File size: 11,387 Bytes
13e2749 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 | """Test 8: how far must λ_L1 be reduced before DAB and UNI become meaningful?
Same setup as test 7 (saved Adam state from C7 best_uni_step6500.pt, 4 batches
of 8 tiles). Sweep λ_L1 in {25, 15, 10, 5}. For each:
* Compute influence P_L1, P_UNI, P_DAB, P_HF via leave-one-out counterfactual
(using saved Adam moments)
* Total update norm ||Δθ_all||_2
* cos(Δθ_all(λ), Δθ_all(25)) — how much the update rotates as we tame L1
* head_conv per-block breakdown
Other lambdas unchanged: λ_UNI=0.25, λ_DAB=1.0, λ_HF=0.01.
"""
import os, sys, glob, random, math, json, copy, time
sys.path.insert(0, "/home/ubuntu/work")
from pathlib import Path
import numpy as np
import torch
import torch.nn as nn
import torch.nn.functional as F
from PIL import Image
from src_ds_her2_thunder import UniDwtC7, UNI2HSpatialLoss, StainDeconvDAB
from pytorch_wavelets import DWTForward
DEVICE = "cuda"
DATA = "/home/ubuntu/her2_data"
CKPT = "/home/ubuntu/ckpts/c7_best.pt"
BATCH = 8
K_BATCHES = 4
SEED = 42
LR = 2e-4
LAMBDAS_L1 = [25, 15, 10, 5]
LOSSES = ["L1", "UNI", "DAB", "HF"]
print("Loading UNI-2H + C7 + saved optimizer state ...", flush=True)
uni_loss = UNI2HSpatialLoss(target_size=224).to(DEVICE).eval()
for p in uni_loss.uni.parameters(): p.requires_grad_(False)
G = UniDwtC7(
uni_module=uni_loss.uni, wavelet="haar", taps=(13, 19),
dec_ch=(512, 384, 256, 128, 64), skip_ch=(384, 256, 128),
blocks_per_stage=(4, 3, 3, 2, 2), uni_target_size=224,
).to(DEVICE).train()
ck = torch.load(CKPT, map_location=DEVICE, weights_only=False)
G.load_state_dict(ck["model"], strict=False)
for n, p in G.named_parameters():
p.requires_grad_(not n.startswith("uni."))
saved_opt_state = ck["optimizer"]
print(f" model @ step={ck['step']} optimizer states={len(saved_opt_state['state'])}", flush=True)
stain_dab = StainDeconvDAB().to(DEVICE).eval()
dwt = DWTForward(J=2, wave="haar", mode="periodization").to(DEVICE)
BLOCK_TARGETS = [
"dwt_skips.enc_sk4", "dwt_skips.enc_sk3", "dwt_skips.enc_sk2",
"decoder.stem", "decoder.stage1", "decoder.up1", "decoder.fuse2",
"decoder.stage2", "decoder.stage3", "decoder.stage4", "decoder.stage5",
"decoder.head_conv",
]
named = dict(G.named_modules())
def _block_of(pname):
for tgt in BLOCK_TARGETS:
if pname.startswith(tgt + "."):
return tgt
return None
trainable = [(n, p) for n, p in G.named_parameters() if p.requires_grad]
def compute_loss_terms(gens, ihcs, lam_L1=25.0):
l1 = F.l1_loss(gens, ihcs) * lam_L1
unic = uni_loss(gens, target=ihcs) * 0.25
dab = F.l1_loss(stain_dab(gens), stain_dab(ihcs)) * 1.0
ylg, yhg = dwt((gens + 1) * 0.5)
ylt, yht = dwt((ihcs + 1) * 0.5)
hf = F.l1_loss(yhg[0], yht[0]) * 0.01 + F.l1_loss(yhg[1], yht[1]) * 0.01
return dict(L1=l1, UNI=unic, DAB=dab, HF=hf)
def _load_pair(p):
he = Image.open(p.replace("/IHC/", "/HE/")).convert("RGB").resize((256, 256), Image.BICUBIC)
ic = Image.open(p).convert("RGB").resize((256, 256), Image.BICUBIC)
return (torch.from_numpy(np.asarray(he, dtype=np.float32) / 255.).permute(2, 0, 1) * 2 - 1,
torch.from_numpy(np.asarray(ic, dtype=np.float32) / 255.).permute(2, 0, 1) * 2 - 1)
def _bf(pth):
im = Image.open(pth).convert("RGB").resize((256, 256), Image.BICUBIC)
x = torch.from_numpy(np.asarray(im, dtype=np.float32) / 255.).permute(2, 0, 1).unsqueeze(0) * 2 - 1
