File size: 401 Bytes
12fea4a | 1 2 3 4 5 6 7 8 9 10 11 12 13 | #!/usr/bin/env bash
# Unguided / seeded Cas9 rollouts (no objectives) -> one CSV per ortholog.
set -euo pipefail
ROOT="$(cd "$(dirname "$0")/../.." && pwd)"
cd "$ROOT"
python -u -m cas9.generate_cas9_csvs \
--config "$ROOT/configs/config_cas9.yaml" \
--ckpt "$ROOT/cas9/ckpt/last.ckpt" \
--sequences "$ROOT/cas9/data/orthologs.fasta" \
--num_steps 32 \
--output_dir "$ROOT/outputs" \
"$@"
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