File size: 9,889 Bytes
0d5371b | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 | """
Stormer Inference Script β Matching Official Implementation.
Performs autoregressive weather forecasting following the official
forward_validation logic exactly:
For each step:
norm_diff = model(x_norm, interval) # predict in diff-normalized space
raw_diff = reverse_diff_transform(norm_diff) # β original space
pred_raw = reverse_inp_transform(x_norm) + raw_diff # β original value
x_norm = inp_transform(pred_raw) # re-normalize for next step
Each target lead time uses all compatible base intervals [6, 12, 24],
then ensemble-averages the predictions.
Usage:
python scripts/inference.py
"""
import torch
import os
import sys
import warnings
from pathlib import Path
# Suppress warnings from external libraries
warnings.filterwarnings("ignore", category=UserWarning, module="apex")
warnings.filterwarnings("ignore", message=".*DtypeTensor constructors.*")
root_path = Path(__file__).parent.parent
sys.path.append(str(root_path))
import glob
import numpy as np
import h5py
from tqdm import tqdm
from model.stormer import Stormer, CONSTANTS
from onescience.utils.YParams import YParams
from onescience.datapipes.climate import ERA5Datapipe
# ============================================================================
# Normalization utilities (same as train.py)
# ============================================================================
class Normalize:
"""Per-variable normalization: y = (x - mean) / std."""
def __init__(self, mean, std, device='cpu'):
self.mean = mean.view(1, -1, 1, 1).to(device)
self.std = std.view(1, -1, 1, 1).to(device)
def __call__(self, x):
if x.dim() == 3:
x = x.unsqueeze(0)
return ((x - self.mean) / self.std).squeeze(0)
return (x - self.mean) / self.std
def get_reverse_transform(transform):
"""Return the inverse of a Normalize transform."""
mean = transform.mean.view(-1)
std = transform.std.view(-1)
std_rev = 1.0 / std
mean_rev = -mean * std_rev
return Normalize(mean_rev, std_rev, device=transform.mean.device)
def load_normalization_stats(normalize_dir, variables, device):
"""Load official Stormer normalization constants."""
# Input normalization
mean_dict = dict(np.load(os.path.join(normalize_dir, "normalize_mean.npz")))
std_dict = dict(np.load(os.path.join(normalize_dir, "normalize_std.npz")))
inp_mean = np.concatenate([mean_dict[v] for v in variables], axis=0)
inp_std = np.concatenate([std_dict[v] for v in variables], axis=0)
inp_mean_t = torch.from_numpy(inp_mean).float()
inp_std_t = torch.from_numpy(inp_std).float()
inp_transform = Normalize(inp_mean_t, inp_std_t, device)
reverse_inp_transform = get_reverse_transform(inp_transform)
# Diff normalization for each interval
reverse_diff_transform = {}
for interval in [6, 12, 24]:
dmean_dict = dict(np.load(
os.path.join(normalize_dir, f"normalize_diff_mean_{interval}.npz")))
dstd_dict = dict(np.load(
os.path.join(normalize_dir, f"normalize_diff_std_{interval}.npz")))
dmean = np.concatenate([dmean_dict[v] for v in variables], axis=0)
dstd = np.concatenate([dstd_dict[v] for v in variables], axis=0)
dmean_t = torch.from_numpy(dmean).float()
dstd_t = torch.from_numpy(dstd).float()
diff_transform = Normalize(dmean_t, dstd_t, device)
reverse_diff_transform[interval] = get_reverse_transform(diff_transform)
return inp_transform, reverse_inp_transform, reverse_diff_transform
def _replace_constant(yhat, out_variables):
"""Zero out diffs for constant/invariant variables."""
for i in range(yhat.shape[1]):
if out_variables[i] in CONSTANTS:
yhat[:, i] = 0.0
return yhat
def get_stats(data_dir, channels):
"""Read normalization statistics from HDF5 (for denormalizing output)."""
h5_files = sorted(glob.glob(os.path.join(data_dir, "data", "*.h5")))
with h5py.File(h5_files[0], "r") as f:
ds = f["fields"]
all_variables = [
v.decode() if isinstance(v, bytes) else v for v in ds.attrs["variables"]
]
mu = f["global_means"][:]
std = f["global_stds"][:]
channel_indices = [all_variables.index(v) for v in channels]
means = mu[:, channel_indices, :, :]
stds = std[:, channel_indices, :, :]
return means, stds
# ============================================================================
# Inference
# ============================================================================
def autoregressive_rollout(model, x, variables, interval, steps, device,
inp_transform, reverse_inp_transform,
reverse_diff_transform):
"""Autoregressive rollout matching official forward_validation.
