Add ONNX graphs: ACDC.onnx, ACDC.onnx.config.json, ACDC.onnx.provenance.json, BUSI.onnx, BUSI.onnx.config.json, BUSI.onnx.provenance.json, COVIDQUEx.onnx, COVIDQUEx.onnx.config.json, COVIDQUEx.onnx.provenance.json, DRIVE.onnx, DRIVE.onnx.config.json, DRIVE.onnx.provenance.json, ISIC2018.onnx, ISIC2018.onnx.config.json, ISIC2018.onnx.provenance.json, PROMISE12.onnx, PROMISE12.onnx.config.json, PROMISE12.onnx.provenance.json, UWaterlooSkinCancer.onnx, UWaterlooSkinCancer.onnx.config.json, UWaterlooSkinCancer.onnx.provenance.json (tools/hf_onnx_export.py)
Browse files- ACDC.onnx +3 -0
- ACDC.onnx.config.json +16 -0
- ACDC.onnx.provenance.json +274 -0
- BUSI.onnx +3 -0
- BUSI.onnx.config.json +30 -0
- BUSI.onnx.provenance.json +274 -0
- COVIDQUEx.onnx +3 -0
- COVIDQUEx.onnx.config.json +30 -0
- COVIDQUEx.onnx.provenance.json +274 -0
- DRIVE.onnx +3 -0
- DRIVE.onnx.config.json +30 -0
- DRIVE.onnx.provenance.json +274 -0
- ISIC2018.onnx +3 -0
- ISIC2018.onnx.config.json +30 -0
- ISIC2018.onnx.provenance.json +274 -0
- PROMISE12.onnx +3 -0
- PROMISE12.onnx.config.json +30 -0
- PROMISE12.onnx.provenance.json +274 -0
- UWaterlooSkinCancer.onnx +3 -0
- UWaterlooSkinCancer.onnx.config.json +30 -0
- UWaterlooSkinCancer.onnx.provenance.json +274 -0
ACDC.onnx
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version https://git-lfs.github.com/spec/v1
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oid sha256:37bc7fc6bab57b91295a799c0c64f8b5cc694046754f9b716b87eaf9df1e4b6a
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size 90688086
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ACDC.onnx.config.json
ADDED
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{
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"schema": "medotter/model-sidecar/v1",
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"model": {
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"graph": "onnx",
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| 5 |
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"args": {
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"input_channel": 3,
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"num_classes": 4
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}
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},
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"inference": {
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"size": [
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256,
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256
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| 14 |
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]
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}
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}
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ACDC.onnx.provenance.json
ADDED
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| 1 |
+
{
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| 2 |
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"schema": "medotter/graph-provenance/v1",
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| 3 |
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"source": {
|
| 4 |
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"file": "ACDC.pth",
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| 5 |
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"sha256": "f1296abd14abbecd196b2f5ca3128269733d299c8584738ffcb4a50e558b64df",
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| 6 |
+
"reference": "ACDC.pth",
|
| 7 |
+
"model": "TransAttUnet",
|
| 8 |
+
"declaration_source": "sidecar",
|
| 9 |
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"declaration": [
|
| 10 |
+
{
|
| 11 |
+
"file": "ACDC.pth.config.json",
|
| 12 |
+
"sha256": "7ab5e7329b62318f504015f84cc26b9b549ffca0fcfd420d745d63b7f8f1c9b8"
|
| 13 |
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}
|
| 14 |
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],
|
| 15 |
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"float32_vs_float64": {
|
| 16 |
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"shape": [
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| 17 |
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1,
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| 18 |
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|
| 19 |
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256,
|
| 20 |
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256
|
| 21 |
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],
|
| 22 |
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"torch": "ok",
|
| 23 |
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"float64": "ok",
|
| 24 |
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"threads": 6,
|
| 25 |
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"max_abs_diff": 1.8995942223209994e-05,
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| 26 |
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"scale": 11.14640693494457,
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| 27 |
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"rel_diff": 1.7042211300985897e-06
|
| 28 |
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}
|
| 29 |
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},
|
| 30 |
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"graph": {
|
| 31 |
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"kind": "onnx",
|
| 32 |
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"file": "ACDC.onnx",
|
| 33 |
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"sha256": "37bc7fc6bab57b91295a799c0c64f8b5cc694046754f9b716b87eaf9df1e4b6a",
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"bytes": 90688086,
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| 35 |
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"opset": 17,
|
| 36 |
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"dynamic": true,
|
| 37 |
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"reason": "dynamic_verified",
|
| 38 |
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"input": "image",
|
| 39 |
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"output": "logits",
|
| 40 |
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"input_channel": 3,
|
| 41 |
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"num_classes": 4,
|
| 42 |
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"size": [
|
| 43 |
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256,
|
| 44 |
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256
|
| 45 |
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]
|
| 46 |
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},
|
| 47 |
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"exporter": {
|
| 48 |
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"api": "torch.onnx.export",
|
| 49 |
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"name": "torchscript",
|
| 50 |
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"dynamo": false,
|
| 51 |
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"registered_symbolics": {
|
| 52 |
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"aten::roll": 17
|
| 53 |
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},
|
| 54 |
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"producer": "pytorch 2.13.0",
|
| 55 |
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"torch": "2.13.0+cpu",
|
| 56 |
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"onnx": "1.22.0",
|
| 57 |
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"onnxruntime": "1.29.0"
|
| 58 |
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},
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| 59 |
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"verification_input": {
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| 60 |
