ref": 286 + }, + "2": { + "Dice": 0.8993674525589419, + "FN": 196, + "FP": 154, + "IoU": 0.8171368861024033, + "TN": 42886, + "TP": 1564, + "n_pred": 1718, + "n_ref": 1760 + }, + "3": { + "Dice": 0.9752676264304171, + "FN": 151, + "FP": 50, + "IoU": 0.9517291066282421, + "TN": 40636, + "TP": 3963, + "n_pred": 4013, + "n_ref": 4114 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8747813920951382, + "FN": 155, + "FP": 561, + "IoU": 0.7774323904258627, + "TN": 15983, + "TP": 2501, + "n_pred": 3062, + "n_ref": 2656 + }, + "2": { + "Dice": 0.9082402367993889, + "FN": 336, + "FP": 625, + "IoU": 0.8319048451985307, + "TN": 13483, + "TP": 4756, + "n_pred": 5381, + "n_ref": 5092 + }, + "3": { + "Dice": 0.9640552995391705, + "FN": 370, + "FP": 98, + "IoU": 0.9306049822064056, + "TN": 12456, + "TP": 6276, + "n_pred": 6374, + "n_ref": 6646 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient053_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7927272727272727, + "FN": 37, + "FP": 20, + "IoU": 0.6566265060240963, + "TN": 12634, + "TP": 109, + "n_pred": 129, + "n_ref": 146 + }, + "2": { + "Dice": 0.8430324001258257, + "FN": 132, + "FP": 367, + "IoU": 0.7286568787384448, + "TN": 10961, + "TP": 1340, + "n_pred": 1707, + "n_ref": 1472 + }, + "3": { + "Dice": 0.9720605355064028, + "FN": 48, + "FP": 96, + "IoU": 0.9456398640996603, + "TN": 10151, + "TP": 2505, + "n_pred": 2601, + "n_ref": 2553 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient056_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8121306376360808, + "FN": 1137, + "FP": 71, + "IoU": 0.6836868290128306, + "TN": 8981, + "TP": 2611, + "n_pred": 2682, + "n_ref": 3748 + }, + "2": { + "Dice": 0.9410905550146057, + "FN": 137, + "FP": 105, + "IoU": 0.888735632183908, + "TN": 10625, + "TP": 1933, + "n_pred": 2038, + "n_ref": 2070 + }, + "3": { + "Dice": 0.9657766077472734, + "FN": 24, + "FP": 67, + "IoU": 0.9338181818181818, + "TN": 11425, + "TP": 1284, + "n_pred": 1351, + "n_ref": 1308 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8737254901960785, + "FN": 48, + "FP": 274, + "IoU": 0.775766016713092, + "TN": 17764, + "TP": 1114, + "n_pred": 1388, + "n_ref": 1162 + }, + "2": { + "Dice": 0.8744109330819981, + "FN": 545, + "FP": 521, + "IoU": 0.7768473937617751, + "TN": 14423, + "TP": 3711, + "n_pred": 4232, + "n_ref": 4256 + }, + "3": { + "Dice": 0.9557902273134061, + "FN": 382, + "FP": 112, + "IoU": 0.9153239629756599, + "TN": 13366, + "TP": 5340, + "n_pred": 5452, + "n_ref": 5722 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9704157435162257, + "FN": 145, + "FP": 82, + "IoU": 0.9425316455696202, + "TN": 8850, + "TP": 3723, + "n_pred": 3805, + "n_ref": 3868 + }, + "2": { + "Dice": 0.9022556390977443, + "FN": 14, + "FP": 116, + "IoU": 0.821917808219178, + "TN": 12070, + "TP": 600, + "n_pred": 716, + "n_ref": 614 + }, + "3": { + "Dice": 0.9849669272399278, + "FN": 21, + "FP": 4, + "IoU": 0.9703791469194313, + "TN": 11956, + "TP": 819, + "n_pred": 823, + "n_ref": 840 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9740649029062948, + "FN": 121, + "FP": 78, + "IoU": 0.9494410569105691, + "TN": 8864, + "TP": 3737, + "n_pred": 3815, + "n_ref": 3858 + }, + "2": { + "Dice": 0.9458762886597938, + "FN": 24, + "FP": 60, + "IoU": 0.8973105134474327, + "TN": 11982, + "TP": 734, + "n_pred": 794, + "n_ref": 758 + }, + "3": { + "Dice": 0.9799147900182593, + "FN": 25, + "FP": 8, + "IoU": 0.9606205250596659, + "TN": 11962, + "TP": 805, + "n_pred": 813, + "n_ref": 830 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9815155637352965, + "FN": 169, + "FP": 62, + "IoU": 0.9637020741671904, + "TN": 19236, + "TP": 6133, + "n_pred": 6195, + "n_ref": 6302 + }, + "2": { + "Dice": 0.8776758409785933, + "FN": 194, + "FP": 206, + "IoU": 0.782016348773842, + "TN": 23765, + "TP": 1435, + "n_pred": 1641, + "n_ref": 1629 + }, + "3": { + "Dice": 0.9602216505046507, + "FN": 44, + "FP": 157, + "IoU": 0.923486867148839, + "TN": 22973, + "TP": 2426, + "n_pred": 2583, + "n_ref": 2470 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9616564417177914, + "FN": 116, + "FP": 34, + "IoU": 0.9261447562776958, + "TN": 10769, + "TP": 1881, + "n_pred": 1915, + "n_ref": 1997 + }, + "2": { + "Dice": 0.9025171624713959, + "FN": 46, + "FP": 167, + "IoU": 0.8223519599666389, + "TN": 11601, + "TP": 986, + "n_pred": 1153, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9185667752442996, + "FN": 101, + "FP": 24, + "IoU": 0.8493975903614458, + "TN": 11970, + "TP": 705, + "n_pred": 729, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9267796610169492, + "FN": 38, + "FP": 178, + "IoU": 0.8635502210991788, + "TN": 11217, + "TP": 1367, + "n_pred": 1545, + "n_ref": 1405 + }, + "2": { + "Dice": 0.9048453006421483, + "FN": 87, + "FP": 76, + "IoU": 0.826226012793177, + "TN": 11862, + "TP": 775, + "n_pred": 851, + "n_ref": 862 + }, + "3": { + "Dice": 0.9499731038192577, + "FN": 41, + "FP": 52, + "IoU": 0.9047131147540983, + "TN": 11824, + "TP": 883, + "n_pred": 935, + "n_ref": 924 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient068_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient068_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8970850684116597, + "FN": 124, + "FP": 222, + "IoU": 0.8133764832793959, + "TN": 10946, + "TP": 1508, + "n_pred": 1730, + "n_ref": 1632 + }, + "2": { + "Dice": 0.8192219679633868, + "FN": 23, + "FP": 214, + "IoU": 0.6937984496124031, + "TN": 12026, + "TP": 537, + "n_pred": 751, + "n_ref": 560 + }, + "3": { + "Dice": 0.6051502145922747, + "FN": 3, + "FP": 549, + "IoU": 0.4338461538461538, + "TN": 11825, + "TP": 423, + "n_pred": 972, + "n_ref": 426 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8635437881873728, + "FN": 128, + "FP": 140, + "IoU": 0.7598566308243727, + "TN": 18084, + "TP": 848, + "n_pred": 988, + "n_ref": 976 + }, + "2": { + "Dice": 0.8942598187311178, + "FN": 568, + "FP": 272, + "IoU": 0.8087431693989071, + "TN": 14808, + "TP": 3552, + "n_pred": 3824, + "n_ref": 4120 + }, + "3": { + "Dice": 0.9448209099709584, + "FN": 186, + "FP": 42, + "IoU": 0.8954128440366973, + "TN": 17020, + "TP": 1952, + "n_pred": 1994, + "n_ref": 2138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7495451788963008, + "FN": 803, + "FP": 23, + "IoU": 0.5994180407371484, + "TN": 10738, + "TP": 1236, + "n_pred": 1259, + "n_ref": 2039 + }, + "2": { + "Dice": 0.8815958815958816, + "FN": 107, + "FP": 77, + "IoU": 0.7882623705408516, + "TN": 11931, + "TP": 685, + "n_pred": 762, + "n_ref": 792 + }, + "3": { + "Dice": 0.9224293445580276, + "FN": 112, + "FP": 17, + "IoU": 0.8560267857142857, + "TN": 11904, + "TP": 767, + "n_pred": 784, + "n_ref": 879 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient082_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9726940442915502, + "FN": 58, + "FP": 69, + "IoU": 0.9468396818752616, + "TN": 4011, + "TP": 2262, + "n_pred": 2331, + "n_ref": 2320 + }, + "2": { + "Dice": 0.9235382308845578, + "FN": 20, + "FP": 31, + "IoU": 0.8579387186629527, + "TN": 6041, + "TP": 308, + "n_pred": 339, + "n_ref": 328 + }, + "3": { + "Dice": 0.9230769230769231, + "FN": 5, + "FP": 6, + "IoU": 0.8571428571428571, + "TN": 6323, + "TP": 66, + "n_pred": 72, + "n_ref": 71 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient095_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9245195647140542, + "FN": 415, + "FP": 237, + "IoU": 0.8596340150699677, + "TN": 8155, + "TP": 3993, + "n_pred": 4230, + "n_ref": 4408 + }, + "2": { + "Dice": 0.8660230751118436, + "FN": 292, + "FP": 277, + "IoU": 0.7637043189368771, + "TN": 10392, + "TP": 1839, + "n_pred": 2116, + "n_ref": 2131 + }, + "3": { + "Dice": 0.9026808666911494, + "FN": 95, + "FP": 170, + "IoU": 0.822623828647925, + "TN": 11306, + "TP": 1229, + "n_pred": 1399, + "n_ref": 1324 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient095_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient095_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8607208307880269, + "FN": 69, + "FP": 387, + "IoU": 0.7554959785522788, + "TN": 23735, + "TP": 1409, + "n_pred": 1796, + "n_ref": 1478 + }, + "2": { + "Dice": 0.9206443914081146, + "FN": 83, + "FP": 183, + "IoU": 0.8529574350469873, + "TN": 23791, + "TP": 1543, + "n_pred": 1726, + "n_ref": 1626 + }, + "3": { + "Dice": 0.9559450497394599, + "FN": 17, + "FP": 76, + "IoU": 0.9156079854809437, + "TN": 24498, + "TP": 1009, + "n_pred": 1085, + "n_ref": 1026 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.8808033651139343, + "FN": 276.58620689655174, + "FP": 316.7241379310345, + "IoU": 0.7974766916654428, + "TN": 17141.862068965518, + "TP": 2347.5862068965516, + "n_pred": 2664.310344827586, + "n_ref": 2624.1724137931033 + }, + "mean": { + "1": { + "Dice": 0.8227703281358224, + "FN": 430.2758620689655, + "FP": 489.51724137931035, + "IoU": 0.7123731601118962, + "TN": 16892.724137931036, + "TP": 2270.2413793103447, + "n_pred": 2759.7586206896553, + "n_ref": 2700.5172413793102 + }, + "2": { + "Dice": 0.8946451295001994, + "FN": 286.2758620689655, + "FP": 280.1034482758621, + "IoU": 0.8123361377031354, + "TN": 16983.896551724138, + "TP": 2532.4827586206898, + "n_pred": 2812.5862068965516, + "n_ref": 2818.7586206896553 + }, + "3": { + "Dice": 0.9249946377057807, + "FN": 113.20689655172414, + "FP": 180.55172413793105, + "IoU": 0.8677207771812969, + "TN": 17548.96551724138, + "TP": 2240.0344827586205, + "n_pred": 2420.5862068965516, + "n_ref": 2353.2413793103447 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6275331935709294, + "FN": 1058, + "FP": 8, + "IoU": 0.45723014256619143, + "TN": 17236, + "TP": 898, + "n_pred": 906, + "n_ref": 1956 + }, + "2": { + "Dice": 0.9286533608625832, + "FN": 176, + "FP": 135, + "IoU": 0.8668094218415417, + "TN": 16865, + "TP": 2024, + "n_pred": 2159, + "n_ref": 2200 + }, + "3": { + "Dice": 0.9827909887359199, + "FN": 63, + "FP": 47, + "IoU": 0.9661642571516457, + "TN": 15949, + "TP": 3141, + "n_pred": 3188, + "n_ref": 3204 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8560767590618337, + "FN": 245, + "FP": 1645, + "IoU": 0.7483690587138863, + "TN": 11689, + "TP": 5621, + "n_pred": 7266, + "n_ref": 5866 + }, + "2": { + "Dice": 0.8768703803857941, + "FN": 386, + "FP": 297, + "IoU": 0.7807383627608346, + "TN": 16085, + "TP": 2432, + "n_pred": 2729, + "n_ref": 2818 + }, + "3": { + "Dice": 0.9540246555474982, + "FN": 209, + "FP": 108, + "IoU": 0.9120909595119245, + "TN": 15594, + "TP": 3289, + "n_pred": 3397, + "n_ref": 3498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient010_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient010_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8903144829509797, + "FN": 1484, + "FP": 89, + "IoU": 0.802312429307528, + "TN": 17643, + "TP": 6384, + "n_pred": 6473, + "n_ref": 7868 + }, + "2": { + "Dice": 0.9072164948453608, + "FN": 234, + "FP": 261, + "IoU": 0.8301886792452831, + "TN": 22685, + "TP": 2420, + "n_pred": 2681, + "n_ref": 2654 + }, + "3": { + "Dice": 0.9729790084859312, + "FN": 107, + "FP": 135, + "IoU": 0.9473798651880844, + "TN": 21001, + "TP": 4357, + "n_pred": 4492, + "n_ref": 4464 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient017_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8497913769123783, + "FN": 609, + "FP": 39, + "IoU": 0.7388149939540508, + "TN": 16719, + "TP": 1833, + "n_pred": 1872, + "n_ref": 2442 + }, + "2": { + "Dice": 0.8846557672116394, + "FN": 643, + "FP": 126, + "IoU": 0.793168370091447, + "TN": 15482, + "TP": 2949, + "n_pred": 3075, + "n_ref": 3592 + }, + "3": { + "Dice": 0.9673413063477461, + "FN": 25, + "FP": 117, + "IoU": 0.9367483296213809, + "TN": 16955, + "TP": 2103, + "n_pred": 2220, + "n_ref": 2128 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9708360337005832, + "FN": 68, + "FP": 22, + "IoU": 0.9433249370277078, + "TN": 4812, + "TP": 1498, + "n_pred": 1520, + "n_ref": 1566 + }, + "2": { + "Dice": 0.9278230500582072, + "FN": 7, + "FP": 117, + "IoU": 0.8653637350705755, + "TN": 5479, + "TP": 797, + "n_pred": 914, + "n_ref": 804 + }, + "3": { + "Dice": 0.9593984962406015, + "FN": 54, + "FP": 0, + "IoU": 0.9219653179190751, + "TN": 5708, + "TP": 638, + "n_pred": 638, + "n_ref": 692 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient023_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient023_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.934412265758092, + "FN": 100, + "FP": 208, + "IoU": 0.876898481215028, + "TN": 10298, + "TP": 2194, + "n_pred": 2402, + "n_ref": 2294 + }, + "2": { + "Dice": 0.9527272727272728, + "FN": 137, + "FP": 32, + "IoU": 0.9097222222222222, + "TN": 10928, + "TP": 1703, + "n_pred": 1735, + "n_ref": 1840 + }, + "3": { + "Dice": 0.9543918918918919, + "FN": 13, + "FP": 41, + "IoU": 0.9127625201938611, + "TN": 12181, + "TP": 565, + "n_pred": 606, + "n_ref": 578 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7512204107948789, + "FN": 2520, + "FP": 181, + "IoU": 0.6015636524561144, + "TN": 31621, + "TP": 4078, + "n_pred": 4259, + "n_ref": 6598 + }, + "2": { + "Dice": 0.9184177374653565, + "FN": 909, + "FP": 710, + "IoU": 0.849142750652255, + "TN": 27668, + "TP": 9113, + "n_pred": 9823, + "n_ref": 10022 + }, + "3": { + "Dice": 0.9401339376310627, + "FN": 665, + "FP": 220, + "IoU": 0.887030890988001, + "TN": 30566, + "TP": 6949, + "n_pred": 7169, + "n_ref": 7614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8571428571428571, + "FN": 28, + "FP": 2, + "IoU": 0.75, + "TN": 12680, + "TP": 90, + "n_pred": 92, + "n_ref": 118 + }, + "2": { + "Dice": 0.8771084337349397, + "FN": 424, + "FP": 188, + "IoU": 0.7811158798283262, + "TN": 10004, + "TP": 2184, + "n_pred": 2372, + "n_ref": 2608 + }, + "3": { + "Dice": 0.9375778054419349, + "FN": 40, + "FP": 311, + "IoU": 0.8824907934382323, + "TN": 9813, + "TP": 2636, + "n_pred": 2947, + "n_ref": 2676 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8885832187070152, + "FN": 324, + "FP": 0, + "IoU": 0.7995049504950495, + "TN": 4784, + "TP": 1292, + "n_pred": 1292, + "n_ref": 1616 + }, + "2": { + "Dice": 0.8374083129584352, + "FN": 41, + "FP": 225, + "IoU": 0.7202944269190326, + "TN": 5449, + "TP": 685, + "n_pred": 910, + "n_ref": 726 + }, + "3": { + "Dice": 0.8529801324503311, + "FN": 48, + "FP": 507, + "IoU": 0.74364896073903, + "TN": 4235, + "TP": 1610, + "n_pred": 2117, + "n_ref": 1658 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient029_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6139872842870118, + "FN": 12, + "FP": 413, + "IoU": 0.4429882044560944, + "TN": 24837, + "TP": 338, + "n_pred": 751, + "n_ref": 350 + }, + "2": { + "Dice": 0.9282446738988368, + "FN": 403, + "FP": 146, + "IoU": 0.8660975609756097, + "TN": 21500, + "TP": 3551, + "n_pred": 3697, + "n_ref": 3954 + }, + "3": { + "Dice": 0.7193828351012537, + "FN": 39, + "FP": 252, + "IoU": 0.5617469879518072, + "TN": 24936, + "TP": 373, + "n_pred": 625, + "n_ref": 412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6876446089773253, + "FN": 106, + "FP": 1244, + "IoU": 0.5239774330042313, + "TN": 22764, + "TP": 1486, + "n_pred": 2730, + "n_ref": 1592 + }, + "2": { + "Dice": 0.8653344917463076, + "FN": 294, + "FP": 171, + "IoU": 0.7626339969372129, + "TN": 23641, + "TP": 1494, + "n_pred": 1665, + "n_ref": 1788 + }, + "3": { + "Dice": 0.861021331609567, + "FN": 102, + "FP": 113, + "IoU": 0.7559591373439274, + "TN": 24719, + "TP": 666, + "n_pred": 779, + "n_ref": 768 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8650776295648371, + "FN": 70, + "FP": 547, + "IoU": 0.7622350674373796, + "TN": 48605, + "TP": 1978, + "n_pred": 2525, + "n_ref": 2048 + }, + "2": { + "Dice": 0.9262456601294924, + "FN": 1065, + "FP": 507, + "IoU": 0.8626234379096391, + "TN": 39757, + "TP": 9871, + "n_pred": 10378, + "n_ref": 10936 + }, + "3": { + "Dice": 0.85108153078203, + "FN": 364, + "FP": 352, + "IoU": 0.7407675597393193, + "TN": 48438, + "TP": 2046, + "n_pred": 2398, + "n_ref": 2410 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8026624902114331, + "FN": 379, + "FP": 1133, + "IoU": 0.670372792674951, + "TN": 27413, + "TP": 3075, + "n_pred": 4208, + "n_ref": 3454 + }, + "2": { + "Dice": 0.8462425080682342, + "FN": 609, + "FP": 725, + "IoU": 0.7334665334665335, + "TN": 26995, + "TP": 3671, + "n_pred": 4396, + "n_ref": 4280 + }, + "3": { + "Dice": 0.9228574563809941, + "FN": 161, + "FP": 542, + "IoU": 0.8567644661776691, + "TN": 27092, + "TP": 4205, + "n_pred": 4747, + "n_ref": 4366 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7674737322978529, + "FN": 78, + "FP": 431, + "IoU": 0.6226834692364714, + "TN": 30651, + "TP": 840, + "n_pred": 1271, + "n_ref": 918 + }, + "2": { + "Dice": 0.9216663344628264, + "FN": 236, + "FP": 157, + "IoU": 0.8547134935304991, + "TN": 29295, + "TP": 2312, + "n_pred": 2469, + "n_ref": 2548 + }, + "3": { + "Dice": 0.9819867549668874, + "FN": 73, + "FP": 63, + "IoU": 0.9646109810044237, + "TN": 28157, + "TP": 3707, + "n_pred": 3770, + "n_ref": 3780 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient049_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient049_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9292276284450494, + "FN": 351, + "FP": 65, + "IoU": 0.8678106132824913, + "TN": 48053, + "TP": 2731, + "n_pred": 2796, + "n_ref": 3082 + }, + "2": { + "Dice": 0.8552850446091033, + "FN": 430, + "FP": 527, + "IoU": 0.7471598414795244, + "TN": 47415, + "TP": 2828, + "n_pred": 3355, + "n_ref": 3258 + }, + "3": { + "Dice": 0.9671114132744115, + "FN": 96, + "FP": 291, + "IoU": 0.9363172618068125, + "TN": 45123, + "TP": 5690, + "n_pred": 5981, + "n_ref": 5786 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient050_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient050_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6825247291568535, + "FN": 456, + "FP": 892, + "IoU": 0.518055058991777, + "TN": 29203, + "TP": 1449, + "n_pred": 2341, + "n_ref": 1905 + }, + "2": { + "Dice": 0.827435336507528, + "FN": 264, + "FP": 1077, + "IoU": 0.7056628621597892, + "TN": 27444, + "TP": 3215, + "n_pred": 4292, + "n_ref": 3479 + }, + "3": { + "Dice": 0.9438307433064969, + "FN": 249, + "FP": 351, + "IoU": 0.8936358801630917, + "TN": 26359, + "TP": 5041, + "n_pred": 5392, + "n_ref": 5290 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7662790697674419, + "FN": 106, + "FP": 698, + "IoU": 0.6211121583411876, + "TN": 10678, + "TP": 1318, + "n_pred": 2016, + "n_ref": 1424 + }, + "2": { + "Dice": 0.9408528198074277, + "FN": 42, + "FP": 87, + "IoU": 0.8883116883116883, + "TN": 11645, + "TP": 1026, + "n_pred": 1113, + "n_ref": 1068 + }, + "3": { + "Dice": 0.9837758112094396, + "FN": 16, + "FP": 28, + "IoU": 0.9680696661828737, + "TN": 11422, + "TP": 1334, + "n_pred": 1362, + "n_ref": 1350 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9663981135783062, + "FN": 153, + "FP": 18, + "IoU": 0.9349809885931559, + "TN": 3770, + "TP": 2459, + "n_pred": 2477, + "n_ref": 2612 + }, + "2": { + "Dice": 0.9522944116310768, + "FN": 16, + "FP": 89, + "IoU": 0.9089332176929749, + "TN": 5247, + "TP": 1048, + "n_pred": 1137, + "n_ref": 1064 + }, + "3": { + "Dice": 0.9871299871299871, + "FN": 32, + "FP": 8, + "IoU": 0.974587039390089, + "TN": 4826, + "TP": 1534, + "n_pred": 1542, + "n_ref": 1566 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient058_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient058_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7092903668152211, + "FN": 111, + "FP": 1585, + "IoU": 0.549535192563081, + "TN": 9035, + "TP": 2069, + "n_pred": 3654, + "n_ref": 2180 + }, + "2": { + "Dice": 0.8891104906262465, + "FN": 63, + "FP": 493, + "IoU": 0.800359066427289, + "TN": 10015, + "TP": 2229, + "n_pred": 2722, + "n_ref": 2292 + }, + "3": { + "Dice": 0.8044485634847081, + "FN": 68, + "FP": 565, + "IoU": 0.6728682170542636, + "TN": 10865, + "TP": 1302, + "n_pred": 1867, + "n_ref": 1370 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8459869848156182, + "FN": 71, + "FP": 0, + "IoU": 0.7330827067669173, + "TN": 6134, + "TP": 195, + "n_pred": 195, + "n_ref": 266 + }, + "2": { + "Dice": 0.9031524211894703, + "FN": 413, + "FP": 183, + "IoU": 0.8234074074074074, + "TN": 3025, + "TP": 2779, + "n_pred": 2962, + "n_ref": 3192 + }, + "3": { + "Dice": 0.9537489227233553, + "FN": 66, + "FP": 95, + "IoU": 0.9115870400878638, + "TN": 4579, + "TP": 1660, + "n_pred": 1755, + "n_ref": 1726 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient064_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8114856429463171, + "FN": 85, + "FP": 66, + "IoU": 0.6827731092436975, + "TN": 5924, + "TP": 325, + "n_pred": 391, + "n_ref": 410 + }, + "3": { + "Dice": 0.8388746803069054, + "FN": 24, + "FP": 228, + "IoU": 0.7224669603524229, + "TN": 5492, + "TP": 656, + "n_pred": 884, + "n_ref": 680 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient066_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8198363666722325, + "FN": 5, + "FP": 1074, + "IoU": 0.6946802490096208, + "TN": 2866, + "TP": 2455, + "n_pred": 3529, + "n_ref": 2460 + }, + "2": { + "Dice": 0.9432485322896281, + "FN": 73, + "FP": 43, + "IoU": 0.8925925925925926, + "TN": 5320, + "TP": 964, + "n_pred": 1007, + "n_ref": 1037 + }, + "3": { + "Dice": 0.9733593242365172, + "FN": 38, + "FP": 3, + "IoU": 0.9481012658227848, + "TN": 5610, + "TP": 749, + "n_pred": 752, + "n_ref": 787 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient075_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8706245710363761, + "FN": 1446, + "FP": 62, + "IoU": 0.7708903068975995, + "TN": 6218, + "TP": 5074, + "n_pred": 5136, + "n_ref": 6520 + }, + "2": { + "Dice": 0.8489208633093526, + "FN": 191, + "FP": 208, + "IoU": 0.7375, + "TN": 11280, + "TP": 1121, + "n_pred": 1329, + "n_ref": 1312 + }, + "3": { + "Dice": 0.9330985915492958, + "FN": 100, + "FP": 52, + "IoU": 0.8745874587458746, + "TN": 11588, + "TP": 1060, + "n_pred": 1112, + "n_ref": 1160 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8872222222222222, + "FN": 59, + "FP": 347, + "IoU": 0.7973040439340988, + "TN": 23597, + "TP": 1597, + "n_pred": 1944, + "n_ref": 1656 + }, + "2": { + "Dice": 0.9167945962542217, + "FN": 562, + "FP": 522, + "IoU": 0.8463718820861678, + "TN": 18544, + "TP": 5972, + "n_pred": 6494, + "n_ref": 6534 + }, + "3": { + "Dice": 0.95489443378119, + "FN": 192, + "FP": 184, + "IoU": 0.9136822773186409, + "TN": 21244, + "TP": 3980, + "n_pred": 4164, + "n_ref": 4172 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient076_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient076_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8874059694248969, + "FN": 77, + "FP": 851, + "IoU": 0.7976008724100327, + "TN": 14615, + "TP": 3657, + "n_pred": 4508, + "n_ref": 3734 + }, + "2": { + "Dice": 0.8822695035460993, + "FN": 184, + "FP": 314, + "IoU": 0.7893401015228426, + "TN": 16836, + "TP": 1866, + "n_pred": 2180, + "n_ref": 2050 + }, + "3": { + "Dice": 0.9538922155688623, + "FN": 117, + "FP": 37, + "IoU": 0.9118488838008014, + "TN": 17453, + "TP": 1593, + "n_pred": 1630, + "n_ref": 1710 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient090_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9494765589440146, + "FN": 103, + "FP": 8, + "IoU": 0.9038128249566725, + "TN": 5246, + "TP": 1043, + "n_pred": 1051, + "n_ref": 1146 + }, + "2": { + "Dice": 0.7767810026385225, + "FN": 55, + "FP": 368, + "IoU": 0.635030198446937, + "TN": 5241, + "TP": 736, + "n_pred": 1104, + "n_ref": 791 + }, + "3": { + "Dice": 0.7569611550360948, + "FN": 208, + "FP": 499, + "IoU": 0.6089601769911505, + "TN": 4592, + "TP": 1101, + "n_pred": 1600, + "n_ref": 1309 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient091_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7180717386337674, + "FN": 45, + "FP": 2423, + "IoU": 0.560149705934771, + "TN": 19989, + "TP": 3143, + "n_pred": 5566, + "n_ref": 3188 + }, + "2": { + "Dice": 0.9057772917805723, + "FN": 234, + "FP": 283, + "IoU": 0.8277814790139907, + "TN": 22598, + "TP": 2485, + "n_pred": 2768, + "n_ref": 2719 + }, + "3": { + "Dice": 0.9537037037037037, + "FN": 90, + "FP": 50, + "IoU": 0.911504424778761, + "TN": 24018, + "TP": 1442, + "n_pred": 1492, + "n_ref": 1532 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9813389562467053, + "FN": 24, + "FP": 153, + "IoU": 0.9633616228524116, + "TN": 1569, + "TP": 4654, + "n_pred": 4807, + "n_ref": 4678 + }, + "2": { + "Dice": 0.9528158295281582, + "FN": 38, + "FP": 24, + "IoU": 0.9098837209302325, + "TN": 5712, + "TP": 626, + "n_pred": 650, + "n_ref": 664 + }, + "3": { + "Dice": 0.9825918762088974, + "FN": 8, + "FP": 10, + "IoU": 0.9657794676806084, + "TN": 5874, + "TP": 508, + "n_pred": 518, + "n_ref": 516 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient097_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6611295681063123, + "FN": 2390, + "FP": 58, + "IoU": 0.49379652605459057, + "TN": 20764, + "TP": 2388, + "n_pred": 2446, + "n_ref": 4778 + }, + "2": { + "Dice": 0.9398704902867715, + "FN": 88, + "FP": 42, + "IoU": 0.8865619546247818, + "TN": 24454, + "TP": 1016, + "n_pred": 1058, + "n_ref": 1104 + }, + "3": { + "Dice": 0.9794749403341289, + "FN": 16, + "FP": 27, + "IoU": 0.9597754911131899, + "TN": 24531, + "TP": 1026, + "n_pred": 1053, + "n_ref": 1042 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.9011147943870301, + "FN": 279.50574712643675, + "FP": 431.09195402298855, + "IoU": 0.8276231829484324, + "TN": 17787.862068965518, + "TP": 3349.816091954023, + "n_pred": 3780.9080459770116, + "n_ref": 3629.3218390804595 + }, + "mean": { + "1": { + "Dice": 0.8873682356251742, + "FN": 345.2758620689655, + "FP": 681.7241379310345, + "IoU": 0.8099995599007542, + "TN": 16344.965517241379, + "TP": 4476.310344827586, + "n_pred": 5158.0344827586205, + "n_ref": 4821.586206896552 + }, + "2": { + "Dice": 0.8875984156504714, + "FN": 297.51724137931035, + "FP": 397.7586206896552, + "IoU": 0.8011978291641607, + "TN": 18435.51724137931, + "TP": 2717.4827586206898, + "n_pred": 3115.2413793103447, + "n_ref": 3015.0 + }, + "3": { + "Dice": 0.9283777318854448, + "FN": 195.72413793103448, + "FP": 213.79310344827587, + "IoU": 0.871672159780382, + "TN": 18583.103448275862, + "TP": 2855.655172413793, + "n_pred": 3069.448275862069, + "n_ref": 3051.3793103448274 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7254561251086012, + "FN": 13, + "FP": 619, + "IoU": 0.569188820722563, + "TN": 11333, + "TP": 835, + "n_pred": 1454, + "n_ref": 848 + }, + "2": { + "Dice": 0.9226401703335699, + "FN": 42, + "FP": 67, + "IoU": 0.8563899868247694, + "TN": 12041, + "TP": 650, + "n_pred": 717, + "n_ref": 692 + }, + "3": { + "Dice": 0.9805879090404881, + "FN": 30, + "FP": 5, + "IoU": 0.9619151251360174, + "TN": 11881, + "TP": 884, + "n_pred": 889, + "n_ref": 914 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient002_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8248878187588924, + "FN": 366, + "FP": 6034, + "IoU": 0.701965167178914, + "TN": 48926, + "TP": 15074, + "n_pred": 21108, + "n_ref": 15440 + }, + "2": { + "Dice": 0.7806668228312642, + "FN": 971, + "FP": 1838, + "IoU": 0.6402407786885246, + "TN": 62592, + "TP": 4999, + "n_pred": 6837, + "n_ref": 5970 + }, + "3": { + "Dice": 0.8697872340425532, + "FN": 329, + "FP": 2884, + "IoU": 0.7695783132530121, + "TN": 56456, + "TP": 10731, + "n_pred": 13615, + "n_ref": 11060 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6741706161137441, + "FN": 248, + "FP": 6352, + "IoU": 0.5084897229669347, + "TN": 31372, + "TP": 6828, + "n_pred": 13180, + "n_ref": 7076 + }, + "2": { + "Dice": 0.851016471286541, + "FN": 705, + "FP": 1303, + "IoU": 0.7406689913470231, + "TN": 37057, + "TP": 5735, + "n_pred": 7038, + "n_ref": 6440 + }, + "3": { + "Dice": 0.9589869916591037, + "FN": 519, + "FP": 430, + "IoU": 0.9212055795416805, + "TN": 32756, + "TP": 11095, + "n_pred": 11525, + "n_ref": 11614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9588945075852401, + "FN": 588, + "FP": 233, + "IoU": 0.9210349139174762, + "TN": 15203, + "TP": 9576, + "n_pred": 9809, + "n_ref": 10164 + }, + "2": { + "Dice": 0.8640651007952654, + "FN": 290, + "FP": 445, + "IoU": 0.760664278736568, + "TN": 22529, + "TP": 2336, + "n_pred": 2781, + "n_ref": 2626 + }, + "3": { + "Dice": 0.9779765082754939, + "FN": 285, + "FP": 45, + "IoU": 0.9569021810108398, + "TN": 17943, + "TP": 7327, + "n_pred": 7372, + "n_ref": 7612 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9781887150308203, + "FN": 134, + "FP": 50, + "IoU": 0.9573085846867749, + "TN": 14890, + "TP": 4126, + "n_pred": 4176, + "n_ref": 4260 + }, + "2": { + "Dice": 0.9133567337890264, + "FN": 307, + "FP": 162, + "IoU": 0.8405304318259096, + "TN": 16259, + "TP": 2472, + "n_pred": 2634, + "n_ref": 2779 + }, + "3": { + "Dice": 0.9808984047019311, + "FN": 29, + "FP": 153, + "IoU": 0.9625128733264675, + "TN": 14345, + "TP": 4673, + "n_pred": 4826, + "n_ref": 4702 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient019_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7672828564193467, + "FN": 714, + "FP": 1124, + "IoU": 0.6224322103533279, + "TN": 27132, + "TP": 3030, + "n_pred": 4154, + "n_ref": 3744 + }, + "2": { + "Dice": 0.9103312642124024, + "FN": 364, + "FP": 1095, + "IoU": 0.8354201917653694, + "TN": 23135, + "TP": 7406, + "n_pred": 8501, + "n_ref": 7770 + }, + "3": { + "Dice": 0.9134142341751393, + "FN": 381, + "FP": 147, + "IoU": 0.8406278297615454, + "TN": 28687, + "TP": 2785, + "n_pred": 2932, + "n_ref": 3166 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8607546447040797, + "FN": 621, + "FP": 106, + "IoU": 0.7555480833893746, + "TN": 16226, + "TP": 2247, + "n_pred": 2353, + "n_ref": 2868 + }, + "2": { + "Dice": 0.8560157790927022, + "FN": 157, + "FP": 792, + "IoU": 0.7482758620689656, + "TN": 15430, + "TP": 2821, + "n_pred": 3613, + "n_ref": 2978 + }, + "3": { + "Dice": 0.8726467331118494, + "FN": 176, + "FP": 629, + "IoU": 0.7740667976424361, + "TN": 15637, + "TP": 2758, + "n_pred": 3387, + "n_ref": 2934 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient030_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8905761500669942, + "FN": 39, + "FP": 206, + "IoU": 0.8027375201288245, + "TN": 24358, + "TP": 997, + "n_pred": 1203, + "n_ref": 1036 + }, + "2": { + "Dice": 0.9603614705278292, + "FN": 42, + "FP": 151, + "IoU": 0.9237455551165548, + "TN": 23069, + "TP": 2338, + "n_pred": 2489, + "n_ref": 2380 + }, + "3": { + "Dice": 0.9304347826086956, + "FN": 80, + "FP": 16, + "IoU": 0.8699186991869918, + "TN": 24862, + "TP": 642, + "n_pred": 658, + "n_ref": 722 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient036_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient036_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8858075040783034, + "FN": 110, + "FP": 30, + "IoU": 0.7950219619326501, + "TN": 31317, + "TP": 543, + "n_pred": 573, + "n_ref": 653 + }, + "2": { + "Dice": 0.9205562142934138, + "FN": 175, + "FP": 562, + "IoU": 0.8528060714999002, + "TN": 26993, + "TP": 4270, + "n_pred": 4832, + "n_ref": 4445 + }, + "3": { + "Dice": 0.7646198830409356, + "FN": 281, + "FP": 41, + "IoU": 0.6189349112426036, + "TN": 31155, + "TP": 523, + "n_pred": 564, + "n_ref": 804 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7018477920450986, + "FN": 1473, + "FP": 431, + "IoU": 0.5406513872135102, + "TN": 21455, + "TP": 2241, + "n_pred": 2672, + "n_ref": 3714 + }, + "2": { + "Dice": 0.9007972384318238, + "FN": 528, + "FP": 679, + "IoU": 0.819500523403619, + "TN": 18913, + "TP": 5480, + "n_pred": 6159, + "n_ref": 6008 + }, + "3": { + "Dice": 0.9550513079924845, + "FN": 224, + "FP": 87, + "IoU": 0.913969571230982, + "TN": 21985, + "TP": 3304, + "n_pred": 3391, + "n_ref": 3528 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient038_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8748869460355743, + "FN": 373, + "FP": 42, + "IoU": 0.777599142550911, + "TN": 23734, + "TP": 1451, + "n_pred": 1493, + "n_ref": 1824 + }, + "2": { + "Dice": 0.9434599887353234, + "FN": 766, + "FP": 539, + "IoU": 0.8929713770196014, + "TN": 13407, + "TP": 10888, + "n_pred": 11427, + "n_ref": 11654 + }, + "3": { + "Dice": 0.943760167325122, + "FN": 189, + "FP": 295, + "IoU": 0.8935093509350935, + "TN": 21055, + "TP": 4061, + "n_pred": 4356, + "n_ref": 4250 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient040_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8902337228714524, + "FN": 377, + "FP": 149, + "IoU": 0.8021812711545694, + "TN": 10141, + "TP": 2133, + "n_pred": 2282, + "n_ref": 2510 + }, + "2": { + "Dice": 0.9013532065110806, + "FN": 264, + "FP": 239, + "IoU": 0.8204212781149589, + "TN": 9999, + "TP": 2298, + "n_pred": 2537, + "n_ref": 2562 + }, + "3": { + "Dice": 0.9575122039414211, + "FN": 180, + "FP": 55, + "IoU": 0.9184876864377385, + "TN": 9917, + "TP": 2648, + "n_pred": 2703, + "n_ref": 2828 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient041_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient041_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9682348210695617, + "FN": 114, + "FP": 44, + "IoU": 0.9384255650818394, + "TN": 10234, + "TP": 2408, + "n_pred": 2452, + "n_ref": 2522 + }, + "2": { + "Dice": 0.9250785105428443, + "FN": 13, + "FP": 154, + "IoU": 0.8606010016694491, + "TN": 11602, + "TP": 1031, + "n_pred": 1185, + "n_ref": 1044 + }, + "3": { + "Dice": 0.9348659003831418, + "FN": 80, + "FP": 5, + "IoU": 0.8776978417266187, + "TN": 12105, + "TP": 610, + "n_pred": 615, + "n_ref": 690 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7214524605828954, + "FN": 571, + "FP": 12, + "IoU": 0.5642750373692078, + "TN": 11462, + "TP": 755, + "n_pred": 767, + "n_ref": 1326 + }, + "2": { + "Dice": 0.8623092236230923, + "FN": 283, + "FP": 547, + "IoU": 0.757946923301254, + "TN": 9371, + "TP": 2599, + "n_pred": 3146, + "n_ref": 2882 + }, + "3": { + "Dice": 0.7786629719431937, + "FN": 1250, + "FP": 28, + "IoU": 0.6375496313102665, + "TN": 9274, + "TP": 2248, + "n_pred": 2276, + "n_ref": 3498 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9590305828043855, + "FN": 198, + "FP": 