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| # Run AFTER training stops (GPU free). Evaluates BASE on the A100 eval sets, merges the | |
| # chosen LoRA checkpoint, and evaluates the MERGED model on the same sets -> authoritative | |
| # base-vs-merged comparison (identical sets, same sample). | |
| # Usage: bash finalize.sh <checkpoint-dir> | |
| set -uo pipefail | |
| cd /workspace/infosec | |
| export HF_HOME=/workspace/hf-cache HF_HUB_CACHE=/workspace/hf-cache/hub PYTHONUNBUFFERED=1 | |
| CKPT="${1:?usage: finalize.sh <checkpoint-dir>}" | |
| EVALS="--eval data/eval/vuln_detection_test.jsonl --eval data/eval/knowledge_mcq.jsonl --eval data/eval/mmlu_security.jsonl --eval data/eval/mmlu_general.jsonl --report-dir reports/eval --sample 50 --max-new-tokens 256" | |
| echo "== [1/3] eval BASE on A100 eval sets ==" | |
| python training/scripts/eval_hf_model.py --model Qwen/Qwen3.6-27B --label base_a100 $EVALS | |
| echo "== [2/3] merge checkpoint $CKPT ==" | |
| python training/scripts/merge_lora.py --config training/configs/stage1_a100.yaml --adapter "$CKPT" | |
| echo "== [3/3] eval MERGED ==" | |
| python training/scripts/eval_hf_model.py --model /workspace/checkpoints/qwen36_a100_stage1_merged --label merged $EVALS | |
| echo "== comparison (base vs merged, per eval set) ==" | |
| python3 - <<'PY' | |
| import json, os | |
| def by_file(p): | |
| try: | |
| d = json.load(open(p)) | |
| except Exception as e: | |
| return {"_err": str(e)} | |
| out = {} | |
| for r in d.get("results", []): | |
| name = os.path.basename(r.get("file", r.get("kind", "?"))).replace(".jsonl", "") | |
| if "accuracy" in r: | |
| cell = f"acc={round(r['accuracy'],3)}" | |
| if r.get("kind") == "vuln_detection": | |
| cell += f" f1={round(r.get('f1_vuln',0),3)}" | |
| out[name] = cell | |
| else: | |
| out[name] = r.get("error", "?") | |
| return out | |
| b = by_file("reports/eval/base_a100_eval.json") | |
| m = by_file("reports/eval/merged_eval.json") | |
| keys = sorted(set(b) | set(m)) | |
| print(f"{'eval set':28} {'BASE':22} {'MERGED':22}") | |
| for k in keys: | |
| print(f"{k:28} {str(b.get(k,'-')):22} {str(m.get(k,'-')):22}") | |
| PY | |
| echo FINALIZE_DONE | |