Args:
model: Stormer model
x: (1, V, H, W) initial state in INPUT-NORMALIZED space
variables: list of variable names
interval: base interval in hours
steps: number of autoregressive steps
device: torch device
Returns:
x: (1, V, H, W) final predicted state in INPUT-NORMALIZED space
"""
interval_tensor = torch.tensor([interval], device=device, dtype=torch.float32)
for _ in range(steps):
# Predict diff in diff-normalized space
norm_diff = model(x, variables, interval_tensor)
norm_diff = _replace_constant(norm_diff, variables)
# Convert diff from diff-normalized β original space
raw_diff = reverse_diff_transform[interval](norm_diff)
# Convert input from input-normalized β original space
pred_raw = reverse_inp_transform(x) + raw_diff
# Re-normalize for next step
x = inp_transform(pred_raw)
return x
if __name__ == "__main__":
current_path = os.getcwd()
sys.path.append(current_path)
# Config
config_file_path = os.path.join(current_path, "conf/config.yaml")
cfg = YParams(config_file_path, "model")
cfg_data = YParams(config_file_path, "datapipe")
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
print(f"Using device: {device}")
variables = cfg_data.dataset.channels
# Load normalization stats
normalize_dir = cfg.normalize_dir
(inp_transform, reverse_inp_transform,
reverse_diff_transform) = load_normalization_stats(
normalize_dir, variables, device)
print(f"β
Normalization stats loaded from {normalize_dir}")
# Load HDF5 stats for final output denormalization
means, stds = get_stats(cfg_data.dataset.data_dir, variables)
# DataLoader for test set (raw single steps)
datapipe = ERA5Datapipe(
dataset_dir=cfg_data.dataset.data_dir,
used_variables=variables,
used_years=cfg_data.dataset.test_time,
distributed=False,
batch_size=1,
num_workers=4,
input_steps=1,
output_steps=1,
normalize=False, # Raw data β we apply official normalization
)
test_dataloader, _ = datapipe.get_dataloader("test")
# Load model
ckpt_path = f"{cfg.checkpoint_dir}/model_bak.pth"
if not os.path.exists(ckpt_path):
raise FileNotFoundError(
f"β Checkpoint not found at {ckpt_path}. "
"Please train the model first."
)
ckpt = torch.load(ckpt_path, map_location=device, weights_only=False)
model = Stormer(
in_img_size=cfg.in_img_size,
variables=variables,
patch_size=cfg.patch_size,
hidden_size=cfg.hidden_size,
depth=cfg.depth,
num_heads=cfg.num_heads,
mlp_ratio=cfg.mlp_ratio,
).to(device)
model.load_state_dict(ckpt["model_state_dict"])
model.eval()
print(f"β
Model loaded from {ckpt_path}")
list_intervals = cfg.list_train_intervals
val_lead_times = cfg.val_lead_times
os.makedirs('result/output/', exist_ok=True)
print(f"\nπ Predictions will be saved to './result/output/'")
with torch.no_grad():
for data in tqdm(test_dataloader, desc="Inferring test set", unit="batch"):
invar = data[0].to(device, dtype=torch.float32).squeeze(0) # (C, H, W) raw
filename = data[4][-1][0] # time_index
# Normalize input with official stats
x_norm = inp_transform(invar).unsqueeze(0) # (1, V, H, W)
for lead_time in val_lead_times:
all_preds = []
for interval in list_intervals:
if lead_time % interval == 0:
steps = lead_time // interval
pred_norm = autoregressive_rollout(
model, x_norm, variables, interval, steps, device,
inp_transform, reverse_inp_transform,
reverse_diff_transform,
)
all_preds.append(pred_norm)
if all_preds:
ensemble_pred_norm = torch.stack(all_preds, dim=0).mean(0)
else:
interval = list_intervals[0]
steps = lead_time // interval
ensemble_pred_norm = autoregressive_rollout(
model, x_norm, variables, interval, steps, device,
inp_transform, reverse_inp_transform,
reverse_diff_transform,
)
# Denormalize: pred_raw = reverse_inp(pred_norm)
pred_raw = reverse_inp_transform(ensemble_pred_norm).cpu().numpy()
# Save
save_name = f"{filename}_lead{lead_time}h"
np.save(f"result/output/{save_name}.npy", pred_raw)
print(f"β
Inference complete. Results saved to './result/output/'")
|