{
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  "checkpoint_sha256": "4228704493c9da794ed7be5c6f98194f36eeb7c05d9ed618f69109091cf2a537",
  "stage2_checkpoint_sha256": "130d8c61ca9607827c220e1e51b6d5a6a49deac0f66c0178302303545ffd944c",
  "gene_space_sha256": "87ac6eb3e95da658e2993ea54b8043f4bb60604fa48100aeea8697c4b84bd938",
  "cache_fingerprint": "b8f5acc5c0956c2661fe021d06a42404b424a7e7fe45923c9c35b4a5aa41a1fe",
  "retrieval_method": "cluster_retrieval",
  "K": 50,
  "tau": 0.03,
  "target_size": 100,
  "reference_objects": [
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    "120",
    "221",
    "222",
    "231",
    "232",
    "242",
    "COAD",
    "HCC",
    "OV",
    "TID1_scene2",
    "TID1_scene3",
    "TID1_scene4",
    "benchmark_ovary_io_Xenium_V1_Human_Ovarian_Cancer_Addon_FFPE",
    "bone_bone_marrow_bone_bone_marrow_xenium_Xenium_V1_hBoneMarrow_acute_lymphoid_leukemia_section",
    "bone_bone_marrow_bone_bone_marrow_xenium_Xenium_V1_hBoneMarrow_nondiseased_section",
    "bone_bone_marrow_bone_bone_marrow_xenium_Xenium_V1_hBone_nondiseased_section",
    "breast_cancer_sample3_xenium_Xenium_V1_FFPE_Human_Breast_IDC_With_Addon",
    "breast_cancer_sample4_xenium_Xenium_V1_FFPE_Human_Breast_IDC_With_Addon",
    "breast_cancer_sample5_xenium_Xenium_V1_FFPE_Human_Breast_ILC_With_Addon",
    "breast_cancer_sample6_xenium_Xenium_V1_FFPE_Human_Breast_IDC",
    "breast_cancer_sample7_xenium_Xenium_V1_FFPE_Human_Breast_ILC",
    "breast_cancer_sample8_xenium_replicate1_Xenium_V1_FFPE_Human_Breast_IDC_Big_1",
    "breast_cancer_sample8_xenium_replicate2_Xenium_V1_FFPE_Human_Breast_IDC_Big_2",
    "cervilla_Breast",
    "colon_cancer_addon",
    "colon_colon_preview_xenium_Xenium_V1_hColon_Non_diseased_Base_FFPE",
    "colorectal_cancer_colorectal_cancer_xenium_Xenium_V1_Human_Colorectal_Cancer_Addon_FFPE",
    "heart_heart_sample1_xenium_Xenium_V1_hHeart_nondiseased_section_FFPE",
    "hest_NCBI856",
    "hest_NCBI857",
    "hest_NCBI860",
    "hest_NCBI861",
    "hest_NCBI864",
    "hest_NCBI865",
    "hest_NCBI867",
    "hest_NCBI870",
    "hest_NCBI881",
    "hest_NCBI882",
    "hest_NCBI885",
    "hest_NCBI886",
    "hest_NCBI887",
    "hest_NCBI888",
    "hest_TENX115",
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    "hest_TENX141",
    "hest_TENX147",
    "hest_TENX148",
    "hest_TENX149",
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    "hest_TENX199",
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    "hest_TENX201",
    "hest_TENX202",
    "kidney_kidney_preview_xenium_Xenium_V1_hKidney_nondiseased_section",
    "kidney_protein",
    "liver_liver_xenium_Xenium_V1_hLiver_cancer_section_FFPE",
    "liver_liver_xenium_Xenium_V1_hLiver_nondiseased_section_FFPE",
    "lung_cancer_lung_cancer_post_xenium_technote_Xenium_V1_Human_Lung_Cancer_FFPE",
    "lung_prime",
    "lymph_node_prime",
