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---
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license: agpl-3.0
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---
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license: agpl-3.0
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tags:
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- EpiATLAS
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- IHEC
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- epigenetics
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- EpiClass
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- pytorch
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---
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# Epigenomic Classifer - Biomaterial type
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Epigenome biomaterial classifier trained on the [EpiATLAS dataset](https://ihec-epigenomes.org/epiatlas/data/).
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The classes are:
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- cell line
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- primary cell
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- primary cell culture
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- primary tissue
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The model is a simple fense feedforward neural network, with one hidden layer of 3000 nodes.The model was trained using PyTorch Lightning. See Github repository [rabyj/epi_ml](https://github.com/rabyj/epi_ml/blob/master/src/python/epi_ml/core/model_pytorch.py) for model code.
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See the .o and .e files for training details. More information is also available on Comet ML, in the rabyj/epiclass project. The ID of this training run is [f42b6f4e147c4f1bbe378f3eed415099](https://www.comet.com/rabyj/epiclass/f42b6f4e147c4f1bbe378f3eed415099)
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For more context, like the associated publication, see the EpiClass collection details.
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