Xu-AI4Science's picture
Upload log.json with huggingface_hub
863e9c9 verified
Raw History Blame Contribute Delete
7.03 kB
{
"config": {
"name": "esmc_300M",
"model_name": "Synthyra/ESMplusplus_small",
"pooling": "mean",
"space_residues": false,
"max_len": 2048,
"use_t5_encoder": false,
"use_automaskedlm": true,
"trust_remote_code": true
},
"result": {
"encoder": "esmc_300M",
"run_dir": "esmc_300M_sym_v2",
"run_tag": "sym_v2",
"model_name": "Synthyra/ESMplusplus_small",
"hidden_dim": 960,
"max_len": 2048,
"pooling": "mean",
"head": "mlp",
"moe_experts": null,
"moe_top_k": null,
"best_val_rmse": 1.343891979080109,
"val_rmse": 1.343891979080109,
"val_mae": 0.874987006187439,
"val_spearman": 0.8618226129144756,
"val_n": 666,
"s90_mae": 1.5350065231323242,
"s90_rmse": 2.0848605343945614,
"s90_pearson": 0.6011604733222113,
"s90_spearman": 0.5510109375406975,
"s90_n": 90,
"s79_mae": 1.5322797298431396,
"s79_rmse": 2.0387059627152926,
"s79_pearson": 0.698892595570155,
"s79_spearman": 0.7051683531133182,
"s79_n_complexes": 79,
"s79_n_pairs": 79,
"status": "ok"
},
"history": [
{
"epoch": 1,
"train_loss": 5.2500034169053755,
"rmse": 2.3560124366056368,
"mae": 1.936526894569397,
"spearman": 0.7146812219244423,
"n": 666
},
{
"epoch": 2,
"train_loss": 3.16614606161958,
"rmse": 1.8153762358070458,
"mae": 1.3361821174621582,
"spearman": 0.7877017189484826,
"n": 666
},
{
"epoch": 3,
"train_loss": 2.7385075062827213,
"rmse": 1.770573391254816,
"mae": 1.3470638990402222,
"spearman": 0.7908117287889782,
"n": 666
},
{
"epoch": 4,
"train_loss": 2.5775398382301797,
"rmse": 1.9354384745124416,
"mae": 1.4594480991363525,
"spearman": 0.7951679210899366,
"n": 666
},
{
"epoch": 5,
"train_loss": 2.296075133634992,
"rmse": 1.7771083130893897,
"mae": 1.3618661165237427,
"spearman": 0.7878699347478659,
"n": 666
},
{
"epoch": 6,
"train_loss": 2.1632901883809876,
"rmse": 1.571707641914237,
"mae": 1.0820832252502441,
"spearman": 0.8242117697646001,
"n": 666
},
{
"epoch": 7,
"train_loss": 2.0487842086902845,
"rmse": 1.7326433627220126,
"mae": 1.2997156381607056,
"spearman": 0.8067283923820779,
"n": 666
},
{
"epoch": 8,
"train_loss": 1.9539089389904762,
"rmse": 1.5323771007102422,
"mae": 1.0768132209777832,
"spearman": 0.8331224830364253,
"n": 666
},
{
"epoch": 9,
"train_loss": 1.884503437786536,
"rmse": 1.4836944626245834,
"mae": 1.0211477279663086,
"spearman": 0.8453298885675242,
"n": 666
},
{
"epoch": 10,
"train_loss": 1.7379148220976754,
"rmse": 1.5289483190800148,
"mae": 1.0419483184814453,
"spearman": 0.8279244517802901,
"n": 666
},
{
"epoch": 11,
"train_loss": 1.637459601849805,
"rmse": 1.50807899136166,
"mae": 1.0249881744384766,
"spearman": 0.8349588743741613,
"n": 666
},
{
"epoch": 12,
"train_loss": 1.570613271213623,
"rmse": 1.5877679493567813,
"mae": 1.047106385231018,
"spearman": 0.8173064320570957,
