{ "bundle_format": 1, "model_version": "scibert-uniform-negatives-s21-7dc7a1893e", "system": "span-relation", "preprocessing_version": "neural-1", "neural_config": { "neural_version": "1", "encoder": "scibert", "freeze_encoder": false, "max_span_words": 10, "width_embedding_dim": 25, "type_embedding_dim": 25, "distance_embedding_dim": 25, "use_type_features": true, "use_distance_features": true, "dropout": 0.1, "negative_spans": 100, "negative_pairs": 100, "hard_negatives": false, "learning_rate": 2e-05, "head_learning_rate": 0.001, "weight_decay": 0.01, "warmup_fraction": 0.1, "batch_size": 16, "grad_accumulation": 1, "epochs": 10, "patience": 3, "relation_threshold": 0.5, "restrict_type_pairs": true, "max_subwords": 510, "seed": 21, "mixed_precision": true }, "entity_labels": [ "Action", "Amount", "Concentration", "Device", "Generic-Measure", "Location", "Measure-Type", "Mention", "Method", "Modifier", "Numerical", "Reagent", "Seal", "Size", "Speed", "Temperature", "Time", "pH" ], "relation_labels": [ "Acts-on", "Commands", "Coreference-Link", "Count", "Measure", "Measure-Type-Link", "Meronym", "Mod-Link", "Of-Type", "Or", "Product", "Setting", "Site", "Using" ], "type_pairs": [ [ "Action", "Action" ], [ "Action", "Amount" ], [ "Action", "Concentration" ], [ "Action", "Device" ], [ "Action", "Generic-Measure" ], [ "Action", "Location" ], [ "Action", "Measure-Type" ], [ "Action", "Mention" ], [ "Action", "Method" ], [ "Action", "Modifier" ], [ "Action", "Numerical" ], [ "Action", "Reagent" ], [ "Action", "Seal" ], [ "Action", "Size" ], [ "Action", "Speed" ], [ "Action", "Temperature" ], [ "Action", "Time" ], [ "Action", "pH" ], [ "Amount", "Amount" ], [ "Amount", "Mention" ], [ "Amount", "Modifier" ], [ "Amount", "Numerical" ], [ "Amount", "Reagent" ], [ "Concentration", "Concentration" ], [ "Concentration", "Modifier" ], [ "Concentration", "Reagent" ], [ "Device", "Amount" ], [ "Device", "Concentration" ], [ "Device", "Device" ], [ "Device", "Generic-Measure" ], [ "Device", "Location" ], [ "Device", "Method" ], [ "Device", "Modifier" ], [ "Device", "Numerical" ], [ "Device", "Reagent" ], [ "Device", "Size" ], [ "Device", "Speed" ], [ "Device", "Temperature" ], [ "Device", "Time" ], [ "Generic-Measure", "Generic-Measure" ], [ "Generic-Measure", "Measure-Type" ], [ "Generic-Measure", "Modifier" ], [ "Location", "Amount" ], [ "Location", "Concentration" ], [ "Location", "Device" ], [ "Location", "Generic-Measure" ], [ "Location", "Location" ], [ "Location", "Mention" ], [ "Location", "Modifier" ], [ "Location", "Numerical" ], [ "Location", "Reagent" ], [ "Location", "Seal" ], [ "Location", "Size" ], [ "Location", "Temperature" ], [ "Location", "Time" ], [ "Measure-Type", "Amount" ], [ "Measure-Type", "Measure-Type" ], [ "Measure-Type", "Modifier" ], [ "Measure-Type", "Reagent" ], [ "Mention", "Action" ], [ "Mention", "Amount" ], [ "Mention", "Concentration" ], [ "Mention", "Device" ], [ "Mention", "Generic-Measure" ], [ "Mention", "Location" ], [ "Mention", "Mention" ], [ "Mention", "Modifier" ], [ "Mention", "Numerical" ], [ "Mention", "Reagent" ], [ "Mention", "pH" ], [ "Method", "Device" ], [ "Method", "Method" ], [ "Method", "Modifier" ], [ "Modifier", "Amount" ], [ "Modifier", "Generic-Measure" ], [ "Modifier", "Location" ], [ "Modifier", "Modifier" ], [ "Modifier", "Numerical" ], [ "Modifier", "Reagent" ], [ "Modifier", "Size" ], [ "Modifier", "Speed" ], [ "Modifier", "Temperature" ], [ "Modifier", "Time" ], [ "Numerical", "Measure-Type" ], [ "Numerical", "Modifier" ], [ "Numerical", "Numerical" ], [ "Reagent", "Amount" ], [ "Reagent", "Concentration" ], [ "Reagent", "Device" ], [ "Reagent", "Generic-Measure" ], [ "Reagent", "Location" ], [ "Reagent", "Measure-Type" ], [ "Reagent", "Mention" ], [ "Reagent", "Modifier" ], [ "Reagent", "Numerical" ], [ "Reagent", "Reagent" ], [ "Reagent", "Seal" ], [ "Reagent", "Size" ], [ "Reagent", "pH" ], [ "Seal", "Device" ], [ "Seal", "Location" ], [ "Seal", "Mention" ], [ "Seal", "Modifier" ], [ "Seal", "Numerical" ], [ "Seal", "Seal" ], [ "Seal", "Size" ], [ "Size", "Modifier" ], [ "Size", "Size" ], [ "Speed", "Modifier" ], [ "Speed", "Speed" ], [ "Temperature", "Modifier" ], [ "Temperature", "Temperature" ], [ "Time", "Modifier" ], [ "Time", "Time" ], [ "pH", "Modifier" ] ], "hidden_size": 768, "files": { "encoder/config.json": { "path": "encoder/config.json", "sha256": "4d08a96f73e258cd3fb48598f5ff887f402c9153a1101034b78b639bd49b2e6a" }, "model.safetensors": { "path": "model.safetensors", "sha256": "117953d1d93aa6b737aba2b118b28efcc81112410d71c8dd887125da7048821a" }, "tokenizer/tokenizer.json": { "path": "tokenizer/tokenizer.json", "sha256": "7d7f7f94ebc356bfdbfd1fc2dde4d5a9a15d24dc9dd38c642b6392e8c6cb7462" }, "tokenizer/tokenizer_config.json": { "path": "tokenizer/tokenizer_config.json", "sha256": "4462f2399527c65c2eaaa75bf548f35fd0bf321f28c2d48e52b409767b6f4c86" } }, "runtime": { "protocolledger": "0.0.1", "python": "3.12.6", "torch": "2.14.1" }, "training": { "run": "scibert-uniform-negatives-s21", "report": "reports/neural/scibert-uniform-negatives-s21-dev.json", "report_sha256": "d5a7a9e3363ab14ea1f31f542f4f940817d51e75de60e323c27b56a45c177d18", "checkpoint_sha256": "7dc7a1893e1567293c27922ef25966e9ef9c6627a1f71ef386e8c0736b5513b7", "best_epoch": 9, "encoder": "allenai/scibert_scivocab_cased", "encoder_revision": "ddf0be025f8e432a1870e34811997ba6725bf04a", "splits_manifest_sha256": "e0136ae42662b7857cad7b25d4dc56a01eca4808b98e0544974624b0d1d1710c", "code_commit": "95b2d5c2124e3f9146653dc78005d423b3df8d2a" }, "evaluation": { "split": "dev", "device": "cpu", "entity_f1": 0.8003, "relation_f1_end_to_end": 0.6389, "reported_gpu": { "entity_f1": 0.8003, "relation_f1_end_to_end": 0.6389 } } }