Instructions to use AI4PD/REXzyme with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use AI4PD/REXzyme with Transformers:
# pip install -U transformers accelerate # Load model directly from transformers import AutoTokenizer, AutoModelForSeq2SeqLM tokenizer = AutoTokenizer.from_pretrained("AI4PD/REXzyme") model = AutoModelForSeq2SeqLM.from_pretrained("AI4PD/REXzyme", device_map="auto") - Notebooks
- Google Colab
- Kaggle
Update README.md
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README.md
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@@ -127,7 +127,7 @@ Enzymes catalyzing more than one reaction appear in multiple enzyme-reaction pai
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| Syntax | Identity | Alignment length |
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| **Generated** | 74.29% | 406.0 |
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| **Selection
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<sup>[1]|</sup> We excluded sequences with %identities ≥ 70% and pLDDTs < 60%.
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| Syntax | Identity | Alignment length |
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| :--- | :----: | ---: |
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| **Generated** | 74.29% | 406.0 |
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| **Selection** <sup>[1]|</sup> 57.20% | 338.1 |
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<br/><br/>
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<sup>[1]|</sup> We excluded sequences with %identities ≥ 70% and pLDDTs < 60%.
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