| { |
| "encoder": "prostt5", |
| "family": "hf_plm", |
| "target": "Rostlab/ProstT5", |
| "weights": "pretrained", |
| "rule": "final residue states, special tokens removed, masked mean over valid residues; amino-acid track with the <AA2fold> prefix, no 3Di input", |
| "env": "base", |
| "checkpoint": "Rostlab/ProstT5", |
| "checkpoint_revision": "d7d097d5bf9a993ab8f68488b4681d6ca70db9e5", |
| "dtype": "float16", |
| "hidden_size": 1024, |
| "n_layers": 24, |
| "n_parameters": 1208164352, |
| "inputs_passed": "amino-acid sequence only", |
| "task": "ec_classification", |
| "date": "2026-09-20 11:56", |
| "seconds": 173.2, |
| "pooling": "masked mean over all residues of the chain", |
| "manifest": "manifest/ec_classification.csv", |
| "rows": "stage1 == 1", |
| "structure_coverage": "every row has a structure file whose sequence equals the task sequence (see manifest/coverage.csv)", |
| "n_per_split": { |
| "test": 3000, |
| "train": 6000, |
| "valid": 1500 |
| }, |
| "health": { |
| "n_rows": 10500, |
| "dim": 1024, |
| "nan_values": 0, |
| "all_zero_rows": 0, |
| "distinct_rows": 8993, |
| "numerical_rank": 1024, |
| "max_abs": 1.3017895221710205 |
| }, |
| "input_audit": { |
| "rel_change_jitter_1A": 0.0, |
| "rel_change_coord_swap": 0.0, |
| "rel_change_seq_shuffle": 0.5110924480134234, |
| "rel_change_rigid_motion": 0.0, |
| "verdict": "pass" |
| } |
| } |
