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MedNeXt_Large/fold_0_CT/nnUNet/3d_fullres/Task001_Brain2026/nnUNetTrainerV2_MedNeXt_L_kernel3__nnUNetPlansv2.1_trgSp_1x1x1/fold_0/debug.json CHANGED
@@ -1,28 +1,28 @@
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  {
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- "all_tr_losses": "[]",
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- "all_val_eval_metrics": "[]",
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- "all_val_losses": "[]",
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  "also_val_in_tr_mode": "False",
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- "amp_grad_scaler": "None",
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  "base_num_features": "30",
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  "basic_generator_patch_size": "[205 205 205]",
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  "batch_dice": "False",
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  "batch_size": "2",
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- "best_MA_tr_loss_for_patience": "None",
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- "best_epoch_based_on_MA_tr_loss": "None",
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- "best_val_eval_criterion_MA": "None",
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  "conv_per_stage": "2",
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  "data_aug_params": "{'selected_data_channels': None, 'selected_seg_channels': [0], 'do_elastic': False, 'elastic_deform_alpha': (0.0, 900.0), 'elastic_deform_sigma': (9.0, 13.0), 'p_eldef': 0.2, 'do_scaling': True, 'scale_range': (0.7, 1.4), 'independent_scale_factor_for_each_axis': False, 'p_independent_scale_per_axis': 1, 'p_scale': 0.2, 'do_rotation': True, 'rotation_x': (-0.5235987755982988, 0.5235987755982988), 'rotation_y': (-0.5235987755982988, 0.5235987755982988), 'rotation_z': (-0.5235987755982988, 0.5235987755982988), 'rotation_p_per_axis': 1, 'p_rot': 0.2, 'random_crop': False, 'random_crop_dist_to_border': None, 'do_gamma': True, 'gamma_retain_stats': True, 'gamma_range': (0.7, 1.5), 'p_gamma': 0.3, 'do_mirror': True, 'mirror_axes': (0, 1, 2), 'dummy_2D': False, 'mask_was_used_for_normalization': OrderedDict({0: False}), 'border_mode_data': 'constant', 'all_segmentation_labels': None, 'move_last_seg_chanel_to_data': False, 'cascade_do_cascade_augmentations': False, 'cascade_random_binary_transform_p': 0.4, 'cascade_random_binary_transform_p_per_label': 1, 'cascade_random_binary_transform_size': (1, 8), 'cascade_remove_conn_comp_p': 0.2, 'cascade_remove_conn_comp_max_size_percent_threshold': 0.15, 'cascade_remove_conn_comp_fill_with_other_class_p': 0.0, 'do_additive_brightness': False, 'additive_brightness_p_per_sample': 0.15, 'additive_brightness_p_per_channel': 0.5, 'additive_brightness_mu': 0.0, 'additive_brightness_sigma': 0.1, 'num_threads': 8, 'num_cached_per_thread': 2, 'patch_size_for_spatialtransform': array([128, 128, 128])}",
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  "dataset_directory": "/marimo/TopBrain2026/nnUNet_preprocessed/Task001_Brain2026",
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  "deep_supervision_scales": "[[1, 1, 1], [np.float64(0.5), np.float64(0.5), np.float64(0.5)], [np.float64(0.25), np.float64(0.25), np.float64(0.25)], [np.float64(0.125), np.float64(0.125), np.float64(0.125)], [np.float64(0.0625), np.float64(0.0625), np.float64(0.0625)], [np.float64(0.03125), np.float64(0.03125), np.float64(0.03125)]]",
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  "deterministic": "False",
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- "dl_val": "<nnunet_mednext.training.dataloading.dataset_loading.DataLoader3D object at 0x7efe778811d0>",
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  "do_dummy_2D_aug": "False",
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  "ds_loss_weights": "[0.51612903 0.25806452 0.12903226 0.06451613 0.03225806 0. ]",
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- "epoch": "0",
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  "experiment_name": "nnUNetTrainerV2_MedNeXt_L_kernel3",
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  "fold": "0",
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  "folder_with_preprocessed_data": "/marimo/TopBrain2026/nnUNet_preprocessed/Task001_Brain2026/nnUNetData_plans_v2.1_trgSp_1x1x1_stage0",
@@ -32,7 +32,7 @@
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  "inference_pad_kwargs": "{'constant_values': 0}",
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  "init_args": "('/marimo/TopBrain2026/nnUNet_preprocessed/Task001_Brain2026/nnUNetPlansv2.1_trgSp_1x1x1_plans_3D.pkl', 0, '/marimo/TopBrain2026/nnUNet_results/nnUNet/3d_fullres/Task001_Brain2026/nnUNetTrainerV2_MedNeXt_L_kernel3__nnUNetPlansv2.1_trgSp_1x1x1', '/marimo/TopBrain2026/nnUNet_preprocessed/Task001_Brain2026', False, 0, True, False, True)",
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  "initial_lr": "0.001",
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- "log_file": "/marimo/TopBrain2026/nnUNet_results/nnUNet/3d_fullres/Task001_Brain2026/nnUNetTrainerV2_MedNeXt_L_kernel3__nnUNetPlansv2.1_trgSp_1x1x1/fold_0/training_log_2026_11_7_14_01_19.txt",
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  "lr_scheduler": "None",
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@@ -53,7 +53,7 @@
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  "online_eval_tp": "[]",
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  "conv_per_stage": "2",
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  "data_aug_params": "{'selected_data_channels': None, 'selected_seg_channels': [0], 'do_elastic': False, 'elastic_deform_alpha': (0.0, 900.0), 'elastic_deform_sigma': (9.0, 13.0), 'p_eldef': 0.2, 'do_scaling': True, 'scale_range': (0.7, 1.4), 'independent_scale_factor_for_each_axis': False, 'p_independent_scale_per_axis': 1, 'p_scale': 0.2, 'do_rotation': True, 'rotation_x': (-0.5235987755982988, 0.5235987755982988), 'rotation_y': (-0.5235987755982988, 0.5235987755982988), 'rotation_z': (-0.5235987755982988, 0.5235987755982988), 'rotation_p_per_axis': 1, 'p_rot': 0.2, 'random_crop': False, 'random_crop_dist_to_border': None, 'do_gamma': True, 'gamma_retain_stats': True, 'gamma_range': (0.7, 1.5), 'p_gamma': 0.3, 'do_mirror': True, 'mirror_axes': (0, 1, 2), 'dummy_2D': False, 'mask_was_used_for_normalization': OrderedDict({0: False}), 'border_mode_data': 'constant', 'all_segmentation_labels': None, 'move_last_seg_chanel_to_data': False, 'cascade_do_cascade_augmentations': False, 'cascade_random_binary_transform_p': 0.4, 'cascade_random_binary_transform_p_per_label': 1, 'cascade_random_binary_transform_size': (1, 8), 'cascade_remove_conn_comp_p': 0.2, 'cascade_remove_conn_comp_max_size_percent_threshold': 0.15, 'cascade_remove_conn_comp_fill_with_other_class_p': 0.0, 'do_additive_brightness': False, 'additive_brightness_p_per_sample': 0.15, 'additive_brightness_p_per_channel': 0.5, 'additive_brightness_mu': 0.0, 'additive_brightness_sigma': 0.1, 'num_threads': 8, 'num_cached_per_thread': 2, 'patch_size_for_spatialtransform': array([128, 128, 128])}",
18
  "dataset_directory": "/marimo/TopBrain2026/nnUNet_preprocessed/Task001_Brain2026",
19
  "deep_supervision_scales": "[[1, 1, 1], [np.float64(0.5), np.float64(0.5), np.float64(0.5)], [np.float64(0.25), np.float64(0.25), np.float64(0.25)], [np.float64(0.125), np.float64(0.125), np.float64(0.125)], [np.float64(0.0625), np.float64(0.0625), np.float64(0.0625)], [np.float64(0.03125), np.float64(0.03125), np.float64(0.03125)]]",
20
  "deterministic": "False",
21
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22
+ "dl_val": "<nnunet_mednext.training.dataloading.dataset_loading.DataLoader3D object at 0x7efb509411d0>",
23
  "do_dummy_2D_aug": "False",
24
  "ds_loss_weights": "[0.51612903 0.25806452 0.12903226 0.06451613 0.03225806 0. ]",
25
+ "epoch": "150",
26
  "experiment_name": "nnUNetTrainerV2_MedNeXt_L_kernel3",
27
  "fold": "0",
28
  "folder_with_preprocessed_data": "/marimo/TopBrain2026/nnUNet_preprocessed/Task001_Brain2026/nnUNetData_plans_v2.1_trgSp_1x1x1_stage0",
 
