tyluan commited on
Commit
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1 Parent(s): a94860c

Add model sidecars: ACDC.pth.config.json, ACDC.pth.provenance.json, BUSI.pth.config.json, BUSI.pth.provenance.json, COVIDQUEx.pth.config.json, COVIDQUEx.pth.provenance.json, DRIVE.pth.config.json, DRIVE.pth.provenance.json, ISIC2018.pth.config.json, ISIC2018.pth.provenance.json, KvasirSEG.pth.config.json, KvasirSEG.pth.provenance.json, PROMISE12.pth.config.json, PROMISE12.pth.provenance.json, UWaterlooSkinCancer.pth.config.json, UWaterlooSkinCancer.pth.provenance.json (tools/hf_sidecars.py)

Browse files
ACDC.pth.config.json ADDED
@@ -0,0 +1,16 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ {
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+ "schema": "medotter/model-sidecar/v1",
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+ "model": {
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+ "name": "TransNorm",
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+ "args": {
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+ "input_channel": 3,
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+ "num_classes": 4
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+ }
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+ },
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+ "inference": {
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+ "size": [
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+ 256,
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+ 256
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+ ]
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+ }
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+ }
ACDC.pth.provenance.json ADDED
@@ -0,0 +1,43 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ {
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+ "schema": "medotter/hf-sidecars-provenance/v1",
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+ "repo": "MedOtter/TransNorm",
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+ "revision": "a94860ca24fdfc770deb39f930e1ed8ab6d91665",
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+ "filename": "ACDC.pth",
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+ "sha256": "84ab4a3f2cb6723715e0d737fc15de4c5d8f2456d3fb17fc9853fcd020b85ca5",
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+ "size": 470920953,
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+ "upstream": {
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+ "repo": "FengheTan9/U-Bench",
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+ "path": "TransNorm/ACDC/checkpoint_best.pth",
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+ "sha256_match": true
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+ },
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+ "training": {
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+ "dataset_name": "ACDC",
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+ "img_size": 256,
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+ "max_epochs": 300,
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+ "max_iterations": 30000,
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+ "do_deeps": 0,
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+ "model_id": 70,
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+ "seed": 41,
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+ "base_lr": 0.01,
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+ "batch_size": 8,
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+ "epoch": 300,
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+ "best_performance": 0.8422737808181275
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+ },
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+ "preprocessing_class": "C",
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+ "intensity_written": false,
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+ "reason": "class C (ACDC): per-volume min-max to [-1, 1], inexpressible as scale/window; no intensity keys are written (the eval door refuses until declared)",
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+ "verification": {
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+ "strict_load": "pass",
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+ "device": "cpu",
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+ "torch": "2.13.0+cpu",
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+ "medotter": "0.1.0",
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+ "parameters": 117676900,
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+ "intensity_overridden_for_probe": [
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+ "input_scale",
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+ "normalize"
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+ ],
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+ "verified_at": "2026-09-06T21:51:58+00:00"
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+ },
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+ "generator": "tools/hf_sidecars.py",
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+ "generated_at": "2026-09-06T21:51:58+00:00"
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+ }
BUSI.pth.config.json ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "schema": "medotter/model-sidecar/v1",
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+ "model": {
4
+ "name": "TransNorm",
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+ "args": {
6
+ "input_channel": 3,
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+ "num_classes": 1
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+ }
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+ },
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+ "inference": {
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+ "size": [
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+ 256,
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+ 256
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+ ],
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+ "scale": 255,
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+ "normalize": {
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+ "mean": [
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+ 0.485,
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+ 0.456,
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+ 0.406
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+ ],
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+ "std": [
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+ 58.395,
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+ 57.12,
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+ 57.375
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+ ]
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+ },
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+ "threshold": 0.5
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+ }
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+ }
BUSI.pth.provenance.json ADDED
@@ -0,0 +1,38 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ {
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+ "schema": "medotter/hf-sidecars-provenance/v1",
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+ "repo": "MedOtter/TransNorm",
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+ "revision": "a94860ca24fdfc770deb39f930e1ed8ab6d91665",
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+ "filename": "BUSI.pth",
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+ "sha256": "c53a8246b7dfb5e738870afb6c22e303060244c8e67870341d22db9ae9318673",
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+ "size": 470918905,
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+ "upstream": {
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+ "repo": "FengheTan9/U-Bench",
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+ "path": "TransNorm/busi/checkpoint_best.pth",
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+ "sha256_match": true
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+ },
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+ "training": {
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+ "dataset_name": "busi",
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+ "img_size": 256,
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+ "max_epochs": 300,
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+ "do_deeps": 0,
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+ "model_id": 70,
