Download scripts/examples/example_proteinmpnn_runlist.sh from OneScience-Group/dl_binder_design: direct link, hf CLI and curl.
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https://huggingface.co/OneScience-Group/dl_binder_design/resolve/main/scripts/examples/example_proteinmpnn_runlist.sh
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386 Bytes
| set -euo pipefail | |
| ROOT="$(cd "$(dirname "${BASH_SOURCE[0]}")/../.." && pwd)" | |
| cd "$ROOT" | |
| python model/mpnn_fr/dl_interface_design.py \ | |
| -pdbdir conf/examples/inputs/pdbs \ | |
| -runlist conf/examples/inputs/tags.list \ | |
| -relax_cycles 1 \ | |
| -seqs_per_struct 1 \ | |
| -outpdbdir output/example_proteinmpnn_runlist \ | |
| -checkpoint_name output/example_proteinmpnn_runlist.checkpoint | |