"n": 666
},
{
"epoch": 13,
"train_loss": 1.5191953086877446,
"rmse": 1.523368716521125,
"mae": 1.0183935165405273,
"spearman": 0.835533415298498,
"n": 666
},
{
"epoch": 14,
"train_loss": 1.4484552232677594,
"rmse": 1.4635659302932218,
"mae": 0.9944096207618713,
"spearman": 0.845873219852843,
"n": 666
},
{
"epoch": 15,
"train_loss": 1.3779972628416162,
"rmse": 1.4513941475237058,
"mae": 0.9942841529846191,
"spearman": 0.8415644130046825,
"n": 666
},
{
"epoch": 16,
"train_loss": 1.3456517325965984,
"rmse": 1.4878169259075829,
"mae": 1.0041481256484985,
"spearman": 0.8394071857523199,
"n": 666
},
{
"epoch": 17,
"train_loss": 1.283067804568361,
"rmse": 1.5455195335503902,
"mae": 1.0542510747909546,
"spearman": 0.8402040797740962,
"n": 666
},
{
"epoch": 18,
"train_loss": 1.2671775079257779,
"rmse": 1.4594022466497183,
"mae": 0.9660055041313171,
"spearman": 0.8463883766343031,
"n": 666
},
{
"epoch": 19,
"train_loss": 1.1808337405414078,
"rmse": 1.463115354014868,
"mae": 0.9558651447296143,
"spearman": 0.8468865940422482,
"n": 666
},
{
"epoch": 20,
"train_loss": 1.1422315512511436,
"rmse": 1.4254628283130863,
"mae": 0.9524824023246765,
"spearman": 0.8563309012442194,
"n": 666
},
{
"epoch": 21,
"train_loss": 1.082284438918762,
"rmse": 1.4807769535103399,
"mae": 0.9906092286109924,
"spearman": 0.8476697202161565,
"n": 666
},
{
"epoch": 22,
"train_loss": 1.0354805702359686,
"rmse": 1.528388015173751,
"mae": 1.04389226436615,
"spearman": 0.8509532998653907,
"n": 666
},
{
"epoch": 23,
"train_loss": 1.0098871153456515,
"rmse": 1.3559876693654447,
"mae": 0.9069312810897827,
"spearman": 0.8593247965836093,
"n": 666
},
{
"epoch": 24,
"train_loss": 0.9503703362235882,
"rmse": 1.343891979080109,
"mae": 0.874987006187439,
"spearman": 0.8618226129144756,
"n": 666
},
{
"epoch": 25,
"train_loss": 0.925024896347635,
"rmse": 1.4017211892269734,
"mae": 0.9141939282417297,
"spearman": 0.8530537717668791,
"n": 666
},
{
"epoch": 26,
"train_loss": 0.8724437099130326,
"rmse": 1.390283907088061,
"mae": 0.9096393585205078,
"spearman": 0.8577643334770891,
"n": 666
},
{
"epoch": 27,
"train_loss": 0.8766851046059907,
"rmse": 1.363666425359147,
"mae": 0.8954227566719055,
"spearman": 0.8578916719195002,
"n": 666
},
{
"epoch": 28,
"train_loss": 0.8230470686901363,
"rmse": 1.385749370618165,
"mae": 0.9481036067008972,
"spearman": 0.8584835841364484,
"n": 666
},
{
"epoch": 29,
"train_loss": 0.8009588031335821,
"rmse": 1.4175805435307196,
"mae": 0.937690794467926,
"spearman": 0.8479630893759342,
"n": 666
},
{
"epoch": 30,
"train_loss": 0.7837735650966295,
"rmse": 1.3701328486052542,
"mae": 0.8667737245559692,
"spearman": 0.8634084967125738,
"n": 666
},
{
"epoch": 31,
"train_loss": 0.7858880045990005,
"rmse": 1.3988896070666528,
"mae": 0.9008198976516724,
"spearman": 0.8655306318431181,
"n": 666
}
]
}