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+ "seed": 41,
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+ "base_lr": 0.01,
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+ "batch_size": 8,
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+ "epoch": 110
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+ },
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+ "preprocessing_class": "A",
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+ "intensity_written": true,
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+ "reason": "class A (busi) intensity written",
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+ "verification": {
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+ "strict_load": "pass",
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+ "device": "cpu",
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+ "torch": "2.13.0+cpu",
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+ "medotter": "0.1.0",
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+ "parameters": 117676465,
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+ "intensity_overridden_for_probe": [],
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+ "verified_at": "2026-09-06T21:52:06+00:00"
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+ },
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+ "generator": "tools/hf_sidecars.py",
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+ "generated_at": "2026-09-06T21:52:06+00:00"
38
+ }
COVIDQUEx.pth.config.json ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "schema": "medotter/model-sidecar/v1",
3
+ "model": {
4
+ "name": "TransNorm",
5
+ "args": {
6
+ "input_channel": 3,
7
+ "num_classes": 1
8
+ }
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+ },
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+ "inference": {
11
+ "size": [
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+ 256,
13
+ 256
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+ ],
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+ "scale": 255,
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+ "normalize": {
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+ "mean": [
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+ 0.485,
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+ 0.456,
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+ 0.406
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+ ],
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+ "std": [
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+ 58.395,
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+ 57.12,
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+ 57.375
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+ ]
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+ },
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+ "threshold": 0.5
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+ }
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+ }
COVIDQUEx.pth.provenance.json ADDED
@@ -0,0 +1,38 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "schema": "medotter/hf-sidecars-provenance/v1",
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+ "repo": "MedOtter/TransNorm",
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+ "revision": "a94860ca24fdfc770deb39f930e1ed8ab6d91665",
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+ "filename": "COVIDQUEx.pth",
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+ "sha256": "3ecd1764533239d7c303db04bed91906ded69031c6982d54f37e362cbea40ee1",
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+ "size": 470918107,
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+ "upstream": {
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+ "repo": "FengheTan9/U-Bench",
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+ "path": "TransNorm/covidquex/checkpoint_best.pth",
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+ "sha256_match": true
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+ },
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+ "training": {
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+ "dataset_name": "covidquex",
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+ "img_size": 256,
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+ "max_epochs": 300,
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+ "do_deeps": 0,
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+ "model_id": 70,
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+ "seed": 41,
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+ "base_lr": 0.01,
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+ "batch_size": 8,
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+ "epoch": 166
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+ },
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+ "preprocessing_class": "A",
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+ "intensity_written": true,
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+ "reason": "class A (covidquex) intensity written",
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+ "verification": {
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+ "strict_load": "pass",
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+ "device": "cpu",
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+ "torch": "2.13.0+cpu",
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+ "medotter": "0.1.0",
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+ "parameters": 117676465,
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+ "intensity_overridden_for_probe": [],
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+ "verified_at": "2026-09-06T21:52:15+00:00"
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+ },
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+ "generator": "tools/hf_sidecars.py",
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+ "generated_at": "2026-09-06T21:52:15+00:00"
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+ }
DRIVE.pth.config.json ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ {
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+ "schema": "medotter/model-sidecar/v1",
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+ "model": {
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+ "name": "TransNorm",
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+ "args": {
6
+ "input_channel": 3,
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+ "num_classes": 1
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+ }
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+ },
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+ "inference": {
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+ "size": [
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+ 256,
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+ 256
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+ ],
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+ "scale": 255,
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+ "normalize": {
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+ "mean": [
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+ 0.485,
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+ 0.456,
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+ 0.406
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+ ],
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+ "std": [
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+ 58.395,
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+ 57.12,
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+ 57.375
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+ ]
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+ },
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+ "threshold": 0.5
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+ }
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+ }
DRIVE.pth.provenance.json ADDED
@@ -0,0 +1,38 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "schema": "medotter/hf-sidecars-provenance/v1",
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+ "repo": "MedOtter/TransNorm",
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+ "revision": "a94860ca24fdfc770deb39f930e1ed8ab6d91665",
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+ "filename": "DRIVE.pth",
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+ "sha256": "21b5d3484214e73114f522eac07c4ba6444ae87f64492e35be88556e6e00301e",