with torch.no_grad():
return float((stain_dab(x.to(DEVICE)) > 0.3).float().mean().item())
def _slide(p): return Path(p).name.split("_")[0]
random.seed(SEED); np.random.seed(SEED); torch.manual_seed(SEED)
ihc = sorted(glob.glob(f"{DATA}/IHC/val/*.jpg"))
pool = random.sample(ihc, min(len(ihc), 1500))
scan = [(p, _bf(p)) for p in pool]
by_p, by_n = {}, {}
for p, s in scan:
sid = _slide(p)
if s > 0.1: by_p.setdefault(sid, []).append(p)
elif s < 0.01: by_n.setdefault(sid, []).append(p)
def _bal(bs, N):
out = []; slides = list(bs.keys()); random.shuffle(slides)
while len(out) < N and slides:
for s in list(slides):
if not bs[s]: slides.remove(s); continue
out.append(bs[s].pop())
if len(out) >= N: break
return out
her2p = _bal(by_p, 64); her2n = _bal(by_n, 64)
picks = her2p + her2n
random.shuffle(picks)
picks = picks[:K_BATCHES * BATCH]
print(f"tiles: {len(picks)}", flush=True)
def _snapshot_model():
return {n: p.detach().clone() for n, p in G.named_parameters() if p.requires_grad}
def _restore_model(snap):
with torch.no_grad():
for n, p in G.named_parameters():
if n in snap:
p.data.copy_(snap[n])
def _mk_opt_with_saved_state():
opt = torch.optim.AdamW([p for _, p in trainable], lr=LR)
sd = copy.deepcopy(saved_opt_state)
try:
opt.load_state_dict(sd)
except Exception:
saved_ids = sd["param_groups"][0]["params"]
new_ids = opt.state_dict()["param_groups"][0]["params"]
new_sd = {"param_groups": opt.state_dict()["param_groups"], "state": {}}
for old_id, new_id in zip(saved_ids, new_ids):
if old_id in sd["state"]:
new_sd["state"][new_id] = sd["state"][old_id]
opt.load_state_dict(new_sd)
return opt
def _flatten_delta(pre, post):
return {n: (post[n] - pre[n]).flatten() for n in pre}
# =============================================================================
# Sweep
# =============================================================================
# For cosine-vs-original, we need delta_all(λ=25) as reference for each batch.
per_lambda_results = {lam: {"per_batch": []} for lam in LAMBDAS_L1}
ref_deltas_batch = [] # delta_all at λ_L1=25, one per batch
t0 = time.time()
for bi in range(K_BATCHES):
print(f"\n--- batch {bi+1}/{K_BATCHES} ---", flush=True)
chunk = picks[bi * BATCH:(bi + 1) * BATCH]
pairs = [_load_pair(p) for p in chunk]
hes = torch.stack([p[0] for p in pairs]).to(DEVICE)
ihcs = torch.stack([p[1] for p in pairs]).to(DEVICE)
pre_params = _snapshot_model()
for lam_L1 in LAMBDAS_L1:
# delta_all with this lambda
opt = _mk_opt_with_saved_state()
G.zero_grad(set_to_none=True)
gens = G(hes)
terms = compute_loss_terms(gens, ihcs, lam_L1=lam_L1)
total = sum(terms.values())
total.backward()
opt.step()
delta_all = _flatten_delta(pre_params, {n: p.detach().clone() for n, p in G.named_parameters() if p.requires_grad})
_restore_model(pre_params)
# Leave-one-out per loss
per_loss_delta = {}
for skip in LOSSES:
_restore_model(pre_params)
opt = _mk_opt_with_saved_state()
G.zero_grad(set_to_none=True)
gens = G(hes)
terms = compute_loss_terms(gens, ihcs, lam_L1=lam_L1)
total_minus = sum(v for k, v in terms.items() if k != skip)
total_minus.backward()
opt.step()
per_loss_delta[skip] = _flatten_delta(pre_params, {n: p.detach().clone() for n, p in G.named_parameters() if p.requires_grad})
_restore_model(pre_params)
# Influence per loss + per block
overall_inf = {loss: 0.0 for loss in LOSSES}