    "ovary_ovary_cross_platform_fresh_frozen_xenium_Xenium_V1_Human_Ovary_Cancer_FF",
    "ovary_prime_cancer_ff",
    "pancreas_pancreas_multimodal_xenium_Xenium_V1_human_Pancreas_FFPE",
    "pancreas_pancreatic_cancer_xenium_Xenium_V1_hPancreas_Cancer_Add_on_FFPE",
    "prostate_prostate_prime_ffpe_xenium_Xenium_Prime_Human_Prostate_FFPE",
    "skin_skin_normal_xenium_Xenium_V1_hSkin_nondiseased_section_1_FFPE",
    "skin_skin_normal_xenium_Xenium_V1_hSkin_nondiseased_section_2_FFPE",
    "tonsil_follicular",
    "tonsil_reactive"
  ],
  "reference_exclusions": {
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      "110"
    ],
    "120": [
      "120"
    ],
    "221": [
      "221"
    ],
    "222": [
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    "231": [
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    "232": [
      "232"
    ],
    "242": [
      "242"
    ],
    "COAD": [
      "COAD"
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    "HCC": [
      "HCC"
    ],
    "OV": [
      "OV"
    ],
    "TID1_scene2": [
      "TID1_scene2"
    ],
    "TID1_scene3": [
      "TID1_scene3"
    ],
    "TID1_scene4": [
      "TID1_scene4"
    ],
    "benchmark_ovary_io_Xenium_V1_Human_Ovarian_Cancer_Addon_FFPE": [
      "benchmark_ovary_io_Xenium_V1_Human_Ovarian_Cancer_Addon_FFPE"
    ],
    "bone_bone_marrow_bone_bone_marrow_xenium_Xenium_V1_hBoneMarrow_acute_lymphoid_leukemia_section": [
      "bone_bone_marrow_bone_bone_marrow_xenium_Xenium_V1_hBoneMarrow_acute_lymphoid_leukemia_section"
    ],
    "bone_bone_marrow_bone_bone_marrow_xenium_Xenium_V1_hBoneMarrow_nondiseased_section": [
      "bone_bone_marrow_bone_bone_marrow_xenium_Xenium_V1_hBoneMarrow_nondiseased_section"
    ],
    "bone_bone_marrow_bone_bone_marrow_xenium_Xenium_V1_hBone_nondiseased_section": [
      "bone_bone_marrow_bone_bone_marrow_xenium_Xenium_V1_hBone_nondiseased_section"
    ],
    "breast_cancer_sample3_xenium_Xenium_V1_FFPE_Human_Breast_IDC_With_Addon": [
      "breast_cancer_sample3_xenium_Xenium_V1_FFPE_Human_Breast_IDC_With_Addon"
    ],
    "breast_cancer_sample4_xenium_Xenium_V1_FFPE_Human_Breast_IDC_With_Addon": [
      "breast_cancer_sample4_xenium_Xenium_V1_FFPE_Human_Breast_IDC_With_Addon"
    ],
    "breast_cancer_sample5_xenium_Xenium_V1_FFPE_Human_Breast_ILC_With_Addon": [
      "breast_cancer_sample5_xenium_Xenium_V1_FFPE_Human_Breast_ILC_With_Addon"
    ],
    "breast_cancer_sample6_xenium_Xenium_V1_FFPE_Human_Breast_IDC": [
      "breast_cancer_sample6_xenium_Xenium_V1_FFPE_Human_Breast_IDC"
    ],
    "breast_cancer_sample7_xenium_Xenium_V1_FFPE_Human_Breast_ILC": [
      "breast_cancer_sample7_xenium_Xenium_V1_FFPE_Human_Breast_ILC"
    ],
    "breast_cancer_sample8_xenium_replicate1_Xenium_V1_FFPE_Human_Breast_IDC_Big_1": [
      "breast_cancer_sample8_xenium_replicate1_Xenium_V1_FFPE_Human_Breast_IDC_Big_1",
