Instructions to use Tonic/GaiaMiniMed with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- PEFT
How to use Tonic/GaiaMiniMed with PEFT:
from peft import PeftModel from transformers import AutoModelForCausalLM base_model = AutoModelForCausalLM.from_pretrained("tiiuae/falcon-7b-instruct") model = PeftModel.from_pretrained(base_model, "Tonic/GaiaMiniMed") - Notebooks
- Google Colab
- Kaggle
Update README.md
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README.md
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@@ -66,120 +66,78 @@ See the [author's demo](https://huggingface.co/spaces/tonic/gaiaminimed)
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Use the code below to get started with the model.
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```python
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from peft import PeftModel, PeftConfig
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import torch
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import gradio as gr
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device = "cuda" if torch.cuda.is_available() else "cpu"
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base_model_id = "tiiuae/falcon-7b-instruct"
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model_directory = "Tonic/GaiaMiniMed"
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# Instantiate the Tokenizer
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tokenizer = AutoTokenizer.from_pretrained(base_model_id, trust_remote_code=True, padding_side="left")
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#peft_config = PeftConfig(
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# max_length=500,
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# use_cache=True,
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# early_stopping=False,
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# bos_token_id=tokenizer.bos_token_id, # Use the tokenizer's BOS token ID
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# eos_token_id=tokenizer.eos_token_id, # Use the tokenizer's EOS token ID
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# pad_token_id=tokenizer.eos_token_id, # Use the tokenizer's EOS token ID
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# temperature=0.4,
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# do_sample=True
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#)
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# Load the GaiaMiniMed model with the specified configuration
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# Load the Peft model with a specific configuration
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# Specify the configuration class for the model
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model_config = PeftConfig.from_pretrained(model_directory) #use base falcon config
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# Load the PEFT model with the specified configuration
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peft_model = AutoModelForCausalLM.from_pretrained(base_model_id, config=model_config)
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peft_model = PeftModel.from_pretrained(model="Tonic/GaiaMiniMed")
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peft_model = PeftModel.from_pretrained(peft_model, "Tonic/GaiaMiniMed")
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# Class to encapsulate the Falcon chatbot
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class FalconChatBot:
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def __init__(self, system_prompt="You are an expert medical analyst:"):
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self.system_prompt = system_prompt
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def
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user_message = message["user"]
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assistant_message = message["assistant"]
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# Check if the user_message is not a special command
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if not user_message.startswith("Falcon:"):
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filtered_history.append({"user": user_message, "assistant": assistant_message})
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return filtered_history
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def predict(self, input_data, max_length=500):
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# Extract messages from the input data
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preprompt = input_data["preprompt"]
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history = input_data["history"]
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# Process the history to remove special commands
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processed_history = self.process_history(history)
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# Generate the formatted conversation in Falcon message format
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conversation = f"{preprompt}\n"
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for message in processed_history:
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user_message = message["user"]
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assistant_message = message["assistant"]
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conversation += f"Falcon:{' ' + assistant_message if assistant_message else ''} User: {user_message}\n Falcon:\n"
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# Encode the formatted conversation using the tokenizer
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input_ids = tokenizer.encode(conversation, return_tensors="pt", add_special_tokens=False)
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# Generate a response using the Falcon model
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response = falcon_model.generate(input_ids, max_length=max_length, use_cache=True, early_stopping=True, bos_token_id=falcon_model.config.bos_token_id, eos_token_id=falcon_model.config.eos_token_id, pad_token_id=falcon_model.config.eos_token_id, temperature=0.4, do_sample=True)
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# Decode the generated response to text
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response_text = tokenizer.decode(response[0], skip_special_tokens=True)
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return response_text
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description = "You can use this Space to test out the GaiaMiniMed model [(Tonic/GaiaMiniMed)](https://huggingface.co/Tonic/GaiaMiniMed) or duplicate this Space and use it locally or on 馃HuggingFace. [Join me on Discord to build together](https://discord.gg/VqTxc76K3u)."