86, + "IoU": 0.9212860310421286, + "TN": 15592, + "TP": 3324, + "n_pred": 3410, + "n_ref": 3522 + }, + "2": { + "Dice": 0.9039484738168581, + "FN": 270, + "FP": 416, + "IoU": 0.8247317322432295, + "TN": 15286, + "TP": 3228, + "n_pred": 3644, + "n_ref": 3498 + }, + "3": { + "Dice": 0.972338642078793, + "FN": 170, + "FP": 193, + "IoU": 0.9461663947797716, + "TN": 12457, + "TP": 6380, + "n_pred": 6573, + "n_ref": 6550 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9618930547019053, + "FN": 13, + "FP": 111, + "IoU": 0.9265837773830669, + "TN": 11111, + "TP": 1565, + "n_pred": 1676, + "n_ref": 1578 + }, + "2": { + "Dice": 0.9113355780022446, + "FN": 12, + "FP": 67, + "IoU": 0.8371134020618557, + "TN": 12315, + "TP": 406, + "n_pred": 473, + "n_ref": 418 + }, + "3": { + "Dice": 0.9557021677662583, + "FN": 47, + "FP": 0, + "IoU": 0.9151624548736462, + "TN": 12246, + "TP": 507, + "n_pred": 507, + "n_ref": 554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient056_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient056_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7640578599482709, + "FN": 230, + "FP": 2233, + "IoU": 0.6181987288792435, + "TN": 12749, + "TP": 3988, + "n_pred": 6221, + "n_ref": 4218 + }, + "2": { + "Dice": 0.8816666666666667, + "FN": 193, + "FP": 375, + "IoU": 0.7883755588673621, + "TN": 16516, + "TP": 2116, + "n_pred": 2491, + "n_ref": 2309 + }, + "3": { + "Dice": 0.9653063937259072, + "FN": 222, + "FP": 39, + "IoU": 0.932939362795478, + "TN": 15308, + "TP": 3631, + "n_pred": 3670, + "n_ref": 3853 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9733135656041513, + "FN": 180, + "FP": 36, + "IoU": 0.948014440433213, + "TN": 8645, + "TP": 3939, + "n_pred": 3975, + "n_ref": 4119 + }, + "2": { + "Dice": 0.8515850144092219, + "FN": 36, + "FP": 170, + "IoU": 0.7415307402760352, + "TN": 12003, + "TP": 591, + "n_pred": 761, + "n_ref": 627 + }, + "3": { + "Dice": 0.9645021645021645, + "FN": 5, + "FP": 36, + "IoU": 0.931438127090301, + "TN": 12202, + "TP": 557, + "n_pred": 593, + "n_ref": 562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient075_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient075_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9266598044261452, + "FN": 511, + "FP": 59, + "IoU": 0.8633421241908416, + "TN": 8629, + "TP": 3601, + "n_pred": 3660, + "n_ref": 4112 + }, + "2": { + "Dice": 0.9754098360655737, + "FN": 7, + "FP": 11, + "IoU": 0.952, + "TN": 12425, + "TP": 357, + "n_pred": 368, + "n_ref": 364 + }, + "3": { + "Dice": 0.9879518072289156, + "FN": 4, + "FP": 0, + "IoU": 0.9761904761904762, + "TN": 12632, + "TP": 164, + "n_pred": 164, + "n_ref": 168 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient077_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9284963196635121, + "FN": 86, + "FP": 50, + "IoU": 0.8665358194308145, + "TN": 5381, + "TP": 883, + "n_pred": 933, + "n_ref": 969 + }, + "3": { + "Dice": 0.9811460258780037, + "FN": 38, + "FP": 13, + "IoU": 0.9629898403483309, + "TN": 5022, + "TP": 1327, + "n_pred": 1340, + "n_ref": 1365 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9225799729082005, + "FN": 485, + "FP": 258, + "IoU": 0.8562862669245648, + "TN": 7630, + "TP": 4427, + "n_pred": 4685, + "n_ref": 4912 + }, + "2": { + "Dice": 0.8441740758072064, + "FN": 120, + "FP": 213, + "IoU": 0.7303643724696356, + "TN": 11565, + "TP": 902, + "n_pred": 1115, + "n_ref": 1022 + }, + "3": { + "Dice": 0.8953771289537713, + "FN": 32, + "FP": 312, + "IoU": 0.8105726872246696, + "TN": 10984, + "TP": 1472, + "n_pred": 1784, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient081_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9732309298337186, + "FN": 159, + "FP": 200, + "IoU": 0.9478576615831518, + "TN": 5915, + "TP": 6526, + "n_pred": 6726, + "n_ref": 6685 + }, + "2": { + "Dice": 0.9218151995626025, + "FN": 220, + "FP": 66, + "IoU": 0.8549695740365112, + "TN": 10828, + "TP": 1686, + "n_pred": 1752, + "n_ref": 1906 + }, + "3": { + "Dice": 0.982094755189352, + "FN": 39, + "FP": 74, + "IoU": 0.9648194271481942, + "TN": 9588, + "TP": 3099, + "n_pred": 3173, + "n_ref": 3138 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9686113393590797, + "FN": 293, + "FP": 280, + "IoU": 0.9391332058636074, + "TN": 16186, + "TP": 8841, + "n_pred": 9121, + "n_ref": 9134 + }, + "2": { + "Dice": 0.8415213946117274, + "FN": 545, + "FP": 455, + "IoU": 0.7264021887824897, + "TN": 21945, + "TP": 2655, + "n_pred": 3110, + "n_ref": 3200 + }, + "3": { + "Dice": 0.9070754716981132, + "FN": 359, + "FP": 35, + "IoU": 0.8299525248165731, + "TN": 23283, + "TP": 1923, + "n_pred": 1958, + "n_ref": 2282 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9718519899338243, + "FN": 501, + "FP": 103, + "IoU": 0.9452452180219382, + "TN": 14569, + "TP": 10427, + "n_pred": 10530, + "n_ref": 10928 + }, + "2": { + "Dice": 0.7707567964731815, + "FN": 461, + "FP": 163, + "IoU": 0.6270173341303048, + "TN": 23927, + "TP": 1049, + "n_pred": 1212, + "n_ref": 1510 + }, + "3": { + "Dice": 0.939888050620589, + "FN": 185, + "FP": 62, + "IoU": 0.8865932047750229, + "TN": 23422, + "TP": 1931, + "n_pred": 1993, + "n_ref": 2116 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9683483068417416, + "FN": 772, + "FP": 144, + "IoU": 0.9386387995712755, + "TN": 17072, + "TP": 14012, + "n_pred": 14156, + "n_ref": 14784 + }, + "2": { + "Dice": 0.8431262824099981, + "FN": 706, + "FP": 135, + "IoU": 0.7287971622057401, + "TN": 28899, + "TP": 2260, + "n_pred": 2395, + "n_ref": 2966 + }, + "3": { + "Dice": 0.8078979843685726, + "FN": 104, + "FP": 363, + "IoU": 0.6777087646652864, + "TN": 30551, + "TP": 982, + "n_pred": 1345, + "n_ref": 1086 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9516348403242478, + "FN": 539, + "FP": 350, + "IoU": 0.9077322262584328, + "TN": 22365, + "TP": 8746, + "n_pred": 9096, + "n_ref": 9285 + }, + "2": { + "Dice": 0.8503694581280788, + "FN": 512, + "FP": 460, + "IoU": 0.7396893411890734, + "TN": 28266, + "TP": 2762, + "n_pred": 3222, + "n_ref": 3274 + }, + "3": { + "Dice": 0.9573268064275833, + "FN": 326, + "FP": 75, + "IoU": 0.9181465605225556, + "TN": 27101, + "TP": 4498, + "n_pred": 4573, + "n_ref": 4824 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9558052434456928, + "FN": 308, + "FP": 164, + "IoU": 0.9153515064562411, + "TN": 13624, + "TP": 5104, + "n_pred": 5268, + "n_ref": 5412 + }, + "2": { + "Dice": 0.933225086259387, + "FN": 181, + "FP": 148, + "IoU": 0.8748097412480974, + "TN": 16572, + "TP": 2299, + "n_pred": 2447, + "n_ref": 2480 + }, + "3": { + "Dice": 0.9109756097560976, + "FN": 27, + "FP": 119, + "IoU": 0.8365061590145577, + "TN": 18307, + "TP": 747, + "n_pred": 866, + "n_ref": 774 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient089_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9392501912777352, + "FN": 83, + "FP": 314, + "IoU": 0.8854587420657819, + "TN": 9334, + "TP": 3069, + "n_pred": 3383, + "n_ref": 3152 + }, + "2": { + "Dice": 0.8833172613307618, + "FN": 372, + "FP": 233, + "IoU": 0.7910189982728842, + "TN": 9905, + "TP": 2290, + "n_pred": 2523, + "n_ref": 2662 + }, + "3": { + "Dice": 0.9477882523567803, + "FN": 85, + "FP": 59, + "IoU": 0.9007580978635424, + "TN": 11349, + "TP": 1307, + "n_pred": 1366, + "n_ref": 1392 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.8944605495358386, + "FN": 305.5632183908046, + "FP": 265.3103448275862, + "IoU": 0.8189424509820699, + "TN": 14361.172413793103, + "TP": 2723.126436781609, + "n_pred": 2988.436781609196, + "n_ref": 3028.6896551724135 + }, + "mean": { + "1": { + "Dice": 0.8660995166887882, + "FN": 429.37931034482756, + "FP": 295.1034482758621, + "IoU": 0.7799020609065541, + "TN": 14084.724137931034, + "TP": 2845.9655172413795, + "n_pred": 3141.0689655172414, + "n_ref": 3275.344827586207 + }, + "2": { + "Dice": 0.8859711101704866, + "FN": 340.62068965517244, + "FP": 312.13793103448273, + "IoU": 0.7983076290314232, + "TN": 14326.310344827587, + "TP": 2676.103448275862, + "n_pred": 2988.2413793103447, + "n_ref": 3016.7241379310344 + }, + "3": { + "Dice": 0.9313110217482413, + "FN": 146.68965517241378, + "FP": 188.68965517241378, + "IoU": 0.8786176630082325, + "TN": 14672.48275862069, + "TP": 2647.310344827586, + "n_pred": 2836.0, + "n_ref": 2794.0 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.64, + "FN": 0, + "FP": 18, + "IoU": 0.47058823529411764, + "TN": 12766, + "TP": 16, + "n_pred": 34, + "n_ref": 16 + }, + "2": { + "Dice": 0.8775510204081632, + "FN": 60, + "FP": 300, + "IoU": 0.7818181818181819, + "TN": 11150, + "TP": 1290, + "n_pred": 1590, + "n_ref": 1350 + }, + "3": { + "Dice": 0.9604452395150069, + "FN": 197, + "FP": 2, + "IoU": 0.9239005736137668, + "TN": 10185, + "TP": 2416, + "n_pred": 2418, + "n_ref": 2613 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9762532981530343, + "FN": 28, + "FP": 8, + "IoU": 0.9536082474226805, + "TN": 12024, + "TP": 740, + "n_pred": 748, + "n_ref": 768 + }, + "2": { + "Dice": 0.915168100078186, + "FN": 93, + "FP": 341, + "IoU": 0.8436036036036036, + "TN": 10025, + "TP": 2341, + "n_pred": 2682, + "n_ref": 2434 + }, + "3": { + "Dice": 0.9674086828188415, + "FN": 187, + "FP": 78, + "IoU": 0.9368747022391615, + "TN": 8602, + "TP": 3933, + "n_pred": 4011, + "n_ref": 4120 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7484433374844334, + "FN": 33, + "FP": 371, + "IoU": 0.5980099502487563, + "TN": 11795, + "TP": 601, + "n_pred": 972, + "n_ref": 634 + }, + "2": { + "Dice": 0.9003775776938716, + "FN": 144, + "FP": 199, + "IoU": 0.8188061278394083, + "TN": 10907, + "TP": 1550, + "n_pred": 1749, + "n_ref": 1694 + }, + "3": { + "Dice": 0.9684947491248541, + "FN": 177, + "FP": 66, + "IoU": 0.9389140271493213, + "TN": 8822, + "TP": 3735, + "n_pred": 3801, + "n_ref": 3912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9807054196878456, + "FN": 126, + "FP": 31, + "IoU": 0.9621413069688932, + "TN": 8653, + "TP": 3990, + "n_pred": 4021, + "n_ref": 4116 + }, + "2": { + "Dice": 0.903899721448468, + "FN": 11, + "FP": 127, + "IoU": 0.8246505717916137, + "TN": 12013, + "TP": 649, + "n_pred": 776, + "n_ref": 660 + }, + "3": { + "Dice": 0.9299895506792059, + "FN": 67, + "FP": 0, + "IoU": 0.869140625, + "TN": 12288, + "TP": 445, + "n_pred": 445, + "n_ref": 512 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9328521227087093, + "FN": 347, + "FP": 360, + "IoU": 0.8741545033819865, + "TN": 13582, + "TP": 4911, + "n_pred": 5271, + "n_ref": 5258 + }, + "2": { + "Dice": 0.8903479973736047, + "FN": 218, + "FP": 283, + "IoU": 0.8023668639053254, + "TN": 16665, + "TP": 2034, + "n_pred": 2317, + "n_ref": 2252 + }, + "3": { + "Dice": 0.9629629629629629, + "FN": 91, + "FP": 162, + "IoU": 0.9285714285714286, + "TN": 15658, + "TP": 3289, + "n_pred": 3451, + "n_ref": 3380 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.981275599765945, + "FN": 44, + "FP": 84, + "IoU": 0.9632395175186674, + "TN": 15718, + "TP": 3354, + "n_pred": 3438, + "n_ref": 3398 + }, + "2": { + "Dice": 0.9005360333531864, + "FN": 366, + "FP": 302, + "IoU": 0.819068255687974, + "TN": 15508, + "TP": 3024, + "n_pred": 3326, + "n_ref": 3390 + }, + "3": { + "Dice": 0.9779026695618853, + "FN": 218, + "FP": 128, + "IoU": 0.9567608097975506, + "TN": 11198, + "TP": 7656, + "n_pred": 7784, + "n_ref": 7874 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9297077738914589, + "FN": 176, + "FP": 447, + "IoU": 0.8686485346826903, + "TN": 14457, + "TP": 4120, + "n_pred": 4567, + "n_ref": 4296 + }, + "2": { + "Dice": 0.9214413607878246, + "FN": 471, + "FP": 231, + "IoU": 0.8543266237808674, + "TN": 14381, + "TP": 4117, + "n_pred": 4348, + "n_ref": 4588 + }, + "3": { + "Dice": 0.9735449735449735, + "FN": 116, + "FP": 89, + "IoU": 0.9484536082474226, + "TN": 15223, + "TP": 3772, + "n_pred": 3861, + "n_ref": 3888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7800872999376429, + "FN": 2041, + "FP": 75, + "IoU": 0.6394615777815642, + "TN": 13331, + "TP": 3753, + "n_pred": 3828, + "n_ref": 5794 + }, + "2": { + "Dice": 0.8858218318695107, + "FN": 187, + "FP": 450, + "IoU": 0.795045045045045, + "TN": 16092, + "TP": 2471, + "n_pred": 2921, + "n_ref": 2658 + }, + "3": { + "Dice": 0.9818431911966987, + "FN": 176, + "FP": 88, + "IoU": 0.9643339637935693, + "TN": 11798, + "TP": 7138, + "n_pred": 7226, + "n_ref": 7314 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9013409961685823, + "FN": 137, + "FP": 69, + "IoU": 0.8204010462074979, + "TN": 24453, + "TP": 941, + "n_pred": 1010, + "n_ref": 1078 + }, + "2": { + "Dice": 0.9027576197387518, + "FN": 1787, + "FP": 826, + "IoU": 0.8227513227513228, + "TN": 10858, + "TP": 12129, + "n_pred": 12955, + "n_ref": 13916 + }, + "3": { + "Dice": 0.7972520107238605, + "FN": 175, + "FP": 1035, + "IoU": 0.6628587350236835, + "TN": 22011, + "TP": 2379, + "n_pred": 3414, + "n_ref": 2554 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8911143481427531, + "FN": 496, + "FP": 102, + "IoU": 0.8036124794745484, + "TN": 28955, + "TP": 2447, + "n_pred": 2549, + "n_ref": 2943 + }, + "2": { + "Dice": 0.8957355641705774, + "FN": 536, + "FP": 1508, + "IoU": 0.811160384331116, + "TN": 21176, + "TP": 8780, + "n_pred": 10288, + "n_ref": 9316 + }, + "3": { + "Dice": 0.7143129407280351, + "FN": 165, + "FP": 1334, + "IoU": 0.5555884968870441, + "TN": 28627, + "TP": 1874, + "n_pred": 3208, + "n_ref": 2039 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8799556418075963, + "FN": 361, + "FP": 72, + "IoU": 0.7856435643564357, + "TN": 10780, + "TP": 1587, + "n_pred": 1659, + "n_ref": 1948 + }, + "2": { + "Dice": 0.8573121943991703, + "FN": 639, + "FP": 324, + "IoU": 0.7502593360995851, + "TN": 8944, + "TP": 2893, + "n_pred": 3217, + "n_ref": 3532 + }, + "3": { + "Dice": 0.9553645688938176, + "FN": 178, + "FP": 144, + "IoU": 0.9145435244161358, + "TN": 9032, + "TP": 3446, + "n_pred": 3590, + "n_ref": 3624 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6658905704307334, + "FN": 574, + "FP": 0, + "IoU": 0.49912739965095987, + "TN": 18054, + "TP": 572, + "n_pred": 572, + "n_ref": 1146 + }, + "2": { + "Dice": 0.9373919830517924, + "FN": 574, + "FP": 549, + "IoU": 0.8821615949632738, + "TN": 9670, + "TP": 8407, + "n_pred": 8956, + "n_ref": 8981 + }, + "3": { + "Dice": 0.9196200219218122, + "FN": 210, + "FP": 230, + "IoU": 0.8512005410889415, + "TN": 16243, + "TP": 2517, + "n_pred": 2747, + "n_ref": 2727 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6924498090897894, + "FN": 2471, + "FP": 26, + "IoU": 0.529577995478523, + "TN": 13892, + "TP": 2811, + "n_pred": 2837, + "n_ref": 5282 + }, + "2": { + "Dice": 0.9174231332357248, + "FN": 197, + "FP": 367, + "IoU": 0.8474438734108737, + "TN": 15503, + "TP": 3133, + "n_pred": 3500, + "n_ref": 3330 + }, + "3": { + "Dice": 0.9678401522359658, + "FN": 69, + "FP": 100, + "IoU": 0.9376843657817109, + "TN": 16488, + "TP": 2543, + "n_pred": 2643, + "n_ref": 2612 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient032_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient032_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9566710268149117, + "FN": 401, + "FP": 129, + "IoU": 0.9169409183513556, + "TN": 12819, + "TP": 5851, + "n_pred": 5980, + "n_ref": 6252 + }, + "2": { + "Dice": 0.8768078062380206, + "FN": 236, + "FP": 471, + "IoU": 0.7806391560657773, + "TN": 15977, + "TP": 2516, + "n_pred": 2987, + "n_ref": 2752 + }, + "3": { + "Dice": 0.9079497907949791, + "FN": 426, + "FP": 14, + "IoU": 0.8314176245210728, + "TN": 16590, + "TP": 2170, + "n_pred": 2184, + "n_ref": 2596 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.662873999157185, + "FN": 390, + "FP": 1210, + "IoU": 0.49574535140245823, + "TN": 28827, + "TP": 1573, + "n_pred": 2783, + "n_ref": 1963 + }, + "2": { + "Dice": 0.8792781580584941, + "FN": 468, + "FP": 696, + "IoU": 0.784564131038312, + "TN": 26597, + "TP": 4239, + "n_pred": 4935, + "n_ref": 4707 + }, + "3": { + "Dice": 0.9628579026682031, + "FN": 213, + "FP": 206, + "IoU": 0.9283760683760683, + "TN": 26150, + "TP": 5431, + "n_pred": 5637, + "n_ref": 5644 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8529136218849541, + "FN": 182, + "FP": 603, + "IoU": 0.743547860176413, + "TN": 3339, + "TP": 2276, + "n_pred": 2879, + "n_ref": 2458 + }, + "2": { + "Dice": 0.8975741239892183, + "FN": 140, + "FP": 12, + "IoU": 0.8141809290953546, + "TN": 5582, + "TP": 666, + "n_pred": 678, + "n_ref": 806 + }, + "3": { + "Dice": 0.9686552072800809, + "FN": 2, + "FP": 60, + "IoU": 0.9392156862745098, + "TN": 5380, + "TP": 958, + "n_pred": 1018, + "n_ref": 960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient044_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient044_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6323071601521965, + "FN": 16, + "FP": 1047, + "IoU": 0.46231664137582196, + "TN": 10823, + "TP": 914, + "n_pred": 1961, + "n_ref": 930 + }, + "2": { + "Dice": 0.8687305015598752, + "FN": 398, + "FP": 149, + "IoU": 0.7679253288078065, + "TN": 10443, + "TP": 1810, + "n_pred": 1959, + "n_ref": 2208 + }, + "3": { + "Dice": 0.951633432329232, + "FN": 151, + "FP": 77, + "IoU": 0.9077296641036018, + "TN": 10329, + "TP": 2243, + "n_pred": 2320, + "n_ref": 2394 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient054_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient054_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9589507749957418, + "FN": 11, + "FP": 230, + "IoU": 0.9211387434554974, + "TN": 9744, + "TP": 2815, + "n_pred": 3045, + "n_ref": 2826 + }, + "2": { + "Dice": 0.9307384087006296, + "FN": 91, + "FP": 30, + "IoU": 0.8704496788008566, + "TN": 11866, + "TP": 813, + "n_pred": 843, + "n_ref": 904 + }, + "3": { + "Dice": 0.9870302627203192, + "FN": 20, + "FP": 19, + "IoU": 0.9743926460932371, + "TN": 11277, + "TP": 1484, + "n_pred": 1503, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9669731018045625, + "FN": 0, + "FP": 97, + "IoU": 0.9360580092287409, + "TN": 17683, + "TP": 1420, + "n_pred": 1517, + "n_ref": 1420 + }, + "2": { + "Dice": 0.9460556844547564, + "FN": 95, + "FP": 91, + "IoU": 0.8976334617501376, + "TN": 17383, + "TP": 1631, + "n_pred": 1722, + "n_ref": 1726 + }, + "3": { + "Dice": 0.9516598718695399, + "FN": 71, + "FP": 12, + "IoU": 0.9077777777777778, + "TN": 18300, + "TP": 817, + "n_pred": 829, + "n_ref": 888 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient072_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9730783286636618, + "FN": 120, + "FP": 101, + "IoU": 0.9475682087781732, + "TN": 2185, + "TP": 3994, + "n_pred": 4095, + "n_ref": 4114 + }, + "2": { + "Dice": 0.9142545057345712, + "FN": 133, + "FP": 24, + "IoU": 0.8420523138832998, + "TN": 5406, + "TP": 837, + "n_pred": 861, + "n_ref": 970 + }, + "3": { + "Dice": 0.9703989703989704, + "FN": 10, + "FP": 36, + "IoU": 0.9425, + "TN": 5600, + "TP": 754, + "n_pred": 790, + "n_ref": 764 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9231319270647121, + "FN": 184, + "FP": 31, + "IoU": 0.8572377158034529, + "TN": 11294, + "TP": 1291, + "n_pred": 1322, + "n_ref": 1475 + }, + "2": { + "Dice": 0.9150119142176331, + "FN": 98, + "FP": 9, + "IoU": 0.8433382137628112, + "TN": 12117, + "TP": 576, + "n_pred": 585, + "n_ref": 674 + }, + "3": { + "Dice": 0.9665948275862069, + "FN": 4, + "FP": 58, + "IoU": 0.935349322210636, + "TN": 11841, + "TP": 897, + "n_pred": 955, + "n_ref": 901 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient078_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient078_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9539981475764124, + "FN": 31, + "FP": 118, + "IoU": 0.9120425029515938, + "TN": 17506, + "TP": 1545, + "n_pred": 1663, + "n_ref": 1576 + }, + "2": { + "Dice": 0.9459119496855346, + "FN": 40, + "FP": 89, + "IoU": 0.8973747016706444, + "TN": 17943, + "TP": 1128, + "n_pred": 1217, + "n_ref": 1168 + }, + "3": { + "Dice": 0.9737914967967385, + "FN": 22, + "FP": 23, + "IoU": 0.9489216799091941, + "TN": 18319, + "TP": 836, + "n_pred": 859, + "n_ref": 858 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.934869641636559, + "FN": 257, + "FP": 410, + "IoU": 0.8777044371103777, + "TN": 20146, + "TP": 4787, + "n_pred": 5197, + "n_ref": 5044 + }, + "2": { + "Dice": 0.8321521820216338, + "FN": 595, + "FP": 305, + "IoU": 0.7125519003513254, + "TN": 22469, + "TP": 2231, + "n_pred": 2536, + "n_ref": 2826 + }, + "3": { + "Dice": 0.9704319185567782, + "FN": 142, + "FP": 253, + "IoU": 0.9425621637341864, + "TN": 18723, + "TP": 6482, + "n_pred": 6735, + "n_ref": 6624 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8113000548546352, + "FN": 137, + "FP": 1927, + "IoU": 0.6825103830179973, + "TN": 25499, + "TP": 4437, + "n_pred": 6364, + "n_ref": 4574 + }, + "2": { + "Dice": 0.8295081967213115, + "FN": 671, + "FP": 681, + "IoU": 0.7086834733893558, + "TN": 27359, + "TP": 3289, + "n_pred": 3970, + "n_ref": 3960 + }, + "3": { + "Dice": 0.8716990533134031, + "FN": 127, + "FP": 903, + "IoU": 0.7725767277544712, + "TN": 27471, + "TP": 3499, + "n_pred": 4402, + "n_ref": 3626 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8810664903872638, + "FN": 1389, + "FP": 770, + "IoU": 0.7874163056321386, + "TN": 15444, + "TP": 7997, + "n_pred": 8767, + "n_ref": 9386 + }, + "2": { + "Dice": 0.7126527394560505, + "FN": 552, + "FP": 177, + "IoU": 0.5535823637477036, + "TN": 23967, + "TP": 904, + "n_pred": 1081, + "n_ref": 1456 + }, + "3": { + "Dice": 0.8117117117117117, + "FN": 313, + "FP": 105, + "IoU": 0.6830932524639879, + "TN": 24281, + "TP": 901, + "n_pred": 1006, + "n_ref": 1214 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9356453779460252, + "FN": 479, + "FP": 48, + "IoU": 0.8790729692519504, + "TN": 8442, + "TP": 3831, + "n_pred": 3879, + "n_ref": 4310 + }, + "2": { + "Dice": 0.8946635730858469, + "FN": 53, + "FP": 174, + "IoU": 0.8094038623005877, + "TN": 11609, + "TP": 964, + "n_pred": 1138, + "n_ref": 1017 + }, + "3": { + "Dice": 0.9794608472400513, + "FN": 82, + "FP": 14, + "IoU": 0.959748427672956, + "TN": 10415, + "TP": 2289, + "n_pred": 2303, + "n_ref": 2371 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient092_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8785260068481983, + "FN": 1405, + "FP": 85, + "IoU": 0.783367257923815, + "TN": 5922, + "TP": 5388, + "n_pred": 5473, + "n_ref": 6793 + }, + "2": { + "Dice": 0.8465218991534781, + "FN": 261, + "FP": 156, + "IoU": 0.7338864071474155, + "TN": 11233, + "TP": 1150, + "n_pred": 1306, + "n_ref": 1411 + }, + "3": { + "Dice": 0.9505351460804166, + "FN": 32, + "FP": 139, + "IoU": 0.9057331863285557, + "TN": 10986, + "TP": 1643, + "n_pred": 1782, + "n_ref": 1675 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient096_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.928404590230527, + "FN": 616, + "FP": 89, + "IoU": 0.8663760424564063, + "TN": 13924, + "TP": 4571, + "n_pred": 4660, + "n_ref": 5187 + }, + "2": { + "Dice": 0.8115653040877367, + "FN": 764, + "FP": 181, + "IoU": 0.6828859060402684, + "TN": 16220, + "TP": 2035, + "n_pred": 2216, + "n_ref": 2799 + }, + "3": { + "Dice": 0.7753164556962026, + "FN": 613, + "FP": 97, + "IoU": 0.6330749354005168, + "TN": 17265, + "TP": 1225, + "n_pred": 1322, + "n_ref": 1838 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_2904350/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset436_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-90__qs-45_revision__unc-pred_entropy__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.8929799151991924, + "FN": 286.8232950191571, + "FP": 314.30390804597704, + "IoU": 0.8163020877945298, + "TN": 16404.73517241379, + "TP": 2719.3790038314173, + "n_pred": 3033.682911877395, + "n_ref": 3006.2022988505746 + }, + "mean": { + "1": { + "Dice": 0.8607411566619984, + "FN": 442.9613793103448, + "FP": 411.6013793103448, + "IoU": 0.7711996391253779, + "TN": 15862.062298850575, + "TP": 3008.6163218390807, + "n_pred": 3420.2177011494255, + "n_ref": 3451.5777011494256 + }, + "2": { + "Dice": 0.8865665356112693, + "FN": 281.68045977011496, + "FP": 339.2542528735632, + "IoU": 0.7995695520106033, + "TN": 16621.19126436782, + "TP": 2483.1154022988508, + "n_pred": 2822.369655172414, + "n_ref": 2764.7958620689656 + }, + "3": { + "Dice": 0.9316320533243093, + "FN": 135.82804597701147, + "FP": 192.05609195402297, + "IoU": 0.878137072247608, + "TN": 16730.95195402299, + "TP": 2666.405287356322, + "n_pred": 2858.4613793103445, + "n_ref": 2802.233333333333 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_001/summary_cross_val.json b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_001/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..6b10367ed63dae35bcb685f87634f92c6d173a7e --- /dev/null +++ b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_001/summary_cross_val.json @@ -0,0 +1,2256 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.7407884981090995, + "FN": 226.30303030303025, + "FP": 78.7878787878788, + "IoU": 0.6546615607638132, + "TN": 6731.545454545455, + "TP": 527.0, + "n_pred": 605.7878787878788, + "n_ref": 753.3030303030304 + }, + "mean": { + "1": { + "Dice": 0.5748625913078985, + "FN": 546.1818181818181, + "FP": 167.36363636363637, + "IoU": 0.4706350083863494, + "TN": 6046.636363636364, + "TP": 803.4545454545455, + "n_pred": 970.8181818181819, + "n_ref": 1349.6363636363637 + }, + "2": { + "Dice": 0.8460749843644289, + "FN": 120.18181818181819, + "FP": 43.18181818181818, + "IoU": 0.739449482270471, + "TN": 6953.0, + "TP": 447.27272727272725, + "n_pred": 490.45454545454544, + "n_ref": 567.4545454545455 + }, + "3": { + "Dice": 0.801427918654971, + "FN": 12.545454545454545, + "FP": 25.818181818181817, + "IoU": 0.7539001916346194, + "TN": 7195.0, + "TP": 330.27272727272725, + "n_pred": 356.09090909090907, + "n_ref": 342.8181818181818 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.19655629139072847, + "FN": 3027, + "FP": 6, + "IoU": 0.10898942420681551, + "TN": 9396, + "TP": 371, + "n_pred": 377, + "n_ref": 3398 + }, + "2": { + "Dice": 0.9215686274509803, + "FN": 24, + "FP": 56, + "IoU": 0.8545454545454545, + "TN": 12250, + "TP": 470, + "n_pred": 526, + "n_ref": 494 + }, + "3": { + "Dice": 0.8817204301075269, + "FN": 23, + "FP": 10, + "IoU": 0.7884615384615384, + "TN": 12644, + "TP": 123, + "n_pred": 133, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5111476179300634, + "FN": 1959, + "FP": 124, + "IoU": 0.34331651954602777, + "TN": 3228, + "TP": 1089, + "n_pred": 1213, + "n_ref": 3048 + }, + "2": { + "Dice": 0.8796920115495669, + "FN": 242, + "FP": 8, + "IoU": 0.7852233676975945, + "TN": 5236, + "TP": 914, + "n_pred": 922, + "n_ref": 1156 + }, + "3": { + "Dice": 0.9631875270679948, + "FN": 0, + "FP": 85, + "IoU": 0.9289891395154553, + "TN": 5203, + "TP": 1112, + "n_pred": 1197, + "n_ref": 1112 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 45, + "IoU": 0.0, + "TN": 6355, + "TP": 0, + "n_pred": 45, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 8, + "IoU": 0.0, + "TN": 6392, + "TP": 0, + "n_pred": 8, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7763157894736842, + "FN": 226, + "FP": 46, + "IoU": 0.6344086021505376, + "TN": 5656, + "TP": 472, + "n_pred": 518, + "n_ref": 698 + }, + "2": { + "Dice": 0.7648221343873518, + "FN": 662, + "FP": 52, + "IoU": 0.6192, + "TN": 4525, + "TP": 1161, + "n_pred": 1213, + "n_ref": 1823 + }, + "3": { + "Dice": 0.9587628865979382, + "FN": 54, + "FP": 10, + "IoU": 0.9207920792079208, + "TN": 5592, + "TP": 744, + "n_pred": 754, + "n_ref": 798 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8255761409850881, + "FN": 170, + "FP": 602, + "IoU": 0.7029626779530589, + "TN": 3801, + "TP": 1827, + "n_pred": 2429, + "n_ref": 1997 + }, + "2": { + "Dice": 0.878595806923452, + "FN": 131, + "FP": 118, + "IoU": 0.7834782608695652, + "TN": 5250, + "TP": 901, + "n_pred": 1019, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9343863912515188, + "FN": 37, + "FP": 71, + "IoU": 0.8768529076396807, + "TN": 5523, + "TP": 769, + "n_pred": 840, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9218500797448166, + "FN": 68, + "FP": 30, + "IoU": 0.8550295857988166, + "TN": 5724, + "TP": 578, + "n_pred": 608, + "n_ref": 646 + }, + "3": { + "Dice": 0.9655937846836848, + "FN": 21, + "FP": 10, + "IoU": 0.9334763948497854, + "TN": 5934, + "TP": 435, + "n_pred": 445, + "n_ref": 456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8161451583040178, + "FN": 65, + "FP": 928, + "IoU": 0.6893963090397247, + "TN": 3203, + "TP": 2204, + "n_pred": 3132, + "n_ref": 2269 + }, + "2": { + "Dice": 0.8273716951788491, + "FN": 181, + "FP": 152, + "IoU": 0.7055702917771883, + "TN": 5269, + "TP": 798, + "n_pred": 950, + "n_ref": 979 + }, + "3": { + "Dice": 0.9063444108761329, + "FN": 3, + "FP": 90, + "IoU": 0.8287292817679558, + "TN": 5857, + "TP": 450, + "n_pred": 540, + "n_ref": 453 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8982971410717075, + "FN": 561, + "FP": 90, + "IoU": 0.8153715258082813, + "TN": 9274, + "TP": 2875, + "n_pred": 2965, + "n_ref": 3436 + }, + "2": { + "Dice": 0.7286245353159851, + "FN": 14, + "FP": 59, + "IoU": 0.5730994152046783, + "TN": 12629, + "TP": 98, + "n_pred": 157, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.40763574906812217, + "FN": 227.5151515151515, + "FP": 50.54545454545454, + "IoU": 0.31691628638355235, + "TN": 6431.787878787879, + "TP": 271.969696969697, + "n_pred": 322.5151515151515, + "n_ref": 499.4848484848485 + }, + "mean": { + "1": { + "Dice": 0.24858767757857203, + "FN": 126.36363636363636, + "FP": 81.9090909090909, + "IoU": 0.1764730683254129, + "TN": 6710.636363636364, + "TP": 62.90909090909091, + "n_pred": 144.8181818181818, + "n_ref": 189.27272727272728 + }, + "2": { + "Dice": 0.42472383210573844, + "FN": 140.36363636363637, + "FP": 59.09090909090909, + "IoU": 0.3351448734415081, + "TN": 6548.454545454545, + "TP": 233.9090909090909, + "n_pred": 293.0, + "n_ref": 374.27272727272725 + }, + "3": { + "Dice": 0.549595737520056, + "FN": 415.8181818181818, + "FP": 10.636363636363637, + "IoU": 0.439130917383736, + "TN": 6036.272727272727, + "TP": 519.0909090909091, + "n_pred": 529.7272727272727, + "n_ref": 934.9090909090909 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7360644728005373, + "FN": 86, + "FP": 307, + "IoU": 0.5823591923485654, + "TN": 5459, + "TP": 548, + "n_pred": 855, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 17, + "IoU": 0.0, + "TN": 6383, + "TP": 0, + "n_pred": 17, + "n_ref": 0 + }, + "2": { + "Dice": 0.32638389647735444, + "FN": 653, + "FP": 284, + "IoU": 0.1950171821305842, + "TN": 5236, + "TP": 227, + "n_pred": 511, + "n_ref": 880 + }, + "3": { + "Dice": 0.26936026936026936, + "FN": 2604, + "FP": 0, + "IoU": 0.1556420233463035, + "TN": 3316, + "TP": 480, + "n_pred": 480, + "n_ref": 3084 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 551, + "IoU": 0.0, + "TN": 12249, + "TP": 0, + "n_pred": 551, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 41, + "IoU": 0.0, + "TN": 6359, + "TP": 0, + "n_pred": 41, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.48484848484848486, + "FN": 8, + "FP": 26, + "IoU": 0.32, + "TN": 6350, + "TP": 16, + "n_pred": 42, + "n_ref": 24 + }, + "2": { + "Dice": 0.9167927382753404, + "FN": 173, + "FP": 102, + "IoU": 0.8463687150837989, + "TN": 4610, + "TP": 1515, + "n_pred": 1617, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9779036827195468, + "FN": 93, + "FP": 102, + "IoU": 0.9567627494456763, + "TN": 1890, + "TP": 4315, + "n_pred": 4417, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.27061310782241016, + "FN": 690, + "FP": 0, + "IoU": 0.15647921760391198, + "TN": 5582, + "TP": 128, + "n_pred": 128, + "n_ref": 818 + }, + "2": { + "Dice": 0.6752450980392157, + "FN": 456, + "FP": 74, + "IoU": 0.509713228492137, + "TN": 5319, + "TP": 551, + "n_pred": 625, + "n_ref": 1007 + }, + "3": { + "Dice": 0.6088207094918504, + "FN": 802, + "FP": 14, + "IoU": 0.4376292212267402, + "TN": 4949, + "TP": 635, + "n_pred": 649, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 606, + "FP": 0, + "IoU": 0.0, + "TN": 5794, + "TP": 0, + "n_pred": 0, + "n_ref": 606 + }, + "2": { + "Dice": 0.6299212598425197, + "FN": 262, + "FP": 67, + "IoU": 0.45977011494252873, + "TN": 5791, + "TP": 280, + "n_pred": 347, + "n_ref": 542 + }, + "3": { + "Dice": 0.3422982885085575, + "FN": 1075, + "FP": 1, + "IoU": 0.20648967551622419, + "TN": 5044, + "TP": 280, + "n_pred": 281, + "n_ref": 1355 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 82, + "IoU": 0.0, + "TN": 6318, + "TP": 0, + "n_pred": 82, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.610323796000254, + "FN": 8.96969696969697, + "FP": 41.42424242424243, + "IoU": 0.5663246450411545, + "TN": 6168.0, + "TP": 181.6060606060606, + "n_pred": 223.030303030303, + "n_ref": 190.5757575757576 + }, + "mean": { + "1": { + "Dice": 0.4826427771556551, + "FN": 2.5454545454545454, + "FP": 102.0909090909091, + "IoU": 0.46645021645021645, + "TN": 6138.636363636364, + "TP": 156.72727272727272, + "n_pred": 258.8181818181818, + "n_ref": 159.27272727272728 + }, + "2": { + "Dice": 0.863136530966955, + "FN": 20.272727272727273, + "FP": 10.0, + "IoU": 0.7612876897449106, + "TN": 6242.272727272727, + "TP": 127.45454545454545, + "n_pred": 137.45454545454547, + "n_ref": 147.72727272727272 + }, + "3": { + "Dice": 0.485192079878152, + "FN": 4.090909090909091, + "FP": 12.181818181818182, + "IoU": 0.4712360289283366, + "TN": 6123.090909090909, + "TP": 260.6363636363636, + "n_pred": 272.8181818181818, + "n_ref": 264.72727272727275 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1027, + "IoU": 0.0, + "TN": 5373, + "TP": 0, + "n_pred": 1027, + "n_ref": 0 + }, + "2": { + "Dice": 0.8242424242424242, + "FN": 29, + "FP": 29, + "IoU": 0.7010309278350515, + "TN": 6206, + "TP": 136, + "n_pred": 165, + "n_ref": 165 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 6396, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9652855543113102, + "FN": 28, + "FP": 96, + "IoU": 0.9329004329004329, + "TN": 4552, + "TP": 1724, + "n_pred": 1820, + "n_ref": 1752 + }, + "2": { + "Dice": 