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This repo is forked from [Boyuan Chen](https://boyuan.space/)'s research
template [repo](https://github.com/buoyancy99/research-template).
By its MIT license, you must keep the above sentence in `README.md`
and the `LICENSE` file to credit the author.
"""
import os
import time
from typing import (
Tuple,
List,
TYPE_CHECKING,
Any,
Literal,
Mapping,
Optional,
Union,
)
from pathlib import Path
from datetime import timedelta, datetime
from typing_extensions import override
from tqdm import tqdm
from wandb_osh.hooks import TriggerWandbSyncHook
from lightning.pytorch.loggers.wandb import (
WandbLogger,
_scan_checkpoints,
ModelCheckpoint,
Tensor,
)
from lightning.pytorch.utilities.rank_zero import rank_zero_only
from lightning.fabric.utilities.types import _PATH
import wandb
from wandb.apis.public.runs import Run
from utils.print_utils import cyan
if TYPE_CHECKING:
from wandb.sdk.lib import RunDisabled
from wandb.wandb_run import Run
class SpaceEfficientWandbLogger(WandbLogger):
"""
A wandb logger that by default overrides artifacts to save space, instead of creating new version.
A variable expiration_days can be set to control how long older versions of artifacts are kept.
By default, the latest version is kept indefinitely, while older versions are kept for 1 days.
"""
def __init__(
self,
name: Optional[str] = None,
save_dir: _PATH = ".",
version: Optional[str] = None,
offline: bool = False,
dir: Optional[_PATH] = None,
id: Optional[str] = None,
anonymous: Optional[bool] = None,
project: Optional[str] = None,
log_model: Union[Literal["all"], bool] = False,
experiment: Union["Run", "RunDisabled", None] = None,
prefix: str = "",
checkpoint_name: Optional[str] = None,
expiration_days: Optional[int] = 5,
**kwargs: Any,
) -> None:
super().__init__(
name=name,
save_dir=save_dir,
version=version,
offline=False,
dir=dir,
id=id,
anonymous=anonymous,
project=project,
log_model=log_model,
experiment=experiment,
prefix=prefix,
checkpoint_name=checkpoint_name,
**kwargs,
)
super().__init__(
name=name,
save_dir=save_dir,
version=version,
offline=offline,
dir=dir,
id=id,
anonymous=anonymous,
project=project,
log_model=log_model,
experiment=experiment,
prefix=prefix,
checkpoint_name=checkpoint_name,
**kwargs,
)
self.expiration_days = expiration_days
self._last_artifacts = []
def _scan_and_log_checkpoints(self, checkpoint_callback: ModelCheckpoint) -> None:
print("[Wandb Warrning By Haoyu]: we pass this function to avoid crash when uploading checkpoints. The checkpionts are saved to blob")
return
import wandb
# get checkpoints to be saved with associated score
checkpoints = _scan_checkpoints(checkpoint_callback, self._logged_model_time)
# log iteratively all new checkpoints
artifacts = []
for t, p, s, tag in checkpoints:
metadata = {
"score": s.item() if isinstance(s, Tensor) else s,
"original_filename": Path(p).name,
checkpoint_callback.__class__.__name__: {
k: getattr(checkpoint_callback, k)
for k in [
"monitor",
"mode",
"save_last",
"save_top_k",
"save_weights_only",
"_every_n_train_steps",
]
# ensure it does not break if `ModelCheckpoint` args change
if hasattr(checkpoint_callback, k)
},
}
if not self._checkpoint_name:
self._checkpoint_name = f"model-{self.experiment.id}"
artifact = wandb.Artifact(
name=self._checkpoint_name, type="model", metadata=metadata
)
artifact.add_file(p, name="model.ckpt")
aliases = (
["latest", "best"]
if p == checkpoint_callback.best_model_path
else ["latest"]
)
self.experiment.log_artifact(artifact, aliases=aliases)
# remember logged models - timestamp needed in case filename didn't change (lastkckpt or custom name)
self._logged_model_time[p] = t
artifacts.append(artifact)
for artifact in self._last_artifacts:
if not self._offline:
artifact.wait()
artifact.ttl = timedelta(days=self.expiration_days)
artifact.save()
self._last_artifacts = artifacts
class OfflineWandbLogger(SpaceEfficientWandbLogger):
"""
Wraps WandbLogger to trigger offline sync hook occasionally.