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examples = [{
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"preprompt": "system message",
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"history": [{
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"user": "user message 1",
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"assistant": "assistant message 1"
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}, {
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"user": "user message 1",
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"assistant": None
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}]
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}]
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iface = gr.Interface(
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fn=
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title=title,
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description=description,
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examples=examples,
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inputs=[
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gr.inputs.Textbox(label="Input Data", type="json"),
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],
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outputs="text",
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theme="ParityError/Anime"
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)
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# Launch the Gradio interface for the Falcon model
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iface.launch()
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```
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Use the code below to get started with the model.
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```python
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from transformers import AutoConfig, AutoTokenizer, AutoModelForSeq2SeqLM, AutoModelForCausalLM, MistralForCausalLM
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from peft import PeftModel, PeftConfig
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import torch
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import gradio as gr
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import random
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from textwrap import wrap
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def wrap_text(text, width=90):
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lines = text.split('\n')
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wrapped_lines = [textwrap.fill(line, width=width) for line in lines]
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wrapped_text = '\n'.join(wrapped_lines)
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return wrapped_text
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def multimodal_prompt(user_input, system_prompt="You are an expert medical analyst:"):
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formatted_input = f"{{{{ {system_prompt} }}}}\nUser: {user_input}\nFalcon:"
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encodeds = tokenizer(formatted_input, return_tensors="pt", add_special_tokens=False)
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model_inputs = encodeds.to(device)
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output = model.generate(
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**model_inputs,
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max_length=500,
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use_cache=True,
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early_stopping=False,
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bos_token_id=peft_model.config.bos_token_id,
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eos_token_id=peft_model.config.eos_token_id,
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pad_token_id=peft_model.config.eos_token_id,
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temperature=0.4,
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do_sample=True
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)
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response_text = tokenizer.decode(output[0], skip_special_tokens=True)
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return response_text
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device = "cuda" if torch.cuda.is_available() else "cpu"
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base_model_id = "tiiuae/falcon-7b-instruct"
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model_directory = "Tonic/GaiaMiniMed"
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tokenizer = AutoTokenizer.from_pretrained(base_model_id, trust_remote_code=True, padding_side="left")
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model_config = AutoConfig.from_pretrained(base_model_id)
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peft_model = AutoModelForCausalLM.from_pretrained(model_directory, config=model_config)
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peft_model = PeftModel.from_pretrained(peft_model, model_directory)
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class ChatBot:
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def __init__(self, system_prompt="You are an expert medical analyst:"):
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self.system_prompt = system_prompt
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self.history = []
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def predict(self, user_input, system_prompt):
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formatted_input = f"{{{{ {self.system_prompt} }}}}\nUser: {user_input}\nFalcon:"
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input_ids = tokenizer.encode(formatted_input, return_tensors="pt", add_special_tokens=False)
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response = peft_model.generate(input_ids, max_length=900, use_cache=False, early_stopping=False, bos_token_id=peft_model.config.bos_token_id, eos_token_id=peft_model.config.eos_token_id, pad_token_id=peft_model.config.eos_token_id, temperature=0.4, do_sample=True)
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response_text = tokenizer.decode(response[0], skip_special_tokens=True)
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self.history.append(formatted_input)
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self.history.append(response_text)
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return response_text
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bot = ChatBot()
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title = "馃憢馃徎Welcome to Tonic's GaiaMiniMed Chat馃殌"
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description = "You can use this Space to test out the current model [(Tonic/GaiaMiniMed)](https://huggingface.co/Tonic/GaiaMiniMed) or duplicate this Space and use it locally or on 馃HuggingFace. [Join me on Discord to build together](https://discord.gg/VqTxc76K3u)."
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examples = [["What is the proper treatment for buccal herpes?", "You are a medicine and public health expert, you will receive a question, answer the question, and provide a complete answer"]]
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iface = gr.Interface(
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fn=bot.predict,
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title=title,
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description=description,
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examples=examples,
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inputs=["text", "text"],
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outputs="text",
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theme="ParityError/Anime"
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)
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iface.launch()
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```
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