      "breast_cancer_sample8_xenium_replicate2_Xenium_V1_FFPE_Human_Breast_IDC_Big_2"
    ],
    "breast_cancer_sample8_xenium_replicate2_Xenium_V1_FFPE_Human_Breast_IDC_Big_2": [
      "breast_cancer_sample8_xenium_replicate1_Xenium_V1_FFPE_Human_Breast_IDC_Big_1",
      "breast_cancer_sample8_xenium_replicate2_Xenium_V1_FFPE_Human_Breast_IDC_Big_2"
    ],
    "cervilla_Breast": [
      "cervilla_Breast"
    ],
    "colon_cancer_addon": [
      "colon_cancer_addon"
    ],
    "colon_colon_preview_xenium_Xenium_V1_hColon_Non_diseased_Base_FFPE": [
      "colon_colon_preview_xenium_Xenium_V1_hColon_Non_diseased_Base_FFPE"
    ],
    "colorectal_cancer_colorectal_cancer_xenium_Xenium_V1_Human_Colorectal_Cancer_Addon_FFPE": [
      "colorectal_cancer_colorectal_cancer_xenium_Xenium_V1_Human_Colorectal_Cancer_Addon_FFPE"
    ],
    "heart_heart_sample1_xenium_Xenium_V1_hHeart_nondiseased_section_FFPE": [
      "heart_heart_sample1_xenium_Xenium_V1_hHeart_nondiseased_section_FFPE"
    ],
    "hest_NCBI856": [
      "hest_NCBI856",
      "hest_NCBI857"
    ],
    "hest_NCBI857": [
      "hest_NCBI856",
      "hest_NCBI857"
    ],
    "hest_NCBI860": [
      "hest_NCBI860",
      "hest_NCBI861"
    ],
    "hest_NCBI861": [
      "hest_NCBI860",
      "hest_NCBI861"
    ],
    "hest_NCBI864": [
      "hest_NCBI864"
    ],
    "hest_NCBI865": [
      "hest_NCBI865"
    ],
    "hest_NCBI867": [
      "hest_NCBI867"
    ],
    "hest_NCBI870": [
      "hest_NCBI870"
    ],
    "hest_NCBI881": [
      "hest_NCBI881",
      "hest_NCBI882"
    ],
    "hest_NCBI882": [
      "hest_NCBI881",
      "hest_NCBI882"
    ],
    "hest_NCBI885": [
      "hest_NCBI885"
    ],
    "hest_NCBI886": [
      "hest_NCBI886",
      "hest_NCBI887"
    ],
    "hest_NCBI887": [
      "hest_NCBI886",
      "hest_NCBI887"
    ],
    "hest_NCBI888": [
      "hest_NCBI888"
    ],
    "hest_TENX115": [
      "hest_TENX115"
    ],
    "hest_TENX138": [
      "hest_TENX138"
    ],
    "hest_TENX141": [
      "hest_TENX141"
    ],
    "hest_TENX147": [
      "hest_TENX147"
    ],
    "hest_TENX148": [
      "hest_TENX148"
    ],
    "hest_TENX149": [
      "hest_TENX149"
    ],
    "hest_TENX158": [
      "hest_TENX158"
    ],
    "hest_TENX188": [
      "hest_TENX188"
    ],
    "hest_TENX191": [
      "hest_TENX191",
      "hest_TENX192",
      "hest_TENX193"
    ],
    "hest_TENX192": [
      "hest_TENX191",
      "hest_TENX192",
      "hest_TENX193"
    ],
    "hest_TENX193": [
      "hest_TENX191",
      "hest_TENX192",
      "hest_TENX193"
    ],
    "hest_TENX194": [
      "hest_TENX194",
      "hest_TENX195",
      "hest_TENX196"
    ],
    "hest_TENX195": [
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      "hest_TENX195",
      "hest_TENX196"
    ],
    "hest_TENX196": [
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      "hest_TENX195",