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"kind": "smooth_random_field",
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| 61 |
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"distribution": "normal",
|
| 62 |
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"coarse_factor": 16,
|
| 63 |
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"min_coarse": 4,
|
| 64 |
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"interpolation": "bilinear",
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| 65 |
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"align_corners": false,
|
| 66 |
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"seed": 0
|
| 67 |
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},
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| 68 |
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"attempts": [
|
| 69 |
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{
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| 70 |
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"mode": "dynamic",
|
| 71 |
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"exporter": "torchscript",
|
| 72 |
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"outcome": "kept",
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| 73 |
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"reason": null,
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| 74 |
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"error": null,
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| 75 |
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"verification": [
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| 76 |
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{
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| 77 |
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| 78 |
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| 79 |
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],
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"torch": "ok",
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"graph": "ok",
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"max_abs_diff": 1.8358230590820312e-05,
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"scale": 11.146405220031738,
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"rel_diff": 1.6470090785707178e-06
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},
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"torch": "ok",
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"max_abs_diff": 5.14984130859375e-05,
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"rel_diff": 4.677786284418761e-06
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"max_abs_diff": 1.621246337890625e-05,
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"max_abs_diff": 2.09808349609375e-05,
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],
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"verification": [
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"rel_diff": 1.882296089795106e-06
|
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}
|
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],
|
| 211 |
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"exported_at": "2026-09-07T16:29:17+00:00",
|
| 212 |
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"release": {
|
| 213 |
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"repo": "MedOtter/TransAttUnet",
|
| 214 |
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"revision": "c6f9bf70e337165979ad36880a17e96afca6ed20",
|
| 215 |
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"pth_file": "ACDC.pth",
|
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"pth_sha256": "f1296abd14abbecd196b2f5ca3128269733d299c8584738ffcb4a50e558b64df",
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|
| 218 |
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"sidecar_source": "existing",
|
| 219 |
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"group": "checkout_only",
|
| 220 |
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"reference_check": {
|
| 221 |
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"dataset": "ACDC",
|
| 222 |
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"split": "test",
|
| 223 |
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| 225 |
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| 249 |
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|
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| 267 |
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|
| 269 |
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|
| 271 |
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|
| 272 |
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|
| 273 |
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|
| 274 |
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}
|
BUSI.onnx
ADDED
|
@@ -0,0 +1,3 @@
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|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
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oid sha256:25697208cb220e36521b56afcba191b5ba2f4df45784eca48a161539c6917726
|
| 3 |
+
size 90686538
|
BUSI.onnx.config.json
ADDED
|
@@ -0,0 +1,30 @@
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|
| 1 |
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{
|
| 2 |
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"schema": "medotter/model-sidecar/v1",
|
| 3 |
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"model": {
|
| 4 |
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"graph": "onnx",
|
| 5 |
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"args": {
|
| 6 |
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|
| 7 |
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"num_classes": 1
|
| 8 |
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|
| 9 |
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|
| 10 |
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"inference": {
|
| 11 |
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| 12 |
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| 28 |
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|
| 29 |
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|
| 30 |
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|
BUSI.onnx.provenance.json
ADDED
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@@ -0,0 +1,274 @@
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| 1 |
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{
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| 191 |
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| 192 |
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| 211 |
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| 212 |
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|
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|
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| 269 |
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|
| 270 |
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| 271 |
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|
| 272 |
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|
| 273 |
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| 274 |
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|
COVIDQUEx.onnx
ADDED
|
@@ -0,0 +1,3 @@
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|
| 1 |
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version https://git-lfs.github.com/spec/v1
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| 2 |
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oid sha256:b35c75b1ae7cb7f5365214183bd96a90b6e453f31b3a49d8a495ae6737b75a77
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| 3 |
+
size 90686538
|
COVIDQUEx.onnx.config.json
ADDED
