File size: 11,311 Bytes
cd6775d | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 | import os
os.environ['HF_ENDPOINT'] = 'https://hf-mirror.com'
os.environ['HTTP_PROXY'] = 'http://127.0.0.1:7890'
os.environ['HTTPS_PROXY'] = 'http://127.0.0.1:7890'
from transformers import pipeline
import torch
import pandas as pd
import sys
import os
sys.path.append(os.path.join(os.path.dirname(os.path.abspath(__file__)), '..', '..', 'document_retrieval', 'Decompose_retrieval'))
import ragqa_paths # [ragqa] portable paths
from vllm import LLM, SamplingParams
from transformers import AutoTokenizer
from openai import OpenAI
os.environ["CUDA_VISIBLE_DEVICES"] = "0"
from multiqa import *
import requests
import pickle
from tqdm import tqdm
# from byaldi import RAGMultiModalModel
dataset = 'multiqa'
# colpali = RAGMultiModalModel.from_index(dataset, index_root = "/data1/liuyaoyang/Papers/icml2025/multi_rag/byaldi/indexes")
import re
def filter_subqueries(data, queries):
filtered_data = []
for group, query in zip(data, queries):
filtered_group = []
query_tokens = set(re.findall(r"\w+", query.lower())) # 提取queries中的单词
for subquery in group[0]:
subquery_tokens = re.findall(r"\w+", subquery) # 提取subquery中的单词
filtered_subquery = " ".join([token for token in subquery_tokens if token.lower() in query_tokens])
filtered_group.append(filtered_subquery)
filtered_data.append([filtered_group])
return filtered_data
def call_llama3_single_prompt(
inputs, model="Llama-3.1-8B-Instruct", max_decode_steps=20, temperature=0.0
):
inputs_ls = []
if isinstance(inputs, str):
messages = [
{"role": "user", "content": inputs},
]
inputs_ls.append(tokenizer.apply_chat_template(messages, tokenize=False, add_generation_prompt=True))
else:
for idx in range(len(inputs)):
inputs_ls.append(tokenizer.apply_chat_template(inputs[idx], tokenize=False, add_generation_prompt=True))
# ans = get_vllm_llama(temperature, max_decode_steps, inputs_ls)
results = client.completions.create(
model=ragqa_paths.LLAMA_MODEL,
max_tokens=max_decode_steps,
temperature=0,
prompt=inputs_ls,
timeout = None
)
ans = []
for item in results.choices:
ans.append([item.text.strip()])
return ans
def call_llama3_func(
inputs, model="Llama-3.1-8B-Instruct", max_decode_steps=100, temperature=0.0
):
print(max_decode_steps, temperature)
output = call_llama3_single_prompt(
inputs,
model=model,
max_decode_steps=max_decode_steps,
temperature=temperature
)
if isinstance(inputs, str):
return output[0]
else:
return output
def get_supervised_decom(queries_ls):
prompts = []
for query in queries_ls:
prompts.append([{"role": "user", "content": query}])
prompts_tokened = [tokenizer.apply_chat_template(x, tokenize=False, add_generation_prompt=True) for x in prompts]
results = client.completions.create(
model="supervised",
max_tokens=512,
temperature=0,
prompt=prompts_tokened,
timeout = None
)
ans = []
for item in results.choices:
ans.append([[x.strip() for x in item.text.split('|')]])
return ans
def get_ans(queries_ls, passages):
prompts = []
for i in range(len(queries_ls)):
prompts.append([
{"role": "system", "content": "You are a helpful assistant. Please answer the question to the best of your knowledge, even if the context does not directly provide the information. Use any relevant knowledge you have to provide a helpful answer."},
{"role": "user", "content": 'Context: ' + '\n'.join(passages[i][:3])},
{"role": "user", "content": 'Question: ' + queries_ls[i]},
])
pred_ls = [row[0] for row in call_llama3_func(prompts, max_decode_steps=100)]
return pred_ls
def hit_score(passages_ls, anspids, k):
assert len(passages_ls) == len(anspids)
cnt = 0
for i in range(len(passages_ls)):
retrieved_100_topk = passages_ls[i][:k]
ans_raw = anspids[i]
for ans in ans_raw:
if ans in retrieved_100_topk:
cnt += 1
break
return cnt / len(passages_ls)
def cover_em(predictions, ground_truths):
score = []
for i in range(len(predictions)):
pred = predictions[i].lower().strip()
gt_ls = ground_truths[i].lower().split(',')
for gt in gt_ls:
if gt in pred:
score.append(1)
break
else:
score.append(0)
return sum(score) / len(score)
def supervised_method():
sub_query_str_l = get_supervised_decom(raw_queries)
sub_query_str_l = filter_subqueries(sub_query_str_l, raw_queries)
pred_ls, re_imgs= get_eval_answer_llava(raw_queries, sub_query_str_l, ans_pids, patch_emb_by_img_ls)
detailed_results_df = pd.DataFrame(
list(
zip(
raw_queries,
sub_query_str_l,
true_answers,
pred_ls,
re_imgs,
)
),
columns=[
"raw_queries",
"sub_queries_ls",
"true_answer",
"pred_answers",