32
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33
  "init_args": "('/marimo/TopBrain2026/nnUNet_preprocessed/Task001_Brain2026/nnUNetPlansv2.1_trgSp_1x1x1_plans_3D.pkl', 0, '/marimo/TopBrain2026/nnUNet_results/nnUNet/3d_fullres/Task001_Brain2026/nnUNetTrainerV2_MedNeXt_L_kernel3__nnUNetPlansv2.1_trgSp_1x1x1', '/marimo/TopBrain2026/nnUNet_preprocessed/Task001_Brain2026', False, 0, True, False, True)",
34
  "initial_lr": "0.001",
35
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36
  "lr_scheduler": "None",
37
  "lr_scheduler_eps": "0.001",
38
  "lr_scheduler_patience": "30",
 
53
  "online_eval_fp": "[]",
54
  "online_eval_tp": "[]",
55
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56
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57
  "output_folder": "/marimo/TopBrain2026/nnUNet_results/nnUNet/3d_fullres/Task001_Brain2026/nnUNetTrainerV2_MedNeXt_L_kernel3__nnUNetPlansv2.1_trgSp_1x1x1/fold_0",
58
  "output_folder_base": "/marimo/TopBrain2026/nnUNet_results/nnUNet/3d_fullres/Task001_Brain2026/nnUNetTrainerV2_MedNeXt_L_kernel3__nnUNetPlansv2.1_trgSp_1x1x1",
59
  "oversample_foreground_percent": "0.33",
 
71
  "save_latest_only": "True",
72
  "stage": "0",
73
  "threeD": "True",
74
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75
  "train_loss_MA": "None",
76
  "train_loss_MA_alpha": "0.93",
77
  "train_loss_MA_eps": "0.0005",
 
82
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83
  "val_eval_criterion_MA": "None",
84
  "val_eval_criterion_alpha": "0.9",
85
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86
  "was_initialized": "True",
87
  "weight_decay": "3e-05"
88
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