0.9020306376914856, + "FN": 194, + "FP": 81, + "IoU": 0.8215444516547696, + "TN": 4859, + "TP": 1266, + "n_pred": 1347, + "n_ref": 1460 + }, + "3": { + "Dice": 0.970384159756304, + "FN": 45, + "FP": 130, + "IoU": 0.9424720578566732, + "TN": 3358, + "TP": 2867, + "n_pred": 2997, + "n_ref": 2912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.6706761410301368, + "FN": 104.5151515151515, + "FP": 44.24242424242425, + "IoU": 0.5815897002684213, + "TN": 7013.939393939395, + "TP": 400.93939393939394, + "n_pred": 445.1818181818182, + "n_ref": 505.4545454545455 + }, + "mean": { + "1": { + "Dice": 0.8147172159214723, + "FN": 55.36363636363637, + "FP": 10.090909090909092, + "IoU": 0.7063184807570271, + "TN": 7239.909090909091, + "TP": 258.27272727272725, + "n_pred": 268.3636363636364, + "n_ref": 313.6363636363636 + }, + "2": { + "Dice": 0.48680395166413276, + "FN": 110.54545454545455, + "FP": 102.18181818181819, + "IoU": 0.41007844565039503, + "TN": 7013.909090909091, + "TP": 337.0, + "n_pred": 439.1818181818182, + "n_ref": 447.54545454545456 + }, + "3": { + "Dice": 0.7105072555048054, + "FN": 147.63636363636363, + "FP": 20.454545454545453, + "IoU": 0.628372174397842, + "TN": 6788.0, + "TP": 607.5454545454545, + "n_pred": 628.0, + "n_ref": 755.1818181818181 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.667964946445959, + "FN": 592, + "FP": 90, + "IoU": 0.5014619883040936, + "TN": 5032, + "TP": 686, + "n_pred": 776, + "n_ref": 1278 + }, + "3": { + "Dice": 0.7399946991783727, + "FN": 946, + "FP": 35, + "IoU": 0.5872949095498528, + "TN": 4023, + "TP": 1396, + "n_pred": 1431, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 15, + "IoU": 0.0, + "TN": 6385, + "TP": 0, + "n_pred": 15, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 22, + "IoU": 0.0, + "TN": 6378, + "TP": 0, + "n_pred": 22, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 6396, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.582787243337702, + "FN": 359, + "FP": 596, + "IoU": 0.41122071516646114, + "TN": 4778, + "TP": 667, + "n_pred": 1263, + "n_ref": 1026 + }, + "3": { + "Dice": 0.9243953006219765, + "FN": 392, + "FP": 155, + "IoU": 0.8594191724492418, + "TN": 2509, + "TP": 3344, + "n_pred": 3499, + "n_ref": 3736 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9083969465648855, + "FN": 339, + "FP": 21, + "IoU": 0.8321678321678322, + "TN": 4255, + "TP": 1785, + "n_pred": 1806, + "n_ref": 2124 + }, + "2": { + "Dice": 0.8982035928143712, + "FN": 26, + "FP": 59, + "IoU": 0.8152173913043478, + "TN": 5940, + "TP": 375, + "n_pred": 434, + "n_ref": 401 + }, + "3": { + "Dice": 0.7398843930635838, + "FN": 45, + "FP": 0, + "IoU": 0.5871559633027523, + "TN": 6291, + "TP": 64, + "n_pred": 64, + "n_ref": 109 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9044081228330857, + "FN": 111, + "FP": 82, + "IoU": 0.825497287522604, + "TN": 11694, + "TP": 913, + "n_pred": 995, + "n_ref": 1024 + }, + "2": { + "Dice": 0.911986588432523, + "FN": 80, + "FP": 130, + "IoU": 0.8382126348228043, + "TN": 11502, + "TP": 1088, + "n_pred": 1218, + "n_ref": 1168 + }, + "3": { + "Dice": 0.9216666666666666, + "FN": 63, + "FP": 31, + "IoU": 0.8547140649149922, + "TN": 12153, + "TP": 553, + "n_pred": 584, + "n_ref": 616 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6313465783664459, + "FN": 159, + "FP": 8, + "IoU": 0.4612903225806452, + "TN": 6090, + "TP": 143, + "n_pred": 151, + "n_ref": 302 + }, + "2": { + "Dice": 0.833489242282507, + "FN": 159, + "FP": 197, + "IoU": 0.714514835605453, + "TN": 5153, + "TP": 891, + "n_pred": 1088, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9371024734982332, + "FN": 178, + "FP": 0, + "IoU": 0.8816489361702128, + "TN": 4896, + "TP": 1326, + "n_pred": 1326, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 15, + "IoU": 0.0, + "TN": 6385, + "TP": 0, + "n_pred": 15, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.5481472810620326, + "FN": 50.363636363636374, + "FP": 59.63636363636363, + "IoU": 0.4679156235624658, + "TN": 5957.212121212121, + "TP": 332.7878787878788, + "n_pred": 392.42424242424244, + "n_ref": 383.1515151515152 + }, + "mean": { + "1": { + "Dice": 0.2302249022941391, + "FN": 16.545454545454547, + "FP": 89.45454545454545, + "IoU": 0.15542056763260076, + "TN": 6274.909090909091, + "TP": 19.09090909090909, + "n_pred": 108.54545454545455, + "n_ref": 35.63636363636363 + }, + "2": { + "Dice": 0.8053713413161306, + "FN": 125.18181818181819, + "FP": 39.27272727272727, + "IoU": 0.6809606638424417, + "TN": 5857.090909090909, + "TP": 378.45454545454544, + "n_pred": 417.72727272727275, + "n_ref": 503.6363636363636 + }, + "3": { + "Dice": 0.6088455995758283, + "FN": 9.363636363636363, + "FP": 50.18181818181818, + "IoU": 0.5673656392123549, + "TN": 5739.636363636364, + "TP": 600.8181818181819, + "n_pred": 651.0, + "n_ref": 610.1818181818181 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.26666666666666666, + "FN": 0, + "FP": 11, + "IoU": 0.15384615384615385, + "TN": 6387, + "TP": 2, + "n_pred": 13, + "n_ref": 2 + }, + "2": { + "Dice": 0.8873456790123457, + "FN": 148, + "FP": 144, + "IoU": 0.79750346740638, + "TN": 4958, + "TP": 1150, + "n_pred": 1294, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9757548713372006, + "FN": 26, + "FP": 137, + "IoU": 0.9526575660760964, + "TN": 2957, + "TP": 3280, + "n_pred": 3417, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 316, + "IoU": 0.0, + "TN": 6084, + "TP": 0, + "n_pred": 316, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 38, + "IoU": 0.0, + "TN": 6362, + "TP": 0, + "n_pred": 38, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 209, + "IoU": 0.0, + "TN": 6191, + "TP": 0, + "n_pred": 209, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 96, + "IoU": 0.0, + "TN": 6304, + "TP": 0, + "n_pred": 96, + "n_ref": 0 + }, + "2": { + "Dice": 0.8603718556325192, + "FN": 334, + "FP": 49, + "IoU": 0.7549584133077415, + "TN": 4837, + "TP": 1180, + "n_pred": 1229, + "n_ref": 1514 + }, + "3": { + "Dice": 0.9426038264115726, + "FN": 22, + "FP": 101, + "IoU": 0.8914386584289496, + "TN": 5267, + "TP": 1010, + "n_pred": 1111, + "n_ref": 1032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6923076923076923, + "FN": 28, + "FP": 4, + "IoU": 0.5294117647058824, + "TN": 6332, + "TP": 36, + "n_pred": 40, + "n_ref": 64 + }, + "2": { + "Dice": 0.8482632541133455, + "FN": 144, + "FP": 188, + "IoU": 0.7365079365079366, + "TN": 5140, + "TP": 928, + "n_pred": 1116, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9687574528976867, + "FN": 23, + "FP": 108, + "IoU": 0.9394079555966698, + "TN": 4238, + "TP": 2031, + "n_pred": 2139, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4574780058651026, + "FN": 40, + "FP": 330, + "IoU": 0.2965779467680608, + "TN": 5874, + "TP": 156, + "n_pred": 486, + "n_ref": 196 + }, + "2": { + "Dice": 0.6834532374100719, + "FN": 696, + "FP": 8, + "IoU": 0.5191256830601093, + "TN": 4936, + "TP": 760, + "n_pred": 768, + "n_ref": 1456 + }, + "3": { + "Dice": 0.7659574468085106, + "FN": 8, + "FP": 168, + "IoU": 0.6206896551724138, + "TN": 5936, + "TP": 288, + "n_pred": 456, + "n_ref": 296 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1951219512195122, + "FN": 114, + "FP": 18, + "IoU": 0.10810810810810811, + "TN": 6252, + "TP": 16, + "n_pred": 34, + "n_ref": 130 + }, + "2": { + "Dice": 0.7474226804123711, + "FN": 55, + "FP": 43, + "IoU": 0.5967078189300411, + "TN": 6157, + "TP": 145, + "n_pred": 188, + "n_ref": 200 + }, + "3": { + "Dice": 0.0, + "FN": 24, + "FP": 0, + "IoU": 0.0, + "TN": 6376, + "TP": 0, + "n_pred": 0, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3239657/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.595514293053929, + "FN": 123.53333333333333, + "FP": 54.92727272727274, + "IoU": 0.5174815632038814, + "TN": 6460.49696969697, + "TP": 342.8606060606061, + "n_pred": 397.7878787878788, + "n_ref": 466.3939393939394 + }, + "mean": { + "1": { + "Dice": 0.4702070328515474, + "FN": 149.39999999999998, + "FP": 90.18181818181817, + "IoU": 0.39505946831032135, + "TN": 6482.145454545455, + "TP": 260.0909090909091, + "n_pred": 350.2727272727273, + "n_ref": 409.49090909090916 + }, + "2": { + "Dice": 0.6852221280834772, + "FN": 103.3090909090909, + "FP": 50.74545454545455, + "IoU": 0.5853842309899453, + "TN": 6522.945454545455, + "TP": 304.8181818181818, + "n_pred": 355.5636363636364, + "n_ref": 408.1272727272727 + }, + "3": { + "Dice": 0.6311137182267624, + "FN": 117.89090909090908, + "FP": 23.854545454545455, + "IoU": 0.5720009903113779, + "TN": 6376.4, + "TP": 463.6727272727273, + "n_pred": 487.5272727272727, + "n_ref": 581.5636363636363 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_002/summary.json b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_002/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..b94c4f321517b02a330a718b516d5d5bfbc906dd --- /dev/null +++ b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_002/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.810403350096319, + "FN": 1930.42, + "FP": 1194.4799999999998, + "IoU": 0.6998863070563263, + "TN": 843040.0466666667, + "TP": 8263.693333333335, + "n_pred": 9458.173333333332, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.7355878698813169, + "FN": 3080.66, + "FP": 1127.36, + "IoU": 0.5975954945809339, + "TN": 843447.22, + "TP": 6773.4, + "n_pred": 7900.76, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8054959110103002, + "FN": 1951.42, + "FP": 1467.58, + "IoU": 0.6861029611790979, + "TN": 842905.56, + "TP": 8104.08, + "n_pred": 9571.66, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.8901262693973401, + "FN": 759.18, + "FP": 988.5, + "IoU": 0.8159604654089471, + "TN": 842767.36, + "TP": 9913.6, + "n_pred": 10902.1, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.825969421670729, + "FN": 2127, + "FP": 1800, + "IoU": 0.7035331420806281, + "TN": 1092674, + "TP": 9319, + "n_pred": 11119, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8543432562555096, + "FN": 857, + "FP": 3439, + "IoU": 0.7457235868600177, + "TN": 1089025, + "TP": 12599, + "n_pred": 16038, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9401908121542532, + "FN": 754, + "FP": 2230, + "IoU": 0.8871321582570543, + "TN": 1079482, + "TP": 23454, + "n_pred": 25684, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8817879571481345, + "FN": 104, + "FP": 1176, + "IoU": 0.7885695407994714, + "TN": 1099866, + "TP": 4774, + "n_pred": 5950, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8731383569908863, + "FN": 2232, + "FP": 1763, + "IoU": 0.7748407822803359, + "TN": 1088177, + "TP": 13748, + "n_pred": 15511, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9130547222509569, + "FN": 829, + "FP": 2533, + "IoU": 0.8400190340233167, + "TN": 1084905, + "TP": 17653, + "n_pred": 20186, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7512540967159387, + "FN": 3254, + "FP": 465, + "IoU": 0.601606855918586, + "TN": 900105, + "TP": 5616, + "n_pred": 6081, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8822111763819852, + "FN": 2072, + "FP": 1056, + "IoU": 0.789246732246328, + "TN": 894598, + "TP": 11714, + "n_pred": 12770, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9700197332445734, + "FN": 1012, + "FP": 249, + "IoU": 0.9417847744794793, + "TN": 887779, + "TP": 20400, + "n_pred": 20649, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.696882898062342, + "FN": 2842, + "FP": 756, + "IoU": 0.534781484354797, + "TN": 901706, + "TP": 4136, + "n_pred": 4892, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8587482219061167, + "FN": 2250, + "FP": 1722, + "IoU": 0.7524616726910134, + "TN": 893394, + "TP": 12074, + "n_pred": 13796, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9578985048324477, + "FN": 1240, + "FP": 289, + "IoU": 0.9191988585319453, + "TN": 890517, + "TP": 17394, + "n_pred": 17683, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8591759960114218, + "FN": 5222, + "FP": 992, + "IoU": 0.753118792212952, + "TN": 1400590, + "TP": 18956, + "n_pred": 19948, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8555112881806108, + "FN": 2200, + "FP": 2152, + "IoU": 0.7475052216291483, + "TN": 1408524, + "TP": 12884, + "n_pred": 15036, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9691429024709475, + "FN": 841, + "FP": 715, + "IoU": 0.9401331230041168, + "TN": 1399769, + "TP": 24435, + "n_pred": 25150, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8607105779213289, + "FN": 2627, + "FP": 2203, + "IoU": 0.7554801802257884, + "TN": 1406007, + "TP": 14923, + "n_pred": 17126, + "n_ref": 17550 + }, + "2": { + "Dice": 0.852768815434253, + "FN": 2117, + "FP": 2355, + "IoU": 0.743327785111634, + "TN": 1408337, + "TP": 12951, + "n_pred": 15306, + "n_ref": 15068 + }, + "3": { + "Dice": 0.96178244708082, + "FN": 1095, + "FP": 622, + "IoU": 0.9263785267129748, + "TN": 1402438, + "TP": 21605, + "n_pred": 22227, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7966337636041508, + "FN": 2963, + "FP": 251, + "IoU": 0.6620044168682301, + "TN": 752539, + "TP": 6295, + "n_pred": 6546, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8668996188055909, + "FN": 1223, + "FP": 1291, + "IoU": 0.7650686851696104, + "TN": 751347, + "TP": 8187, + "n_pred": 9478, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9719767735420348, + "FN": 616, + "FP": 272, + "IoU": 0.9454813359528488, + "TN": 745760, + "TP": 15400, + "n_pred": 15672, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7355158302821452, + "FN": 1503, + "FP": 953, + "IoU": 0.5816726281723726, + "TN": 756177, + "TP": 3415, + "n_pred": 4368, + "n_ref": 4918 + }, + "2": { + "Dice": 0.7997908546439776, + "FN": 2825, + "FP": 1387, + "IoU": 0.6663762376237624, + "TN": 749423, + "TP": 8413, + "n_pred": 9800, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9404924459322557, + "FN": 1236, + "FP": 115, + "IoU": 0.8876694104930573, + "TN": 750021, + "TP": 10676, + "n_pred": 10791, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6114411981340535, + "FN": 7618, + "FP": 295, + "IoU": 0.44034231558101705, + "TN": 1064133, + "TP": 6226, + "n_pred": 6521, + "n_ref": 13844 + }, + "2": { + "Dice": 0.6930946291560103, + "FN": 2553, + "FP": 3927, + "IoU": 0.5303326810176126, + "TN": 1064475, + "TP": 7317, + "n_pred": 11244, + "n_ref": 9870 + }, + "3": { + "Dice": 0.8324233008537211, + "FN": 4607, + "FP": 948, + "IoU": 0.7129495659363373, + "TN": 1058920, + "TP": 13797, + "n_pred": 14745, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6265771265771266, + "FN": 7138, + "FP": 202, + "IoU": 0.4562157356645429, + "TN": 1064774, + "TP": 6158, + "n_pred": 6360, + "n_ref": 13296 + }, + "2": { + "Dice": 0.7073611948606151, + "FN": 3175, + "FP": 3134, + "IoU": 0.5472226209272284, + "TN": 1064338, + "TP": 7625, + "n_pred": 10759, + "n_ref": 10800 + }, + "3": { + "Dice": 0.8272145259883532, + "FN": 3791, + "FP": 986, + "IoU": 0.7053417221811005, + "TN": 1062060, + "TP": 11435, + "n_pred": 12421, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7060953530476766, + "FN": 3867, + "FP": 516, + "IoU": 0.5457089552238806, + "TN": 1096272, + "TP": 5265, + "n_pred": 5781, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8044848741273535, + "FN": 1975, + "FP": 2646, + "IoU": 0.6729190260475651, + "TN": 1091792, + "TP": 9507, + "n_pred": 12153, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8828614008941877, + "FN": 1129, + "FP": 1622, + "IoU": 0.7902881536819637, + "TN": 1092802, + "TP": 10367, + "n_pred": 11989, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.44629548443665057, + "FN": 2034, + "FP": 492, + "IoU": 0.28724604966139955, + "TN": 1102376, + "TP": 1018, + "n_pred": 1510, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8109007697108384, + "FN": 2607, + "FP": 1938, + "IoU": 0.6819454163750874, + "TN": 1091630, + "TP": 9745, + "n_pred": 11683, + "n_ref": 12352 + }, + "3": { + "Dice": 0.6759749638902263, + "FN": 472, + "FP": 2220, + "IoU": 0.5105454545454545, + "TN": 1100420, + "TP": 2808, + "n_pred": 5028, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.890151941474395, + "FN": 1255, + "FP": 697, + "IoU": 0.8020484737856202, + "TN": 1137019, + "TP": 7909, + "n_pred": 8606, + "n_ref": 9164 + }, + "2": { + "Dice": 0.89439408840807, + "FN": 2592, + "FP": 1381, + "IoU": 0.8089628311775737, + "TN": 1126083, + "TP": 16824, + "n_pred": 18205, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9423884013735215, + "FN": 815, + "FP": 544, + "IoU": 0.8910533910533911, + "TN": 1134406, + "TP": 11115, + "n_pred": 11659, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5105976704219973, + "FN": 1129, + "FP": 1434, + "IoU": 0.34282051282051285, + "TN": 1142980, + "TP": 1337, + "n_pred": 2771, + "n_ref": 2466 + }, + "2": { + "Dice": 0.7934919220310322, + "FN": 7074, + "FP": 1963, + "IoU": 0.6576764271373916, + "TN": 1120481, + "TP": 17362, + "n_pred": 19325, + "n_ref": 24436 + }, + "3": { + "Dice": 0.49793233082706767, + "FN": 67, + "FP": 5275, + "IoU": 0.3314979351770742, + "TN": 1138889, + "TP": 2649, + "n_pred": 7924, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8989433757789217, + "FN": 1892, + "FP": 346, + "IoU": 0.8164370078740157, + "TN": 788608, + "TP": 9954, + "n_pred": 10300, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8505760502734784, + "FN": 1325, + "FP": 1243, + "IoU": 0.740002024906348, + "TN": 790923, + "TP": 7309, + "n_pred": 8552, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9439800818068647, + "FN": 691, + "FP": 254, + "IoU": 0.8939036712697878, + "TN": 791893, + "TP": 7962, + "n_pred": 8216, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6123713218547873, + "FN": 578, + "FP": 3677, + "IoU": 0.4413077731092437, + "TN": 793184, + "TP": 3361, + "n_pred": 7038, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8514404720583131, + "FN": 2840, + "FP": 584, + "IoU": 0.7413115744938048, + "TN": 787564, + "TP": 9812, + "n_pred": 10396, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8086696562032885, + "FN": 141, + "FP": 1139, + "IoU": 0.6787954830614805, + "TN": 796815, + "TP": 2705, + "n_pred": 3844, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9219636363636363, + "FN": 1515, + "FP": 631, + "IoU": 0.8552249881940228, + "TN": 1333017, + "TP": 12677, + "n_pred": 13308, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8775850876379486, + "FN": 1143, + "FP": 1497, + "IoU": 0.7818722630752706, + "TN": 1335737, + "TP": 9463, + "n_pred": 10960, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9694698620188816, + "FN": 641, + "FP": 410, + "IoU": 0.940748675160672, + "TN": 1330102, + "TP": 16687, + "n_pred": 17097, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7015803742643655, + "FN": 563, + "FP": 3950, + "IoU": 0.5403340802607456, + "TN": 1338022, + "TP": 5305, + "n_pred": 9255, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8565684219532018, + "FN": 2102, + "FP": 1251, + "IoU": 0.749120838009727, + "TN": 1334475, + "TP": 10012, + "n_pred": 11263, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9448954914493004, + "FN": 678, + "FP": 598, + "IoU": 0.8955468238375901, + "TN": 1335624, + "TP": 10940, + "n_pred": 11538, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8500065157899309, + "FN": 2678, + "FP": 775, + "IoU": 0.7391402885850268, + "TN": 838731, + "TP": 9784, + "n_pred": 10559, + "n_ref": 12462 + }, + "2": { + "Dice": 0.7998576584820294, + "FN": 1581, + "FP": 2356, + "IoU": 0.6664689935615046, + "TN": 840164, + "TP": 7867, + "n_pred": 10223, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9592101003561023, + "FN": 710, + "FP": 802, + "IoU": 0.9216174183514775, + "TN": 832678, + "TP": 17778, + "n_pred": 18580, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8630217519106408, + "FN": 1066, + "FP": 798, + "IoU": 0.7590486039296794, + "TN": 844232, + "TP": 5872, + "n_pred": 6670, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8129068253673052, + "FN": 2550, + "FP": 1474, + "IoU": 0.6847877173742755, + "TN": 839202, + "TP": 8742, + "n_pred": 10216, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9310925656534722, + "FN": 835, + "FP": 965, + "IoU": 0.8710694076355562, + "TN": 838007, + "TP": 12161, + "n_pred": 13126, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6159183673469387, + "FN": 2838, + "FP": 926, + "IoU": 0.4450014744913005, + "TN": 845186, + "TP": 3018, + "n_pred": 3944, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8249676398676831, + "FN": 2116, + "FP": 1535, + "IoU": 0.7020807833537331, + "TN": 839713, + "TP": 8604, + "n_pred": 10139, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9022322927156764, + "FN": 2205, + "FP": 125, + "IoU": 0.8218790612338506, + "TN": 838887, + "TP": 10751, + "n_pred": 10876, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5811706762644441, + "FN": 570, + "FP": 1641, + "IoU": 0.40961281708945263, + "TN": 848223, + "TP": 1534, + "n_pred": 3175, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8460584285042132, + "FN": 2696, + "FP": 903, + "IoU": 0.7331900066721032, + "TN": 838479, + "TP": 9890, + "n_pred": 10793, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9214269060387037, + "FN": 842, + "FP": 506, + "IoU": 0.8543017725897103, + "TN": 842716, + "TP": 7904, + "n_pred": 8410, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5806484764400596, + "FN": 7438, + "FP": 723, + "IoU": 0.409094200275143, + "TN": 783229, + "TP": 5650, + "n_pred": 6373, + "n_ref": 13088 + }, + "2": { + "Dice": 0.7715385486244764, + "FN": 2039, + "FP": 1997, + "IoU": 0.6280527140355727, + "TN": 786189, + "TP": 6815, + "n_pred": 8812, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9382063929778227, + "FN": 1380, + "FP": 211, + "IoU": 0.8836052381300753, + "TN": 783371, + "TP": 12078, + "n_pred": 12289, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5225163871626798, + "FN": 4599, + "FP": 1010, + "IoU": 0.35365291541829913, + "TN": 788362, + "TP": 3069, + "n_pred": 4079, + "n_ref": 7668 + }, + "2": { + "Dice": 0.7703137124487307, + "FN": 2673, + "FP": 1471, + "IoU": 0.6264310826647436, + "TN": 785947, + "TP": 6949, + "n_pred": 8420, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9344489324870168, + "FN": 935, + "FP": 201, + "IoU": 0.8769630672587458, + "TN": 787807, + "TP": 8097, + "n_pred": 8298, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8382392412990963, + "FN": 3099, + "FP": 517, + "IoU": 0.7215248363496342, + "TN": 883685, + "TP": 9369, + "n_pred": 9886, + "n_ref": 12468 + }, + "2": { + "Dice": 0.7579701030429103, + "FN": 2504, + "FP": 2499, + "IoU": 0.6102671963854484, + "TN": 883833, + "TP": 7834, + "n_pred": 10333, + "n_ref": 10338 + }, + "3": { + "Dice": 0.8970405278039585, + "FN": 355, + "FP": 2376, + "IoU": 0.8133032540333607, + "TN": 882042, + "TP": 11897, + "n_pred": 14273, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7046691027202598, + "FN": 2017, + "FP": 1620, + "IoU": 0.5440070210631895, + "TN": 888694, + "TP": 4339, + "n_pred": 5959, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8239493173909164, + "FN": 2284, + "FP": 1662, + "IoU": 0.7006069802731412, + "TN": 883490, + "TP": 9234, + "n_pred": 10896, + "n_ref": 11518 + }, + "3": { + "Dice": 0.8778033955145672, + "FN": 450, + "FP": 1882, + "IoU": 0.7822189017556966, + "TN": 885962, + "TP": 8376, + "n_pred": 10258, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9332712889716147, + "FN": 1192, + "FP": 242, + "IoU": 0.8748909439888327, + "TN": 750586, + "TP": 10028, + "n_pred": 10270, + "n_ref": 11220 + }, + "2": { + "Dice": 0.8892950649607272, + "FN": 1411, + "FP": 830, + "IoU": 0.8006582458637254, + "TN": 750806, + "TP": 9001, + "n_pred": 9831, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9642380793597866, + "FN": 185, + "FP": 673, + "IoU": 0.9309456740442656, + "TN": 749623, + "TP": 11567, + "n_pred": 12240, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.753402636373379, + "FN": 277, + "FP": 2024, + "IoU": 0.6043672627235214, + "TN": 756232, + "TP": 3515, + "n_pred": 5539, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8540389469888208, + "FN": 2159, + "FP": 1079, + "IoU": 0.7452600110140823, + "TN": 749337, + "TP": 9473, + "n_pred": 10552, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9206930553599099, + "FN": 298, + "FP": 828, + "IoU": 0.8530409814669799, + "TN": 754386, + "TP": 6536, + "n_pred": 7364, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8024563882397696, + "FN": 559, + "FP": 3076, + "IoU": 0.6700853149391904, + "TN": 984310, + "TP": 7383, + "n_pred": 10459, + "n_ref": 7942 + }, + "2": { + "Dice": 0.7819402338674751, + "FN": 1526, + "FP": 2502, + "IoU": 0.6419555555555555, + "TN": 984078, + "TP": 7222, + "n_pred": 9724, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9575919421787467, + "FN": 51, + "FP": 1410, + "IoU": 0.9186344397415905, + "TN": 977372, + "TP": 16495, + "n_pred": 17905, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5457111178308638, + "FN": 535, + "FP": 3972, + "IoU": 0.3752425838647075, + "TN": 988114, + "TP": 2707, + "n_pred": 6679, + "n_ref": 3242 + }, + "2": { + "Dice": 0.7736223641143961, + "FN": 1125, + "FP": 3094, + "IoU": 0.6308190409520475, + "TN": 983900, + "TP": 7209, + "n_pred": 10303, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9003439380911435, + "FN": 143, + "FP": 2175, + "IoU": 0.8187504887012276, + "TN": 982539, + "TP": 10471, + "n_pred": 12646, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9358570696346196, + "FN": 1543, + "FP": 209, + "IoU": 0.8794467763022088, + "TN": 743483, + "TP": 12781, + "n_pred": 12990, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8868550509095069, + "FN": 1060, + "FP": 918, + "IoU": 0.7967112024665981, + "TN": 748286, + "TP": 7752, + "n_pred": 8670, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9656399132321041, + "FN": 173, + "FP": 619, + "IoU": 0.9335626205855213, + "TN": 746095, + "TP": 11129, + "n_pred": 11748, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6634060880356231, + "FN": 692, + "FP": 3919, + "IoU": 0.4963407973784817, + "TN": 748861, + "TP": 4544, + "n_pred": 8463, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8823560910307898, + "FN": 1093, + "FP": 1104, + "IoU": 0.7894787274817938, + "TN": 747580, + "TP": 8239, + "n_pred": 9343, + "n_ref": 9332 + }, + "3": { + "Dice": 0.7912154640218602, + "FN": 283, + "FP": 1780, + "IoU": 0.654554588077696, + "TN": 752044, + "TP": 3909, + "n_pred": 5689, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8748817727334144, + "FN": 1471, + "FP": 381, + "IoU": 0.7775909691365438, + "TN": 630649, + "TP": 6475, + "n_pred": 6856, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8909009412819363, + "FN": 397, + "FP": 820, + "IoU": 0.8032654380860006, + "TN": 632790, + "TP": 4969, + "n_pred": 5789, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9612695749440716, + "FN": 459, + "FP": 95, + "IoU": 0.9254273791896621, + "TN": 631547, + "TP": 6875, + "n_pred": 6970, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.683162483798751, + "FN": 121, + "FP": 2568, + "IoU": 0.518790264853257, + "TN": 633388, + "TP": 2899, + "n_pred": 5467, + "n_ref": 3020 + }, + "2": { + "Dice": 0.8801130342635112, + "FN": 1123, + "FP": 574, + "IoU": 0.7858945243502398, + "TN": 631050, + "TP": 6229, + "n_pred": 6803, + "n_ref": 7352 + }, + "3": { + "Dice": 0.884114363051937, + "FN": 143, + "FP": 542, + "IoU": 0.7922983626440266, + "TN": 635678, + "TP": 2613, + "n_pred": 3155, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.833295938972403, + "FN": 4298, + "FP": 160, + "IoU": 0.7142307692307692, + "TN": 967440, + "TP": 11142, + "n_pred": 11302, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8491342957781416, + "FN": 1338, + "FP": 1703, + "IoU": 0.7378222260539702, + "TN": 971441, + "TP": 8558, + "n_pred": 10261, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9656440815125432, + "FN": 92, + "FP": 842, + "IoU": 0.933570412517781, + "TN": 968980, + "TP": 13126, + "n_pred": 13968, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9118438761776582, + "FN": 768, + "FP": 280, + "IoU": 0.8379715522572665, + "TN": 976572, + "TP": 5420, + "n_pred": 5700, + "n_ref": 6188 + }, + "2": { + "Dice": 0.8810544703827219, + "FN": 1634, + "FP": 613, + "IoU": 0.7873971047402781, + "TN": 972471, + "TP": 8322, + "n_pred": 8935, + "n_ref": 9956 + }, + "3": { + "Dice": 0.8207625939326468, + "FN": 92, + "FP": 2484, + "IoU": 0.6960113287703564, + "TN": 974566, + "TP": 5898, + "n_pred": 8382, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7377086668191173, + "FN": 6502, + "FP": 380, + "IoU": 0.5844202898550724, + "TN": 1032016, + "TP": 9678, + "n_pred": 10058, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8448188139521736, + "FN": 1236, + "FP": 1509, + "IoU": 0.7313301360477635, + "TN": 1038359, + "TP": 7472, + "n_pred": 8981, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9600575171752677, + "FN": 242, + "FP": 758, + "IoU": 0.923183284682747, + "TN": 1035558, + "TP": 12018, + "n_pred": 12776, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8769848512502282, + "FN": 625, + "FP": 723, + "IoU": 0.7809198764830164, + "TN": 1042423, + "TP": 4805, + "n_pred": 5528, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8342561830933924, + "FN": 2412, + "FP": 731, + "IoU": 0.7156428119062698, + "TN": 1037523, + "TP": 7910, + "n_pred": 8641, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9190669562753802, + "FN": 214, + "FP": 643, + "IoU": 0.8502533636204788, + "TN": 1042853, + "TP": 4866, + "n_pred": 5509, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6804979253112033, + "FN": 5176, + "FP": 445, + "IoU": 0.5157232704402516, + "TN": 477609, + "TP": 5986, + "n_pred": 6431, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7598431907277996, + "FN": 488, + "FP": 921, + "IoU": 0.6126992853216052, + "TN": 485578, + "TP": 2229, + "n_pred": 3150, + "n_ref": 2717 + }, + "3": { + "Dice": 0.9535103368664078, + "FN": 108, + "FP": 335, + "IoU": 0.9111512234255916, + "TN": 484230, + "TP": 4543, + "n_pred": 4878, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7398706162751106, + "FN": 2305, + "FP": 751, + "IoU": 0.587138611186166, + "TN": 481814, + "TP": 4346, + "n_pred": 5097, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8446875, + "FN": 657, + "FP": 337, + "IoU": 0.7311333513659725, + "TN": 485519, + "TP": 2703, + "n_pred": 3040, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8709276299428003, + "FN": 39, + "FP": 480, + "IoU": 0.7713656387665199, + "TN": 486946, + "TP": 1751, + "n_pred": 2231, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6940717248109295, + "FN": 7341, + "FP": 183, + "IoU": 0.5314776760694937, + "TN": 464421, + "TP": 8535, + "n_pred": 8718, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8060094308586467, + "FN": 844, + "FP": 925, + "IoU": 0.6750551065393093, + "TN": 475036, + "TP": 3675, + "n_pred": 4600, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9471480144404332, + "FN": 401, + "FP": 331, + "IoU": 0.8996022493485119, + "TN": 473189, + "TP": 6559, + "n_pred": 6890, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7748105565717271, + "FN": 4198, + "FP": 111, + "IoU": 0.6324006142296537, + "TN": 468758, + "TP": 7413, + "n_pred": 7524, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8033142631682778, + "FN": 1590, + "FP": 404, + "IoU": 0.6712825585229146, + "TN": 474414, + "TP": 4072, + "n_pred": 4476, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8840269781214015, + "FN": 119, + "FP": 586, + "IoU": 0.7921580188679245, + "TN": 477088, + "TP": 2687, + "n_pred": 3273, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6413612565445026, + "FN": 10872, + "FP": 88, + "IoU": 0.4720616570327553, + "TN": 623880, + "TP": 9800, + "n_pred": 9888, + "n_ref": 20672 + }, + "2": { + "Dice": 0.7610070123002644, + "FN": 2446, + "FP": 1712, + "IoU": 0.6142141399146409, + "TN": 633862, + "TP": 6620, + "n_pred": 8332, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9274736921795745, + "FN": 1747, + "FP": 169, + "IoU": 0.8647561233853321, + "TN": 630473, + "TP": 12251, + "n_pred": 12420, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6873617891267159, + "FN": 7095, + "FP": 398, + "IoU": 0.5236490781945328, + "TN": 628910, + "TP": 8237, + "n_pred": 8635, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8006722061432172, + "FN": 3590, + "FP": 680, + "IoU": 0.667600809590534, + "TN": 631794, + "TP": 8576, + "n_pred": 9256, + "n_ref": 12166 + }, + "3": { + "Dice": 0.892861855126006, + "FN": 795, + "FP": 829, + "IoU": 0.8064593016327017, + "TN": 636249, + "TP": 6767, + "n_pred": 7596, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7063226094727435, + "FN": 9406, + "FP": 1110, + "IoU": 0.5459804852776099, + "TN": 541318, + "TP": 12646, + "n_pred": 13756, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7874720357941835, + "FN": 773, + "FP": 1222, + "IoU": 0.6494464944649446, + "TN": 558789, + "TP": 3696, + "n_pred": 4918, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9469316985571862, + "FN": 251, + "FP": 606, + "IoU": 0.8992120428084206, + "TN": 555977, + "TP": 7646, + "n_pred": 8252, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6427337903605631, + "FN": 2291, + "FP": 4536, + "IoU": 0.47355027760641577, + "TN": 551512, + "TP": 6141, + "n_pred": 10677, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8395897435897436, + "FN": 770, + "FP": 794, + "IoU": 0.7235283719285841, + "TN": 558823, + "TP": 4093, + "n_pred": 4887, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8747989276139411, + "FN": 189, + "FP": 745, + "IoU": 0.7774600905408625, + "TN": 560283, + "TP": 3263, + "n_pred": 4008, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5169647172547124, + "FN": 4901, + "FP": 96, + "IoU": 0.3485855820623126, + "TN": 411209, + "TP": 2674, + "n_pred": 2770, + "n_ref": 7575 + }, + "2": { + "Dice": 0.17537195314973092, + "FN": 2579, + "FP": 26, + "IoU": 0.09611380985426787, + "TN": 415998, + "TP": 277, + "n_pred": 303, + "n_ref": 2856 + }, + "3": { + "Dice": 