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results/ralph26_best_permutation_test.tsv
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# Provenance:
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# Script: /media/drn2/External/TARA-Oceans/03_analyses/WorldModelApp/scripts/ralph26_task9_permutation_test_20260212_235500.py
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# Method: 1000-permutation test, shuffle PFAM rows, fast XGBoost
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# Best representation: modules_k40 from Task 3 (ΔR² = +0.0397)
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# Date: 2026-02-12
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# Integrity Check: PASSED - Real data only
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best_representation source_task n_pfam_features observed_delta_r2_full observed_delta_r2_fast mean_r2_env_only_full mean_r2_joint_full t_stat_full t_pval_full wilcoxon_pval_full cohens_d_full null_mean null_std null_p05 null_p50 null_p95 null_min null_max n_permutations n_exceed empirical_p z_score verdict
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modules_k40 Task 3 (k-sweep) 40 0.03969263397477926 0.054449699687963524 0.6304686562137576 0.6701612901885367 0.7574646475479827 0.47049149760626696 0.49609375 0.25248821584932757 0.0031852773935586247 0.10606057203957313 -0.08885570844091226 0.013411287252325717 0.09061487796535968 -2.0651791564081003 0.16837569005192632 1000 198 0.19880119880119881 0.48335042239143505 NOT SIGNIFICANT — PFAM modules at k=40 do NOT survive permutation test
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