kcat-km-model-ext / Dockerfile
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FROM python:3.11-slim
ENV PYTHONUNBUFFERED=1 \
OMP_NUM_THREADS=2 \
NTHREADS=2 \
HF_HOME=/tmp/hf \
HF_HUB_OFFLINE=1 \
TRANSFORMERS_OFFLINE=1 \
TOKENIZERS_PARALLELISM=false
WORKDIR /app
# lightgbm needs this system library
RUN apt-get update && apt-get install -y --no-install-recommends libgomp1 \
&& rm -rf /var/lib/apt/lists/*
# --- ESM block: DELETE these 2 lines (and the 'transformers' line in requirements.txt) for Stage 1 ---
RUN pip install --no-cache-dir torch==2.4.1 --index-url https://download.pytorch.org/whl/cpu
# --- end ESM block ---
COPY requirements.txt .
RUN pip install --no-cache-dir -r requirements.txt
COPY features.py predict.py ./
COPY weights ./weights