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+ "size": 470918905,
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+ "upstream": {
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+ "repo": "FengheTan9/U-Bench",
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+ "path": "TransNorm/DRIVE/checkpoint_best.pth",
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+ "sha256_match": true
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+ },
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+ "training": {
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+ "dataset_name": "DRIVE",
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+ "img_size": 256,
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+ "max_epochs": 300,
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+ "do_deeps": 0,
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+ "model_id": 70,
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+ "seed": 41,
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+ "base_lr": 0.01,
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+ "batch_size": 8,
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+ "epoch": 174
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+ },
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+ "preprocessing_class": "A",
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+ "intensity_written": true,
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+ "reason": "class A (DRIVE) intensity written",
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+ "verification": {
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+ "strict_load": "pass",
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+ "device": "cpu",
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+ "torch": "2.13.0+cpu",
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+ "medotter": "0.1.0",
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+ "parameters": 117676465,
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+ "intensity_overridden_for_probe": [],
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+ "verified_at": "2026-09-06T21:52:24+00:00"
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+ },
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+ "generator": "tools/hf_sidecars.py",
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+ "generated_at": "2026-09-06T21:52:24+00:00"
38
+ }
ISIC2018.pth.config.json ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "schema": "medotter/model-sidecar/v1",
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+ "model": {
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+ "name": "TransNorm",
5
+ "args": {
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+ "input_channel": 3,
7
+ "num_classes": 1
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+ }
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+ },
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+ "inference": {
11
+ "size": [
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+ 256,
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+ 256
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+ ],
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+ "scale": 255,
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+ "normalize": {
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+ "mean": [
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+ 0.485,
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+ 0.456,
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+ 0.406
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+ ],
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+ "std": [
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+ 58.395,
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+ 57.12,
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+ 57.375
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+ ]
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+ },
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+ "threshold": 0.5
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+ }
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+ }
ISIC2018.pth.provenance.json ADDED
@@ -0,0 +1,38 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "schema": "medotter/hf-sidecars-provenance/v1",
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+ "repo": "MedOtter/TransNorm",
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+ "revision": "a94860ca24fdfc770deb39f930e1ed8ab6d91665",
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+ "filename": "ISIC2018.pth",
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+ "sha256": "86e7324a0bce0e2290f79c19a5ad0cf4884451d44407291920a5e9c7db1a872d",
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+ "size": 470918969,
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+ "upstream": {
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+ "repo": "FengheTan9/U-Bench",
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+ "path": "TransNorm/isic18/checkpoint_best.pth",
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+ "sha256_match": true
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+ },
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+ "training": {
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+ "dataset_name": "isic18",
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+ "img_size": 256,
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+ "max_epochs": 300,
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+ "do_deeps": 0,
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+ "model_id": 70,
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+ "seed": 41,
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+ "base_lr": 0.01,
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+ "batch_size": 8,
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+ "epoch": 184
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+ },
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+ "preprocessing_class": "A",
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+ "intensity_written": true,
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+ "reason": "class A (isic18) intensity written",
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+ "verification": {
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+ "strict_load": "pass",
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+ "device": "cpu",
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+ "torch": "2.13.0+cpu",
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+ "medotter": "0.1.0",
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+ "parameters": 117676465,
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+ "intensity_overridden_for_probe": [],
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+ "verified_at": "2026-09-06T21:52:31+00:00"
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+ },
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+ "generator": "tools/hf_sidecars.py",
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+ "generated_at": "2026-09-06T21:52:31+00:00"
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+ }
KvasirSEG.pth.config.json ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "schema": "medotter/model-sidecar/v1",
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+ "model": {
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+ "name": "TransNorm",
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+ "args": {
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+ "input_channel": 3,
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+ "num_classes": 1
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+ }
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+ },
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+ "inference": {
11
+ "size": [
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+ 256,
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+ 256
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+ ],
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+ "scale": 255,
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+ "normalize": {
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+ "mean": [
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+ 0.485,
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+ 0.456,
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+ 0.406
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+ ],