"re_imgs",
],
)
detailed_results_df.to_csv('supervised_method.csv')
return cover_em(pred_ls, true_answers)
def unsupervised_method():
sub_query_str_l = []
for query in tqdm(raw_queries):
url = 'http://127.0.0.1:50002/execute?query='+query
response = requests.get(url=url)
res_dic = response.json()
sub_query_str_l.append([res_dic['text']])
sub_query_str_l = filter_subqueries(sub_query_str_l, raw_queries)
# print(sub_query_str_l)
try:
pred_ls, re_imgs= get_eval_answer_llava(raw_queries, sub_query_str_l, ans_pids, patch_emb_by_img_ls)
except:
pass
detailed_results_df = pd.DataFrame(
list(
zip(
raw_queries,
sub_query_str_l,
true_answers,
pred_ls,
re_imgs,
)
),
columns=[
"raw_queries",
"sub_queries_ls",
"true_answer",
"pred_answers",
"re_imgs",
],
)
detailed_results_df.to_csv('unsupervised_method.csv')
return cover_em(pred_ls, true_answers)
def iclfeed_method():
sub_query_str_l = []
for query in tqdm(raw_queries):
url = 'http://127.0.0.1:50003/execute?query='+query
response = requests.get(url=url)
res_dic = response.json()
sub_query_str_l.append([res_dic['text']])
sub_query_str_l = filter_subqueries(sub_query_str_l, raw_queries)
try:
pred_ls, re_imgs= get_eval_answer_llava(raw_queries, sub_query_str_l, ans_pids, patch_emb_by_img_ls)
except:
pass
detailed_results_df = pd.DataFrame(
list(
zip(
raw_queries,
sub_query_str_l,
true_answers,
pred_ls,
re_imgs,
)
),
columns=[
"raw_queries",
"sub_queries_ls",
"true_answer",
"pred_answers",
"re_imgs",
],
)
detailed_results_df.to_csv('iclfeed_method.csv')
return cover_em(pred_ls, true_answers)
def dense_method():
sub_query_str_l = [[[raw]]for raw in raw_queries]
try:
pred_ls, re_imgs= get_eval_answer_llava(raw_queries, sub_query_str_l, ans_pids, patch_emb_by_img_ls)
except:
pass
detailed_results_df = pd.DataFrame(
list(
zip(
raw_queries,
sub_query_str_l,
true_answers,
pred_ls,
re_imgs,
)
),
columns=[
"raw_queries",
"sub_queries_ls",
"true_answer",
"pred_answers",
"re_imgs",
],
)
detailed_results_df.to_csv('dense_method.csv')
return cover_em(pred_ls, true_answers)
def colbert_method():
tmp = gen_prompt()
raw_op_prompts = call_llama3_func(tmp)
# print(raw_op_prompts[:3])
sub_queries_ls= []
for idx in range(len(raw_queries)):
tmp_ls = raw_op_prompts[idx][0].replace("\n", "").split(",")
tmp_ls = [list(set([item.strip() for item in tmp_ls if item.strip() and item.strip() in raw_queries[idx]]))]
if len(tmp_ls[0]) == 0:
tmp_ls = [[raw_queries[idx]]]
sub_queries_ls.append(tmp_ls)
try:
pred_ls, re_imgs= get_eval_answer_llava(raw_queries, sub_queries_ls, ans_pids, patch_emb_by_img_ls)
except:
pass
detailed_results_df = pd.DataFrame(
list(
zip(
raw_queries,
sub_queries_ls,
true_answers,
pred_ls,
re_imgs,
)
),
columns=[
"raw_queries",
"sub_queries_ls",
"true_answer",
"pred_answers",
"re_imgs",
],
)
detailed_results_df.to_csv('colbert_result.csv')
return cover_em(pred_ls, true_answers)
def colpali_method():
re_img_ls = []
for query in tqdm(raw_queries):
results = colpali.search(query, k=100)
re_img_ls.append([x['metadata'][0]['filename'] for x in results])
pred_ls = colbert_score(raw_queries, re_img_ls, ans_pids, dataset)
return cover_em(pred_ls, true_answers)
def gen_prompt():
prompts = []
for query in raw_queries:
prompt = []
prompt.append({"role": "system", "content": """"Given the input query, break it down into meaningful tokens like ColBERT. Ensure the tokens retain the key semantic components. Provide the output as a comma-separated list. Query: '{query}' Tokens:"""})
prompt.append({"role": "user", "content": "Query: Victoria Hong Kong has many what type of buildings?"})
prompt.append({"role": "assistant", "content": "Victoria, Hong, Kong, has, many, what, type, of, buildings,?"})
prompt.append({"role": "user", "content": f"Query: {query}" })
prompts.append(prompt)
return prompts
def without_method():
pred_ls = wo_llava_vllm(raw_queries)
return cover_em(pred_ls, true_answers)
if __name__ == '__main__':
dataset_path = ragqa_paths.dataset_file(dataset, f"{dataset}_test.csv")
tokenizer = AutoTokenizer.from_pretrained(ragqa_paths.LLAMA_MODEL)
client = OpenAI(api_key="0",base_url="http://127.0.0.1:50001/v1")
raw_data = pd.read_csv(dataset_path, header=0)
raw_data = raw_data.drop_duplicates(subset=['question'])
raw_queries = list(raw_data['question'])
true_answers = list(raw_data['answer'])
ans_pids = list(raw_data['image'])
# print(supervised_method())
# print(unsupervised_method())
# print(iclfeed_method())
# print(colbert_method())
# print(colpali_method())
print(dense_method())
# print(without_method())
|