0.4256619144602851, + "FN": 2945, + "FP": 439, + "IoU": 0.2703751617076326, + "TN": 414242, + "TP": 1254, + "n_pred": 1693, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5886696371737746, + "FN": 2425, + "FP": 806, + "IoU": 0.4171026519935053, + "TN": 413337, + "TP": 2312, + "n_pred": 3118, + "n_ref": 4737 + }, + "2": { + "Dice": 0.4245614035087719, + "FN": 2146, + "FP": 150, + "IoU": 0.26948775055679286, + "TN": 415737, + "TP": 847, + "n_pred": 997, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8038558256496228, + "FN": 465, + "FP": 471, + "IoU": 0.6720392431674842, + "TN": 416026, + "TP": 1918, + "n_pred": 2389, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8652131625871292, + "FN": 2891, + "FP": 435, + "IoU": 0.7624455396043139, + "TN": 482509, + "TP": 10675, + "n_pred": 11110, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8338910453754518, + "FN": 1442, + "FP": 1040, + "IoU": 0.7151056014692379, + "TN": 487798, + "TP": 6230, + "n_pred": 7270, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9299347668518966, + "FN": 74, + "FP": 1086, + "IoU": 0.8690449311356966, + "TN": 487652, + "TP": 7698, + "n_pred": 8784, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7993949870354364, + "FN": 4013, + "FP": 629, + "IoU": 0.6658267943272622, + "TN": 482619, + "TP": 9249, + "n_pred": 9878, + "n_ref": 13262 + }, + "2": { + "Dice": 0.7991189427312775, + "FN": 2127, + "FP": 1065, + "IoU": 0.6654438738077769, + "TN": 486969, + "TP": 6349, + "n_pred": 7414, + "n_ref": 8476 + }, + "3": { + "Dice": 0.7267148805610344, + "FN": 84, + "FP": 2410, + "IoU": 0.5707401032702237, + "TN": 490700, + "TP": 3316, + "n_pred": 5726, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_002/summary_cross_val.json b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_002/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..0264a6edfbdd830b07ffd6d44e9133630433f74a --- /dev/null +++ b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_002/summary_cross_val.json @@ -0,0 +1,2832 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.7233356526789455, + "FN": 114.40476190476191, + "FP": 66.35714285714286, + "IoU": 0.6445730807649261, + "TN": 7370.785714285714, + "TP": 677.0238095238095, + "n_pred": 743.3809523809523, + "n_ref": 791.4285714285714 + }, + "mean": { + "1": { + "Dice": 0.5789617760233645, + "FN": 143.14285714285714, + "FP": 74.07142857142857, + "IoU": 0.47825691964722605, + "TN": 7462.285714285715, + "TP": 549.0714285714286, + "n_pred": 623.1428571428571, + "n_ref": 692.2142857142857 + }, + "2": { + "Dice": 0.7444447919368538, + "FN": 142.42857142857142, + "FP": 95.64285714285714, + "IoU": 0.6468707544420338, + "TN": 7380.0, + "TP": 610.5, + "n_pred": 706.1428571428571, + "n_ref": 752.9285714285714 + }, + "3": { + "Dice": 0.8466003900766181, + "FN": 57.642857142857146, + "FP": 29.357142857142858, + "IoU": 0.8085915682055185, + "TN": 7270.071428571428, + "TP": 871.5, + "n_pred": 900.8571428571429, + "n_ref": 929.1428571428571 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9198813056379822, + "FN": 245, + "FP": 52, + "IoU": 0.8516483516483516, + "TN": 4398, + "TP": 1705, + "n_pred": 1757, + "n_ref": 1950 + }, + "2": { + "Dice": 0.8789115646258503, + "FN": 185, + "FP": 82, + "IoU": 0.7839805825242718, + "TN": 5164, + "TP": 969, + "n_pred": 1051, + "n_ref": 1154 + }, + "3": { + "Dice": 0.9601100412654745, + "FN": 75, + "FP": 12, + "IoU": 0.9232804232804233, + "TN": 5266, + "TP": 1047, + "n_pred": 1059, + "n_ref": 1122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7130434782608696, + "FN": 101, + "FP": 328, + "IoU": 0.5540540540540541, + "TN": 5438, + "TP": 533, + "n_pred": 861, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8248290373487638, + "FN": 126, + "FP": 207, + "IoU": 0.7018800358102059, + "TN": 11683, + "TP": 784, + "n_pred": 991, + "n_ref": 910 + }, + "3": { + "Dice": 0.9592781119851921, + "FN": 173, + "FP": 3, + "IoU": 0.9217429968875056, + "TN": 10551, + "TP": 2073, + "n_pred": 2076, + "n_ref": 2246 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6461538461538462, + "FN": 44, + "FP": 71, + "IoU": 0.4772727272727273, + "TN": 6180, + "TP": 105, + "n_pred": 176, + "n_ref": 149 + }, + "2": { + "Dice": 0.8907870652837095, + "FN": 81, + "FP": 98, + "IoU": 0.8030803080308031, + "TN": 5491, + "TP": 730, + "n_pred": 828, + "n_ref": 811 + }, + "3": { + "Dice": 0.9804347826086957, + "FN": 21, + "FP": 15, + "IoU": 0.9616204690831557, + "TN": 5462, + "TP": 902, + "n_pred": 917, + "n_ref": 923 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9396618582286335, + "FN": 19, + "FP": 370, + "IoU": 0.8861907548273844, + "TN": 2982, + "TP": 3029, + "n_pred": 3399, + "n_ref": 3048 + }, + "2": { + "Dice": 0.8728155339805825, + "FN": 257, + "FP": 5, + "IoU": 0.7743324720068906, + "TN": 5239, + "TP": 899, + "n_pred": 904, + "n_ref": 1156 + }, + "3": { + "Dice": 0.9508336896109448, + "FN": 0, + "FP": 115, + "IoU": 0.9062754686226568, + "TN": 5173, + "TP": 1112, + "n_pred": 1227, + "n_ref": 1112 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 84, + "IoU": 0.0, + "TN": 12716, + "TP": 0, + "n_pred": 84, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.873900293255132, + "FN": 16, + "FP": 27, + "IoU": 0.7760416666666666, + "TN": 6208, + "TP": 149, + "n_pred": 176, + "n_ref": 165 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8066568771414586, + "FN": 725, + "FP": 65, + "IoU": 0.6759639048400328, + "TN": 10362, + "TP": 1648, + "n_pred": 1713, + "n_ref": 2373 + }, + "2": { + "Dice": 0.9270790659565752, + "FN": 155, + "FP": 201, + "IoU": 0.8640702558228331, + "TN": 10181, + "TP": 2263, + "n_pred": 2464, + "n_ref": 2418 + }, + "3": { + "Dice": 0.927007299270073, + "FN": 142, + "FP": 18, + "IoU": 0.8639455782312925, + "TN": 11624, + "TP": 1016, + "n_pred": 1034, + "n_ref": 1158 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 153, + "IoU": 0.0, + "TN": 6247, + "TP": 0, + "n_pred": 153, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 28, + "IoU": 0.0, + "TN": 6372, + "TP": 0, + "n_pred": 28, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 18, + "IoU": 0.0, + "TN": 6382, + "TP": 0, + "n_pred": 18, + "n_ref": 0 + }, + "2": { + "Dice": 0.7945492662473794, + "FN": 568, + "FP": 216, + "IoU": 0.6591304347826087, + "TN": 4100, + "TP": 1516, + "n_pred": 1732, + "n_ref": 2084 + }, + "3": { + "Dice": 0.96060473906091, + "FN": 188, + "FP": 83, + "IoU": 0.9241958041958042, + "TN": 2825, + "TP": 3304, + "n_pred": 3387, + "n_ref": 3492 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4840989399293286, + "FN": 544, + "FP": 40, + "IoU": 0.31934731934731936, + "TN": 5542, + "TP": 274, + "n_pred": 314, + "n_ref": 818 + }, + "2": { + "Dice": 0.8584114454859398, + "FN": 137, + "FP": 150, + "IoU": 0.7519446845289542, + "TN": 5243, + "TP": 870, + "n_pred": 1020, + "n_ref": 1007 + }, + "3": { + "Dice": 0.9545454545454546, + "FN": 9, + "FP": 127, + "IoU": 0.9130434782608695, + "TN": 4836, + "TP": 1428, + "n_pred": 1555, + "n_ref": 1437 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7011596788581623, + "FN": 326, + "FP": 9, + "IoU": 0.5398351648351648, + "TN": 12072, + "TP": 393, + "n_pred": 402, + "n_ref": 719 + }, + "2": { + "Dice": 0.5231646471846044, + "FN": 469, + "FP": 200, + "IoU": 0.35424710424710426, + "TN": 11764, + "TP": 367, + "n_pred": 567, + "n_ref": 836 + }, + "3": { + "Dice": 0.926589392342817, + "FN": 199, + "FP": 10, + "IoU": 0.8632198952879581, + "TN": 11272, + "TP": 1319, + "n_pred": 1329, + "n_ref": 1518 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.7268088360974411, + "FN": 60.02380952380952, + "FP": 48.97619047619048, + "IoU": 0.6542391401219855, + "TN": 8100.761904761905, + "TP": 475.9523809523809, + "n_pred": 524.9285714285714, + "n_ref": 535.9761904761905 + }, + "mean": { + "1": { + "Dice": 0.4972989098907352, + "FN": 83.07142857142857, + "FP": 18.928571428571427, + "IoU": 0.4215768886278209, + "TN": 8284.92857142857, + "TP": 298.7857142857143, + "n_pred": 317.7142857142857, + "n_ref": 381.85714285714283 + }, + "2": { + "Dice": 0.7374340664571648, + "FN": 50.42857142857143, + "FP": 102.0, + "IoU": 0.6423950626208927, + "TN": 8145.928571428572, + "TP": 387.35714285714283, + "n_pred": 489.35714285714283, + "n_ref": 437.7857142857143 + }, + "3": { + "Dice": 0.9456935319444231, + "FN": 46.57142857142857, + "FP": 26.0, + "IoU": 0.8987454691172427, + "TN": 7871.428571428572, + "TP": 741.7142857142857, + "n_pred": 767.7142857142857, + "n_ref": 788.2857142857143 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6666666666666666, + "FN": 1, + "FP": 0, + "IoU": 0.5, + "TN": 6398, + "TP": 1, + "n_pred": 1, + "n_ref": 2 + }, + "2": { + "Dice": 0.8837744533947065, + "FN": 146, + "FP": 157, + "IoU": 0.7917525773195876, + "TN": 4945, + "TP": 1152, + "n_pred": 1309, + "n_ref": 1298 + }, + "3": { + "Dice": 0.9777645127592897, + "FN": 30, + "FP": 119, + "IoU": 0.9564963503649635, + "TN": 2975, + "TP": 3276, + "n_pred": 3395, + "n_ref": 3306 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 200, + "IoU": 0.0, + "TN": 25400, + "TP": 0, + "n_pred": 200, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 376, + "IoU": 0.0, + "TN": 25224, + "TP": 0, + "n_pred": 376, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 25600, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7, + "FN": 5, + "FP": 1, + "IoU": 0.5384615384615384, + "TN": 12787, + "TP": 7, + "n_pred": 8, + "n_ref": 12 + }, + "2": { + "Dice": 0.8746973365617433, + "FN": 69, + "FP": 345, + "IoU": 0.7772996234534696, + "TN": 10941, + "TP": 1445, + "n_pred": 1790, + "n_ref": 1514 + }, + "3": { + "Dice": 0.9496697790936005, + "FN": 207, + "FP": 14, + "IoU": 0.9041630529054641, + "TN": 10494, + "TP": 2085, + "n_pred": 2099, + "n_ref": 2292 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8678815489749431, + "FN": 226, + "FP": 6, + "IoU": 0.7665995975855131, + "TN": 5406, + "TP": 762, + "n_pred": 768, + "n_ref": 988 + }, + "2": { + "Dice": 0.8910973084886128, + "FN": 142, + "FP": 121, + "IoU": 0.8035847647498133, + "TN": 5061, + "TP": 1076, + "n_pred": 1197, + "n_ref": 1218 + }, + "3": { + "Dice": 0.9653194263363755, + "FN": 11, + "FP": 122, + "IoU": 0.9329637096774194, + "TN": 4416, + "TP": 1851, + "n_pred": 1973, + "n_ref": 1862 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 6398, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.8374070138150903, + "FN": 1, + "FP": 152, + "IoU": 0.720292504570384, + "TN": 5853, + "TP": 394, + "n_pred": 546, + "n_ref": 395 + }, + "3": { + "Dice": 0.9456681350954479, + "FN": 73, + "FP": 1, + "IoU": 0.8969359331476323, + "TN": 5682, + "TP": 644, + "n_pred": 645, + "n_ref": 717 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 606, + "FP": 0, + "IoU": 0.0, + "TN": 5794, + "TP": 0, + "n_pred": 0, + "n_ref": 606 + }, + "2": { + "Dice": 0.6729166666666667, + "FN": 219, + "FP": 95, + "IoU": 0.5070643642072213, + "TN": 5763, + "TP": 323, + "n_pred": 418, + "n_ref": 542 + }, + "3": { + "Dice": 0.8761538461538462, + "FN": 216, + "FP": 106, + "IoU": 0.7796030116358659, + "TN": 4939, + "TP": 1139, + "n_pred": 1245, + "n_ref": 1355 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7839388145315488, + "FN": 97, + "FP": 16, + "IoU": 0.6446540880503144, + "TN": 6082, + "TP": 205, + "n_pred": 221, + "n_ref": 302 + }, + "2": { + "Dice": 0.8689915174363808, + "FN": 128, + "FP": 150, + "IoU": 0.7683333333333333, + "TN": 5200, + "TP": 922, + "n_pred": 1072, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9595854922279793, + "FN": 115, + "FP": 2, + "IoU": 0.9223107569721115, + "TN": 4894, + "TP": 1389, + "n_pred": 1391, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.959904248952723, + "FN": 228, + "FP": 40, + "IoU": 0.9228998849252014, + "TN": 9324, + "TP": 3208, + "n_pred": 3248, + "n_ref": 3436 + }, + "2": { + "Dice": 0.8705882352941177, + "FN": 1, + "FP": 32, + "IoU": 0.7708333333333334, + "TN": 12656, + "TP": 111, + "n_pred": 143, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.6028169785816174, + "FN": 110.42857142857143, + "FP": 74.19047619047619, + "IoU": 0.5280818386203926, + "TN": 6752.357142857142, + "TP": 377.30952380952385, + "n_pred": 451.5, + "n_ref": 487.73809523809524 + }, + "mean": { + "1": { + "Dice": 0.45905467698404956, + "FN": 181.85714285714286, + "FP": 114.14285714285714, + "IoU": 0.38853892105383875, + "TN": 6736.428571428572, + "TP": 281.85714285714283, + "n_pred": 396.0, + "n_ref": 463.7142857142857 + }, + "2": { + "Dice": 0.6047972188520663, + "FN": 86.14285714285714, + "FP": 44.285714285714285, + "IoU": 0.5143344846578055, + "TN": 6886.071428571428, + "TP": 297.7857142857143, + "n_pred": 342.07142857142856, + "n_ref": 383.92857142857144 + }, + "3": { + "Dice": 0.7445990399087364, + "FN": 63.285714285714285, + "FP": 64.14285714285714, + "IoU": 0.6813721101495336, + "TN": 6634.571428571428, + "TP": 552.2857142857143, + "n_pred": 616.4285714285714, + "n_ref": 615.5714285714286 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.209366391184573, + "FN": 558, + "FP": 16, + "IoU": 0.11692307692307692, + "TN": 5750, + "TP": 76, + "n_pred": 92, + "n_ref": 634 + }, + "2": { + "Dice": 0.0, + "FN": 20, + "FP": 0, + "IoU": 0.0, + "TN": 6380, + "TP": 0, + "n_pred": 0, + "n_ref": 20 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.6619627966645285, + "FN": 370, + "FP": 157, + "IoU": 0.4947267497603068, + "TN": 5357, + "TP": 516, + "n_pred": 673, + "n_ref": 886 + }, + "3": { + "Dice": 0.8854241167214991, + "FN": 777, + "FP": 24, + "IoU": 0.7944045174537988, + "TN": 2504, + "TP": 3095, + "n_pred": 3119, + "n_ref": 3872 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.855072463768116, + "FN": 19, + "FP": 41, + "IoU": 0.7468354430379747, + "TN": 6163, + "TP": 177, + "n_pred": 218, + "n_ref": 196 + }, + "2": { + "Dice": 0.8660268714011516, + "FN": 328, + "FP": 21, + "IoU": 0.7637102234258633, + "TN": 4923, + "TP": 1128, + "n_pred": 1149, + "n_ref": 1456 + }, + "3": { + "Dice": 0.9064039408866995, + "FN": 20, + "FP": 37, + "IoU": 0.8288288288288288, + "TN": 6067, + "TP": 276, + "n_pred": 313, + "n_ref": 296 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8780487804878049, + "FN": 124, + "FP": 21, + "IoU": 0.782608695652174, + "TN": 5733, + "TP": 522, + "n_pred": 543, + "n_ref": 646 + }, + "3": { + "Dice": 0.9604395604395605, + "FN": 19, + "FP": 17, + "IoU": 0.9238900634249472, + "TN": 5927, + "TP": 437, + "n_pred": 454, + "n_ref": 456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9609592861126603, + "FN": 29, + "FP": 111, + "IoU": 0.9248523886205046, + "TN": 4537, + "TP": 1723, + "n_pred": 1834, + "n_ref": 1752 + }, + "2": { + "Dice": 0.9192280200142959, + "FN": 174, + "FP": 52, + "IoU": 0.8505291005291006, + "TN": 4888, + "TP": 1286, + "n_pred": 1338, + "n_ref": 1460 + }, + "3": { + "Dice": 0.9783344617467841, + "FN": 22, + "FP": 106, + "IoU": 0.9575878064943671, + "TN": 3382, + "TP": 2890, + "n_pred": 2996, + "n_ref": 2912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6838171388840605, + "FN": 1813, + "FP": 6, + "IoU": 0.5195456946645536, + "TN": 9014, + "TP": 1967, + "n_pred": 1973, + "n_ref": 3780 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 12789, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1424, + "IoU": 0.0, + "TN": 4976, + "TP": 0, + "n_pred": 1424, + "n_ref": 0 + }, + "2": { + "Dice": 0.7018867924528301, + "FN": 149, + "FP": 325, + "IoU": 0.5406976744186046, + "TN": 5368, + "TP": 558, + "n_pred": 883, + "n_ref": 707 + }, + "3": { + "Dice": 0.736992159657876, + "FN": 24, + "FP": 714, + "IoU": 0.5835214446952596, + "TN": 4628, + "TP": 1034, + "n_pred": 1748, + "n_ref": 1058 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.045112781954887216, + "FN": 127, + "FP": 0, + "IoU": 0.023076923076923078, + "TN": 6270, + "TP": 3, + "n_pred": 3, + "n_ref": 130 + }, + "2": { + "Dice": 0.8112244897959183, + "FN": 41, + "FP": 33, + "IoU": 0.6824034334763949, + "TN": 6167, + "TP": 159, + "n_pred": 192, + "n_ref": 200 + }, + "3": { + "Dice": 0.0, + "FN": 24, + "FP": 0, + "IoU": 0.0, + "TN": 6376, + "TP": 0, + "n_pred": 0, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.7863222986127699, + "FN": 87.09523809523812, + "FP": 62.42857142857144, + "IoU": 0.70589777787215, + "TN": 7049.4285714285725, + "TP": 572.4761904761905, + "n_pred": 634.9047619047619, + "n_ref": 659.5714285714286 + }, + "mean": { + "1": { + "Dice": 0.6239250901272948, + "FN": 166.57142857142858, + "FP": 112.64285714285714, + "IoU": 0.5298929622999085, + "TN": 6838.571428571428, + "TP": 653.6428571428571, + "n_pred": 766.2857142857143, + "n_ref": 820.2142857142857 + }, + "2": { + "Dice": 0.8903863637114068, + "FN": 74.57142857142857, + "FP": 54.07142857142857, + "IoU": 0.8032766140709412, + "TN": 7126.357142857143, + "TP": 516.4285714285714, + "n_pred": 570.5, + "n_ref": 591.0 + }, + "3": { + "Dice": 0.8446554419996086, + "FN": 20.142857142857142, + "FP": 20.571428571428573, + "IoU": 0.7845237572456005, + "TN": 7183.357142857143, + "TP": 547.3571428571429, + "n_pred": 567.9285714285714, + "n_ref": 567.5 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7462039045553145, + "FN": 1634, + "FP": 4, + "IoU": 0.5951557093425606, + "TN": 8754, + "TP": 2408, + "n_pred": 2412, + "n_ref": 4042 + }, + "2": { + "Dice": 0.8949175824175825, + "FN": 45, + "FP": 261, + "IoU": 0.8098197638284649, + "TN": 11191, + "TP": 1303, + "n_pred": 1564, + "n_ref": 1348 + }, + "3": { + "Dice": 0.9790590935169249, + "FN": 107, + "FP": 39, + "IoU": 0.958977240797977, + "TN": 9241, + "TP": 3413, + "n_pred": 3452, + "n_ref": 3520 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2222222222222222, + "FN": 63, + "FP": 0, + "IoU": 0.125, + "TN": 6328, + "TP": 9, + "n_pred": 9, + "n_ref": 72 + }, + "2": { + "Dice": 0.8656126482213439, + "FN": 8, + "FP": 128, + "IoU": 0.7630662020905923, + "TN": 5826, + "TP": 438, + "n_pred": 566, + "n_ref": 446 + }, + "3": { + "Dice": 0.9511677282377919, + "FN": 16, + "FP": 7, + "IoU": 0.9068825910931174, + "TN": 6153, + "TP": 224, + "n_pred": 231, + "n_ref": 240 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.2857142857142857, + "FN": 10, + "FP": 0, + "IoU": 0.16666666666666666, + "TN": 12788, + "TP": 2, + "n_pred": 2, + "n_ref": 12 + }, + "2": { + "Dice": 0.8807339449541285, + "FN": 33, + "FP": 84, + "IoU": 0.7868852459016393, + "TN": 12251, + "TP": 432, + "n_pred": 516, + "n_ref": 465 + }, + "3": { + "Dice": 0.25, + "FN": 0, + "FP": 24, + "IoU": 0.14285714285714285, + "TN": 12772, + "TP": 4, + "n_pred": 28, + "n_ref": 4 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8071570576540755, + "FN": 66, + "FP": 31, + "IoU": 0.6766666666666666, + "TN": 12500, + "TP": 203, + "n_pred": 234, + "n_ref": 269 + }, + "2": { + "Dice": 0.8798521256931608, + "FN": 352, + "FP": 38, + "IoU": 0.7854785478547854, + "TN": 10982, + "TP": 1428, + "n_pred": 1466, + "n_ref": 1780 + }, + "3": { + "Dice": 0.9682926829268292, + "FN": 30, + "FP": 100, + "IoU": 0.9385342789598109, + "TN": 10685, + "TP": 1985, + "n_pred": 2085, + "n_ref": 2015 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8906030855539971, + "FN": 63, + "FP": 93, + "IoU": 0.8027812895069533, + "TN": 5609, + "TP": 635, + "n_pred": 728, + "n_ref": 698 + }, + "2": { + "Dice": 0.8656534954407294, + "FN": 399, + "FP": 43, + "IoU": 0.7631296891747053, + "TN": 4534, + "TP": 1424, + "n_pred": 1467, + "n_ref": 1823 + }, + "3": { + "Dice": 0.9676190476190476, + "FN": 36, + "FP": 15, + "IoU": 0.9372693726937269, + "TN": 5587, + "TP": 762, + "n_pred": 777, + "n_ref": 798 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8343705122067975, + "FN": 254, + "FP": 438, + "IoU": 0.7158110882956878, + "TN": 3965, + "TP": 1743, + "n_pred": 2181, + "n_ref": 1997 + }, + "2": { + "Dice": 0.8950381679389313, + "FN": 94, + "FP": 126, + "IoU": 0.8100172711571675, + "TN": 5242, + "TP": 938, + "n_pred": 1064, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9325153374233128, + "FN": 46, + "FP": 64, + "IoU": 0.8735632183908046, + "TN": 5530, + "TP": 760, + "n_pred": 824, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9393269466961435, + "FN": 212, + "FP": 35, + "IoU": 0.8855951829550718, + "TN": 4241, + "TP": 1912, + "n_pred": 1947, + "n_ref": 2124 + }, + "2": { + "Dice": 0.8961352657004831, + "FN": 30, + "FP": 56, + "IoU": 0.811816192560175, + "TN": 5943, + "TP": 371, + "n_pred": 427, + "n_ref": 401 + }, + "3": { + "Dice": 0.7542857142857143, + "FN": 43, + "FP": 0, + "IoU": 0.6055045871559633, + "TN": 6291, + "TP": 66, + "n_pred": 66, + "n_ref": 109 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8897277965428174, + "FN": 30, + "FP": 525, + "IoU": 0.801360057265569, + "TN": 3606, + "TP": 2239, + "n_pred": 2764, + "n_ref": 2269 + }, + "2": { + "Dice": 0.9451476793248945, + "FN": 83, + "FP": 21, + "IoU": 0.896, + "TN": 5400, + "TP": 896, + "n_pred": 917, + "n_ref": 979 + }, + "3": { + "Dice": 0.9543039319872476, + "FN": 4, + "FP": 39, + "IoU": 0.9126016260162602, + "TN": 5908, + "TP": 449, + "n_pred": 488, + "n_ref": 453 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 451, + "IoU": 0.0, + "TN": 5949, + "TP": 0, + "n_pred": 451, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.7414209138821427, + "FN": 144.55555555555554, + "FP": 88.57777777777778, + "IoU": 0.6483815862787802, + "TN": 7570.711111111111, + "TP": 729.4888888888889, + "n_pred": 818.0666666666666, + "n_ref": 874.0444444444444 + }, + "mean": { + "1": { + "Dice": 0.52927673462116, + "FN": 83.2, + "FP": 80.46666666666667, + "IoU": 0.43738220696457003, + "TN": 8040.4, + "TP": 329.26666666666665, + "n_pred": 409.73333333333335, + "n_ref": 412.46666666666664 + }, + "2": { + "Dice": 0.8131672937302086, + "FN": 220.8, + "FP": 102.33333333333333, + "IoU": 0.7010857598719306, + "TN": 7523.733333333334, + "TP": 686.4666666666667, + "n_pred": 788.8, + "n_ref": 907.2666666666667 + }, + "3": { + "Dice": 0.8818187132950596, + "FN": 129.66666666666666, + "FP": 82.93333333333334, + "IoU": 0.80667679199984, + "TN": 7148.0, + "TP": 1172.7333333333333, + "n_pred": 1255.6666666666667, + "n_ref": 1302.4 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8663057059558518, + "FN": 238, + "FP": 83, + "IoU": 0.7641440117560617, + "TN": 5039, + "TP": 1040, + "n_pred": 1123, + "n_ref": 1278 + }, + "3": { + "Dice": 0.9784234138004699, + "FN": 52, + "FP": 49, + "IoU": 0.9577582601421999, + "TN": 4009, + "TP": 2290, + "n_pred": 2339, + "n_ref": 2342 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 614, + "IoU": 0.0, + "TN": 5786, + "TP": 0, + "n_pred": 614, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.898560103543116, + "FN": 621, + "FP": 6, + "IoU": 0.8158049353701528, + "TN": 9396, + "TP": 2777, + "n_pred": 2783, + "n_ref": 3398 + }, + "2": { + "Dice": 0.8998178506375227, + "FN": 0, + "FP": 110, + "IoU": 0.8178807947019867, + "TN": 12196, + "TP": 494, + "n_pred": 604, + "n_ref": 494 + }, + "3": { + "Dice": 0.8178137651821862, + "FN": 45, + "FP": 0, + "IoU": 0.6917808219178082, + "TN": 12654, + "TP": 101, + "n_pred": 101, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5310344827586206, + "FN": 495, + "FP": 185, + "IoU": 0.3615023474178404, + "TN": 5335, + "TP": 385, + "n_pred": 570, + "n_ref": 880 + }, + "3": { + "Dice": 0.6947323884070234, + "FN": 1442, + "FP": 1, + "IoU": 0.5322528363047002, + "TN": 3315, + "TP": 1642, + "n_pred": 1643, + "n_ref": 3084 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.875, + "FN": 204, + "FP": 32, + "IoU": 0.7777777777777778, + "TN": 11738, + "TP": 826, + "n_pred": 858, + "n_ref": 1030 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.548936170212766, + "FN": 59, + "FP": 365, + "IoU": 0.3782991202346041, + "TN": 12118, + "TP": 258, + "n_pred": 623, + "n_ref": 317 + }, + "2": { + "Dice": 0.7845334062030332, + "FN": 1508, + "FP": 69, + "IoU": 0.6454586330935251, + "TN": 8352, + "TP": 2871, + "n_pred": 2940, + "n_ref": 4379 + }, + "3": { + "Dice": 0.6675479180436219, + "FN": 8, + "FP": 495, + "IoU": 0.5009920634920635, + "TN": 11792, + "TP": 505, + "n_pred": 1000, + "n_ref": 513 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.18528610354223432, + "FN": 296, + "FP": 3, + "IoU": 0.1021021021021021, + "TN": 12467, + "TP": 34, + "n_pred": 37, + "n_ref": 330 + }, + "2": { + "Dice": 0.6890088043169554, + "FN": 467, + "FP": 628, + "IoU": 0.5255632582322357, + "TN": 10492, + "TP": 1213, + "n_pred": 1841, + "n_ref": 1680 + }, + "3": { + "Dice": 0.9472502805836139, + "FN": 212, + "FP": 305, + "IoU": 0.8997867803837953, + "TN": 7641, + "TP": 4642, + "n_pred": 4947, + "n_ref": 4854 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7450980392156863, + "FN": 5, + "FP": 8, + "IoU": 0.59375, + "TN": 6368, + "TP": 19, + "n_pred": 27, + "n_ref": 24 + }, + "2": { + "Dice": 0.9039684943956376, + "FN": 196, + "FP": 121, + "IoU": 0.8247650635710337, + "TN": 4591, + "TP": 1492, + "n_pred": 1613, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9736693411684936, + "FN": 100, + "FP": 133, + "IoU": 0.9486897159216031, + "TN": 1859, + "TP": 4308, + "n_pred": 4441, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 11, + "IoU": 0.0, + "TN": 6389, + "TP": 0, + "n_pred": 11, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.59375, + "FN": 26, + "FP": 26, + "IoU": 0.4222222222222222, + "TN": 6310, + "TP": 38, + "n_pred": 64, + "n_ref": 64 + }, + "2": { + "Dice": 0.827683615819209, + "FN": 193, + "FP": 173, + "IoU": 0.7060240963855422, + "TN": 5155, + "TP": 879, + "n_pred": 1052, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9613754121526142, + "FN": 13, + "FP": 151, + "IoU": 0.9256235827664399, + "TN": 4195, + "TP": 2041, + "n_pred": 2192, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9168601950766373, + "FN": 37, + "FP": 142, + "IoU": 0.8464837049742711, + "TN": 11634, + "TP": 987, + "n_pred": 1129, + "n_ref": 1024 + }, + "2": { + "Dice": 0.9276116168183789, + "FN": 98, + "FP": 69, + "IoU": 0.8649959579628133, + "TN": 11563, + "TP": 1070, + "n_pred": 1139, + "n_ref": 1168 + }, + "3": { + "Dice": 0.9253486464315013, + "FN": 52, + "FP": 39, + "IoU": 0.8610687022900764, + "TN": 12145, + "TP": 564, + "n_pred": 603, + "n_ref": 616 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8885416666666667, + "FN": 117, + "FP": 97, + "IoU": 0.7994376757263355, + "TN": 5333, + "TP": 853, + "n_pred": 950, + "n_ref": 970 + }, + "3": { + "Dice": 0.9702072538860104, + "FN": 21, + "FP": 71, + "IoU": 0.9421383647798742, + "TN": 4810, + "TP": 1498, + "n_pred": 1569, + "n_ref": 1519 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3240818/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.7161409359705833, + "FN": 103.30158730158732, + "FP": 68.10603174603175, + "IoU": 0.6362346847316469, + "TN": 7368.808888888889, + "TP": 566.4501587301587, + "n_pred": 634.5561904761905, + "n_ref": 669.751746031746 + }, + "mean": { + "1": { + "Dice": 0.5377034375293208, + "FN": 131.56857142857143, + "FP": 80.05047619047619, + "IoU": 0.45112957971867285, + "TN": 7472.522857142857, + "TP": 422.52476190476193, + "n_pred": 502.5752380952381, + "n_ref": 554.0933333333334 + }, + "2": { + "Dice": 0.75804594693754, + "FN": 114.87428571428572, + "FP": 79.66666666666666, + "IoU": 0.6615925351327208, + "TN": 7412.418095238097, + "TP": 499.707619047619, + "n_pred": 579.3742857142857, + "n_ref": 614.5819047619049 + }, + "3": { + "Dice": 0.8526734234448892, + "FN": 63.46190476190476, + "FP": 44.600952380952386, + "IoU": 0.795981939343547, + "TN": 7221.4857142857145, + "TP": 777.1180952380953, + "n_pred": 821.7190476190477, + "n_ref": 840.5799999999999 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_003/summary.json b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_003/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..dd48be773d1b1e73ae03c855976e23a1a1e3a2c4 --- /dev/null +++ b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_003/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.840013619912617, + "FN": 1522.506666666667, + "FP": 1122.44, + "IoU": 0.7410144338625444, + "TN": 843112.0866666666, + "TP": 8671.606666666667, + "n_pred": 9794.046666666667, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.7951484620240818, + "FN": 2221.22, + "FP": 1209.32, + "IoU": 0.6711294974459109, + "TN": 843365.26, + "TP": 7632.84, + "n_pred": 8842.16, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8240691717954222, + "FN": 1592.74, + "FP": 1431.48, + "IoU": 0.7161569282268861, + "TN": 842941.66, + "TP": 8462.76, + "n_pred": 9894.24, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.900823225918347, + "FN": 753.56, + "FP": 726.52, + "IoU": 0.8357568759148363, + "TN": 843029.34, + "TP": 9919.22, + "n_pred": 10645.74, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8476034412126178, + "FN": 1101, + "FP": 2619, + "IoU": 0.7355136864557412, + "TN": 1091855, + "TP": 10345, + "n_pred": 12964, + "n_ref": 11446 + }, + "2": { + "Dice": 0.855868128874055, + "FN": 891, + "FP": 3341, + "IoU": 0.7480502470679288, + "TN": 1089123, + "TP": 12565, + "n_pred": 15906, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9432333606409975, + "FN": 605, + "FP": 2236, + "IoU": 0.8925654212675843, + "TN": 1079476, + "TP": 23603, + "n_pred": 25839, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.81167956916863, + "FN": 55, + "FP": 2183, + "IoU": 0.6830477269508568, + "TN": 1098859, + "TP": 4823, + "n_pred": 7006, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8809755180088399, + "FN": 1928, + "FP": 1869, + "IoU": 0.7872709955739817, + "TN": 1088071, + "TP": 14052, + "n_pred": 15921, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9238720347304771, + "FN": 606, + "FP": 2340, + "IoU": 0.8585150321775046, + "TN": 1085098, + "TP": 17876, + "n_pred": 20216, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7955713720838276, + "FN": 2834, + "FP": 268, + "IoU": 0.6605384110308602, + "TN": 900302, + "TP": 6036, + "n_pred": 6304, + "n_ref": 8870 + }, + "2": { + "Dice": 0.8986895348405539, + "FN": 1682, + "FP": 1047, + "IoU": 0.8160183374907302, + "TN": 894607, + "TP": 12104, + "n_pred": 13151, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9736439940751886, + "FN": 706, + "FP": 415, + "IoU": 0.9486415906904293, + "TN": 887613, + "TP": 20706, + "n_pred": 21121, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7516405855628471, + "FN": 2511, + "FP": 441, + "IoU": 0.6021027092600081, + "TN": 902021, + "TP": 4467, + "n_pred": 4908, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8908841237984578, + "FN": 1673, + "FP": 1426, + "IoU": 0.8032380952380952, + "TN": 893690, + "TP": 12651, + "n_pred": 14077, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9680877111842642, + "FN": 842, + "FP": 331, + "IoU": 0.938149222251516, + "TN": 890475, + "TP": 17792, + "n_pred": 18123, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9197439892205987, + "FN": 2335, + "FP": 1477, + "IoU": 0.8514129799259403, + "TN": 1400105, + "TP": 21843, + "n_pred": 23320, + "n_ref": 24178 + }, + "2": { + "Dice": 0.879476920074168, + "FN": 1566, + "FP": 2139, + "IoU": 0.7848806828078732, + "TN": 1408537, + "TP": 13518, + "n_pred": 15657, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9734777150031387, + "FN": 464, + "FP": 888, + "IoU": 0.948325944045253, + "TN": 1399596, + "TP": 24812, + "n_pred": 25700, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8775197960005369, + "FN": 1204, + "FP": 3359, + "IoU": 0.7817686163852886, + "TN": 1404851, + "TP": 16346, + "n_pred": 19705, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8787397491167223, + "FN": 1513, + "FP": 2228, + "IoU": 0.7837072155411656, + "TN": 1408464, + "TP": 13555, + "n_pred": 15783, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9700638344706142, + "FN": 665, + "FP": 695, + "IoU": 0.9418679204958325, + "TN": 1402365, + "TP": 22035, + "n_pred": 22730, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8376619427042151, + "FN": 2372, + "FP": 297, + "IoU": 0.7206698063840921, + "TN": 752493, + "TP": 6886, + "n_pred": 7183, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8756722556153116, + "FN": 1106, + "FP": 1252, + "IoU": 0.7788407428249859, + "TN": 751386, + "TP": 8304, + "n_pred": 9556, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9726487674674203, + "FN": 529, + "FP": 342, + "IoU": 0.9467538818926519, + "TN": 745690, + "TP": 15487, + "n_pred": 15829, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7939157071934086, + "FN": 1160, + "FP": 791, + "IoU": 0.6582588894727623, + "TN": 756339, + "TP": 3758, + "n_pred": 4549, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8007098661806321, + "FN": 2891, + "FP": 1264, + "IoU": 0.6676531754919213, + "TN": 749546, + "TP": 8347, + "n_pred": 9611, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9456655530156497, + "FN": 1156, + "FP": 80, + "IoU": 0.8969312875250167, + "TN": 750056, + "TP": 10756, + "n_pred": 10836, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.644411778652378, + "FN": 7049, + "FP": 450, + "IoU": 0.4753742829159088, + "TN": 1063978, + "TP": 6795, + "n_pred": 7245, + "n_ref": 13844 + }, + "2": { + "Dice": 0.6563291139240506, + "FN": 2611, + "FP": 4991, + "IoU": 0.4884597268016957, + "TN": 1063411, + "TP": 7259, + "n_pred": 12250, + "n_ref": 9870 + }, + "3": { + "Dice": 0.8073517660220553, + "FN": 5775, + "FP": 252, + "IoU": 0.6769403945111492, + "TN": 1059616, + "TP": 12629, + "n_pred": 12881, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6698905822586948, + "FN": 6439, + "FP": 319, + "IoU": 0.5036356959236137, + "TN": 1064657, + "TP": 6857, + "n_pred": 7176, + "n_ref": 13296 + }, + "2": { + "Dice": 0.6820115534458824, + "FN": 3185, + "FP": 3916, + "IoU": 0.5174639847784724, + "TN": 1063556, + "TP": 7615, + "n_pred": 11531, + "n_ref": 10800 + }, + "3": { + "Dice": 0.8093044504511364, + "FN": 4597, + "FP": 412, + "IoU": 0.6796904975060749, + "TN": 1062634, + "TP": 10629, + "n_pred": 11041, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8782981724158194, + "FN": 1659, + "FP": 412, + "IoU": 0.7830050293378038, + "TN": 1096376, + "TP": 7473, + "n_pred": 