Add LUMINA cancer classification checkpoints
Browse filesAdd linear-probe and full-fine-tuning inference checkpoints with integrity and input metadata.
- fullfinetune_mammo_FM_image_encoder/lumina/cancer_classification/README.md +9 -0
- fullfinetune_mammo_FM_image_encoder/lumina/cancer_classification/checkpoint/mammo_fm_lumina_cancer_full_finetune_seed10_fold0_best_validation_auroc.pth +3 -0
- fullfinetune_mammo_FM_image_encoder/lumina/cancer_classification/release_metadata.json +30 -0
- linear_probe_mammo_FM_image_encoder/lumina/cancer_classification/README.md +9 -0
- linear_probe_mammo_FM_image_encoder/lumina/cancer_classification/checkpoint/mammo_fm_lumina_cancer_linear_probe_seed10_fold0_best_validation_auroc.pth +3 -0
- linear_probe_mammo_FM_image_encoder/lumina/cancer_classification/release_metadata.json +30 -0
fullfinetune_mammo_FM_image_encoder/lumina/cancer_classification/README.md
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# LUMINA cancer classification — Full fine-tuning
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Mammo-FM EfficientNet-B5 image encoder with a binary cancer-classification head.
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The checkpoint was selected by validation AUROC from a completed nine-epoch run using the full training split (seed 10, fold 0). Input geometry is 1520 pixels high × 912 pixels wide, with three image channels. The model returns one logit per image; apply sigmoid for its cancer score.
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Checkpoint: [`mammo_fm_lumina_cancer_full_finetune_seed10_fold0_best_validation_auroc.pth`](checkpoint/mammo_fm_lumina_cancer_full_finetune_seed10_fold0_best_validation_auroc.pth). Integrity and input metadata are in [`release_metadata.json`](release_metadata.json).
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The checkpoint contains model tensors and simple inference metadata only. It can be loaded with `torch.load(..., weights_only=True)` or the Mammo-FM strict classifier backend. For research use; not a standalone clinical device.
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fullfinetune_mammo_FM_image_encoder/lumina/cancer_classification/checkpoint/mammo_fm_lumina_cancer_full_finetune_seed10_fold0_best_validation_auroc.pth
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version https://git-lfs.github.com/spec/v1
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oid sha256:7d8ace59af336932ac3887f5028ae5923a837764128dba70ebb5d29e80ef5e06
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size 114438790
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fullfinetune_mammo_FM_image_encoder/lumina/cancer_classification/release_metadata.json
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{
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"release_schema_version": 1,
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"dataset": "LUMINA",
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"task": "cancer",
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"method": "full_finetune",
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"model": "Mammo-FM EfficientNet-B5 image encoder with binary classification head",
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"checkpoint_file": "checkpoint/mammo_fm_lumina_cancer_full_finetune_seed10_fold0_best_validation_auroc.pth",
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"checkpoint_sha256": "7d8ace59af336932ac3887f5028ae5923a837764128dba70ebb5d29e80ef5e06",
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"checkpoint_bytes": 114438790,
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"checkpoint_selection": "best validation AUROC",
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"selected_epoch": 4,
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"training_epochs": 9,
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"seed": 10,
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"fold": 0,
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"data_fraction": 1.0,
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"image_size_hw": [
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1520,
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912
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],
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"input_channels": 3,
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"feature_dimension": 2048,
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"output_classes": 1,
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"output_activation": "sigmoid",
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"normalization_mean": 0.3089279,
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"normalization_std": 0.25053555408335154,
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"initialization_checkpoint_filename": "Mammo-FM_BatmanlabTrained_CLIP.tar",
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"model_tensor_count": 854,
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"strict_mammofm_load": "PASS",
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"source_model_tensor_equality": "PASS"
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}
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linear_probe_mammo_FM_image_encoder/lumina/cancer_classification/README.md
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# LUMINA cancer classification — Linear probe
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Mammo-FM EfficientNet-B5 image encoder with a binary cancer-classification head.
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The checkpoint was selected by validation AUROC from a completed nine-epoch run using the full training split (seed 10, fold 0). Input geometry is 1520 pixels high × 912 pixels wide, with three image channels. The model returns one logit per image; apply sigmoid for its cancer score.
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Checkpoint: [`mammo_fm_lumina_cancer_linear_probe_seed10_fold0_best_validation_auroc.pth`](checkpoint/mammo_fm_lumina_cancer_linear_probe_seed10_fold0_best_validation_auroc.pth). Integrity and input metadata are in [`release_metadata.json`](release_metadata.json).
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The checkpoint contains model tensors and simple inference metadata only. It can be loaded with `torch.load(..., weights_only=True)` or the Mammo-FM strict classifier backend. For research use; not a standalone clinical device.
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linear_probe_mammo_FM_image_encoder/lumina/cancer_classification/checkpoint/mammo_fm_lumina_cancer_linear_probe_seed10_fold0_best_validation_auroc.pth
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version https://git-lfs.github.com/spec/v1
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oid sha256:416b7eff952bff6101480e1a074188a243a74009cb4d75b13eb5f1f551821fa6
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size 114434220
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linear_probe_mammo_FM_image_encoder/lumina/cancer_classification/release_metadata.json
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{
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"release_schema_version": 1,
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"dataset": "LUMINA",
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"task": "cancer",
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"method": "linear_probe",
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"model": "Mammo-FM EfficientNet-B5 image encoder with binary classification head",
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"checkpoint_file": "checkpoint/mammo_fm_lumina_cancer_linear_probe_seed10_fold0_best_validation_auroc.pth",
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"checkpoint_sha256": "416b7eff952bff6101480e1a074188a243a74009cb4d75b13eb5f1f551821fa6",
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"checkpoint_bytes": 114434220,
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"checkpoint_selection": "best validation AUROC",
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"selected_epoch": 8,
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"training_epochs": 9,
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"seed": 10,
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"fold": 0,
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"data_fraction": 1.0,
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"image_size_hw": [
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1520,
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912
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],
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"input_channels": 3,
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"feature_dimension": 2048,
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"output_classes": 1,
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"output_activation": "sigmoid",
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"normalization_mean": 0.3089279,
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"normalization_std": 0.25053555408335154,
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"initialization_checkpoint_filename": "Mammo-FM_BatmanlabTrained_CLIP.tar",
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"model_tensor_count": 854,
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"strict_mammofm_load": "PASS",
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"source_model_tensor_equality": "PASS"
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}
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