Delete post_process.sh
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post_process.sh
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python p-processing.py \
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--input_dir ./nnUNet_predictions \
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--output_dir ./nnUNet_predictions \
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--rules "39:5,40:6|7|8,41:3|4,42:16" \
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--keep_mode any \
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--target_labels "39,40,41,42" \
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--min_size 25 \
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--dilation_iters 1 \
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--connectivity 26 \
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--num_workers 16
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python masks_BDMAP.py \
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--source_dir ./nnUNet_predictions \
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--output_dir ./nnUNet_predictions_BDMAP
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