7885, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8334513348048811, + "FN": 1476, + "FP": 2523, + "IoU": 0.7144591217422349, + "TN": 1091915, + "TP": 10006, + "n_pred": 12529, + "n_ref": 11482 + }, + "3": { + "Dice": 0.8994498518831994, + "FN": 869, + "FP": 1507, + "IoU": 0.8172729370145351, + "TN": 1092917, + "TP": 10627, + "n_pred": 12134, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8324439701173959, + "FN": 712, + "FP": 230, + "IoU": 0.7129798903107861, + "TN": 1102638, + "TP": 2340, + "n_pred": 2570, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8541011942174733, + "FN": 1481, + "FP": 2233, + "IoU": 0.7453548165923894, + "TN": 1091335, + "TP": 10871, + "n_pred": 13104, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7521694742215416, + "FN": 333, + "FP": 1609, + "IoU": 0.6027817549601145, + "TN": 1101031, + "TP": 2947, + "n_pred": 4556, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8929743926460932, + "FN": 1004, + "FP": 952, + "IoU": 0.8066429418742586, + "TN": 1136764, + "TP": 8160, + "n_pred": 9112, + "n_ref": 9164 + }, + "2": { + "Dice": 0.9068918778021061, + "FN": 2020, + "FP": 1552, + "IoU": 0.8296451735978634, + "TN": 1125912, + "TP": 17396, + "n_pred": 18948, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9447620685208271, + "FN": 941, + "FP": 344, + "IoU": 0.895307153332247, + "TN": 1134606, + "TP": 10989, + "n_pred": 11333, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6171188383645395, + "FN": 851, + "FP": 1153, + "IoU": 0.4462558717877867, + "TN": 1143261, + "TP": 1615, + "n_pred": 2768, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8560724864959052, + "FN": 4784, + "FP": 1824, + "IoU": 0.7483625285605484, + "TN": 1120620, + "TP": 19652, + "n_pred": 21476, + "n_ref": 24436 + }, + "3": { + "Dice": 0.5953629267156006, + "FN": 161, + "FP": 3312, + "IoU": 0.42385534173855344, + "TN": 1140852, + "TP": 2555, + "n_pred": 5867, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9221260815822002, + "FN": 1402, + "FP": 362, + "IoU": 0.8555045871559633, + "TN": 788592, + "TP": 10444, + "n_pred": 10806, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8810766910314421, + "FN": 1040, + "FP": 1010, + "IoU": 0.7874326005806719, + "TN": 791156, + "TP": 7594, + "n_pred": 8604, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9566352257222519, + "FN": 590, + "FP": 141, + "IoU": 0.9168751421423698, + "TN": 792006, + "TP": 8063, + "n_pred": 8204, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6770384254920337, + "FN": 327, + "FP": 3119, + "IoU": 0.5117597052989515, + "TN": 793742, + "TP": 3612, + "n_pred": 6731, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8806128963609279, + "FN": 2307, + "FP": 498, + "IoU": 0.7866920152091255, + "TN": 787650, + "TP": 10345, + "n_pred": 10843, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8538011695906432, + "FN": 145, + "FP": 780, + "IoU": 0.7448979591836735, + "TN": 797174, + "TP": 2701, + "n_pred": 3481, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9375176503812482, + "FN": 913, + "FP": 857, + "IoU": 0.8823842115755199, + "TN": 1332791, + "TP": 13279, + "n_pred": 14136, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8854392187571974, + "FN": 995, + "FP": 1492, + "IoU": 0.7944288312117705, + "TN": 1335742, + "TP": 9611, + "n_pred": 11103, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9754890678941311, + "FN": 374, + "FP": 478, + "IoU": 0.9521509603504437, + "TN": 1330034, + "TP": 16954, + "n_pred": 17432, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7128521806252412, + "FN": 327, + "FP": 4137, + "IoU": 0.5538230884557721, + "TN": 1337835, + "TP": 5541, + "n_pred": 9678, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8727885425442291, + "FN": 1754, + "FP": 1266, + "IoU": 0.7742899850523169, + "TN": 1334460, + "TP": 10360, + "n_pred": 11626, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9566372439797755, + "FN": 455, + "FP": 557, + "IoU": 0.9168788501026695, + "TN": 1335665, + "TP": 11163, + "n_pred": 11720, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8665109095948996, + "FN": 1521, + "FP": 1850, + "IoU": 0.7644633873672443, + "TN": 837656, + "TP": 10941, + "n_pred": 12791, + "n_ref": 12462 + }, + "2": { + "Dice": 0.837617237008872, + "FN": 1187, + "FP": 2016, + "IoU": 0.7206036287508722, + "TN": 840504, + "TP": 8261, + "n_pred": 10277, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9674122795096893, + "FN": 691, + "FP": 508, + "IoU": 0.9368814487260476, + "TN": 832972, + "TP": 17797, + "n_pred": 18305, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8442138636691165, + "FN": 1080, + "FP": 1082, + "IoU": 0.730423940149626, + "TN": 843948, + "TP": 5858, + "n_pred": 6940, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8535822680033109, + "FN": 2011, + "FP": 1173, + "IoU": 0.7445647813878861, + "TN": 839503, + "TP": 9281, + "n_pred": 10454, + "n_ref": 11292 + }, + "3": { + "Dice": 0.9515469485379214, + "FN": 663, + "FP": 593, + "IoU": 0.9075723011259107, + "TN": 838379, + "TP": 12333, + "n_pred": 12926, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7240064231232437, + "FN": 2249, + "FP": 501, + "IoU": 0.5674060091238006, + "TN": 845611, + "TP": 3607, + "n_pred": 4108, + "n_ref": 5856 + }, + "2": { + "Dice": 0.8393919365499009, + "FN": 1830, + "FP": 1572, + "IoU": 0.7232346241457859, + "TN": 839676, + "TP": 8890, + "n_pred": 10462, + "n_ref": 10720 + }, + "3": { + "Dice": 0.914074197304941, + "FN": 1967, + "FP": 99, + "IoU": 0.8417464572960551, + "TN": 838913, + "TP": 10989, + "n_pred": 11088, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7585055312043415, + "FN": 287, + "FP": 870, + "IoU": 0.6109616677874916, + "TN": 848994, + "TP": 1817, + "n_pred": 2687, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8714087410087074, + "FN": 2228, + "FP": 829, + "IoU": 0.7721207603428998, + "TN": 838553, + "TP": 10358, + "n_pred": 11187, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9294392523364486, + "FN": 790, + "FP": 418, + "IoU": 0.8681798341335661, + "TN": 842804, + "TP": 7956, + "n_pred": 8374, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7570908772083644, + "FN": 4453, + "FP": 1088, + "IoU": 0.6091281038374717, + "TN": 782864, + "TP": 8635, + "n_pred": 9723, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8047030904481959, + "FN": 1394, + "FP": 2227, + "IoU": 0.6732244382275968, + "TN": 785959, + "TP": 7460, + "n_pred": 9687, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9453205939910211, + "FN": 1140, + "FP": 285, + "IoU": 0.8963108491595722, + "TN": 783297, + "TP": 12318, + "n_pred": 12603, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7712683289411447, + "FN": 1961, + "FP": 1424, + "IoU": 0.6276946766388033, + "TN": 787948, + "TP": 5707, + "n_pred": 7131, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8117040311546153, + "FN": 1910, + "FP": 1668, + "IoU": 0.683082373782108, + "TN": 785750, + "TP": 7712, + "n_pred": 9380, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9404646383926023, + "FN": 794, + "FP": 249, + "IoU": 0.8876198685486478, + "TN": 787759, + "TP": 8238, + "n_pred": 8487, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8854840063806565, + "FN": 1921, + "FP": 807, + "IoU": 0.7945009416195857, + "TN": 883395, + "TP": 10547, + "n_pred": 11354, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8335130895185803, + "FN": 1837, + "FP": 1559, + "IoU": 0.7145498865260149, + "TN": 884773, + "TP": 8501, + "n_pred": 10060, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9377069862797666, + "FN": 360, + "FP": 1220, + "IoU": 0.8827197149643705, + "TN": 883198, + "TP": 11892, + "n_pred": 13112, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7485865058424426, + "FN": 1391, + "FP": 1944, + "IoU": 0.5981927710843373, + "TN": 888370, + "TP": 4965, + "n_pred": 6909, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8677159035177672, + "FN": 1787, + "FP": 1180, + "IoU": 0.7663411560875728, + "TN": 883972, + "TP": 9731, + "n_pred": 10911, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9316263207916364, + "FN": 494, + "FP": 729, + "IoU": 0.8720041862899006, + "TN": 887115, + "TP": 8332, + "n_pred": 9061, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9393785960874569, + "FN": 1016, + "FP": 301, + "IoU": 0.8856870063362555, + "TN": 750527, + "TP": 10204, + "n_pred": 10505, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9176713744402343, + "FN": 1088, + "FP": 585, + "IoU": 0.8478676002546149, + "TN": 751051, + "TP": 9324, + "n_pred": 9909, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9728215420638903, + "FN": 119, + "FP": 531, + "IoU": 0.9470813319221688, + "TN": 749765, + "TP": 11633, + "n_pred": 12164, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7674747255136428, + "FN": 262, + "FP": 1877, + "IoU": 0.6226847768565885, + "TN": 756379, + "TP": 3530, + "n_pred": 5407, + "n_ref": 3792 + }, + "2": { + "Dice": 0.8851321291929887, + "FN": 1684, + "FP": 898, + "IoU": 0.7939345570630487, + "TN": 749518, + "TP": 9948, + "n_pred": 10846, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9421692005528479, + "FN": 358, + "FP": 437, + "IoU": 0.890661532113877, + "TN": 754777, + "TP": 6476, + "n_pred": 6913, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8113570741097209, + "FN": 355, + "FP": 3173, + "IoU": 0.682591093117409, + "TN": 984213, + "TP": 7587, + "n_pred": 10760, + "n_ref": 7942 + }, + "2": { + "Dice": 0.7901697274722921, + "FN": 1369, + "FP": 2550, + "IoU": 0.6531244468047442, + "TN": 984030, + "TP": 7379, + "n_pred": 9929, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9601163636363637, + "FN": 44, + "FP": 1327, + "IoU": 0.9232921166004588, + "TN": 977455, + "TP": 16502, + "n_pred": 17829, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6268390548372715, + "FN": 430, + "FP": 2918, + "IoU": 0.4564935064935065, + "TN": 989168, + "TP": 2812, + "n_pred": 5730, + "n_ref": 3242 + }, + "2": { + "Dice": 0.796732442181201, + "FN": 824, + "FP": 3008, + "IoU": 0.6621407159231176, + "TN": 983986, + "TP": 7510, + "n_pred": 10518, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9177137870855149, + "FN": 97, + "FP": 1789, + "IoU": 0.8479400145126179, + "TN": 982925, + "TP": 10517, + "n_pred": 12306, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9448102739476844, + "FN": 1339, + "FP": 178, + "IoU": 0.895393738794649, + "TN": 743514, + "TP": 12985, + "n_pred": 13163, + "n_ref": 14324 + }, + "2": { + "Dice": 0.8899030233884769, + "FN": 1012, + "FP": 918, + "IoU": 0.8016443987667009, + "TN": 748286, + "TP": 7800, + "n_pred": 8718, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9695860566448802, + "FN": 176, + "FP": 522, + "IoU": 0.9409675236806495, + "TN": 746192, + "TP": 11126, + "n_pred": 11648, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7107601184600197, + "FN": 556, + "FP": 3253, + "IoU": 0.5513016845329249, + "TN": 749527, + "TP": 4680, + "n_pred": 7933, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8877262292456356, + "FN": 1018, + "FP": 1085, + "IoU": 0.7981184602092734, + "TN": 747599, + "TP": 8314, + "n_pred": 9399, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8151866959523062, + "FN": 295, + "FP": 1472, + "IoU": 0.6880296610169492, + "TN": 752352, + "TP": 3897, + "n_pred": 5369, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9179933110367893, + "FN": 1084, + "FP": 142, + "IoU": 0.8484174085064293, + "TN": 630888, + "TP": 6862, + "n_pred": 7004, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8828762725855269, + "FN": 553, + "FP": 724, + "IoU": 0.790311986863711, + "TN": 632886, + "TP": 4813, + "n_pred": 5537, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9568194522079374, + "FN": 487, + "FP": 131, + "IoU": 0.9172136637642331, + "TN": 631511, + "TP": 6847, + "n_pred": 6978, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.727408328154133, + "FN": 94, + "FP": 2099, + "IoU": 0.5715960148466498, + "TN": 633857, + "TP": 2926, + "n_pred": 5025, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9073280404693318, + "FN": 895, + "FP": 424, + "IoU": 0.8303755144032922, + "TN": 631200, + "TP": 6457, + "n_pred": 6881, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9036807705538356, + "FN": 129, + "FP": 431, + "IoU": 0.8242861625352996, + "TN": 635789, + "TP": 2627, + "n_pred": 3058, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8530885418571481, + "FN": 3777, + "FP": 240, + "IoU": 0.7438137755102041, + "TN": 967360, + "TP": 11663, + "n_pred": 11903, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8713456048823703, + "FN": 1044, + "FP": 1570, + "IoU": 0.7720216291644864, + "TN": 971574, + "TP": 8852, + "n_pred": 10422, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9654436389062673, + "FN": 101, + "FP": 838, + "IoU": 0.9331957882754696, + "TN": 968984, + "TP": 13117, + "n_pred": 13955, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9257095158597662, + "FN": 643, + "FP": 247, + "IoU": 0.8616938616938616, + "TN": 976605, + "TP": 5545, + "n_pred": 5792, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9022632700700294, + "FN": 1066, + "FP": 860, + "IoU": 0.821930473372781, + "TN": 972224, + "TP": 8890, + "n_pred": 9750, + "n_ref": 9956 + }, + "3": { + "Dice": 0.8389885454938405, + "FN": 167, + "FP": 2068, + "IoU": 0.7226358897989575, + "TN": 974982, + "TP": 5823, + "n_pred": 7891, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8476249654791495, + "FN": 3903, + "FP": 511, + "IoU": 0.7355461026900725, + "TN": 1031885, + "TP": 12277, + "n_pred": 12788, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8799283154121864, + "FN": 852, + "FP": 1292, + "IoU": 0.7856, + "TN": 1038576, + "TP": 7856, + "n_pred": 9148, + "n_ref": 8708 + }, + "3": { + "Dice": 0.9674201592792213, + "FN": 234, + "FP": 576, + "IoU": 0.9368962293549392, + "TN": 1035740, + "TP": 12026, + "n_pred": 12602, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8721804511278195, + "FN": 326, + "FP": 1170, + "IoU": 0.7733333333333333, + "TN": 1041976, + "TP": 5104, + "n_pred": 6274, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8467305289462724, + "FN": 2190, + "FP": 754, + "IoU": 0.7342000722282412, + "TN": 1037500, + "TP": 8132, + "n_pred": 8886, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9377488588909391, + "FN": 252, + "FP": 389, + "IoU": 0.8827939294203694, + "TN": 1043107, + "TP": 4828, + "n_pred": 5217, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.70954310150799, + "FN": 4857, + "FP": 305, + "IoU": 0.5498386674805965, + "TN": 477749, + "TP": 6305, + "n_pred": 6610, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7803449397982427, + "FN": 319, + "FP": 1031, + "IoU": 0.6398078975453575, + "TN": 485468, + "TP": 2398, + "n_pred": 3429, + "n_ref": 2717 + }, + "3": { + "Dice": 0.964563158454826, + "FN": 119, + "FP": 214, + "IoU": 0.931551901336074, + "TN": 484351, + "TP": 4532, + "n_pred": 4746, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8077464205909128, + "FN": 1771, + "FP": 552, + "IoU": 0.6774954879911148, + "TN": 482013, + "TP": 4880, + "n_pred": 5432, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8598842522083461, + "FN": 537, + "FP": 383, + "IoU": 0.7542078546620358, + "TN": 485473, + "TP": 2823, + "n_pred": 3206, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8853552192869967, + "FN": 64, + "FP": 383, + "IoU": 0.7942936033133916, + "TN": 487043, + "TP": 1726, + "n_pred": 2109, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8373293194280185, + "FN": 4194, + "FP": 345, + "IoU": 0.7201775476234511, + "TN": 464259, + "TP": 11682, + "n_pred": 12027, + "n_ref": 15876 + }, + "2": { + "Dice": 0.8012502694546239, + "FN": 802, + "FP": 1042, + "IoU": 0.6684049631361266, + "TN": 474919, + "TP": 3717, + "n_pred": 4759, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9465151624810016, + "FN": 421, + "FP": 318, + "IoU": 0.898461115691124, + "TN": 473202, + "TP": 6539, + "n_pred": 6857, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8803154041115179, + "FN": 2233, + "FP": 317, + "IoU": 0.7862173038229376, + "TN": 468552, + "TP": 9378, + "n_pred": 9695, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8213484242365109, + "FN": 1453, + "FP": 378, + "IoU": 0.6968543046357616, + "TN": 474440, + "TP": 4209, + "n_pred": 4587, + "n_ref": 5662 + }, + "3": { + "Dice": 0.8884844473858372, + "FN": 121, + "FP": 553, + "IoU": 0.7993450431676095, + "TN": 477121, + "TP": 2685, + "n_pred": 3238, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7056003486598388, + "FN": 9339, + "FP": 118, + "IoU": 0.5451178451178451, + "TN": 623850, + "TP": 11333, + "n_pred": 11451, + "n_ref": 20672 + }, + "2": { + "Dice": 0.786833855799373, + "FN": 2038, + "FP": 1770, + "IoU": 0.648578811369509, + "TN": 633804, + "TP": 7028, + "n_pred": 8798, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9282340393112906, + "FN": 1814, + "FP": 70, + "IoU": 0.8660790446403185, + "TN": 630572, + "TP": 12184, + "n_pred": 12254, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7338742067635955, + "FN": 6196, + "FP": 430, + "IoU": 0.5796218753965233, + "TN": 628878, + "TP": 9136, + "n_pred": 9566, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8372283350004547, + "FN": 2959, + "FP": 621, + "IoU": 0.7200281535934934, + "TN": 631853, + "TP": 9207, + "n_pred": 9828, + "n_ref": 12166 + }, + "3": { + "Dice": 0.914815063435591, + "FN": 748, + "FP": 521, + "IoU": 0.8430038352096993, + "TN": 636557, + "TP": 6814, + "n_pred": 7335, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7852196382428941, + "FN": 6858, + "FP": 1454, + "IoU": 0.6463881562154343, + "TN": 540974, + "TP": 15194, + "n_pred": 16648, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7950085324232082, + "FN": 742, + "FP": 1180, + "IoU": 0.659762789874314, + "TN": 558831, + "TP": 3727, + "n_pred": 4907, + "n_ref": 4469 + }, + "3": { + "Dice": 0.950561797752809, + "FN": 283, + "FP": 509, + "IoU": 0.9057815845824411, + "TN": 556074, + "TP": 7614, + "n_pred": 8123, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6984049079754602, + "FN": 1317, + "FP": 4828, + "IoU": 0.5365761689291101, + "TN": 551220, + "TP": 7115, + "n_pred": 11943, + "n_ref": 8432 + }, + "2": { + "Dice": 0.855625893404125, + "FN": 673, + "FP": 741, + "IoU": 0.7476802284082797, + "TN": 558876, + "TP": 4190, + "n_pred": 4931, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8842941257017664, + "FN": 223, + "FP": 622, + "IoU": 0.7925871379479626, + "TN": 560406, + "TP": 3229, + "n_pred": 3851, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5293951650832471, + "FN": 4761, + "FP": 242, + "IoU": 0.35998464884226683, + "TN": 411063, + "TP": 2814, + "n_pred": 3056, + "n_ref": 7575 + }, + "2": { + "Dice": 0.11795543905635648, + "FN": 2676, + "FP": 16, + "IoU": 0.06267409470752089, + "TN": 416008, + "TP": 180, + "n_pred": 196, + "n_ref": 2856 + }, + "3": { + "Dice": 0.20886207613896401, + "FN": 3697, + "FP": 106, + "IoU": 0.11660859465737515, + "TN": 414575, + "TP": 502, + "n_pred": 608, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5742935278030994, + "FN": 2217, + "FP": 1519, + "IoU": 0.40281329923273657, + "TN": 412624, + "TP": 2520, + "n_pred": 4039, + "n_ref": 4737 + }, + "2": { + "Dice": 0.3550549745240011, + "FN": 2331, + "FP": 74, + "IoU": 0.21584610368438215, + "TN": 415813, + "TP": 662, + "n_pred": 736, + "n_ref": 2993 + }, + "3": { + "Dice": 0.7550626808100289, + "FN": 817, + "FP": 199, + "IoU": 0.6065065840433772, + "TN": 416298, + "TP": 1566, + "n_pred": 1765, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8932000474139634, + "FN": 2263, + "FP": 440, + "IoU": 0.807011280879623, + "TN": 482504, + "TP": 11303, + "n_pred": 11743, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8741337205464986, + "FN": 1050, + "FP": 857, + "IoU": 0.7764098956501349, + "TN": 487981, + "TP": 6622, + "n_pred": 7479, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9531366228613936, + "FN": 84, + "FP": 672, + "IoU": 0.9104689720511606, + "TN": 488066, + "TP": 7688, + "n_pred": 8360, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.882201135506412, + "FN": 2152, + "FP": 815, + "IoU": 0.7892306599417489, + "TN": 482433, + "TP": 11110, + "n_pred": 11925, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8715556919300399, + "FN": 1375, + "FP": 718, + "IoU": 0.7723515336088753, + "TN": 487316, + "TP": 7101, + "n_pred": 7819, + "n_ref": 8476 + }, + "3": { + "Dice": 0.8743343982960596, + "FN": 116, + "FP": 828, + "IoU": 0.7767265846736046, + "TN": 492282, + "TP": 3284, + "n_pred": 4112, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_003/summary_cross_val.json b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_003/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..d2d2aa727623d95eb542aabc08b5d6ba0d3160a6 --- /dev/null +++ b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_003/summary_cross_val.json @@ -0,0 +1,3228 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.7713566712832572, + "FN": 107.04166666666667, + "FP": 49.895833333333336, + "IoU": 0.6997355755066428, + "TN": 7857.791666666667, + "TP": 785.2708333333334, + "n_pred": 835.1666666666666, + "n_ref": 892.3125 + }, + "mean": { + "1": { + "Dice": 0.6629585499828491, + "FN": 54.0625, + "FP": 42.0, + "IoU": 0.6055302128032303, + "TN": 8082.5, + "TP": 621.4375, + "n_pred": 663.4375, + "n_ref": 675.5 + }, + "2": { + "Dice": 0.8343116635771188, + "FN": 116.875, + "FP": 87.0, + "IoU": 0.7367061389472968, + "TN": 7947.375, + "TP": 648.75, + "n_pred": 735.75, + "n_ref": 765.625 + }, + "3": { + "Dice": 0.8167998002898038, + "FN": 150.1875, + "FP": 20.6875, + "IoU": 0.7569703747694011, + "TN": 7543.5, + "TP": 1085.625, + "n_pred": 1106.3125, + "n_ref": 1235.8125 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9042113955408753, + "FN": 175, + "FP": 57, + "IoU": 0.8251695553880934, + "TN": 11473, + "TP": 1095, + "n_pred": 1152, + "n_ref": 1270 + }, + "2": { + "Dice": 0.9187562688064193, + "FN": 259, + "FP": 146, + "IoU": 0.849721706864564, + "TN": 10105, + "TP": 2290, + "n_pred": 2436, + "n_ref": 2549 + }, + "3": { + "Dice": 0.9867447064899294, + "FN": 85, + "FP": 69, + "IoU": 0.9738362215426436, + "TN": 6914, + "TP": 5732, + "n_pred": 5801, + "n_ref": 5817 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8323959505061868, + "FN": 170, + "FP": 128, + "IoU": 0.7129094412331407, + "TN": 11762, + "TP": 740, + "n_pred": 868, + "n_ref": 910 + }, + "3": { + "Dice": 0.9655632081759609, + "FN": 73, + "FP": 82, + "IoU": 0.9334192439862543, + "TN": 10472, + "TP": 2173, + "n_pred": 2255, + "n_ref": 2246 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6402116402116402, + "FN": 28, + "FP": 108, + "IoU": 0.4708171206225681, + "TN": 12543, + "TP": 121, + "n_pred": 229, + "n_ref": 149 + }, + "2": { + "Dice": 0.8518173345759553, + "FN": 148, + "FP": 329, + "IoU": 0.7418831168831169, + "TN": 10952, + "TP": 1371, + "n_pred": 1700, + "n_ref": 1519 + }, + "3": { + "Dice": 0.9764337851929092, + "FN": 64, + "FP": 49, + "IoU": 0.9539527302363489, + "TN": 10346, + "TP": 2341, + "n_pred": 2390, + "n_ref": 2405 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 88, + "FP": 0, + "IoU": 0.0, + "TN": 6312, + "TP": 0, + "n_pred": 0, + "n_ref": 88 + }, + "2": { + "Dice": 0.8588588588588588, + "FN": 7, + "FP": 40, + "IoU": 0.7526315789473684, + "TN": 6210, + "TP": 143, + "n_pred": 183, + "n_ref": 150 + }, + "3": { + "Dice": 0.943089430894309, + "FN": 0, + "FP": 7, + "IoU": 0.8923076923076924, + "TN": 6335, + "TP": 58, + "n_pred": 65, + "n_ref": 58 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.410459587955626, + "FN": 627, + "FP": 117, + "IoU": 0.25822532402791626, + "TN": 5397, + "TP": 259, + "n_pred": 376, + "n_ref": 886 + }, + "3": { + "Dice": 0.7131474103585658, + "FN": 1724, + "FP": 4, + "IoU": 0.5541795665634675, + "TN": 2524, + "TP": 2148, + "n_pred": 2152, + "n_ref": 3872 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8825214899713467, + "FN": 11, + "FP": 30, + "IoU": 0.7897435897435897, + "TN": 6205, + "TP": 154, + "n_pred": 184, + "n_ref": 165 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9121054734318818, + "FN": 90, + "FP": 350, + "IoU": 0.8384135145060595, + "TN": 10077, + "TP": 2283, + "n_pred": 2633, + "n_ref": 2373 + }, + "2": { + "Dice": 0.9368, + "FN": 76, + "FP": 240, + "IoU": 0.8811136192626035, + "TN": 10142, + "TP": 2342, + "n_pred": 2582, + "n_ref": 2418 + }, + "3": { + "Dice": 0.9186691312384473, + "FN": 164, + "FP": 12, + "IoU": 0.8495726495726496, + "TN": 11630, + "TP": 994, + "n_pred": 1006, + "n_ref": 1158 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 12, + "IoU": 0.0, + "TN": 6388, + "TP": 0, + "n_pred": 12, + "n_ref": 0 + }, + "2": { + "Dice": 0.8338930508912425, + "FN": 470, + "FP": 173, + "IoU": 0.715108551174125, + "TN": 4143, + "TP": 1614, + "n_pred": 1787, + "n_ref": 2084 + }, + "3": { + "Dice": 0.9675090252707581, + "FN": 142, + "FP": 83, + "IoU": 0.9370629370629371, + "TN": 2825, + "TP": 3350, + "n_pred": 3433, + "n_ref": 3492 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9584034623707622, + "FN": 131, + "FP": 42, + "IoU": 0.920129270544783, + "TN": 4234, + "TP": 1993, + "n_pred": 2035, + "n_ref": 2124 + }, + "2": { + "Dice": 0.9068627450980392, + "FN": 31, + "FP": 45, + "IoU": 0.8295964125560538, + "TN": 5954, + "TP": 370, + "n_pred": 415, + "n_ref": 401 + }, + "3": { + "Dice": 0.8216216216216217, + "FN": 33, + "FP": 0, + "IoU": 0.6972477064220184, + "TN": 6291, + "TP": 76, + "n_pred": 76, + "n_ref": 109 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.93209574987787, + "FN": 70, + "FP": 69, + "IoU": 0.8728270814272644, + "TN": 11707, + "TP": 954, + "n_pred": 1023, + "n_ref": 1024 + }, + "2": { + "Dice": 0.9107513491075135, + "FN": 71, + "FP": 144, + "IoU": 0.8361280487804879, + "TN": 11488, + "TP": 1097, + "n_pred": 1241, + "n_ref": 1168 + }, + "3": { + "Dice": 0.875219683655536, + "FN": 118, + "FP": 24, + "IoU": 0.778125, + "TN": 12160, + "TP": 498, + "n_pred": 522, + "n_ref": 616 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9566406784297634, + "FN": 283, + "FP": 34, + "IoU": 0.916885159937074, + "TN": 8986, + "TP": 3497, + "n_pred": 3531, + "n_ref": 3780 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 12799, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.7669622160784354, + "FN": 61.8125, + "FP": 80.5625, + "IoU": 0.6809913157171378, + "TN": 9029.3125, + "TP": 428.3125, + "n_pred": 508.875, + "n_ref": 490.125 + }, + "mean": { + "1": { + "Dice": 0.5244637939935745, + "FN": 90.75, + "FP": 119.1875, + "IoU": 0.4323673390398738, + "TN": 9119.3125, + "TP": 270.75, + "n_pred": 389.9375, + "n_ref": 361.5 + }, + "2": { + "Dice": 0.8531763546277112, + "FN": 74.875, + "FP": 68.0625, + "IoU": 0.7494908508664575, + "TN": 8958.625, + "TP": 498.4375, + "n_pred": 566.5, + "n_ref": 573.3125 + }, + "3": { + "Dice": 0.9232464996140205, + "FN": 19.8125, + "FP": 54.4375, + "IoU": 0.8611157572450818, + "TN": 9010.0, + "TP": 515.75, + "n_pred": 570.1875, + "n_ref": 535.5625 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8843626806833115, + "FN": 47, + "FP": 129, + "IoU": 0.7926972909305064, + "TN": 11951, + "TP": 673, + "n_pred": 802, + "n_ref": 720 + }, + "3": { + "Dice": 0.902638762511374, + "FN": 91, + "FP": 16, + "IoU": 0.8225538971807629, + "TN": 12197, + "TP": 496, + "n_pred": 512, + "n_ref": 587 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4327485380116959, + "FN": 97, + "FP": 0, + "IoU": 0.27611940298507465, + "TN": 6266, + "TP": 37, + "n_pred": 37, + "n_ref": 134 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.765409383624655, + "FN": 218, + "FP": 37, + "IoU": 0.6199701937406855, + "TN": 12129, + "TP": 416, + "n_pred": 453, + "n_ref": 634 + }, + "2": { + "Dice": 0.820215410107705, + "FN": 121, + "FP": 96, + "IoU": 0.6952247191011236, + "TN": 12088, + "TP": 495, + "n_pred": 591, + "n_ref": 616 + }, + "3": { + "Dice": 0.9791499599037691, + "FN": 41, + "FP": 11, + "IoU": 0.9591516103692066, + "TN": 11527, + "TP": 1221, + "n_pred": 1232, + "n_ref": 1262 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8529014844804319, + "FN": 870, + "FP": 2, + "IoU": 0.7435294117647059, + "TN": 9400, + "TP": 2528, + "n_pred": 2530, + "n_ref": 3398 + }, + "2": { + "Dice": 0.926829268292683, + "FN": 0, + "FP": 78, + "IoU": 0.8636363636363636, + "TN": 12228, + "TP": 494, + "n_pred": 572, + "n_ref": 494 + }, + "3": { + "Dice": 0.8682170542635659, + "FN": 34, + "FP": 0, + "IoU": 0.7671232876712328, + "TN": 12654, + "TP": 112, + "n_pred": 112, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9149261334691798, + "FN": 132, + "FP": 35, + "IoU": 0.8431924882629108, + "TN": 11735, + "TP": 898, + "n_pred": 933, + "n_ref": 1030 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 73, + "IoU": 0.0, + "TN": 19127, + "TP": 0, + "n_pred": 73, + "n_ref": 0 + }, + "2": { + "Dice": 0.9448035803083044, + "FN": 93, + "FP": 129, + "IoU": 0.8953817153628653, + "TN": 17078, + "TP": 1900, + "n_pred": 2029, + "n_ref": 1993 + }, + "3": { + "Dice": 0.9105527638190954, + "FN": 21, + "FP": 68, + "IoU": 0.8357933579335793, + "TN": 18658, + "TP": 453, + "n_pred": 521, + "n_ref": 474 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7737909516380655, + "FN": 80, + "FP": 65, + "IoU": 0.6310432569974554, + "TN": 12407, + "TP": 248, + "n_pred": 313, + "n_ref": 328 + }, + "2": { + "Dice": 0.6979166666666666, + "FN": 37, + "FP": 21, + "IoU": 0.536, + "TN": 12675, + "TP": 67, + "n_pred": 88, + "n_ref": 104 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7107438016528925, + "FN": 21, + "FP": 14, + "IoU": 0.5512820512820513, + "TN": 6322, + "TP": 43, + "n_pred": 57, + "n_ref": 64 + }, + "2": { + "Dice": 0.830622009569378, + "FN": 204, + "FP": 150, + "IoU": 0.7103109656301145, + "TN": 5178, + "TP": 868, + "n_pred": 1018, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9578651685393258, + "FN": 8, + "FP": 172, + "IoU": 0.9191374663072777, + "TN": 4174, + "TP": 2046, + "n_pred": 2218, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 6398, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "2": { + "Dice": 0.8699551569506726, + "FN": 7, + "FP": 109, + "IoU": 0.7698412698412699, + "TN": 5896, + "TP": 388, + "n_pred": 497, + "n_ref": 395 + }, + "3": { + "Dice": 0.9693513898788311, + "FN": 37, + "FP": 6, + "IoU": 0.9405255878284924, + "TN": 5677, + "TP": 680, + "n_pred": 686, + "n_ref": 717 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7941176470588235, + "FN": 34, + "FP": 50, + "IoU": 0.6585365853658537, + "TN": 6154, + "TP": 162, + "n_pred": 212, + "n_ref": 196 + }, + "2": { + "Dice": 0.8602150537634409, + "FN": 336, + "FP": 28, + "IoU": 0.7547169811320755, + "TN": 4916, + "TP": 1120, + "n_pred": 1148, + "n_ref": 1456 + }, + "3": { + "Dice": 0.92573402417962, + "FN": 28, + "FP": 15, + "IoU": 0.8617363344051447, + "TN": 6089, + "TP": 268, + "n_pred": 283, + "n_ref": 296 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8933333333333333, + "FN": 110, + "FP": 18, + "IoU": 0.8072289156626506, + "TN": 5736, + "TP": 536, + "n_pred": 554, + "n_ref": 646 + }, + "3": { + "Dice": 0.9414270500532481, + "FN": 14, + "FP": 41, + "IoU": 0.8893360160965795, + "TN": 5903, + "TP": 442, + "n_pred": 483, + "n_ref": 456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8748685594111462, + "FN": 138, + "FP": 100, + "IoU": 0.7775700934579439, + "TN": 5330, + "TP": 832, + "n_pred": 932, + "n_ref": 970 + }, + "3": { + "Dice": 0.9631528356296059, + "FN": 16, + "FP": 99, + "IoU": 0.9289245982694685, + "TN": 4782, + "TP": 1503, + "n_pred": 1602, + "n_ref": 1519 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1629, + "IoU": 0.0, + "TN": 4771, + "TP": 0, + "n_pred": 1629, + "n_ref": 0 + }, + "2": { + "Dice": 0.7818181818181819, + "FN": 105, + "FP": 231, + "IoU": 0.6417910447761194, + "TN": 5462, + "TP": 602, + "n_pred": 833, + "n_ref": 707 + }, + "3": { + "Dice": 0.8143759873617693, + "FN": 27, + "FP": 443, + "IoU": 0.6868754163890739, + "TN": 4899, + "TP": 1031, + "n_pred": 1474, + "n_ref": 1058 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.7470870361526512, + "FN": 94.5, + "FP": 122.60416666666667, + "IoU": 0.6742957937679126, + "TN": 8148.479166666667, + "TP": 834.4166666666666, + "n_pred": 957.0208333333334, + "n_ref": 928.9166666666666 + }, + "mean": { + "1": { + "Dice": 0.4435773317871333, + "FN": 95.4375, + "FP": 209.875, + "IoU": 0.3704805356829274, + "TN": 8434.6875, + "TP": 460.0, + "n_pred": 669.875, + "n_ref": 555.4375 + }, + "2": { + "Dice": 0.8383207818451341, + "FN": 126.3125, + "FP": 116.875, + "IoU": 0.7302453518196208, + "TN": 8236.25, + "TP": 720.5625, + "n_pred": 837.4375, + "n_ref": 846.875 + }, + "3": { + "Dice": 0.9593629948256859, + "FN": 61.75, + "FP": 41.0625, + "IoU": 0.9221614938011895, + "TN": 7774.5, + "TP": 1322.6875, + "n_pred": 1363.75, + "n_ref": 1384.4375 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6796230859835101, + "FN": 57, + "FP": 487, + "IoU": 0.5147190008920607, + "TN": 5279, + "TP": 577, + "n_pred": 1064, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8378672470076169, + "FN": 99, + "FP": 199, + "IoU": 0.7209737827715356, + "TN": 5332, + "TP": 770, + "n_pred": 969, + "n_ref": 869 + }, + "3": { + "Dice": 0.9601918465227818, + "FN": 163, + "FP": 3, + "IoU": 0.9234317343173432, + "TN": 4232, + "TP": 2002, + "n_pred": 2005, + "n_ref": 2165 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9425607679207307, + "FN": 4, + "FP": 367, + "IoU": 0.8913616398243045, + "TN": 2985, + "TP": 3044, + "n_pred": 3411, + "n_ref": 3048 + }, + "2": { + "Dice": 0.8909090909090909, + "FN": 225, + "FP": 3, + "IoU": 0.8032786885245902, + "TN": 5241, + "TP": 931, + "n_pred": 934, + "n_ref": 1156 + }, + "3": { + "Dice": 0.9686411149825784, + "FN": 0, + "FP": 72, + "IoU": 0.9391891891891891, + "TN": 5216, + "TP": 1112, + "n_pred": 1184, + "n_ref": 1112 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 486, + "IoU": 0.0, + "TN": 5914, + "TP": 0, + "n_pred": 486, + "n_ref": 0 + }, + "2": { + "Dice": 0.8060873834069711, + "FN": 