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+ "std": [
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+ 0.229,
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+ 0.224,
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+ 0.225
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+ ]
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+ },
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+ "threshold": 0.5
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+ }
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+ }
KvasirSEG.pth.provenance.json ADDED
@@ -0,0 +1,38 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "schema": "medotter/hf-sidecars-provenance/v1",
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+ "repo": "MedOtter/TransNorm",
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+ "revision": "a94860ca24fdfc770deb39f930e1ed8ab6d91665",
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+ "filename": "KvasirSEG.pth",
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+ "sha256": "be753739fca3c4caad57bf628a637f27c487029d13eff45bb1ad4860c9842d2e",
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+ "size": 470918969,
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+ "upstream": {
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+ "repo": "FengheTan9/U-Bench",
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+ "path": "TransNorm/Kvasir-SEG/checkpoint_best.pth",
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+ "sha256_match": true
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+ },
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+ "training": {
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+ "dataset_name": "Kvasir-SEG",
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+ "img_size": 256,
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+ "max_epochs": 300,
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+ "do_deeps": 0,
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+ "model_id": 70,
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+ "seed": 41,
20
+ "base_lr": 0.01,
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+ "batch_size": 8,
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+ "epoch": 228
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+ },
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+ "preprocessing_class": "B",
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+ "intensity_written": true,
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+ "reason": "class B (Kvasir-SEG) intensity written",
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+ "verification": {
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+ "strict_load": "pass",
29
+ "device": "cpu",
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+ "torch": "2.13.0+cpu",
31
+ "medotter": "0.1.0",
32
+ "parameters": 117676465,
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+ "intensity_overridden_for_probe": [],
34
+ "verified_at": "2026-09-06T21:52:38+00:00"
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+ },
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+ "generator": "tools/hf_sidecars.py",
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+ "generated_at": "2026-09-06T21:52:38+00:00"
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+ }
PROMISE12.pth.config.json ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "schema": "medotter/model-sidecar/v1",
3
+ "model": {
4
+ "name": "TransNorm",
5
+ "args": {
6
+ "input_channel": 3,
7
+ "num_classes": 1
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+ }
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+ },
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+ "inference": {
11
+ "size": [
12
+ 256,
13
+ 256
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+ ],
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+ "scale": 255,
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+ "normalize": {
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+ "mean": [
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+ 0.485,
19
+ 0.456,
20
+ 0.406
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+ ],
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+ "std": [
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+ 58.395,
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+ 57.12,
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+ 57.375
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+ ]
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+ },
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+ "threshold": 0.5
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+ }
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+ }
PROMISE12.pth.provenance.json ADDED
@@ -0,0 +1,38 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "schema": "medotter/hf-sidecars-provenance/v1",
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+ "repo": "MedOtter/TransNorm",
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+ "revision": "a94860ca24fdfc770deb39f930e1ed8ab6d91665",
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+ "filename": "PROMISE12.pth",
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+ "sha256": "8ac6c4d34a32d2e2b841e9b5bba9b00b8857e7495d19595cefe9926abccd8f64",
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+ "size": 470918492,
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+ "upstream": {
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+ "repo": "FengheTan9/U-Bench",
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+ "path": "TransNorm/promise12/checkpoint_best.pth",
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+ "sha256_match": true
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+ },
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+ "training": {
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+ "dataset_name": "promise12",
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+ "img_size": 256,
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+ "max_epochs": 300,
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+ "do_deeps": 0,
18
+ "model_id": 70,
19
+ "seed": 41,
20
+ "base_lr": 0.01,
21
+ "batch_size": 8,
22
+ "epoch": 185
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+ },
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+ "preprocessing_class": "A",
25
+ "intensity_written": true,
26
+ "reason": "class A (promise12) intensity written",
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+ "verification": {
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+ "strict_load": "pass",
29
+ "device": "cpu",
30
+ "torch": "2.13.0+cpu",
31
+ "medotter": "0.1.0",
32
+ "parameters": 117676465,
33
+ "intensity_overridden_for_probe": [],
34
+ "verified_at": "2026-09-06T21:52:45+00:00"
35
+ },
36
+ "generator": "tools/hf_sidecars.py",
37
+ "generated_at": "2026-09-06T21:52:45+00:00"
38
+ }
UWaterlooSkinCancer.pth.config.json ADDED
@@ -0,0 +1,30 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "schema": "medotter/model-sidecar/v1",
3
+ "model": {
4
+ "name": "TransNorm",
5
+ "args": {
6
+ "input_channel": 3,
7
+ "num_classes": 1
8
+ }
9
+ },
10
+ "inference": {
11
+ "size": [
12
+ 256,
13
+ 256
14
+ ],
15
+ "scale": 255,
16
+ "normalize": {
17
+ "mean": [
18
+ 0.485,
19
+ 0.456,
20
+ 0.406
21
+ ],
22
+ "std": [
23
+ 58.395,
24
+ 57.12,
25
+ 57.375
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+ ]
27
+ },
28
+ "threshold": 0.5
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+ }
30
+ }
UWaterlooSkinCancer.pth.provenance.json ADDED
@@ -0,0 +1,38 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "schema": "medotter/hf-sidecars-provenance/v1",
3
+ "repo": "MedOtter/TransNorm",
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+ "revision": "a94860ca24fdfc770deb39f930e1ed8ab6d91665",
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+ "filename": "UWaterlooSkinCancer.pth",
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+ "sha256": "cf57d25eb11dc60313ea265ac01d3b7276953ab06bf124d066dd6b96de20aaf5",
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+ "size": 470918556,
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+ "upstream": {
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+ "repo": "FengheTan9/U-Bench",
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+ "path": "TransNorm/uwaterlooskincancer/checkpoint_best.pth",
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+ "sha256_match": true
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