| target: | |
| # Path to the target structure (PDB or CIF) | |
| file: "./conf/examples/5o45.cif" | |
| # Specify the target chain(s) | |
| chains: | |
| # Configuration for Target Chain A | |
| A: | |
| # Crop regions (Optional) | |
| crop: ["1-116"] | |
| # Binding hotspot residues (Optional) | |
| hotspots: [40, 99, 107] | |
| # Path to pre-computed MSA (Optional but recommended) | |
| msa: "./conf/examples/msa/PDL1/0" | |
| # Number of amino acids of the binder to be designed | |
| binder_length: 80 | |