{ "category": "docking", "benchmarks": [ { "name": "DOCKING_P53_APRIL_VINA_AFFINITY_BOUNDED", "category": "docking", "description": "Redocking a ligand to p53 DNA-binding domain must produce a finite binding affinity within a sane range.", "input": { "target": "P04637 DBD", "engine": "AutoDock Vina" }, "section": "docking", "expected_output": { "affinity_kcal_mol_bounded": true }, "tolerance": { "affinity_kcal_mol_bounded": 0 }, "ground_truth": "AutoDock Vina affinities for organic ligands are typically -4 to -12 kcal/mol.", "citation": "Trott O., Olson A.J. J. Comput. Chem. 2010 (AutoDock Vina).", "source": "AutoDock Vina", "stage": "curated", "difficulty": "medium", "version": 1 } ] }