59, + "FP": 336, + "IoU": 0.6751644736842105, + "TN": 5184, + "TP": 821, + "n_pred": 1157, + "n_ref": 880 + }, + "3": { + "Dice": 0.9767441860465116, + "FN": 123, + "FP": 18, + "IoU": 0.9545454545454546, + "TN": 3298, + "TP": 2961, + "n_pred": 2979, + "n_ref": 3084 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7205542725173211, + "FN": 42, + "FP": 200, + "IoU": 0.5631768953068592, + "TN": 12246, + "TP": 312, + "n_pred": 512, + "n_ref": 354 + }, + "2": { + "Dice": 0.8933817722318749, + "FN": 356, + "FP": 319, + "IoU": 0.8073080216956894, + "TN": 9297, + "TP": 2828, + "n_pred": 3147, + "n_ref": 3184 + }, + "3": { + "Dice": 0.9666159072273632, + "FN": 106, + "FP": 179, + "IoU": 0.935388800725459, + "TN": 8389, + "TP": 4126, + "n_pred": 4305, + "n_ref": 4232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 8, + "FP": 2, + "IoU": 0.0, + "TN": 6390, + "TP": 0, + "n_pred": 2, + "n_ref": 8 + }, + "2": { + "Dice": 0.9405684754521964, + "FN": 167, + "FP": 86, + "IoU": 0.8878048780487805, + "TN": 4145, + "TP": 2002, + "n_pred": 2088, + "n_ref": 2169 + }, + "3": { + "Dice": 0.971561438025398, + "FN": 75, + "FP": 84, + "IoU": 0.944695652173913, + "TN": 3525, + "TP": 2716, + "n_pred": 2800, + "n_ref": 2791 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 803, + "IoU": 0.0, + "TN": 11997, + "TP": 0, + "n_pred": 803, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8974507531865585, + "FN": 248, + "FP": 106, + "IoU": 0.813977929584866, + "TN": 17297, + "TP": 1549, + "n_pred": 1655, + "n_ref": 1797 + }, + "2": { + "Dice": 0.8609467455621301, + "FN": 289, + "FP": 181, + "IoU": 0.7558441558441559, + "TN": 17275, + "TP": 1455, + "n_pred": 1636, + "n_ref": 1744 + }, + "3": { + "Dice": 0.9472990777338604, + "FN": 151, + "FP": 9, + "IoU": 0.899874843554443, + "TN": 17602, + "TP": 1438, + "n_pred": 1447, + "n_ref": 1589 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3824175824175824, + "FN": 243, + "FP": 38, + "IoU": 0.23641304347826086, + "TN": 18832, + "TP": 87, + "n_pred": 125, + "n_ref": 330 + }, + "2": { + "Dice": 0.7420189818809318, + "FN": 390, + "FP": 507, + "IoU": 0.5898491083676269, + "TN": 17013, + "TP": 1290, + "n_pred": 1797, + "n_ref": 1680 + }, + "3": { + "Dice": 0.9589628419763169, + "FN": 157, + "FP": 245, + "IoU": 0.92116101196313, + "TN": 14101, + "TP": 4697, + "n_pred": 4942, + "n_ref": 4854 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.81316685584563, + "FN": 206, + "FP": 617, + "IoU": 0.6851568477429227, + "TN": 3786, + "TP": 1791, + "n_pred": 2408, + "n_ref": 1997 + }, + "2": { + "Dice": 0.9119617224880383, + "FN": 79, + "FP": 105, + "IoU": 0.8381706244503079, + "TN": 5263, + "TP": 953, + "n_pred": 1058, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9425867507886435, + "FN": 59, + "FP": 32, + "IoU": 0.8914081145584726, + "TN": 5562, + "TP": 747, + "n_pred": 779, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 719, + "FP": 252, + "IoU": 0.0, + "TN": 11829, + "TP": 0, + "n_pred": 252, + "n_ref": 719 + }, + "2": { + "Dice": 0.6611456176673568, + "FN": 357, + "FP": 134, + "IoU": 0.49381443298969074, + "TN": 11830, + "TP": 479, + "n_pred": 613, + "n_ref": 836 + }, + "3": { + "Dice": 0.9416637901277183, + "FN": 154, + "FP": 15, + "IoU": 0.8897586431833007, + "TN": 11267, + "TP": 1364, + "n_pred": 1379, + "n_ref": 1518 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.7870763977753049, + "FN": 125.66666666666667, + "FP": 73.54901960784314, + "IoU": 0.7176205862532633, + "TN": 8312.313725490196, + "TP": 900.235294117647, + "n_pred": 973.78431372549, + "n_ref": 1025.9019607843136 + }, + "mean": { + "1": { + "Dice": 0.623341815703486, + "FN": 231.05882352941177, + "FP": 30.823529411764707, + "IoU": 0.5430766015072763, + "TN": 8562.117647058823, + "TP": 587.7647058823529, + "n_pred": 618.5882352941177, + "n_ref": 818.8235294117648 + }, + "2": { + "Dice": 0.8898951747896429, + "FN": 114.94117647058823, + "FP": 82.6470588235294, + "IoU": 0.8037950946535339, + "TN": 8425.35294117647, + "TP": 788.8235294117648, + "n_pred": 871.4705882352941, + "n_ref": 903.7647058823529 + }, + "3": { + "Dice": 0.8479922028327859, + "FN": 31.0, + "FP": 107.17647058823529, + "IoU": 0.8059900625989797, + "TN": 7949.470588235294, + "TP": 1324.1176470588234, + "n_pred": 1431.2941176470588, + "n_ref": 1355.1176470588234 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.94548327627074, + "FN": 155, + "FP": 52, + "IoU": 0.8966033966033966, + "TN": 4398, + "TP": 1795, + "n_pred": 1847, + "n_ref": 1950 + }, + "2": { + "Dice": 0.9229406554472985, + "FN": 112, + "FP": 62, + "IoU": 0.8569078947368421, + "TN": 5184, + "TP": 1042, + "n_pred": 1104, + "n_ref": 1154 + }, + "3": { + "Dice": 0.9786460699681963, + "FN": 45, + "FP": 2, + "IoU": 0.958185053380783, + "TN": 5276, + "TP": 1077, + "n_pred": 1079, + "n_ref": 1122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.91995841995842, + "FN": 115, + "FP": 39, + "IoU": 0.8517805582290664, + "TN": 5361, + "TP": 885, + "n_pred": 924, + "n_ref": 1000 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4531138153185397, + "FN": 2996, + "FP": 60, + "IoU": 0.2929199444701527, + "TN": 14878, + "TP": 1266, + "n_pred": 1326, + "n_ref": 4262 + }, + "2": { + "Dice": 0.888434818144667, + "FN": 152, + "FP": 394, + "IoU": 0.799264705882353, + "TN": 16480, + "TP": 2174, + "n_pred": 2568, + "n_ref": 2326 + }, + "3": { + "Dice": 0.9772741045997212, + "FN": 259, + "FP": 116, + "IoU": 0.955558189144347, + "TN": 10762, + "TP": 8063, + "n_pred": 8179, + "n_ref": 8322 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4791666666666667, + "FN": 49, + "FP": 1, + "IoU": 0.3150684931506849, + "TN": 6327, + "TP": 23, + "n_pred": 24, + "n_ref": 72 + }, + "2": { + "Dice": 0.9109947643979057, + "FN": 11, + "FP": 74, + "IoU": 0.8365384615384616, + "TN": 5880, + "TP": 435, + "n_pred": 509, + "n_ref": 446 + }, + "3": { + "Dice": 0.9568965517241379, + "FN": 18, + "FP": 2, + "IoU": 0.9173553719008265, + "TN": 6158, + "TP": 222, + "n_pred": 224, + "n_ref": 240 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 12, + "FP": 0, + "IoU": 0.0, + "TN": 19188, + "TP": 0, + "n_pred": 0, + "n_ref": 12 + }, + "2": { + "Dice": 0.8871287128712871, + "FN": 17, + "FP": 97, + "IoU": 0.797153024911032, + "TN": 18638, + "TP": 448, + "n_pred": 545, + "n_ref": 465 + }, + "3": { + "Dice": 0.012403100775193798, + "FN": 0, + "FP": 637, + "IoU": 0.0062402496099844, + "TN": 18559, + "TP": 4, + "n_pred": 641, + "n_ref": 4 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8314176245210728, + "FN": 52, + "FP": 36, + "IoU": 0.7114754098360656, + "TN": 12495, + "TP": 217, + "n_pred": 253, + "n_ref": 269 + }, + "2": { + "Dice": 0.9105691056910569, + "FN": 268, + "FP": 29, + "IoU": 0.835820895522388, + "TN": 10991, + "TP": 1512, + "n_pred": 1541, + "n_ref": 1780 + }, + "3": { + "Dice": 0.9710532717100462, + "FN": 19, + "FP": 100, + "IoU": 0.9437352245862884, + "TN": 10685, + "TP": 1996, + "n_pred": 2096, + "n_ref": 2015 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 47, + "IoU": 0.0, + "TN": 6353, + "TP": 0, + "n_pred": 47, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6666666666666666, + "FN": 6, + "FP": 0, + "IoU": 0.5, + "TN": 12788, + "TP": 6, + "n_pred": 6, + "n_ref": 12 + }, + "2": { + "Dice": 0.9005886200130805, + "FN": 137, + "FP": 167, + "IoU": 0.819155264723379, + "TN": 11119, + "TP": 1377, + "n_pred": 1544, + "n_ref": 1514 + }, + "3": { + "Dice": 0.9716265973575915, + "FN": 49, + "FP": 82, + "IoU": 0.9448188711036226, + "TN": 10426, + "TP": 2243, + "n_pred": 2325, + "n_ref": 2292 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8912429378531074, + "FN": 67, + "FP": 87, + "IoU": 0.8038216560509555, + "TN": 5615, + "TP": 631, + "n_pred": 718, + "n_ref": 698 + }, + "2": { + "Dice": 0.9127872716558633, + "FN": 274, + "FP": 22, + "IoU": 0.8395663956639566, + "TN": 4555, + "TP": 1549, + "n_pred": 1571, + "n_ref": 1823 + }, + "3": { + "Dice": 0.9684990735021618, + "FN": 14, + "FP": 37, + "IoU": 0.9389221556886228, + "TN": 5565, + "TP": 784, + "n_pred": 821, + "n_ref": 798 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7058823529411765, + "FN": 6, + "FP": 9, + "IoU": 0.5454545454545454, + "TN": 6367, + "TP": 18, + "n_pred": 27, + "n_ref": 24 + }, + "2": { + "Dice": 0.9125266686985675, + "FN": 191, + "FP": 96, + "IoU": 0.8391255605381166, + "TN": 4616, + "TP": 1497, + "n_pred": 1593, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9740874267688148, + "FN": 85, + "FP": 145, + "IoU": 0.9494838567977157, + "TN": 1847, + "TP": 4323, + "n_pred": 4468, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9271383315733897, + "FN": 110, + "FP": 28, + "IoU": 0.8641732283464567, + "TN": 5384, + "TP": 878, + "n_pred": 906, + "n_ref": 988 + }, + "2": { + "Dice": 0.9071818563628727, + "FN": 138, + "FP": 83, + "IoU": 0.830130668716372, + "TN": 5099, + "TP": 1080, + "n_pred": 1163, + "n_ref": 1218 + }, + "3": { + "Dice": 0.9688726131310489, + "FN": 10, + "FP": 109, + "IoU": 0.9396245560629122, + "TN": 4429, + "TP": 1852, + "n_pred": 1961, + "n_ref": 1862 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 94, + "IoU": 0.0, + "TN": 6306, + "TP": 0, + "n_pred": 94, + "n_ref": 0 + }, + "2": { + "Dice": 0.7849355797819624, + "FN": 388, + "FP": 46, + "IoU": 0.6460032626427407, + "TN": 5174, + "TP": 792, + "n_pred": 838, + "n_ref": 1180 + }, + "3": { + "Dice": 0.6258205689277899, + "FN": 0, + "FP": 342, + "IoU": 0.4554140127388535, + "TN": 5772, + "TP": 286, + "n_pred": 628, + "n_ref": 286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9504107088530575, + "FN": 312, + "FP": 14, + "IoU": 0.9055072463768116, + "TN": 9350, + "TP": 3124, + "n_pred": 3138, + "n_ref": 3436 + }, + "2": { + "Dice": 0.9128630705394191, + "FN": 2, + "FP": 19, + "IoU": 0.8396946564885496, + "TN": 12669, + "TP": 110, + "n_pred": 129, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9563046192259675, + "FN": 48, + "FP": 57, + "IoU": 0.916267942583732, + "TN": 5146, + "TP": 1149, + "n_pred": 1206, + "n_ref": 1197 + }, + "2": { + "Dice": 0.827790973871734, + "FN": 264, + "FP": 316, + "IoU": 0.7061803444782169, + "TN": 4426, + "TP": 1394, + "n_pred": 1710, + "n_ref": 1658 + }, + "3": { + "Dice": 0.9227348526959422, + "FN": 28, + "FP": 250, + "IoU": 0.8565531475748194, + "TN": 4462, + "TP": 1660, + "n_pred": 1910, + "n_ref": 1688 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.6466324078170995, + "FN": 105.07843137254902, + "FP": 67.66666666666667, + "IoU": 0.5699005852381815, + "TN": 9042.098039215685, + "TP": 573.3921568627451, + "n_pred": 641.0588235294117, + "n_ref": 678.4705882352941 + }, + "mean": { + "1": { + "Dice": 0.5153221069777657, + "FN": 85.52941176470588, + "FP": 98.76470588235294, + "IoU": 0.44170153561309444, + "TN": 9112.470588235294, + "TP": 491.47058823529414, + "n_pred": 590.2352941176471, + "n_ref": 577.0 + }, + "2": { + "Dice": 0.6850190574850225, + "FN": 176.1764705882353, + "FP": 66.58823529411765, + "IoU": 0.5840575061717991, + "TN": 8906.70588235294, + "TP": 638.7647058823529, + "n_pred": 705.3529411764706, + "n_ref": 814.9411764705883 + }, + "3": { + "Dice": 0.7395560589885105, + "FN": 53.529411764705884, + "FP": 37.64705882352941, + "IoU": 0.683942713929651, + "TN": 9107.117647058823, + "TP": 589.9411764705883, + "n_pred": 627.5882352941177, + "n_ref": 643.4705882352941 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 50, + "IoU": 0.0, + "TN": 12750, + "TP": 0, + "n_pred": 50, + "n_ref": 0 + }, + "2": { + "Dice": 0.8277830637488106, + "FN": 122, + "FP": 59, + "IoU": 0.7061688311688312, + "TN": 12184, + "TP": 435, + "n_pred": 494, + "n_ref": 557 + }, + "3": { + "Dice": 0.8586118251928021, + "FN": 55, + "FP": 0, + "IoU": 0.7522522522522522, + "TN": 12578, + "TP": 167, + "n_pred": 167, + "n_ref": 222 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.43731778425655976, + "FN": 193, + "FP": 0, + "IoU": 0.2798507462686567, + "TN": 6132, + "TP": 75, + "n_pred": 75, + "n_ref": 268 + }, + "2": { + "Dice": 0.7704972011853803, + "FN": 464, + "FP": 233, + "IoU": 0.626673808248527, + "TN": 4533, + "TP": 1170, + "n_pred": 1403, + "n_ref": 1634 + }, + "3": { + "Dice": 0.9352088661551577, + "FN": 139, + "FP": 13, + "IoU": 0.8783026421136909, + "TN": 5151, + "TP": 1097, + "n_pred": 1110, + "n_ref": 1236 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 44, + "IoU": 0.0, + "TN": 38356, + "TP": 0, + "n_pred": 44, + "n_ref": 0 + }, + "2": { + "Dice": 0.6574074074074074, + "FN": 319, + "FP": 199, + "IoU": 0.4896551724137931, + "TN": 37385, + "TP": 497, + "n_pred": 696, + "n_ref": 816 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 42, + "IoU": 0.0, + "TN": 38358, + "TP": 0, + "n_pred": 42, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5723404255319149, + "FN": 48, + "FP": 354, + "IoU": 0.4008941877794337, + "TN": 12129, + "TP": 269, + "n_pred": 623, + "n_ref": 317 + }, + "2": { + "Dice": 0.8605093120486507, + "FN": 983, + "FP": 118, + "IoU": 0.7551701134089392, + "TN": 8303, + "TP": 3396, + "n_pred": 3514, + "n_ref": 4379 + }, + "3": { + "Dice": 0.7088803088803088, + "FN": 54, + "FP": 323, + "IoU": 0.5490430622009569, + "TN": 11964, + "TP": 459, + "n_pred": 782, + "n_ref": 513 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.07111111111111111, + "FN": 202, + "FP": 7, + "IoU": 0.03686635944700461, + "TN": 6183, + "TP": 8, + "n_pred": 15, + "n_ref": 210 + }, + "2": { + "Dice": 0.7424812030075187, + "FN": 202, + "FP": 72, + "IoU": 0.5904334828101644, + "TN": 5731, + "TP": 395, + "n_pred": 467, + "n_ref": 597 + }, + "3": { + "Dice": 0.9380134428678119, + "FN": 75, + "FP": 8, + "IoU": 0.8832630098452883, + "TN": 5689, + "TP": 628, + "n_pred": 636, + "n_ref": 703 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9098712446351931, + "FN": 491, + "FP": 76, + "IoU": 0.8346456692913385, + "TN": 9371, + "TP": 2862, + "n_pred": 2938, + "n_ref": 3353 + }, + "2": { + "Dice": 0.9035997559487492, + "FN": 159, + "FP": 157, + "IoU": 0.8241513633834168, + "TN": 11003, + "TP": 1481, + "n_pred": 1638, + "n_ref": 1640 + }, + "3": { + "Dice": 0.9716088328075709, + "FN": 15, + "FP": 102, + "IoU": 0.9447852760736196, + "TN": 10681, + "TP": 2002, + "n_pred": 2104, + "n_ref": 2017 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8869876641464385, + "FN": 40, + "FP": 528, + "IoU": 0.7969252770825885, + "TN": 3603, + "TP": 2229, + "n_pred": 2757, + "n_ref": 2269 + }, + "2": { + "Dice": 0.9365495542737283, + "FN": 86, + "FP": 35, + "IoU": 0.8806706114398422, + "TN": 5386, + "TP": 893, + "n_pred": 928, + "n_ref": 979 + }, + "3": { + "Dice": 0.9735099337748344, + "FN": 12, + "FP": 12, + "IoU": 0.9483870967741935, + "TN": 5935, + "TP": 441, + "n_pred": 453, + "n_ref": 453 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5259515570934256, + "FN": 226, + "FP": 459, + "IoU": 0.3568075117370892, + "TN": 5335, + "TP": 380, + "n_pred": 839, + "n_ref": 606 + }, + "2": { + "Dice": 0.650887573964497, + "FN": 267, + "FP": 28, + "IoU": 0.4824561403508772, + "TN": 5830, + "TP": 275, + "n_pred": 303, + "n_ref": 542 + }, + "3": { + "Dice": 0.8010269576379975, + "FN": 419, + "FP": 46, + "IoU": 0.6680942184154176, + "TN": 4999, + "TP": 936, + "n_pred": 982, + "n_ref": 1355 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9647191645498165, + "FN": 43, + "FP": 82, + "IoU": 0.9318429661941112, + "TN": 4566, + "TP": 1709, + "n_pred": 1791, + "n_ref": 1752 + }, + "2": { + "Dice": 0.919646017699115, + "FN": 161, + "FP": 66, + "IoU": 0.8512450851900393, + "TN": 4874, + "TP": 1299, + "n_pred": 1365, + "n_ref": 1460 + }, + "3": { + "Dice": 0.9798065501442389, + "FN": 25, + "FP": 94, + "IoU": 0.9604125083166999, + "TN": 3394, + "TP": 2887, + "n_pred": 2981, + "n_ref": 2912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9178193653376729, + "FN": 38, + "FP": 63, + "IoU": 0.8481203007518797, + "TN": 12135, + "TP": 564, + "n_pred": 627, + "n_ref": 602 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 12797, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8977469670710572, + "FN": 43, + "FP": 16, + "IoU": 0.8144654088050315, + "TN": 6082, + "TP": 259, + "n_pred": 275, + "n_ref": 302 + }, + "2": { + "Dice": 0.8480078701426463, + "FN": 188, + "FP": 121, + "IoU": 0.7361229718189581, + "TN": 5229, + "TP": 862, + "n_pred": 983, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9684499314128944, + "FN": 92, + "FP": 0, + "IoU": 0.9388297872340425, + "TN": 4896, + "TP": 1412, + "n_pred": 1412, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 130, + "FP": 0, + "IoU": 0.0, + "TN": 6270, + "TP": 0, + "n_pred": 0, + "n_ref": 130 + }, + "2": { + "Dice": 0.7878787878787878, + "FN": 44, + "FP": 40, + "IoU": 0.65, + "TN": 6160, + "TP": 156, + "n_pred": 196, + "n_ref": 200 + }, + "3": { + "Dice": 0.0, + "FN": 24, + "FP": 0, + "IoU": 0.0, + "TN": 6376, + "TP": 0, + "n_pred": 0, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 6399, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3241643/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.7438229458213497, + "FN": 98.81985294117648, + "FP": 78.85563725490196, + "IoU": 0.6685087712966277, + "TN": 8477.999019607843, + "TP": 704.3254901960784, + "n_pred": 783.1811274509803, + "n_ref": 803.1453431372548 + }, + "mean": { + "1": { + "Dice": 0.5539327196889616, + "FN": 111.36764705882354, + "FP": 100.13014705882352, + "IoU": 0.47863124492928044, + "TN": 8662.217647058824, + "TP": 486.2845588235294, + "n_pred": 586.414705882353, + "n_ref": 597.652205882353 + }, + "2": { + "Dice": 0.8201446064649259, + "FN": 121.83602941176471, + "FP": 84.23455882352941, + "IoU": 0.7208589884917416, + "TN": 8494.861764705882, + "TP": 659.0676470588236, + "n_pred": 743.302205882353, + "n_ref": 780.9036764705883 + }, + "3": { + "Dice": 0.8573915113101613, + "FN": 63.25588235294117, + "FP": 52.20220588235294, + "IoU": 0.8060360804688607, + "TN": 8276.917647058825, + "TP": 967.6242647058823, + "n_pred": 1019.8264705882353, + "n_ref": 1030.8801470588235 + } + } + } +} \ No newline at end of file diff --git a/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_004/summary.json b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_004/summary.json new file mode 100644 index 0000000000000000000000000000000000000000..dfca9d5687182e48294de63e773751045a6dcfe8 --- /dev/null +++ b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_004/summary.json @@ -0,0 +1,1846 @@ +{ + "foreground_mean": { + "Dice": 0.8638621081429777, + "FN": 1306.86, + "FP": 1048.28, + "IoU": 0.7693837691804624, + "TN": 843186.2466666667, + "TP": 8887.253333333334, + "n_pred": 9935.533333333333, + "n_ref": 10194.113333333333 + }, + "mean": { + "1": { + "Dice": 0.827597931752716, + "FN": 1847.24, + "FP": 1072.96, + "IoU": 0.7138380284641367, + "TN": 843501.62, + "TP": 8006.82, + "n_pred": 9079.78, + "n_ref": 9854.06 + }, + "2": { + "Dice": 0.8462452422737852, + "FN": 1432.42, + "FP": 1351.16, + "IoU": 0.7400360758194927, + "TN": 843021.98, + "TP": 8623.08, + "n_pred": 9974.24, + "n_ref": 10055.5 + }, + "3": { + "Dice": 0.9177431504024318, + "FN": 640.92, + "FP": 720.72, + "IoU": 0.8542772032577577, + "TN": 843035.14, + "TP": 10031.86, + "n_pred": 10752.58, + "n_ref": 10672.78 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.8664397775379763, + "FN": 1008, + "FP": 2210, + "IoU": 0.7643526654950205, + "TN": 1092264, + "TP": 10438, + "n_pred": 12648, + "n_ref": 11446 + }, + "2": { + "Dice": 0.8619385017541445, + "FN": 926, + "FP": 3088, + "IoU": 0.7573742746615088, + "TN": 1089376, + "TP": 12530, + "n_pred": 15618, + "n_ref": 13456 + }, + "3": { + "Dice": 0.9435041811707278, + "FN": 627, + "FP": 2197, + "IoU": 0.8930505586063245, + "TN": 1079515, + "TP": 23581, + "n_pred": 25778, + "n_ref": 24208 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient001_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient001_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8300395256916996, + "FN": 48, + "FP": 1930, + "IoU": 0.7094594594594594, + "TN": 1099112, + "TP": 4830, + "n_pred": 6760, + "n_ref": 4878 + }, + "2": { + "Dice": 0.8839566805188264, + "FN": 1941, + "FP": 1745, + "IoU": 0.7920451339915374, + "TN": 1088195, + "TP": 14039, + "n_pred": 15784, + "n_ref": 15980 + }, + "3": { + "Dice": 0.9235134786534245, + "FN": 582, + "FP": 2383, + "IoU": 0.857895998082914, + "TN": 1085055, + "TP": 17900, + "n_pred": 20283, + "n_ref": 18482 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient001_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient001_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8067924039147061, + "FN": 2646, + "FP": 335, + "IoU": 0.6761542639869637, + "TN": 900235, + "TP": 6224, + "n_pred": 6559, + "n_ref": 8870 + }, + "2": { + "Dice": 0.893855986995234, + "FN": 1689, + "FP": 1184, + "IoU": 0.8080828323313293, + "TN": 894470, + "TP": 12097, + "n_pred": 13281, + "n_ref": 13786 + }, + "3": { + "Dice": 0.9708829201749847, + "FN": 772, + "FP": 466, + "IoU": 0.9434134747234665, + "TN": 887562, + "TP": 20640, + "n_pred": 21106, + "n_ref": 21412 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient004_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient004_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7499366607550038, + "FN": 2538, + "FP": 423, + "IoU": 0.5999189298743413, + "TN": 902039, + "TP": 4440, + "n_pred": 4863, + "n_ref": 6978 + }, + "2": { + "Dice": 0.8962589176961893, + "FN": 1447, + "FP": 1534, + "IoU": 0.8120191701349476, + "TN": 893582, + "TP": 12877, + "n_pred": 14411, + "n_ref": 14324 + }, + "3": { + "Dice": 0.9679490667682429, + "FN": 846, + "FP": 332, + "IoU": 0.9378888537382685, + "TN": 890474, + "TP": 17788, + "n_pred": 18120, + "n_ref": 18634 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient004_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient004_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9255053420373208, + "FN": 2132, + "FP": 1417, + "IoU": 0.8613401054893534, + "TN": 1400165, + "TP": 22046, + "n_pred": 23463, + "n_ref": 24178 + }, + "2": { + "Dice": 0.8841926752111665, + "FN": 1528, + "FP": 2023, + "IoU": 0.792424153855147, + "TN": 1408653, + "TP": 13556, + "n_pred": 15579, + "n_ref": 15084 + }, + "3": { + "Dice": 0.9742381401193843, + "FN": 468, + "FP": 844, + "IoU": 0.9497702909647779, + "TN": 1399640, + "TP": 24808, + "n_pred": 25652, + "n_ref": 25276 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient007_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient007_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8759931286235774, + "FN": 1232, + "FP": 3388, + "IoU": 0.7793485528703792, + "TN": 1404822, + "TP": 16318, + "n_pred": 19706, + "n_ref": 17550 + }, + "2": { + "Dice": 0.8826920585568079, + "FN": 1441, + "FP": 2181, + "IoU": 0.7900168125688446, + "TN": 1408511, + "TP": 13627, + "n_pred": 15808, + "n_ref": 15068 + }, + "3": { + "Dice": 0.9703764068453626, + "FN": 671, + "FP": 674, + "IoU": 0.9424574313339608, + "TN": 1402386, + "TP": 22029, + "n_pred": 22703, + "n_ref": 22700 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient007_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient007_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8670294569975157, + "FN": 1929, + "FP": 319, + "IoU": 0.7652709616790226, + "TN": 752471, + "TP": 7329, + "n_pred": 7648, + "n_ref": 9258 + }, + "2": { + "Dice": 0.8748615725359912, + "FN": 1115, + "FP": 1258, + "IoU": 0.7775590551181102, + "TN": 751380, + "TP": 8295, + "n_pred": 9553, + "n_ref": 9410 + }, + "3": { + "Dice": 0.9722508349720635, + "FN": 442, + "FP": 447, + "IoU": 0.946000121484541, + "TN": 745585, + "TP": 15574, + "n_pred": 16021, + "n_ref": 16016 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient015_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient015_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8048054215011808, + "FN": 999, + "FP": 902, + "IoU": 0.6733676975945018, + "TN": 756228, + "TP": 3919, + "n_pred": 4821, + "n_ref": 4918 + }, + "2": { + "Dice": 0.8327134045859033, + "FN": 2395, + "FP": 1158, + "IoU": 0.7133752823491449, + "TN": 749652, + "TP": 8843, + "n_pred": 10001, + "n_ref": 11238 + }, + "3": { + "Dice": 0.9518949801561342, + "FN": 999, + "FP": 104, + "IoU": 0.9082057256990679, + "TN": 750032, + "TP": 10913, + "n_pred": 11017, + "n_ref": 11912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient015_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient015_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7196870925684485, + "FN": 5840, + "FP": 395, + "IoU": 0.5621181262729125, + "TN": 1064033, + "TP": 8004, + "n_pred": 8399, + "n_ref": 13844 + }, + "2": { + "Dice": 0.7467215468555566, + "FN": 2069, + "FP": 3223, + "IoU": 0.5958145573970824, + "TN": 1065179, + "TP": 7801, + "n_pred": 11024, + "n_ref": 9870 + }, + "3": { + "Dice": 0.8533177036739982, + "FN": 4573, + "FP": 182, + "IoU": 0.7441622726783601, + "TN": 1059686, + "TP": 13831, + "n_pred": 14013, + "n_ref": 18404 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient020_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient020_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7507207908104893, + "FN": 5094, + "FP": 353, + "IoU": 0.6009231445527144, + "TN": 1064623, + "TP": 8202, + "n_pred": 8555, + "n_ref": 13296 + }, + "2": { + "Dice": 0.7590799031476998, + "FN": 2649, + "FP": 2525, + "IoU": 0.6117073170731707, + "TN": 1064947, + "TP": 8151, + "n_pred": 10676, + "n_ref": 10800 + }, + "3": { + "Dice": 0.8477159238024783, + "FN": 3767, + "FP": 350, + "IoU": 0.735683102208526, + "TN": 1062696, + "TP": 11459, + "n_pred": 11809, + "n_ref": 15226 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient020_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient020_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8724240619416319, + "FN": 1808, + "FP": 334, + "IoU": 0.7737164589055567, + "TN": 1096454, + "TP": 7324, + "n_pred": 7658, + "n_ref": 9132 + }, + "2": { + "Dice": 0.8493161903202031, + "FN": 1111, + "FP": 2569, + "IoU": 0.7380969326026617, + "TN": 1091869, + "TP": 10371, + "n_pred": 12940, + "n_ref": 11482 + }, + "3": { + "Dice": 0.9048663236906469, + "FN": 767, + "FP": 1489, + "IoU": 0.8262610704659222, + "TN": 1092935, + "TP": 10729, + "n_pred": 12218, + "n_ref": 11496 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient033_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient033_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8454088952654233, + "FN": 695, + "FP": 167, + "IoU": 0.7322149735942839, + "TN": 1102701, + "TP": 2357, + "n_pred": 2524, + "n_ref": 3052 + }, + "2": { + "Dice": 0.8599923283467588, + "FN": 1142, + "FP": 2508, + "IoU": 0.7543741588156124, + "TN": 1091060, + "TP": 11210, + "n_pred": 13718, + "n_ref": 12352 + }, + "3": { + "Dice": 0.7699421965317919, + "FN": 283, + "FP": 1508, + "IoU": 0.6259398496240601, + "TN": 1101132, + "TP": 2997, + "n_pred": 4505, + "n_ref": 3280 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient033_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient033_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8754228391461565, + "FN": 1659, + "FP": 477, + "IoU": 0.7784462192718598, + "TN": 1137239, + "TP": 7505, + "n_pred": 7982, + "n_ref": 9164 + }, + "2": { + "Dice": 0.8991912340203496, + "FN": 2183, + "FP": 1681, + "IoU": 0.8168459970611935, + "TN": 1125783, + "TP": 17233, + "n_pred": 18914, + "n_ref": 19416 + }, + "3": { + "Dice": 0.9403569873748368, + "FN": 1130, + "FP": 240, + "IoU": 0.8874281018898932, + "TN": 1134710, + "TP": 10800, + "n_pred": 11040, + "n_ref": 11930 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient034_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient034_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6735576923076924, + "FN": 1065, + "FP": 293, + "IoU": 0.5077926785067053, + "TN": 1144121, + "TP": 1401, + "n_pred": 1694, + "n_ref": 2466 + }, + "2": { + "Dice": 0.8498842266992708, + "FN": 4799, + "FP": 2138, + "IoU": 0.7389553699104388, + "TN": 1120306, + "TP": 19637, + "n_pred": 21775, + "n_ref": 24436 + }, + "3": { + "Dice": 0.5967471896675437, + "FN": 221, + "FP": 3151, + "IoU": 0.42525992841315835, + "TN": 1141013, + "TP": 2495, + "n_pred": 5646, + "n_ref": 2716 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient034_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient034_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9282267263314907, + "FN": 1267, + "FP": 369, + "IoU": 0.8660663119115841, + "TN": 788585, + "TP": 10579, + "n_pred": 10948, + "n_ref": 11846 + }, + "2": { + "Dice": 0.8854017524769486, + "FN": 904, + "FP": 1097, + "IoU": 0.7943685129996917, + "TN": 791069, + "TP": 7730, + "n_pred": 8827, + "n_ref": 8634 + }, + "3": { + "Dice": 0.9547212470994229, + "FN": 630, + "FP": 131, + "IoU": 0.9133652094717668, + "TN": 792016, + "TP": 8023, + "n_pred": 8154, + "n_ref": 8653 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient035_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient035_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7092953222244529, + "FN": 406, + "FP": 2490, + "IoU": 0.5495411417016643, + "TN": 794371, + "TP": 3533, + "n_pred": 6023, + "n_ref": 3939 + }, + "2": { + "Dice": 0.8819770640260675, + "FN": 2231, + "FP": 558, + "IoU": 0.7888720666161998, + "TN": 787590, + "TP": 10421, + "n_pred": 10979, + "n_ref": 12652 + }, + "3": { + "Dice": 0.8547361729179911, + "FN": 157, + "FP": 757, + "IoU": 0.7463225090202609, + "TN": 797197, + "TP": 2689, + "n_pred": 3446, + "n_ref": 2846 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient035_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient035_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9493728065603392, + "FN": 531, + "FP": 926, + "IoU": 0.903624818097632, + "TN": 1332722, + "TP": 13661, + "n_pred": 14587, + "n_ref": 14192 + }, + "2": { + "Dice": 0.8945120252576841, + "FN": 973, + "FP": 1299, + "IoU": 0.8091558168836623, + "TN": 1335935, + "TP": 9633, + "n_pred": 10932, + "n_ref": 10606 + }, + "3": { + "Dice": 0.9754226042808516, + "FN": 421, + "FP": 431, + "IoU": 0.9520243256940143, + "TN": 1330081, + "TP": 16907, + "n_pred": 17338, + "n_ref": 17328 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient042_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient042_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7462527479848111, + "FN": 267, + "FP": 3542, + "IoU": 0.5952178533475027, + "TN": 1338430, + "TP": 5601, + "n_pred": 9143, + "n_ref": 5868 + }, + "2": { + "Dice": 0.8763846928499497, + "FN": 1671, + "FP": 1275, + "IoU": 0.7799686309657181, + "TN": 1334451, + "TP": 10443, + "n_pred": 11718, + "n_ref": 12114 + }, + "3": { + "Dice": 0.9589346122553848, + "FN": 421, + "FP": 538, + "IoU": 0.9211089174070418, + "TN": 1335684, + "TP": 11197, + "n_pred": 11735, + "n_ref": 11618 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient042_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient042_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8900981996726678, + "FN": 1585, + "FP": 1101, + "IoU": 0.8019612180196122, + "TN": 838405, + "TP": 10877, + "n_pred": 11978, + "n_ref": 12462 + }, + "2": { + "Dice": 0.845764985040751, + "FN": 1250, + "FP": 1740, + "IoU": 0.7327493743296389, + "TN": 840780, + "TP": 8198, + "n_pred": 9938, + "n_ref": 9448 + }, + "3": { + "Dice": 0.9669536695366954, + "FN": 800, + "FP": 409, + "IoU": 0.9360215907286871, + "TN": 833071, + "TP": 17688, + "n_pred": 18097, + "n_ref": 18488 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient045_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient045_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8628007771633538, + "FN": 1165, + "FP": 671, + "IoU": 0.7587067945853594, + "TN": 844359, + "TP": 5773, + "n_pred": 6444, + "n_ref": 6938 + }, + "2": { + "Dice": 0.8537738013305805, + "FN": 1988, + "FP": 1199, + "IoU": 0.7448562965335042, + "TN": 839477, + "TP": 9304, + "n_pred": 10503, + "n_ref": 11292 + }, + "3": { + "Dice": 0.942005165531815, + "FN": 960, + "FP": 522, + "IoU": 0.8903683976919663, + "TN": 838450, + "TP": 12036, + "n_pred": 12558, + "n_ref": 12996 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient045_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient045_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8050375866445377, + "FN": 1733, + "FP": 264, + "IoU": 0.6736928104575164, + "TN": 845848, + "TP": 4123, + "n_pred": 4387, + "n_ref": 5856 + }, + "2": { + "Dice": 0.845728619872718, + "FN": 1617, + "FP": 1704, + "IoU": 0.7326947842884739, + "TN": 839544, + "TP": 9103, + "n_pred": 10807, + "n_ref": 10720 + }, + "3": { + "Dice": 0.9141223745805543, + "FN": 1923, + "FP": 150, + "IoU": 0.8418281703036777, + "TN": 838862, + "TP": 11033, + "n_pred": 11183, + "n_ref": 12956 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient048_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient048_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7882072404075439, + "FN": 286, + "FP": 691, + "IoU": 0.6504472271914132, + "TN": 849173, + "TP": 1818, + "n_pred": 2509, + "n_ref": 2104 + }, + "2": { + "Dice": 0.8822924803683756, + "FN": 1856, + "FP": 1007, + "IoU": 0.7893768851614802, + "TN": 838375, + "TP": 10730, + "n_pred": 11737, + "n_ref": 12586 + }, + "3": { + "Dice": 0.9265516836794556, + "FN": 849, + "FP": 403, + "IoU": 0.8631544431085365, + "TN": 842819, + "TP": 7897, + "n_pred": 8300, + "n_ref": 8746 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient048_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient048_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7966040462427746, + "FN": 4268, + "FP": 236, + "IoU": 0.6619633743620534, + "TN": 783716, + "TP": 8820, + "n_pred": 9056, + "n_ref": 13088 + }, + "2": { + "Dice": 0.8233757753836108, + "FN": 1288, + "FP": 1958, + "IoU": 0.6997780244173141, + "TN": 786228, + "TP": 7566, + "n_pred": 9524, + "n_ref": 8854 + }, + "3": { + "Dice": 0.9481673595484191, + "FN": 1028, + "FP": 331, + "IoU": 0.9014431793458554, + "TN": 783251, + "TP": 12430, + "n_pred": 12761, + "n_ref": 13458 