|
@@ -0,0 +1,30 @@
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|
| 1 |
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{
|
| 2 |
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"schema": "medotter/model-sidecar/v1",
|
| 3 |
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"model": {
|
| 4 |
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"graph": "onnx",
|
| 5 |
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"args": {
|
| 6 |
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"input_channel": 3,
|
| 7 |
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"num_classes": 1
|
| 8 |
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}
|
| 9 |
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|
| 10 |
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"inference": {
|
| 11 |
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"normalize": {
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| 12 |
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"mean": [
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"scale": 255.0,
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| 24 |
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| 28 |
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"threshold": 0.5
|
| 29 |
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|
| 30 |
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|
COVIDQUEx.onnx.provenance.json
ADDED
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@@ -0,0 +1,274 @@
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|
| 1 |
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{
|
| 2 |
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"schema": "medotter/graph-provenance/v1",
|
| 3 |
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"source": {
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"file": "COVIDQUEx.pth",
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"sha256": "f26f9d8dffdfd3c9c9350d843acc152e65bdbdaea2a074c06f0a3e4d93fd078a",
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"model": "TransAttUnet",
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| 9 |
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"declaration": [
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{
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"graph": {
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"kind": "onnx",
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"file": "COVIDQUEx.onnx",
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"dynamic": true,
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"reason": "dynamic_verified",
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"input": "image",
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DRIVE.onnx
ADDED
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@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:1fb6d08de5ee66a23748e212325910289f8963bf88a9c1f5ab2d75ab1e3b2028
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| 3 |
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size 90686538
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DRIVE.onnx.config.json
ADDED
|
@@ -0,0 +1,30 @@
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|
| 1 |
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{
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"schema": "medotter/model-sidecar/v1",
|
| 3 |
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| 4 |
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"graph": "onnx",
|
| 5 |
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| 6 |
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| 7 |
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| 11 |
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|
DRIVE.onnx.provenance.json
ADDED
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|
| 1 |
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{
|
| 2 |
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|
| 3 |
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|
ISIC2018.onnx
ADDED
|
@@ -0,0 +1,3 @@
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| 1 |
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version https://git-lfs.github.com/spec/v1
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oid sha256:32c4362289a1a6168217cd34600ff6d61d2ee677c9649d0ae9d97e7056a8e269
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| 3 |
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size 90686538
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ISIC2018.onnx.config.json
ADDED
|
@@ -0,0 +1,30 @@
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|
| 1 |
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{
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"schema": "medotter/model-sidecar/v1",
|
| 3 |
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"graph": "onnx",
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| 5 |
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| 6 |
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|
ISIC2018.onnx.provenance.json
ADDED
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@@ -0,0 +1,274 @@
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|
| 1 |
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{
|
| 2 |
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"schema": "medotter/graph-provenance/v1",
|
| 3 |
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"source": {
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| 4 |
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"file": "ISIC2018.pth",
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"sha256": "b8df3ead0f45cc0788156d29f9db5d66c4dcd92ad0841fdb8db2bd2efcb88c33",
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"reference": "ISIC2018.pth",
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| 7 |
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"model": "TransAttUnet",
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"declaration_source": "sidecar",
|
| 9 |
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| 10 |
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{
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"graph": {
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"kind": "onnx",
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| 32 |
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"file": "ISIC2018.onnx",
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"input": "image",
|
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"output": "logits",
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PROMISE12.onnx
ADDED
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@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:085364696f1e37d307be05805db7b5b5f45fb39dde0200760a5ae71045ef5a18
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size 90686538
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PROMISE12.onnx.config.json
ADDED
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@@ -0,0 +1,30 @@
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{
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"schema": "medotter/model-sidecar/v1",
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|
PROMISE12.onnx.provenance.json
ADDED
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|
| 1 |
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{
|
| 2 |
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"schema": "medotter/graph-provenance/v1",
|
| 3 |
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"sha256": "d96cf044209667d67c54c1a8ffafeb736a4909c6625e1a8536d9017bf41819b6",
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|
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"declaration": [
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{
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