      "hest_TENX196"
    ],
    "hest_TENX197": [
      "hest_TENX197",
      "hest_TENX198",
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    ],
    "hest_TENX198": [
      "hest_TENX197",
      "hest_TENX198",
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    ],
    "hest_TENX199": [
      "hest_TENX197",
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    ],
    "hest_TENX200": [
      "hest_TENX200",
      "hest_TENX201",
      "hest_TENX202"
    ],
    "hest_TENX201": [
      "hest_TENX200",
      "hest_TENX201",
      "hest_TENX202"
    ],
    "hest_TENX202": [
      "hest_TENX200",
      "hest_TENX201",
      "hest_TENX202"
    ],
    "kidney_kidney_preview_xenium_Xenium_V1_hKidney_nondiseased_section": [
      "kidney_kidney_preview_xenium_Xenium_V1_hKidney_nondiseased_section"
    ],
    "kidney_protein": [
      "kidney_protein"
    ],
    "liver_liver_xenium_Xenium_V1_hLiver_cancer_section_FFPE": [
      "liver_liver_xenium_Xenium_V1_hLiver_cancer_section_FFPE"
    ],
    "liver_liver_xenium_Xenium_V1_hLiver_nondiseased_section_FFPE": [
      "liver_liver_xenium_Xenium_V1_hLiver_nondiseased_section_FFPE"
    ],
    "lung_cancer_lung_cancer_post_xenium_technote_Xenium_V1_Human_Lung_Cancer_FFPE": [
      "lung_cancer_lung_cancer_post_xenium_technote_Xenium_V1_Human_Lung_Cancer_FFPE"
    ],
    "lung_prime": [
      "lung_prime"
    ],
    "lymph_node_prime": [
      "lymph_node_prime"
    ],
    "ovary_ovary_cross_platform_fresh_frozen_xenium_Xenium_V1_Human_Ovary_Cancer_FF": [
      "ovary_ovary_cross_platform_fresh_frozen_xenium_Xenium_V1_Human_Ovary_Cancer_FF",
      "ovary_prime_cancer_ff"
    ],
    "ovary_prime_cancer_ff": [
      "ovary_ovary_cross_platform_fresh_frozen_xenium_Xenium_V1_Human_Ovary_Cancer_FF",
      "ovary_prime_cancer_ff"
    ],
    "pancreas_pancreas_multimodal_xenium_Xenium_V1_human_Pancreas_FFPE": [
      "pancreas_pancreas_multimodal_xenium_Xenium_V1_human_Pancreas_FFPE"
    ],
    "pancreas_pancreatic_cancer_xenium_Xenium_V1_hPancreas_Cancer_Add_on_FFPE": [
      "pancreas_pancreatic_cancer_xenium_Xenium_V1_hPancreas_Cancer_Add_on_FFPE"
    ],
    "prostate_prostate_prime_ffpe_xenium_Xenium_Prime_Human_Prostate_FFPE": [
      "prostate_prostate_prime_ffpe_xenium_Xenium_Prime_Human_Prostate_FFPE"
    ],
    "skin_skin_normal_xenium_Xenium_V1_hSkin_nondiseased_section_1_FFPE": [
      "skin_skin_normal_xenium_Xenium_V1_hSkin_nondiseased_section_1_FFPE"
    ],
    "skin_skin_normal_xenium_Xenium_V1_hSkin_nondiseased_section_2_FFPE": [
      "skin_skin_normal_xenium_Xenium_V1_hSkin_nondiseased_section_2_FFPE"
    ],
    "tonsil_follicular": [
      "tonsil_follicular"
    ],
    "tonsil_reactive": [
      "tonsil_reactive"
    ]
  },
  "R_dtype": "float32",
  "tissue_casefold": true,
  "min_refs": 1,
  "panel_cut": 1000,
  "fallback": "same_tissue"
}