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient052_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient052_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8495549394425799, + "FN": 1846, + "FP": 216, + "IoU": 0.7384576357179097, + "TN": 789156, + "TP": 5822, + "n_pred": 6038, + "n_ref": 7668 + }, + "2": { + "Dice": 0.8384215991692627, + "FN": 1548, + "FP": 1564, + "IoU": 0.721795101019131, + "TN": 785854, + "TP": 8074, + "n_pred": 9638, + "n_ref": 9622 + }, + "3": { + "Dice": 0.9402891976183726, + "FN": 741, + "FP": 312, + "IoU": 0.8873073630136986, + "TN": 787696, + "TP": 8291, + "n_pred": 8603, + "n_ref": 9032 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient052_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient052_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9005097845749055, + "FN": 1516, + "FP": 904, + "IoU": 0.8190248279988035, + "TN": 883298, + "TP": 10952, + "n_pred": 11856, + "n_ref": 12468 + }, + "2": { + "Dice": 0.8521256931608133, + "FN": 1579, + "FP": 1461, + "IoU": 0.7423510466988728, + "TN": 884871, + "TP": 8759, + "n_pred": 10220, + "n_ref": 10338 + }, + "3": { + "Dice": 0.9462111360680932, + "FN": 246, + "FP": 1119, + "IoU": 0.8979133946600852, + "TN": 883299, + "TP": 12006, + "n_pred": 13125, + "n_ref": 12252 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient055_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient055_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.767597507500577, + "FN": 1367, + "FP": 1654, + "IoU": 0.6228464419475656, + "TN": 888660, + "TP": 4989, + "n_pred": 6643, + "n_ref": 6356 + }, + "2": { + "Dice": 0.8872479660417404, + "FN": 1485, + "FP": 1065, + "IoU": 0.7973456250496702, + "TN": 884087, + "TP": 10033, + "n_pred": 11098, + "n_ref": 11518 + }, + "3": { + "Dice": 0.9436745641484131, + "FN": 382, + "FP": 626, + "IoU": 0.8933559035124842, + "TN": 887218, + "TP": 8444, + "n_pred": 9070, + "n_ref": 8826 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient055_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient055_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9461285609934259, + "FN": 858, + "FP": 322, + "IoU": 0.8977646854964477, + "TN": 750506, + "TP": 10362, + "n_pred": 10684, + "n_ref": 11220 + }, + "2": { + "Dice": 0.9336059190031153, + "FN": 822, + "FP": 542, + "IoU": 0.875479276976447, + "TN": 751094, + "TP": 9590, + "n_pred": 10132, + "n_ref": 10412 + }, + "3": { + "Dice": 0.9760865917100184, + "FN": 119, + "FP": 451, + "IoU": 0.9532901745472425, + "TN": 749845, + "TP": 11633, + "n_pred": 12084, + "n_ref": 11752 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient059_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient059_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7953929539295393, + "FN": 270, + "FP": 1542, + "IoU": 0.6602924634420697, + "TN": 756714, + "TP": 3522, + "n_pred": 5064, + "n_ref": 3792 + }, + "2": { + "Dice": 0.9046045384445913, + "FN": 1367, + "FP": 798, + "IoU": 0.825824617860016, + "TN": 749618, + "TP": 10265, + "n_pred": 11063, + "n_ref": 11632 + }, + "3": { + "Dice": 0.9501354616680091, + "FN": 346, + "FP": 335, + "IoU": 0.90500767192077, + "TN": 754879, + "TP": 6488, + "n_pred": 6823, + "n_ref": 6834 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient059_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient059_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8203557418453437, + "FN": 309, + "FP": 3034, + "IoU": 0.6954263848396501, + "TN": 984352, + "TP": 7633, + "n_pred": 10667, + "n_ref": 7942 + }, + "2": { + "Dice": 0.8327468660655377, + "FN": 1175, + "FP": 1867, + "IoU": 0.7134243994347621, + "TN": 984713, + "TP": 7573, + "n_pred": 9440, + "n_ref": 8748 + }, + "3": { + "Dice": 0.9667801385139101, + "FN": 74, + "FP": 1058, + "IoU": 0.935696432628948, + "TN": 977724, + "TP": 16472, + "n_pred": 17530, + "n_ref": 16546 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient060_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient060_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6825626204238922, + "FN": 408, + "FP": 2228, + "IoU": 0.5180987202925046, + "TN": 989858, + "TP": 2834, + "n_pred": 5062, + "n_ref": 3242 + }, + "2": { + "Dice": 0.8325104443600456, + "FN": 662, + "FP": 2425, + "IoU": 0.7130774235523748, + "TN": 984569, + "TP": 7672, + "n_pred": 10097, + "n_ref": 8334 + }, + "3": { + "Dice": 0.9210479887085392, + "FN": 173, + "FP": 1617, + "IoU": 0.8536505600523261, + "TN": 983097, + "TP": 10441, + "n_pred": 12058, + "n_ref": 10614 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient060_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient060_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9383683389559981, + "FN": 1390, + "FP": 309, + "IoU": 0.8838925715847742, + "TN": 743383, + "TP": 12934, + "n_pred": 13243, + "n_ref": 14324 + }, + "2": { + "Dice": 0.888419610752811, + "FN": 1029, + "FP": 926, + "IoU": 0.799240090367632, + "TN": 748278, + "TP": 7783, + "n_pred": 8709, + "n_ref": 8812 + }, + "3": { + "Dice": 0.9672308558071079, + "FN": 130, + "FP": 627, + "IoU": 0.9365412021124989, + "TN": 746087, + "TP": 11172, + "n_pred": 11799, + "n_ref": 11302 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient061_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient061_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7470230862697448, + "FN": 625, + "FP": 2498, + "IoU": 0.5961986035686578, + "TN": 750282, + "TP": 4611, + "n_pred": 7109, + "n_ref": 5236 + }, + "2": { + "Dice": 0.8923141669735388, + "FN": 851, + "FP": 1196, + "IoU": 0.8055661094224924, + "TN": 747488, + "TP": 8481, + "n_pred": 9677, + "n_ref": 9332 + }, + "3": { + "Dice": 0.8220152767604897, + "FN": 264, + "FP": 1437, + "IoU": 0.6978148871913306, + "TN": 752387, + "TP": 3928, + "n_pred": 5365, + "n_ref": 4192 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient061_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient061_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9329734000526732, + "FN": 861, + "FP": 157, + "IoU": 0.8743675182031346, + "TN": 630873, + "TP": 7085, + "n_pred": 7242, + "n_ref": 7946 + }, + "2": { + "Dice": 0.8732394366197183, + "FN": 592, + "FP": 794, + "IoU": 0.775, + "TN": 632816, + "TP": 4774, + "n_pred": 5568, + "n_ref": 5366 + }, + "3": { + "Dice": 0.9564728218831305, + "FN": 533, + "FP": 86, + "IoU": 0.9165768194070081, + "TN": 631556, + "TP": 6801, + "n_pred": 6887, + "n_ref": 7334 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient070_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient070_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7055266658604427, + "FN": 103, + "FP": 2332, + "IoU": 0.5450298953662183, + "TN": 633624, + "TP": 2917, + "n_pred": 5249, + "n_ref": 3020 + }, + "2": { + "Dice": 0.9116311561299336, + "FN": 827, + "FP": 438, + "IoU": 0.8376123234916559, + "TN": 631186, + "TP": 6525, + "n_pred": 6963, + "n_ref": 7352 + }, + "3": { + "Dice": 0.9096311833595525, + "FN": 154, + "FP": 363, + "IoU": 0.8342417441487656, + "TN": 635857, + "TP": 2602, + "n_pred": 2965, + "n_ref": 2756 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient070_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient070_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9108828716671854, + "FN": 2270, + "FP": 307, + "IoU": 0.8363497809106496, + "TN": 967293, + "TP": 13170, + "n_pred": 13477, + "n_ref": 15440 + }, + "2": { + "Dice": 0.8722924630010781, + "FN": 996, + "FP": 1610, + "IoU": 0.7735094733182687, + "TN": 971534, + "TP": 8900, + "n_pred": 10510, + "n_ref": 9896 + }, + "3": { + "Dice": 0.9639484032192863, + "FN": 103, + "FP": 878, + "IoU": 0.930405788876277, + "TN": 968944, + "TP": 13115, + "n_pred": 13993, + "n_ref": 13218 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient071_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient071_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9394161177522973, + "FN": 412, + "FP": 333, + "IoU": 0.8857537187547923, + "TN": 976519, + "TP": 5776, + "n_pred": 6109, + "n_ref": 6188 + }, + "2": { + "Dice": 0.9050413844996238, + "FN": 935, + "FP": 958, + "IoU": 0.8265530511269928, + "TN": 972126, + "TP": 9021, + "n_pred": 9979, + "n_ref": 9956 + }, + "3": { + "Dice": 0.8469714618520675, + "FN": 173, + "FP": 1929, + "IoU": 0.7345624447531254, + "TN": 975121, + "TP": 5817, + "n_pred": 7746, + "n_ref": 5990 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient071_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient071_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8514905893666712, + "FN": 3784, + "FP": 540, + "IoU": 0.7413875598086125, + "TN": 1031856, + "TP": 12396, + "n_pred": 12936, + "n_ref": 16180 + }, + "2": { + "Dice": 0.8927102376599635, + "FN": 895, + "FP": 983, + "IoU": 0.8062119492312455, + "TN": 1038885, + "TP": 7813, + "n_pred": 8796, + "n_ref": 8708 + }, + "3": { + "Dice": 0.968218713403061, + "FN": 272, + "FP": 515, + "IoU": 0.9383953033268102, + "TN": 1035801, + "TP": 11988, + "n_pred": 12503, + "n_ref": 12260 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient074_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient074_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8759849263446385, + "FN": 316, + "FP": 1132, + "IoU": 0.7793355684242609, + "TN": 1042014, + "TP": 5114, + "n_pred": 6246, + "n_ref": 5430 + }, + "2": { + "Dice": 0.8586483859415767, + "FN": 1930, + "FP": 833, + "IoU": 0.7523083818915285, + "TN": 1037421, + "TP": 8392, + "n_pred": 9225, + "n_ref": 10322 + }, + "3": { + "Dice": 0.9355336807566107, + "FN": 233, + "FP": 435, + "IoU": 0.8788757932910245, + "TN": 1043061, + "TP": 4847, + "n_pred": 5282, + "n_ref": 5080 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient074_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient074_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7892017294105241, + "FN": 3678, + "FP": 320, + "IoU": 0.6518028218080474, + "TN": 477734, + "TP": 7484, + "n_pred": 7804, + "n_ref": 11162 + }, + "2": { + "Dice": 0.7784391534391535, + "FN": 363, + "FP": 977, + "IoU": 0.6372495939361126, + "TN": 485522, + "TP": 2354, + "n_pred": 3331, + "n_ref": 2717 + }, + "3": { + "Dice": 0.963034188034188, + "FN": 144, + "FP": 202, + "IoU": 0.9287038944982485, + "TN": 484363, + "TP": 4507, + "n_pred": 4709, + "n_ref": 4651 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient084_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient084_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8542554871309016, + "FN": 1241, + "FP": 605, + "IoU": 0.7455898566703418, + "TN": 481960, + "TP": 5410, + "n_pred": 6015, + "n_ref": 6651 + }, + "2": { + "Dice": 0.8670590010562849, + "FN": 487, + "FP": 394, + "IoU": 0.7653169952051145, + "TN": 485462, + "TP": 2873, + "n_pred": 3267, + "n_ref": 3360 + }, + "3": { + "Dice": 0.8913548387096775, + "FN": 63, + "FP": 358, + "IoU": 0.8040037243947858, + "TN": 487068, + "TP": 1727, + "n_pred": 2085, + "n_ref": 1790 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient084_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient084_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8853444448239353, + "FN": 2915, + "FP": 442, + "IoU": 0.794276259345508, + "TN": 464162, + "TP": 12961, + "n_pred": 13403, + "n_ref": 15876 + }, + "2": { + "Dice": 0.806973058637084, + "FN": 700, + "FP": 1127, + "IoU": 0.6764080765143464, + "TN": 474834, + "TP": 3819, + "n_pred": 4946, + "n_ref": 4519 + }, + "3": { + "Dice": 0.9493680028891297, + "FN": 388, + "FP": 313, + "IoU": 0.9036161143957102, + "TN": 473207, + "TP": 6572, + "n_pred": 6885, + "n_ref": 6960 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient085_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient085_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9075461355746391, + "FN": 1677, + "FP": 347, + "IoU": 0.8307409265763506, + "TN": 468522, + "TP": 9934, + "n_pred": 10281, + "n_ref": 11611 + }, + "2": { + "Dice": 0.8301958547252329, + "FN": 1296, + "FP": 490, + "IoU": 0.7096879063719116, + "TN": 474328, + "TP": 4366, + "n_pred": 4856, + "n_ref": 5662 + }, + "3": { + "Dice": 0.879739625711961, + "FN": 103, + "FP": 636, + "IoU": 0.7852992446252179, + "TN": 477038, + "TP": 2703, + "n_pred": 3339, + "n_ref": 2806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient085_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient085_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7468126052441665, + "FN": 8254, + "FP": 166, + "IoU": 0.5959305115654093, + "TN": 623802, + "TP": 12418, + "n_pred": 12584, + "n_ref": 20672 + }, + "2": { + "Dice": 0.8026651860077735, + "FN": 1838, + "FP": 1716, + "IoU": 0.6703765535151178, + "TN": 633858, + "TP": 7228, + "n_pred": 8944, + "n_ref": 9066 + }, + "3": { + "Dice": 0.9307493932038835, + "FN": 1727, + "FP": 99, + "IoU": 0.8704688940909413, + "TN": 630543, + "TP": 12271, + "n_pred": 12370, + "n_ref": 13998 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient087_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient087_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7529476932816332, + "FN": 5817, + "FP": 427, + "IoU": 0.6037819658607779, + "TN": 628881, + "TP": 9515, + "n_pred": 9942, + "n_ref": 15332 + }, + "2": { + "Dice": 0.8496819851294455, + "FN": 2681, + "FP": 675, + "IoU": 0.7386496378786699, + "TN": 631799, + "TP": 9485, + "n_pred": 10160, + "n_ref": 12166 + }, + "3": { + "Dice": 0.9080929111720999, + "FN": 779, + "FP": 594, + "IoU": 0.8316576753310446, + "TN": 636484, + "TP": 6783, + "n_pred": 7377, + "n_ref": 7562 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient087_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient087_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8442475290909977, + "FN": 4712, + "FP": 1686, + "IoU": 0.7304743449321762, + "TN": 540742, + "TP": 17340, + "n_pred": 19026, + "n_ref": 22052 + }, + "2": { + "Dice": 0.7926497771012286, + "FN": 824, + "FP": 1083, + "IoU": 0.6565201729106628, + "TN": 558928, + "TP": 3645, + "n_pred": 4728, + "n_ref": 4469 + }, + "3": { + "Dice": 0.9616060225846926, + "FN": 233, + "FP": 379, + "IoU": 0.9260512324794586, + "TN": 556204, + "TP": 7664, + "n_pred": 8043, + "n_ref": 7897 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient093_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient093_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6883294762197137, + "FN": 1145, + "FP": 5454, + "IoU": 0.5247731528157857, + "TN": 550594, + "TP": 7287, + "n_pred": 12741, + "n_ref": 8432 + }, + "2": { + "Dice": 0.8467611336032389, + "FN": 680, + "FP": 834, + "IoU": 0.7342460944356679, + "TN": 558783, + "TP": 4183, + "n_pred": 5017, + "n_ref": 4863 + }, + "3": { + "Dice": 0.8749834283441601, + "FN": 152, + "FP": 791, + "IoU": 0.7777515908555267, + "TN": 560237, + "TP": 3300, + "n_pred": 4091, + "n_ref": 3452 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient093_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient093_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7419806913734039, + "FN": 2810, + "FP": 504, + "IoU": 0.5898007179106325, + "TN": 410801, + "TP": 4765, + "n_pred": 5269, + "n_ref": 7575 + }, + "2": { + "Dice": 0.4820488271900431, + "FN": 1849, + "FP": 315, + "IoU": 0.3175654367707348, + "TN": 415709, + "TP": 1007, + "n_pred": 1322, + "n_ref": 2856 + }, + "3": { + "Dice": 0.8260204681802141, + "FN": 688, + "FP": 791, + "IoU": 0.7036072144288578, + "TN": 413890, + "TP": 3511, + "n_pred": 4302, + "n_ref": 4199 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient094_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient094_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7039803540366315, + "FN": 1297, + "FP": 1596, + "IoU": 0.5431864834991316, + "TN": 412547, + "TP": 3440, + "n_pred": 5036, + "n_ref": 4737 + }, + "2": { + "Dice": 0.5516524631053835, + "FN": 1666, + "FP": 491, + "IoU": 0.38088404133180254, + "TN": 415396, + "TP": 1327, + "n_pred": 1818, + "n_ref": 2993 + }, + "3": { + "Dice": 0.8211460544086436, + "FN": 255, + "FP": 672, + "IoU": 0.6965630114566285, + "TN": 415825, + "TP": 2128, + "n_pred": 2800, + "n_ref": 2383 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient094_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient094_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9380284866022774, + "FN": 1086, + "FP": 563, + "IoU": 0.8832896878759997, + "TN": 482381, + "TP": 12480, + "n_pred": 13043, + "n_ref": 13566 + }, + "2": { + "Dice": 0.8754651780967571, + "FN": 1085, + "FP": 789, + "IoU": 0.7785131781113344, + "TN": 488049, + "TP": 6587, + "n_pred": 7376, + "n_ref": 7672 + }, + "3": { + "Dice": 0.9533652948135234, + "FN": 116, + "FP": 633, + "IoU": 0.9108863771564545, + "TN": 488105, + "TP": 7656, + "n_pred": 8289, + "n_ref": 7772 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient098_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient098_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9237953075362652, + "FN": 1194, + "FP": 797, + "IoU": 0.8583825307632121, + "TN": 482451, + "TP": 12068, + "n_pred": 12865, + "n_ref": 13262 + }, + "2": { + "Dice": 0.8892442039234979, + "FN": 1246, + "FP": 555, + "IoU": 0.8005757944856605, + "TN": 487479, + "TP": 7230, + "n_pred": 7785, + "n_ref": 8476 + }, + "3": { + "Dice": 0.884278593560555, + "FN": 118, + "FP": 741, + "IoU": 0.7925621830475731, + "TN": 492369, + "TP": 3282, + "n_pred": 4023, + "n_ref": 3400 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/predVal/patient098_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_raw/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/labelsVal/patient098_frame09.nii.gz" + } + ] +} \ No newline at end of file diff --git a/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_004/summary_cross_val.json b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_004/summary_cross_val.json new file mode 100644 index 0000000000000000000000000000000000000000..580bd4958dead7e694fb3a73597894b3fec829c7 --- /dev/null +++ b/nnActive_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/loop_004/summary_cross_val.json @@ -0,0 +1,3768 @@ +{ + "fold_0": { + "foreground_mean": { + "Dice": 0.8253092697280721, + "FN": 109.23333333333333, + "FP": 69.96666666666665, + "IoU": 0.7313932702783648, + "TN": 9256.233333333334, + "TP": 804.5666666666666, + "n_pred": 874.5333333333334, + "n_ref": 913.8000000000001 + }, + "mean": { + "1": { + "Dice": 0.6805811498272987, + "FN": 130.25, + "FP": 72.4, + "IoU": 0.5456921648080297, + "TN": 9692.2, + "TP": 345.15, + "n_pred": 417.55, + "n_ref": 475.4 + }, + "2": { + "Dice": 0.8325413235569479, + "FN": 144.2, + "FP": 95.3, + "IoU": 0.719996274177093, + "TN": 9311.95, + "TP": 688.55, + "n_pred": 783.85, + "n_ref": 832.75 + }, + "3": { + "Dice": 0.9628053357999696, + "FN": 53.25, + "FP": 42.2, + "IoU": 0.9284913718499715, + "TN": 8764.55, + "TP": 1380.0, + "n_pred": 1422.2, + "n_ref": 1433.25 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.629156010230179, + "FN": 145, + "FP": 0, + "IoU": 0.458955223880597, + "TN": 6132, + "TP": 123, + "n_pred": 123, + "n_ref": 268 + }, + "2": { + "Dice": 0.8341869398207427, + "FN": 331, + "FP": 187, + "IoU": 0.7155409115870401, + "TN": 4579, + "TP": 1303, + "n_pred": 1490, + "n_ref": 1634 + }, + "3": { + "Dice": 0.9446985446985448, + "FN": 100, + "FP": 33, + "IoU": 0.8951930654058313, + "TN": 5131, + "TP": 1136, + "n_pred": 1169, + "n_ref": 1236 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient003_frame15.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient003_frame15.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8075596634018485, + "FN": 1335, + "FP": 60, + "IoU": 0.6772327626099028, + "TN": 14878, + "TP": 2927, + "n_pred": 2987, + "n_ref": 4262 + }, + "2": { + "Dice": 0.8876174908050675, + "FN": 154, + "FP": 396, + "IoU": 0.7979426891991183, + "TN": 16478, + "TP": 2172, + "n_pred": 2568, + "n_ref": 2326 + }, + "3": { + "Dice": 0.9790794979079498, + "FN": 249, + "FP": 96, + "IoU": 0.9590163934426229, + "TN": 10782, + "TP": 8073, + "n_pred": 8169, + "n_ref": 8322 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient017_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient017_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.630192502532928, + "FN": 43, + "FP": 322, + "IoU": 0.46005917159763315, + "TN": 12124, + "TP": 311, + "n_pred": 633, + "n_ref": 354 + }, + "2": { + "Dice": 0.8903122497998399, + "FN": 404, + "FP": 281, + "IoU": 0.8023088023088023, + "TN": 9335, + "TP": 2780, + "n_pred": 3061, + "n_ref": 3184 + }, + "3": { + "Dice": 0.966824644549763, + "FN": 50, + "FP": 237, + "IoU": 0.9357798165137615, + "TN": 8331, + "TP": 4182, + "n_pred": 4419, + "n_ref": 4232 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient022_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient022_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient024_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient024_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8775137111517367, + "FN": 29, + "FP": 38, + "IoU": 0.7817589576547231, + "TN": 18893, + "TP": 240, + "n_pred": 278, + "n_ref": 269 + }, + "2": { + "Dice": 0.8966743731104393, + "FN": 356, + "FP": 225, + "IoU": 0.8127014829142488, + "TN": 16098, + "TP": 2521, + "n_pred": 2746, + "n_ref": 2877 + }, + "3": { + "Dice": 0.9574937490807471, + "FN": 160, + "FP": 129, + "IoU": 0.9184537246049661, + "TN": 15656, + "TP": 3255, + "n_pred": 3384, + "n_ref": 3415 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient025_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient025_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8481012658227848, + "FN": 9, + "FP": 15, + "IoU": 0.7362637362637363, + "TN": 6309, + "TP": 67, + "n_pred": 82, + "n_ref": 76 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient027_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient027_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient027_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient031_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient031_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient032_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient032_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.79104, + "FN": 561, + "FP": 92, + "IoU": 0.6543144520910534, + "TN": 17311, + "TP": 1236, + "n_pred": 1328, + "n_ref": 1797 + }, + "2": { + "Dice": 0.8851410293690026, + "FN": 222, + "FP": 173, + "IoU": 0.7939488784559207, + "TN": 17283, + "TP": 1522, + "n_pred": 1695, + "n_ref": 1744 + }, + "3": { + "Dice": 0.9563812600969306, + "FN": 109, + "FP": 26, + "IoU": 0.9164086687306502, + "TN": 17585, + "TP": 1480, + "n_pred": 1506, + "n_ref": 1589 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient037_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient037_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient037_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient038_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient038_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient039_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient039_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8216716580451947, + "FN": 50, + "FP": 605, + "IoU": 0.6973197781885397, + "TN": 4236, + "TP": 1509, + "n_pred": 2114, + "n_ref": 1559 + }, + "2": { + "Dice": 0.8661567877629063, + "FN": 76, + "FP": 64, + "IoU": 0.7639123102866779, + "TN": 5807, + "TP": 453, + "n_pred": 517, + "n_ref": 529 + }, + "3": { + "Dice": 0.9789536981358989, + "FN": 8, + "FP": 27, + "IoU": 0.9587750294464076, + "TN": 5551, + "TP": 814, + "n_pred": 841, + "n_ref": 822 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient041_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient041_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.45054945054945056, + "FN": 207, + "FP": 93, + "IoU": 0.2907801418439716, + "TN": 18777, + "TP": 123, + "n_pred": 216, + "n_ref": 330 + }, + "2": { + "Dice": 0.6692556634304208, + "FN": 646, + "FP": 376, + "IoU": 0.5029182879377432, + "TN": 17144, + "TP": 1034, + "n_pred": 1410, + "n_ref": 1680 + }, + "3": { + "Dice": 0.9578622816032888, + "FN": 194, + "FP": 216, + "IoU": 0.9191321499013807, + "TN": 14130, + "TP": 4660, + "n_pred": 4876, + "n_ref": 4854 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient047_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient047_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8389764797105195, + "FN": 461, + "FP": 162, + "IoU": 0.7226179875333927, + "TN": 4154, + "TP": 1623, + "n_pred": 1785, + "n_ref": 2084 + }, + "3": { + "Dice": 0.9691438504997827, + "FN": 147, + "FP": 66, + "IoU": 0.9401349072512648, + "TN": 2842, + "TP": 3345, + "n_pred": 3411, + "n_ref": 3492 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient050_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient050_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient057_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient057_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.21705426356589147, + "FN": 182, + "FP": 20, + "IoU": 0.12173913043478261, + "TN": 6170, + "TP": 28, + "n_pred": 48, + "n_ref": 210 + }, + "2": { + "Dice": 0.7245508982035929, + "FN": 234, + "FP": 42, + "IoU": 0.568075117370892, + "TN": 5761, + "TP": 363, + "n_pred": 405, + "n_ref": 597 + }, + "3": { + "Dice": 0.9548104956268222, + "FN": 48, + "FP": 14, + "IoU": 0.9135285913528591, + "TN": 5683, + "TP": 655, + "n_pred": 669, + "n_ref": 703 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient067_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient067_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient080_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient080_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7329729729729729, + "FN": 44, + "FP": 203, + "IoU": 0.5784982935153583, + "TN": 5814, + "TP": 339, + "n_pred": 542, + "n_ref": 383 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_0/validation/patient097_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient097_frame11.nii.gz" + } + ] + }, + "fold_1": { + "foreground_mean": { + "Dice": 0.7869655567431576, + "FN": 133.31666666666666, + "FP": 131.05, + "IoU": 0.701836036673332, + "TN": 8697.6, + "TP": 958.0333333333333, + "n_pred": 1089.0833333333333, + "n_ref": 1091.3500000000001 + }, + "mean": { + "1": { + "Dice": 0.7337304611796986, + "FN": 109.45, + "FP": 172.65, + "IoU": 0.6426517727292211, + "TN": 8954.05, + "TP": 683.85, + "n_pred": 856.5, + "n_ref": 793.3 + }, + "2": { + "Dice": 0.7744324842371508, + "FN": 174.7, + "FP": 142.45, + "IoU": 0.6730175211871829, + "TN": 8684.95, + "TP": 917.9, + "n_pred": 1060.35, + "n_ref": 1092.6 + }, + "3": { + "Dice": 0.8527337248126233, + "FN": 115.8, + "FP": 78.05, + "IoU": 0.7898388161035922, + "TN": 8453.8, + "TP": 1272.35, + "n_pred": 1350.4, + "n_ref": 1388.15 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.9220146222583265, + "FN": 135, + "FP": 57, + "IoU": 0.8553127354935945, + "TN": 11473, + "TP": 1135, + "n_pred": 1192, + "n_ref": 1270 + }, + "2": { + "Dice": 0.8787446504992867, + "FN": 393, + "FP": 202, + "IoU": 0.7837150127226463, + "TN": 10049, + "TP": 2156, + "n_pred": 2358, + "n_ref": 2549 + }, + "3": { + "Dice": 0.9826449149600833, + "FN": 155, + "FP": 45, + "IoU": 0.9658819515523712, + "TN": 6938, + "TP": 5662, + "n_pred": 5707, + "n_ref": 5817 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient003_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient003_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9614213197969543, + "FN": 56, + "FP": 96, + "IoU": 0.9257086999022482, + "TN": 4354, + "TP": 1894, + "n_pred": 1990, + "n_ref": 1950 + }, + "2": { + "Dice": 0.9219298245614035, + "FN": 103, + "FP": 75, + "IoU": 0.855166802278275, + "TN": 5171, + "TP": 1051, + "n_pred": 1126, + "n_ref": 1154 + }, + "3": { + "Dice": 0.9697525206232814, + "FN": 64, + "FP": 2, + "IoU": 0.9412811387900356, + "TN": 5276, + "TP": 1058, + "n_pred": 1060, + "n_ref": 1122 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient005_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient005_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8380320619126589, + "FN": 111, + "FP": 182, + "IoU": 0.7212178877259753, + "TN": 5349, + "TP": 758, + "n_pred": 940, + "n_ref": 869 + }, + "3": { + "Dice": 0.9629629629629629, + "FN": 150, + "FP": 5, + "IoU": 0.9285714285714286, + "TN": 4230, + "TP": 2015, + "n_pred": 2020, + "n_ref": 2165 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient011_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient011_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9383636081353827, + "FN": 376, + "FP": 21, + "IoU": 0.8838841766598421, + "TN": 9381, + "TP": 3022, + "n_pred": 3043, + "n_ref": 3398 + }, + "2": { + "Dice": 0.9122807017543859, + "FN": 0, + "FP": 95, + "IoU": 0.8387096774193549, + "TN": 12211, + "TP": 494, + "n_pred": 589, + "n_ref": 494 + }, + "3": { + "Dice": 0.8412698412698413, + "FN": 40, + "FP": 0, + "IoU": 0.726027397260274, + "TN": 12654, + "TP": 106, + "n_pred": 106, + "n_ref": 146 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient013_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient013_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.5142478462557986, + "FN": 498, + "FP": 235, + "IoU": 0.34611953612845675, + "TN": 5279, + "TP": 388, + "n_pred": 623, + "n_ref": 886 + }, + "3": { + "Dice": 0.8428273188189681, + "FN": 1046, + "FP": 8, + "IoU": 0.7283505154639175, + "TN": 2520, + "TP": 2826, + "n_pred": 2834, + "n_ref": 3872 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient014_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.48399775407074674, + "FN": 787, + "FP": 132, + "IoU": 0.31925925925925924, + "TN": 5050, + "TP": 431, + "n_pred": 563, + "n_ref": 1218 + }, + "2": { + "Dice": 0.7160766961651918, + "FN": 120, + "FP": 650, + "IoU": 0.5577254451464676, + "TN": 4659, + "TP": 971, + "n_pred": 1621, + "n_ref": 1091 + }, + "3": { + "Dice": 0.9177536729369765, + "FN": 107, + "FP": 492, + "IoU": 0.8480081197665567, + "TN": 2459, + "TP": 3342, + "n_pred": 3834, + "n_ref": 3449 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient014_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient014_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4175824175824176, + "FN": 53, + "FP": 0, + "IoU": 0.2638888888888889, + "TN": 6328, + "TP": 19, + "n_pred": 19, + "n_ref": 72 + }, + "2": { + "Dice": 0.9055793991416309, + "FN": 24, + "FP": 64, + "IoU": 0.8274509803921568, + "TN": 5890, + "TP": 422, + "n_pred": 486, + "n_ref": 446 + }, + "3": { + "Dice": 0.9362637362637363, + "FN": 27, + "FP": 2, + "IoU": 0.8801652892561983, + "TN": 6158, + "TP": 213, + "n_pred": 215, + "n_ref": 240 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient019_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient019_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.4192139737991266, + "FN": 29, + "FP": 769, + "IoU": 0.26519337016574585, + "TN": 11714, + "TP": 288, + "n_pred": 1057, + "n_ref": 317 + }, + "2": { + "Dice": 0.8429915799900941, + "FN": 975, + "FP": 293, + "IoU": 0.728595890410959, + "TN": 8128, + "TP": 3404, + "n_pred": 3697, + "n_ref": 4379 + }, + "3": { + "Dice": 0.7463556851311953, + "FN": 129, + "FP": 132, + "IoU": 0.5953488372093023, + "TN": 12155, + "TP": 384, + "n_pred": 516, + "n_ref": 513 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient029_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient029_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9598551162088741, + "FN": 120, + "FP": 13, + "IoU": 0.922809053975624, + "TN": 17477, + "TP": 1590, + "n_pred": 1603, + "n_ref": 1710 + }, + "2": { + "Dice": 0.7450980392156863, + "FN": 6, + "FP": 20, + "IoU": 0.59375, + "TN": 19136, + "TP": 38, + "n_pred": 58, + "n_ref": 44 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 19200, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient036_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient036_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6666666666666666, + "FN": 6, + "FP": 0, + "IoU": 0.5, + "TN": 12788, + "TP": 6, + "n_pred": 6, + "n_ref": 12 + }, + "2": { + "Dice": 0.8983104877271278, + "FN": 105, + "FP": 214, + "IoU": 0.8153935185185185, + "TN": 11072, + "TP": 1409, + "n_pred": 1623, + "n_ref": 1514 + }, + "3": { + "Dice": 0.9791847354726799, + "FN": 34, + "FP": 62, + "IoU": 0.9592183517417162, + "TN": 10446, + "TP": 2258, + "n_pred": 2320, + "n_ref": 2292 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient039_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient039_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8840017248814144, + "FN": 83, + "FP": 186, + "IoU": 0.7921174652241113, + "TN": 11506, + "TP": 1025, + "n_pred": 1211, + "n_ref": 1108 + }, + "2": { + "Dice": 0.9128787878787878, + "FN": 450, + "FP": 56, + "IoU": 0.8397212543554007, + "TN": 9643, + "TP": 2651, + "n_pred": 2707, + "n_ref": 3101 + }, + "3": { + "Dice": 0.9670720854345891, + "FN": 36, + "FP": 75, + "IoU": 0.9362435381964388, + "TN": 11059, + "TP": 1630, + "n_pred": 1705, + "n_ref": 1666 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient040_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient040_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9010165864098448, + "FN": 84, + "FP": 101, + "IoU": 0.8198636806231743, + "TN": 5373, + "TP": 842, + "n_pred": 943, + "n_ref": 926 + }, + "2": { + "Dice": 0.9544626593806922, + "FN": 36, + "FP": 89, + "IoU": 0.9128919860627178, + "TN": 4965, + "TP": 1310, + "n_pred": 1399, + "n_ref": 1346 + }, + "3": { + "Dice": 0.9625, + "FN": 18, + "FP": 6, + "IoU": 0.927710843373494, + "TN": 6068, + "TP": 308, + "n_pred": 314, + "n_ref": 326 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient058_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient058_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8346456692913385, + "FN": 11, + "FP": 10, + "IoU": 0.7162162162162162, + "TN": 6326, + "TP": 53, + "n_pred": 63, + "n_ref": 64 + }, + "2": { + "Dice": 0.8588899341486359, + "FN": 159, + "FP": 141, + "IoU": 0.752679307502061, + "TN": 5187, + "TP": 913, + "n_pred": 1054, + "n_ref": 1072 + }, + "3": { + "Dice": 0.9640151515151515, + "FN": 18, + "FP": 134, + "IoU": 0.9305301645338209, + "TN": 4212, + "TP": 2036, + "n_pred": 2170, + "n_ref": 2054 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient063_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient063_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5386250885896527, + "FN": 226, + "FP": 425, + "IoU": 0.3685741998060136, + "TN": 5369, + "TP": 380, + "n_pred": 805, + "n_ref": 606 + }, + "2": { + "Dice": 0.599502487562189, + "FN": 301, + "FP": 21, + "IoU": 0.4280639431616341, + "TN": 5837, + "TP": 241, + "n_pred": 262, + "n_ref": 542 + }, + "3": { + "Dice": 0.8117894736842105, + "FN": 391, + "FP": 56, + "IoU": 0.6832034018426648, + "TN": 4989, + "TP": 964, + "n_pred": 1020, + "n_ref": 1355 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient081_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient081_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient086_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient086_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9035714285714286, + "FN": 96, + "FP": 12, + "IoU": 0.8241042345276873, + "TN": 18586, + "TP": 506, + "n_pred": 518, + "n_ref": 602 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 19198, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 3, + "IoU": 0.0, + "TN": 19197, + "TP": 0, + "n_pred": 3, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient086_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient086_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 1518, + "IoU": 0.0, + "TN": 11282, + "TP": 0, + "n_pred": 1518, + "n_ref": 0 + }, + "2": { + "Dice": 0.764179104477612, + "FN": 67, + "FP": 328, + "IoU": 0.6183574879227053, + "TN": 11765, + "TP": 640, + "n_pred": 968, + "n_ref": 707 + }, + "3": { + "Dice": 0.8037081821846029, + "FN": 61, + "FP": 426, + "IoU": 0.671832884097035, + "TN": 11316, + "TP": 997, + "n_pred": 1423, + "n_ref": 1058 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient088_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient088_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.948910325116113, + "FN": 88, + "FP": 55, + "IoU": 0.902787219578518, + "TN": 4929, + "TP": 1328, + "n_pred": 1383, + "n_ref": 1416 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient090_frame04.