This is useful when running on slurm clusters, many of which
only has internet on login nodes, not compute nodes.
"""
def __init__(
self,
name: Optional[str] = None,
save_dir: _PATH = ".",
version: Optional[str] = None,
offline: bool = False,
dir: Optional[_PATH] = None,
id: Optional[str] = None,
anonymous: Optional[bool] = None,
project: Optional[str] = None,
log_model: Union[Literal["all"], bool] = False,
experiment: Union["Run", "RunDisabled", None] = None,
prefix: str = "",
checkpoint_name: Optional[str] = None,
**kwargs: Any,
) -> None:
super().__init__(
name=name,
save_dir=save_dir,
version=version,
offline=False,
dir=dir,
id=id,
anonymous=anonymous,
project=project,
log_model=log_model,
experiment=experiment,
prefix=prefix,
checkpoint_name=checkpoint_name,
**kwargs,
)
self._offline = offline
communication_dir = Path(".wandb_osh_command_dir")
communication_dir.mkdir(parents=True, exist_ok=True)
self.trigger_sync = TriggerWandbSyncHook(communication_dir)
self.last_sync_time = 0.0
self.min_sync_interval = 60
self.wandb_dir = os.path.join(self._save_dir, "wandb/latest-run")
@override
@rank_zero_only
def log_metrics(
self, metrics: Mapping[str, float], step: Optional[int] = None
) -> None:
out = super().log_metrics(metrics, step)
if time.time() - self.last_sync_time > self.min_sync_interval:
self.trigger_sync(self.wandb_dir)
self.last_sync_time = time.time()
return out
def cleanup_project(
entity: str,
project: str,
log_folder: Optional[str] = None,
ignore_ttl: bool = False,
):
"""
cleanup the project by applying TTL policy to the model artifacts
"""
num_deleted = 0
total_size = 0
log_file = Path(log_folder) / f"{datetime.now().strftime('%Y-%m-%d')}.log"
log_file.parent.mkdir(parents=True, exist_ok=True)
with open(log_file, "w") as f:
f.write(f"[Cleanup] {entity}/{project}\n\n")
api = wandb.Api()
runs = api.runs(f"{entity}/{project}", order="-created_at")
tbar = tqdm(runs)
for run in tbar:
versions, size = cleanup_run(run, ignore_ttl)
num_deleted += len(versions)
total_size += size
tbar.set_postfix(
num_deleted=num_deleted,
saved=f"{total_size:.2f} GB",
)
if len(versions) > 0:
with open(log_file, "a") as f:
f.write(f"{run.id}\n{run.name}\n{versions}\n{size:.2f} GB\n\n")
print(cyan(f"Deleted {num_deleted} models, saved {total_size:.2f} GB"))
def cleanup_run(run: Run, ignore_ttl: bool = False) -> Tuple[List[str], float]:
"""
cleanup the models that are not best or latest and have expired
Returns: size of the deleted artifacts (in GB)
"""
size = 0
versions = []
for artifact in run.logged_artifacts():
if (
artifact.type == "model"
and artifact.state == "COMMITTED"
and (
"best" not in artifact.aliases
and "latest" not in artifact.aliases
and "backup" not in artifact.aliases
)
and (artifact.ttl is not None or ignore_ttl)
):
should_delete = True
if not ignore_ttl:
created_at = datetime.strptime(
artifact.created_at, "%Y-%m-%dT%H:%M:%SZ"
)
current_time = datetime.now()
should_delete = current_time - created_at > artifact.ttl
if should_delete:
versions.append(artifact.version)
size += artifact.size / 1024**3
artifact.delete()
return versions, size
if __name__ == "__main__":
import argparse
parser = argparse.ArgumentParser()
parser.add_argument(
"--ignore-ttl",
action="store_true",
help="Ignore TTL policy and delete non-best, non-latest models",
)
args = parser.parse_args()
cleanup_project(
"scene-representation-group",
"video_diffusion",
"wandb_cleanup",
ignore_ttl=args.ignore_ttl,
)
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