| # Dependencies already provided by the OneScience bio-dcu environment are kept | |
| # below as comments for traceability. Only uncommented packages need installing. | |
| antiberty>=0.1.1 | |
| # biopython>=1.81 # provided by OneScience (1.84) | |
| # einops>=0.3.0 # provided by OneScience (>=0.7.0) | |
| future>=0.18.2 | |
| # matplotlib>=3.7 # provided by OneScience | |
| # numpy==1.21.2 # provided by OneScience (1.26.3) | |
| # pytorch-lightning>=1.5.10,<1.9.0 # OneScience provides 2.0.6; keep its version | |
| # requests>=2.26.0 # provided by OneScience | |
| # seaborn>=0.12 # provided by OneScience | |
| # torch==1.7.1 # provided by the OneScience bio-dcu base environment | |
| # tqdm>=4.62.1 # provided by OneScience (>=4.60.0) | |
| yapf>=0.31.0 | |
| # py3Dmol>=1.8.0 # provided by OneScience (2.5.2) | |