per_block_inf = {loss: {tgt: 0.0 for tgt in BLOCK_TARGETS} for loss in LOSSES}
with torch.no_grad():
for pname, _ in trainable:
d_all = delta_all[pname]
for loss in LOSSES:
diff = (d_all - per_loss_delta[loss][pname]).norm().pow(2).item()
overall_inf[loss] += diff
blk = _block_of(pname)
if blk is not None:
per_block_inf[loss][blk] += diff
for loss in LOSSES:
overall_inf[loss] = math.sqrt(overall_inf[loss])
for blk in BLOCK_TARGETS:
per_block_inf[loss][blk] = math.sqrt(per_block_inf[loss][blk])
# Total update norm ||Δθ_all||_2
with torch.no_grad():
update_norm_sq = 0.0
flat_all_pieces = []
for pname, _ in trainable:
v = delta_all[pname]
update_norm_sq += float(v.pow(2).sum().item())
flat_all_pieces.append(v)
update_norm = math.sqrt(update_norm_sq)
flat_all = torch.cat(flat_all_pieces)
# Save reference at λ=25 for this batch
if lam_L1 == 25:
ref_deltas_batch.append(flat_all.clone())
cos_vs_ref = 1.0
else:
ref = ref_deltas_batch[bi]
cos_vs_ref = float((flat_all @ ref) / (flat_all.norm() * ref.norm() + 1e-12))
tot_i = sum(overall_inf.values()) + 1e-30
entry = dict(
overall=overall_inf, per_block=per_block_inf,
update_norm=update_norm, cos_vs_ref_lambda25=cos_vs_ref,
overall_pct={loss: overall_inf[loss] / tot_i * 100 for loss in LOSSES},
)
per_lambda_results[lam_L1]["per_batch"].append(entry)
print(f" λ_L1={lam_L1:>3} P(L1)={entry['overall_pct']['L1']:>5.1f}% "
f"P(UNI)={entry['overall_pct']['UNI']:>4.1f}% "
f"P(DAB)={entry['overall_pct']['DAB']:>4.1f}% "
f"P(HF)={entry['overall_pct']['HF']:>4.1f}% "
f"||Δθ||={update_norm:.3f} cos={cos_vs_ref:.4f}", flush=True)
# =============================================================================
# Aggregate + report
# =============================================================================
print("\n" + "=" * 80)
print(f"{'λ_L1':>5} {'P(L1)':>7} {'P(UNI)':>7} {'P(DAB)':>7} {'P(HF)':>6}"
f" {'||Δθ||':>10} {'cos vs λ25':>10}")
print("-" * 80)
final = {}
for lam in LAMBDAS_L1:
batches = per_lambda_results[lam]["per_batch"]
avg_pct = {loss: float(np.mean([b["overall_pct"][loss] for b in batches])) for loss in LOSSES}
avg_norm = float(np.mean([b["update_norm"] for b in batches]))
avg_cos = float(np.mean([b["cos_vs_ref_lambda25"] for b in batches]))
per_block_pct_avg = {}
for tgt in BLOCK_TARGETS:
row_avg = {}
for loss in LOSSES:
row_avg[loss] = float(np.mean([b["per_block"][loss][tgt] for b in batches]))
row_tot = sum(row_avg.values()) + 1e-30
per_block_pct_avg[tgt] = {loss: row_avg[loss] / row_tot * 100 for loss in LOSSES}
final[lam] = dict(overall_pct=avg_pct, update_norm=avg_norm,
cos_vs_ref_lambda25=avg_cos,
per_block_pct=per_block_pct_avg)
print(f"{lam:>5} {avg_pct['L1']:>6.2f}% {avg_pct['UNI']:>6.2f}% {avg_pct['DAB']:>6.2f}% "
f" {avg_pct['HF']:>5.2f}% {avg_norm:>10.4f} {avg_cos:>10.4f}")
print("\nHead_conv per-loss share by lambda:")
print(f"{'λ_L1':>5} {'P(L1)':>7} {'P(UNI)':>7} {'P(DAB)':>7} {'P(HF)':>6}")
for lam in LAMBDAS_L1:
row = final[lam]["per_block_pct"]["decoder.head_conv"]
print(f"{lam:>5} {row['L1']:>6.2f}% {row['UNI']:>6.2f}% {row['DAB']:>6.2f}% {row['HF']:>5.2f}%")
outp = Path("/home/ubuntu/work/test8_lambda_L1_sweep.json")
outp.write_text(json.dumps({"config": {"lambdas": LAMBDAS_L1, "K_batches": K_BATCHES,
"batch": BATCH, "lr": LR},
"results": final}, indent=2))
print(f"\nSaved: {outp}")
print(f"Wall: {time.time() - t0:.0f}s")
|