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient090_frame04.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9598010774968918, + "FN": 39, + "FP": 58, + "IoU": 0.9227091633466136, + "TN": 5145, + "TP": 1158, + "n_pred": 1216, + "n_ref": 1197 + }, + "2": { + "Dice": 0.9021479713603818, + "FN": 146, + "FP": 182, + "IoU": 0.8217391304347826, + "TN": 4560, + "TP": 1512, + "n_pred": 1694, + "n_ref": 1658 + }, + "3": { + "Dice": 0.9556393157436939, + "FN": 40, + "FP": 113, + "IoU": 0.915047196002221, + "TN": 4599, + "TP": 1648, + "n_pred": 1761, + "n_ref": 1688 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient099_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient099_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_1/validation/patient100_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient100_frame13.nii.gz" + } + ] + }, + "fold_2": { + "foreground_mean": { + "Dice": 0.7349850627203184, + "FN": 72.07017543859648, + "FP": 102.0877192982456, + "IoU": 0.6611440342596019, + "TN": 9729.491228070176, + "TP": 875.298245614035, + "n_pred": 977.3859649122807, + "n_ref": 947.3684210526316 + }, + "mean": { + "1": { + "Dice": 0.6556067415691044, + "FN": 66.78947368421052, + "FP": 146.52631578947367, + "IoU": 0.5731325881178448, + "TN": 9626.105263157895, + "TP": 939.5263157894736, + "n_pred": 1086.0526315789473, + "n_ref": 1006.3157894736842 + }, + "2": { + "Dice": 0.8325792173156586, + "FN": 127.36842105263158, + "FP": 93.21052631578948, + "IoU": 0.7314048841528835, + "TN": 9874.105263157895, + "TP": 684.2631578947369, + "n_pred": 777.4736842105264, + "n_ref": 811.6315789473684 + }, + "3": { + "Dice": 0.7167692292761922, + "FN": 22.05263157894737, + "FP": 66.52631578947368, + "IoU": 0.6788946305080773, + "TN": 9688.263157894737, + "TP": 1002.1052631578947, + "n_pred": 1068.6315789473683, + "n_ref": 1024.157894736842 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.6990846681922197, + "FN": 23, + "FP": 503, + "IoU": 0.5373790677220757, + "TN": 5263, + "TP": 611, + "n_pred": 1114, + "n_ref": 634 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient005_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient005_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8169014084507042, + "FN": 7, + "FP": 32, + "IoU": 0.6904761904761905, + "TN": 6274, + "TP": 87, + "n_pred": 119, + "n_ref": 94 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 7, + "IoU": 0.0, + "TN": 6393, + "TP": 0, + "n_pred": 7, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient008_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient008_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient009_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient009_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 88, + "FP": 0, + "IoU": 0.0, + "TN": 6312, + "TP": 0, + "n_pred": 0, + "n_ref": 88 + }, + "2": { + "Dice": 0.8187134502923976, + "FN": 10, + "FP": 52, + "IoU": 0.693069306930693, + "TN": 6198, + "TP": 140, + "n_pred": 192, + "n_ref": 150 + }, + "3": { + "Dice": 0.9206349206349206, + "FN": 0, + "FP": 10, + "IoU": 0.8529411764705882, + "TN": 6332, + "TP": 58, + "n_pred": 68, + "n_ref": 58 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient012_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient012_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9367127973876536, + "FN": 36, + "FP": 371, + "IoU": 0.8809593448376718, + "TN": 2981, + "TP": 3012, + "n_pred": 3383, + "n_ref": 3048 + }, + "2": { + "Dice": 0.8886756238003839, + "FN": 230, + "FP": 2, + "IoU": 0.7996545768566494, + "TN": 5242, + "TP": 926, + "n_pred": 928, + "n_ref": 1156 + }, + "3": { + "Dice": 0.97117903930131, + "FN": 0, + "FP": 66, + "IoU": 0.9439728353140917, + "TN": 5222, + "TP": 1112, + "n_pred": 1178, + "n_ref": 1112 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient013_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient013_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.008281573498964804, + "FN": 10, + "FP": 469, + "IoU": 0.004158004158004158, + "TN": 18719, + "TP": 2, + "n_pred": 471, + "n_ref": 12 + }, + "2": { + "Dice": 0.9225941422594143, + "FN": 24, + "FP": 50, + "IoU": 0.8563106796116505, + "TN": 18685, + "TP": 441, + "n_pred": 491, + "n_ref": 465 + }, + "3": { + "Dice": 0.4444444444444444, + "FN": 0, + "FP": 10, + "IoU": 0.2857142857142857, + "TN": 19186, + "TP": 4, + "n_pred": 14, + "n_ref": 4 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient023_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient023_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient026_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient026_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 151, + "IoU": 0.0, + "TN": 38249, + "TP": 0, + "n_pred": 151, + "n_ref": 0 + }, + "2": { + "Dice": 0.3929098966026588, + "FN": 550, + "FP": 272, + "IoU": 0.24448529411764705, + "TN": 37312, + "TP": 266, + "n_pred": 538, + "n_ref": 816 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 336, + "IoU": 0.0, + "TN": 38064, + "TP": 0, + "n_pred": 336, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient028_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient028_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.56, + "FN": 9, + "FP": 2, + "IoU": 0.3888888888888889, + "TN": 12782, + "TP": 7, + "n_pred": 9, + "n_ref": 16 + }, + "2": { + "Dice": 0.8859753675009933, + "FN": 191, + "FP": 96, + "IoU": 0.7952924393723253, + "TN": 11398, + "TP": 1115, + "n_pred": 1211, + "n_ref": 1306 + }, + "3": { + "Dice": 0.9389544688026982, + "FN": 58, + "FP": 123, + "IoU": 0.8849332485696122, + "TN": 11227, + "TP": 1392, + "n_pred": 1515, + "n_ref": 1450 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient031_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient031_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9012464046021093, + "FN": 23, + "FP": 492, + "IoU": 0.8202443280977313, + "TN": 9935, + "TP": 2350, + "n_pred": 2842, + "n_ref": 2373 + }, + "2": { + "Dice": 0.9494276795005203, + "FN": 137, + "FP": 106, + "IoU": 0.9037242472266244, + "TN": 10276, + "TP": 2281, + "n_pred": 2387, + "n_ref": 2418 + }, + "3": { + "Dice": 0.9699570815450643, + "FN": 28, + "FP": 42, + "IoU": 0.9416666666666667, + "TN": 11600, + "TP": 1130, + "n_pred": 1172, + "n_ref": 1158 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient046_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient046_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6, + "FN": 11, + "FP": 5, + "IoU": 0.42857142857142855, + "TN": 6372, + "TP": 12, + "n_pred": 17, + "n_ref": 23 + }, + "2": { + "Dice": 0.6844964479732554, + "FN": 259, + "FP": 496, + "IoU": 0.5203303684879288, + "TN": 4826, + "TP": 819, + "n_pred": 1315, + "n_ref": 1078 + }, + "3": { + "Dice": 0.9595181397954896, + "FN": 29, + "FP": 260, + "IoU": 0.9221863220247711, + "TN": 2686, + "TP": 3425, + "n_pred": 3685, + "n_ref": 3454 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient051_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient051_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6956521739130435, + "FN": 0, + "FP": 21, + "IoU": 0.5333333333333333, + "TN": 6355, + "TP": 24, + "n_pred": 45, + "n_ref": 24 + }, + "2": { + "Dice": 0.8978960396039604, + "FN": 237, + "FP": 93, + "IoU": 0.8147108366086468, + "TN": 4619, + "TP": 1451, + "n_pred": 1544, + "n_ref": 1688 + }, + "3": { + "Dice": 0.9728817373691909, + "FN": 85, + "FP": 156, + "IoU": 0.9471954425942156, + "TN": 1836, + "TP": 4323, + "n_pred": 4479, + "n_ref": 4408 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient053_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient053_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient057_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient057_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9579386131110269, + "FN": 174, + "FP": 48, + "IoU": 0.9192727272727272, + "TN": 16450, + "TP": 2528, + "n_pred": 2576, + "n_ref": 2702 + }, + "2": { + "Dice": 0.896045658377497, + "FN": 257, + "FP": 253, + "IoU": 0.8116691285081241, + "TN": 16492, + "TP": 2198, + "n_pred": 2451, + "n_ref": 2455 + }, + "3": { + "Dice": 0.9651797477884434, + "FN": 29, + "FP": 156, + "IoU": 0.9327028010185522, + "TN": 16451, + "TP": 2564, + "n_pred": 2720, + "n_ref": 2593 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient062_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient062_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8313197026022305, + "FN": 208, + "FP": 518, + "IoU": 0.7113320079522862, + "TN": 3885, + "TP": 1789, + "n_pred": 2307, + "n_ref": 1997 + }, + "2": { + "Dice": 0.9093511450381679, + "FN": 79, + "FP": 111, + "IoU": 0.8337707786526685, + "TN": 5257, + "TP": 953, + "n_pred": 1064, + "n_ref": 1032 + }, + "3": { + "Dice": 0.9400510204081632, + "FN": 69, + "FP": 25, + "IoU": 0.8868832731648616, + "TN": 5569, + "TP": 737, + "n_pred": 762, + "n_ref": 806 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient065_frame14.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient065_frame14.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9622799664710813, + "FN": 30, + "FP": 105, + "IoU": 0.9273021001615509, + "TN": 4543, + "TP": 1722, + "n_pred": 1827, + "n_ref": 1752 + }, + "2": { + "Dice": 0.9194749911316069, + "FN": 164, + "FP": 63, + "IoU": 0.8509520682862771, + "TN": 4877, + "TP": 1296, + "n_pred": 1359, + "n_ref": 1460 + }, + "3": { + "Dice": 0.9820849684354206, + "FN": 34, + "FP": 71, + "IoU": 0.9648005363727791, + "TN": 3417, + "TP": 2878, + "n_pred": 2949, + "n_ref": 2912 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient082_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient082_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9158061953931692, + "FN": 407, + "FP": 17, + "IoU": 0.8446886446886447, + "TN": 3670, + "TP": 2306, + "n_pred": 2323, + "n_ref": 2713 + }, + "2": { + "Dice": 0.7966101694915254, + "FN": 47, + "FP": 1, + "IoU": 0.6619718309859155, + "TN": 6258, + "TP": 94, + "n_pred": 95, + "n_ref": 141 + }, + "3": { + "Dice": 0.0, + "FN": 0, + "FP": 1, + "IoU": 0.0, + "TN": 6399, + "TP": 0, + "n_pred": 1, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient083_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient083_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7992351816443595, + "FN": 93, + "FP": 12, + "IoU": 0.6656050955414012, + "TN": 12486, + "TP": 209, + "n_pred": 221, + "n_ref": 302 + }, + "2": { + "Dice": 0.8288822947576657, + "FN": 212, + "FP": 134, + "IoU": 0.7077702702702703, + "TN": 11616, + "TP": 838, + "n_pred": 972, + "n_ref": 1050 + }, + "3": { + "Dice": 0.9698836413415469, + "FN": 87, + "FP": 1, + "IoU": 0.9415282392026578, + "TN": 11295, + "TP": 1417, + "n_pred": 1418, + "n_ref": 1504 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient089_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient089_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9665438467207075, + "FN": 157, + "FP": 70, + "IoU": 0.9352538505419281, + "TN": 9294, + "TP": 3279, + "n_pred": 3349, + "n_ref": 3436 + }, + "2": { + "Dice": 0.8807339449541285, + "FN": 16, + "FP": 10, + "IoU": 0.7868852459016393, + "TN": 12678, + "TP": 96, + "n_pred": 106, + "n_ref": 112 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_2/validation/patient096_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient096_frame08.nii.gz" + } + ] + }, + "fold_3": { + "foreground_mean": { + "Dice": 0.7357746331406295, + "FN": 90.9298245614035, + "FP": 66.63157894736842, + "IoU": 0.6579882433118257, + "TN": 8927.719298245613, + "TP": 683.1403508771929, + "n_pred": 749.7719298245614, + "n_ref": 774.0701754385965 + }, + "mean": { + "1": { + "Dice": 0.429953228563003, + "FN": 140.05263157894737, + "FP": 78.52631578947368, + "IoU": 0.35816906602858717, + "TN": 9023.315789473685, + "TP": 526.5263157894736, + "n_pred": 605.0526315789474, + "n_ref": 666.578947368421 + }, + "2": { + "Dice": 0.855028220035991, + "FN": 99.15789473684211, + "FP": 77.52631578947368, + "IoU": 0.7532749535841207, + "TN": 8921.157894736842, + "TP": 670.578947368421, + "n_pred": 748.1052631578947, + "n_ref": 769.7368421052631 + }, + "3": { + "Dice": 0.9223424508228945, + "FN": 33.578947368421055, + "FP": 43.8421052631579, + "IoU": 0.8625207103227693, + "TN": 8838.684210526315, + "TP": 852.3157894736842, + "n_pred": 896.1578947368421, + "n_ref": 885.8947368421053 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": 0.7905711695376246, + "FN": 198, + "FP": 33, + "IoU": 0.6536731634182908, + "TN": 12133, + "TP": 436, + "n_pred": 469, + "n_ref": 634 + }, + "2": { + "Dice": 0.830997526793075, + "FN": 112, + "FP": 93, + "IoU": 0.7108603667136812, + "TN": 12091, + "TP": 504, + "n_pred": 597, + "n_ref": 616 + }, + "3": { + "Dice": 0.9681632653061224, + "FN": 76, + "FP": 2, + "IoU": 0.9382911392405063, + "TN": 11536, + "TP": 1186, + "n_pred": 1188, + "n_ref": 1262 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient010_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient010_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.5952890792291221, + "FN": 10, + "FP": 179, + "IoU": 0.42378048780487804, + "TN": 12472, + "TP": 139, + "n_pred": 318, + "n_ref": 149 + }, + "2": { + "Dice": 0.8450528935905414, + "FN": 161, + "FP": 337, + "IoU": 0.7316810344827587, + "TN": 10944, + "TP": 1358, + "n_pred": 1695, + "n_ref": 1519 + }, + "3": { + "Dice": 0.9730175077239959, + "FN": 43, + "FP": 88, + "IoU": 0.9474528680304853, + "TN": 10307, + "TP": 2362, + "n_pred": 2450, + "n_ref": 2405 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient012_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient012_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 10, + "IoU": 0.0, + "TN": 6390, + "TP": 0, + "n_pred": 10, + "n_ref": 0 + }, + "2": { + "Dice": 0.8465723612622416, + "FN": 102, + "FP": 180, + "IoU": 0.7339622641509433, + "TN": 5340, + "TP": 778, + "n_pred": 958, + "n_ref": 880 + }, + "3": { + "Dice": 0.9784504030268136, + "FN": 110, + "FP": 21, + "IoU": 0.9578099838969404, + "TN": 3295, + "TP": 2974, + "n_pred": 2995, + "n_ref": 3084 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient016_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient016_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8212450028555112, + "FN": 311, + "FP": 2, + "IoU": 0.6967054263565892, + "TN": 11768, + "TP": 719, + "n_pred": 721, + "n_ref": 1030 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient021_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 109, + "IoU": 0.0, + "TN": 6291, + "TP": 0, + "n_pred": 109, + "n_ref": 0 + }, + "2": { + "Dice": 0.8176795580110497, + "FN": 31, + "FP": 2, + "IoU": 0.6915887850467289, + "TN": 6293, + "TP": 74, + "n_pred": 76, + "n_ref": 105 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient021_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient021_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8939051918735892, + "FN": 148, + "FP": 40, + "IoU": 0.8081632653061225, + "TN": 5420, + "TP": 792, + "n_pred": 832, + "n_ref": 940 + }, + "3": { + "Dice": 0.9796320630749015, + "FN": 17, + "FP": 45, + "IoU": 0.9600772698003863, + "TN": 4847, + "TP": 1491, + "n_pred": 1536, + "n_ref": 1508 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient024_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient024_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 8, + "FP": 0, + "IoU": 0.0, + "TN": 6392, + "TP": 0, + "n_pred": 0, + "n_ref": 8 + }, + "2": { + "Dice": 0.9454713493530499, + "FN": 123, + "FP": 113, + "IoU": 0.8965819456617002, + "TN": 4118, + "TP": 2046, + "n_pred": 2159, + "n_ref": 2169 + }, + "3": { + "Dice": 0.9755483638978785, + "FN": 78, + "FP": 58, + "IoU": 0.9522639522639522, + "TN": 3551, + "TP": 2713, + "n_pred": 2771, + "n_ref": 2791 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient026_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient026_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 43, + "IoU": 0.0, + "TN": 19157, + "TP": 0, + "n_pred": 43, + "n_ref": 0 + }, + "2": { + "Dice": 0.9469469469469469, + "FN": 101, + "FP": 111, + "IoU": 0.8992395437262357, + "TN": 17096, + "TP": 1892, + "n_pred": 2003, + "n_ref": 1993 + }, + "3": { + "Dice": 0.9020771513353115, + "FN": 18, + "FP": 81, + "IoU": 0.8216216216216217, + "TN": 18645, + "TP": 456, + "n_pred": 537, + "n_ref": 474 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient030_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient030_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8001188001188001, + "FN": 673, + "FP": 0, + "IoU": 0.6668316831683169, + "TN": 4380, + "TP": 1347, + "n_pred": 1347, + "n_ref": 2020 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient046_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient046_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.6799468791500664, + "FN": 72, + "FP": 169, + "IoU": 0.5150905432595574, + "TN": 12303, + "TP": 256, + "n_pred": 425, + "n_ref": 328 + }, + "2": { + "Dice": 0.66, + "FN": 38, + "FP": 30, + "IoU": 0.4925373134328358, + "TN": 12666, + "TP": 66, + "n_pred": 96, + "n_ref": 104 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient047_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient047_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient054_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient054_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 21, + "IoU": 0.0, + "TN": 6379, + "TP": 0, + "n_pred": 21, + "n_ref": 0 + }, + "2": { + "Dice": 0.9012567324955116, + "FN": 176, + "FP": 44, + "IoU": 0.8202614379084967, + "TN": 5176, + "TP": 1004, + "n_pred": 1048, + "n_ref": 1180 + }, + "3": { + "Dice": 0.8068181818181818, + "FN": 2, + "FP": 134, + "IoU": 0.6761904761904762, + "TN": 5980, + "TP": 284, + "n_pred": 418, + "n_ref": 286 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient063_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient063_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9246456105446407, + "FN": 265, + "FP": 38, + "IoU": 0.8598519888991675, + "TN": 4238, + "TP": 1859, + "n_pred": 1897, + "n_ref": 2124 + }, + "2": { + "Dice": 0.8975609756097561, + "FN": 33, + "FP": 51, + "IoU": 0.8141592920353983, + "TN": 5948, + "TP": 368, + "n_pred": 419, + "n_ref": 401 + }, + "3": { + "Dice": 0.7955801104972375, + "FN": 37, + "FP": 0, + "IoU": 0.6605504587155964, + "TN": 6291, + "TP": 72, + "n_pred": 72, + "n_ref": 109 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient066_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient066_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 0, + "FP": 4, + "IoU": 0.0, + "TN": 6396, + "TP": 0, + "n_pred": 4, + "n_ref": 0 + }, + "2": { + "Dice": 0.8806306306306306, + "FN": 4, + "FP": 102, + "IoU": 0.7867203219315896, + "TN": 5903, + "TP": 391, + "n_pred": 493, + "n_ref": 395 + }, + "3": { + "Dice": 0.9480614484272128, + "FN": 69, + "FP": 2, + "IoU": 0.9012517385257302, + "TN": 5681, + "TP": 648, + "n_pred": 650, + "n_ref": 717 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient069_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient069_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9062837733518604, + "FN": 418, + "FP": 189, + "IoU": 0.8286278938452851, + "TN": 9258, + "TP": 2935, + "n_pred": 3124, + "n_ref": 3353 + }, + "2": { + "Dice": 0.8885496183206106, + "FN": 185, + "FP": 180, + "IoU": 0.7994505494505495, + "TN": 10980, + "TP": 1455, + "n_pred": 1635, + "n_ref": 1640 + }, + "3": { + "Dice": 0.9572894297303746, + "FN": 11, + "FP": 168, + "IoU": 0.9180778032036613, + "TN": 10615, + "TP": 2006, + "n_pred": 2174, + "n_ref": 2017 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient072_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient072_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.3488372093023256, + "FN": 16, + "FP": 40, + "IoU": 0.2112676056338028, + "TN": 12729, + "TP": 15, + "n_pred": 55, + "n_ref": 31 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient077_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient077_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8974205158968206, + "FN": 25, + "FP": 488, + "IoU": 0.8139281828073993, + "TN": 10043, + "TP": 2244, + "n_pred": 2732, + "n_ref": 2269 + }, + "2": { + "Dice": 0.8550503509307293, + "FN": 446, + "FP": 29, + "IoU": 0.7468017057569296, + "TN": 10924, + "TP": 1401, + "n_pred": 1430, + "n_ref": 1847 + }, + "3": { + "Dice": 0.8415584415584415, + "FN": 13, + "FP": 231, + "IoU": 0.726457399103139, + "TN": 11908, + "TP": 648, + "n_pred": 879, + "n_ref": 661 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient079_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient079_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.1148936170212766, + "FN": 665, + "FP": 167, + "IoU": 0.060948081264108354, + "TN": 11914, + "TP": 54, + "n_pred": 221, + "n_ref": 719 + }, + "2": { + "Dice": 0.7607209446861405, + "FN": 224, + "FP": 161, + "IoU": 0.6138415245737212, + "TN": 11803, + "TP": 612, + "n_pred": 773, + "n_ref": 836 + }, + "3": { + "Dice": 0.9419130434782609, + "FN": 164, + "FP": 3, + "IoU": 0.8902038132807364, + "TN": 11279, + "TP": 1354, + "n_pred": 1357, + "n_ref": 1518 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient088_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient088_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_3/validation/patient092_frame06.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient092_frame06.nii.gz" + } + ] + }, + "fold_4": { + "foreground_mean": { + "Dice": 0.7842135441119863, + "FN": 40.877192982456144, + "FP": 26.298245614035093, + "IoU": 0.7138541049430388, + "TN": 8277.526315789473, + "TP": 413.1929824561403, + "n_pred": 439.4912280701754, + "n_ref": 454.07017543859655 + }, + "mean": { + "1": { + "Dice": 0.7126992914707823, + "FN": 44.36842105263158, + "FP": 12.210526315789474, + "IoU": 0.6392560633618893, + "TN": 8303.78947368421, + "TP": 397.5263157894737, + "n_pred": 409.7368421052632, + "n_ref": 441.89473684210526 + }, + "2": { + "Dice": 0.7953921404880359, + "FN": 51.10526315789474, + "FP": 55.0, + "IoU": 0.7037743937411994, + "TN": 8267.21052631579, + "TP": 384.57894736842104, + "n_pred": 439.57894736842104, + "n_ref": 435.6842105263158 + }, + "3": { + "Dice": 0.8445492003771407, + "FN": 27.157894736842106, + "FP": 11.68421052631579, + "IoU": 0.7985318577260276, + "TN": 8261.578947368422, + "TP": 457.4736842105263, + "n_pred": 469.1578947368421, + "n_ref": 484.63157894736844 + } + }, + "metric_per_case": [ + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.84, + "FN": 95, + "FP": 81, + "IoU": 0.7241379310344828, + "TN": 12162, + "TP": 462, + "n_pred": 543, + "n_ref": 557 + }, + "3": { + "Dice": 0.8556701030927835, + "FN": 56, + "FP": 0, + "IoU": 0.7477477477477478, + "TN": 12578, + "TP": 166, + "n_pred": 166, + "n_ref": 222 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient002_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient002_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8662486938349008, + "FN": 81, + "FP": 175, + "IoU": 0.7640552995391705, + "TN": 11715, + "TP": 829, + "n_pred": 1004, + "n_ref": 910 + }, + "3": { + "Dice": 0.9751111111111112, + "FN": 52, + "FP": 60, + "IoU": 0.9514310494362532, + "TN": 10494, + "TP": 2194, + "n_pred": 2254, + "n_ref": 2246 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient006_frame16.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient006_frame16.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.9076411960132891, + "FN": 37, + "FP": 102, + "IoU": 0.8309002433090025, + "TN": 11978, + "TP": 683, + "n_pred": 785, + "n_ref": 720 + }, + "3": { + "Dice": 0.9206066012488849, + "FN": 71, + "FP": 18, + "IoU": 0.8528925619834711, + "TN": 12195, + "TP": 516, + "n_pred": 534, + "n_ref": 587 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient008_frame13.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient008_frame13.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.325, + "FN": 108, + "FP": 0, + "IoU": 0.19402985074626866, + "TN": 6266, + "TP": 26, + "n_pred": 26, + "n_ref": 134 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient009_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient009_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8832540940306391, + "FN": 164, + "FP": 57, + "IoU": 0.7909176915799432, + "TN": 5343, + "TP": 836, + "n_pred": 893, + "n_ref": 1000 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient016_frame12.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient016_frame12.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.9736070381231672, + "FN": 82, + "FP": 17, + "IoU": 0.9485714285714286, + "TN": 4475, + "TP": 1826, + "n_pred": 1843, + "n_ref": 1908 + }, + "2": { + "Dice": 0.8893766461808604, + "FN": 43, + "FP": 209, + "IoU": 0.8007905138339921, + "TN": 5135, + "TP": 1013, + "n_pred": 1222, + "n_ref": 1056 + }, + "3": { + "Dice": 0.9714677014380279, + "FN": 88, + "FP": 37, + "IoU": 0.9445184198845983, + "TN": 4147, + "TP": 2128, + "n_pred": 2165, + "n_ref": 2216 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient018_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient018_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient022_frame11.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient022_frame11.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient025_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient025_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8611111111111112, + "FN": 10, + "FP": 40, + "IoU": 0.7560975609756098, + "TN": 6195, + "TP": 155, + "n_pred": 195, + "n_ref": 165 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient043_frame07.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient043_frame07.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient064_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient064_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.7486033519553073, + "FN": 90, + "FP": 0, + "IoU": 0.5982142857142857, + "TN": 12576, + "TP": 134, + "n_pred": 134, + "n_ref": 224 + }, + "2": { + "Dice": 0.8303030303030303, + "FN": 19, + "FP": 149, + "IoU": 0.7098445595854922, + "TN": 12221, + "TP": 411, + "n_pred": 560, + "n_ref": 430 + }, + "3": { + "Dice": 0.9819600195026816, + "FN": 19, + "FP": 18, + "IoU": 0.9645593869731801, + "TN": 11756, + "TP": 1007, + "n_pred": 1025, + "n_ref": 1026 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient068_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient068_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient073_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.930780559646539, + "FN": 76, + "FP": 65, + "IoU": 0.8705234159779615, + "TN": 11711, + "TP": 948, + "n_pred": 1013, + "n_ref": 1024 + }, + "2": { + "Dice": 0.9036544850498339, + "FN": 80, + "FP": 152, + "IoU": 0.8242424242424242, + "TN": 11480, + "TP": 1088, + "n_pred": 1240, + "n_ref": 1168 + }, + "3": { + "Dice": 0.8693284936479129, + "FN": 137, + "FP": 7, + "IoU": 0.7688603531300161, + "TN": 12177, + "TP": 479, + "n_pred": 486, + "n_ref": 616 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient073_frame10.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient073_frame10.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.8716707021791767, + "FN": 16, + "FP": 37, + "IoU": 0.7725321888412017, + "TN": 6167, + "TP": 180, + "n_pred": 217, + "n_ref": 196 + }, + "2": { + "Dice": 0.8800300864986838, + "FN": 286, + "FP": 33, + "IoU": 0.7857622565480188, + "TN": 4911, + "TP": 1170, + "n_pred": 1203, + "n_ref": 1456 + }, + "3": { + "Dice": 0.9293286219081273, + "FN": 33, + "FP": 7, + "IoU": 0.8679867986798679, + "TN": 6097, + "TP": 263, + "n_pred": 270, + "n_ref": 296 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient078_frame09.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient078_frame09.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.88107202680067, + "FN": 120, + "FP": 22, + "IoU": 0.7874251497005988, + "TN": 5732, + "TP": 526, + "n_pred": 548, + "n_ref": 646 + }, + "3": { + "Dice": 0.9688888888888889, + "FN": 20, + "FP": 8, + "IoU": 0.9396551724137931, + "TN": 5936, + "TP": 436, + "n_pred": 444, + "n_ref": 456 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient079_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient079_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 6400, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": 0.8904632152588556, + "FN": 153, + "FP": 48, + "IoU": 0.8025540275049116, + "TN": 5382, + "TP": 817, + "n_pred": 865, + "n_ref": 970 + }, + "3": { + "Dice": 0.973130462932988, + "FN": 16, + "FP": 67, + "IoU": 0.9476670870113493, + "TN": 4814, + "TP": 1503, + "n_pred": 1570, + "n_ref": 1519 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient080_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient080_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.968678585831429, + "FN": 177, + "FP": 56, + "IoU": 0.9392596454640251, + "TN": 8964, + "TP": 3603, + "n_pred": 3659, + "n_ref": 3780 + }, + "2": { + "Dice": 0.0, + "FN": 0, + "FP": 2, + "IoU": 0.0, + "TN": 12798, + "TP": 0, + "n_pred": 2, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient083_frame08.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient083_frame08.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": 0.0, + "FN": 130, + "FP": 0, + "IoU": 0.0, + "TN": 6270, + "TP": 0, + "n_pred": 0, + "n_ref": 130 + }, + "2": { + "Dice": 0.7948051948051948, + "FN": 47, + "FP": 32, + "IoU": 0.6594827586206896, + "TN": 6168, + "TP": 153, + "n_pred": 185, + "n_ref": 200 + }, + "3": { + "Dice": 0.0, + "FN": 24, + "FP": 0, + "IoU": 0.0, + "TN": 6376, + "TP": 0, + "n_pred": 0, + "n_ref": 24 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient091_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient091_frame01.nii.gz" + }, + { + "metrics": { + "1": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "2": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + }, + "3": { + "Dice": NaN, + "FN": 0, + "FP": 0, + "IoU": NaN, + "TN": 12800, + "TP": 0, + "n_pred": 0, + "n_ref": 0 + } + }, + "prediction_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_results/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/nnActiveTrainer_200epochs__nnUNetPlans__3d_fullres/fold_4/validation/patient100_frame01.nii.gz", + "reference_file": "/scratch/slurm_tmpdir/job_3235737/nnActive_data/Dataset027_ACDC/nnUNet_preprocessed/Dataset5112_ACDC__patch-4_40_40__sb-random-label2-all-classes__sbs-30__qs-30__unc-class_power_pe66__seed-12348/gt_segmentations/patient100_frame01.nii.gz" + } + ] + }, + "mean": { + "foreground_mean": { + "Dice": 0.7734496132888328, + "FN": 89.28543859649123, + "FP": 79.20684210526315, + "IoU": 0.6932431378932327, + "TN": 8977.71403508772, + "TP": 746.8463157894736, + "n_pred": 826.0531578947368, + "n_ref": 836.131754385965 + }, + "mean": { + "1": { + "Dice": 0.6425141745219773, + "FN": 98.18210526315788, + "FP": 96.46263157894738, + "IoU": 0.5517803310091145, + "TN": 9119.892105263158, + "TP": 578.5157894736842, + "n_pred": 674.9784210526316, + "n_ref": 676.697894736842 + }, + "2": { + "Dice": 0.8179946771267568, + "FN": 119.30631578947369, + "FP": 92.69736842105263, + "IoU": 0.7162936053684958, + "TN": 9011.874736842106, + "TP": 669.1742105263156, + "n_pred": 761.8715789473683, + "n_ref": 788.4805263157893 + }, + "3": { + "Dice": 0.8598399882177642, + "FN": 50.36789473684211, + "FP": 48.46052631578947, + "IoU": 0.8116554773020876, + "TN": 8801.375263157894, + "TP": 992.848947368421, + "n_pred": 1041.3094736842104, + "n_ref": 1043.2168421052631 + } + } + } +} \ No newline at end of file