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| # Copyright (c) MONAI Consortium | |
| # Licensed under the Apache License, Version 2.0 (the "License"); | |
| # you may not use this file except in compliance with the License. | |
| # You may obtain a copy of the License at | |
| # http://www.apache.org/licenses/LICENSE-2.0 | |
| # Unless required by applicable law or agreed to in writing, software | |
| # distributed under the License is distributed on an "AS IS" BASIS, | |
| # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | |
| # See the License for the specific language governing permissions and | |
| # limitations under the License. | |
| from __future__ import annotations | |
| from typing import TYPE_CHECKING, Any, Callable, Iterable, Sequence | |
| import torch | |
| from monai.engines.utils import IterationEvents, default_metric_cmp_fn, default_prepare_batch | |
| from monai.inferers import Inferer, SimpleInferer | |
| from monai.transforms import Transform | |
| from monai.utils import IgniteInfo, min_version, optional_import | |
| from monai.utils.enums import CommonKeys, GanKeys | |
| from torch.optim.optimizer import Optimizer | |
| from torch.utils.data import DataLoader | |
| if TYPE_CHECKING: | |
| from ignite.engine import Engine, EventEnum | |
| from ignite.metrics import Metric | |
| else: | |
| Engine, _ = optional_import("ignite.engine", IgniteInfo.OPT_IMPORT_VERSION, min_version, "Engine") | |
| Metric, _ = optional_import("ignite.metrics", IgniteInfo.OPT_IMPORT_VERSION, min_version, "Metric") | |
| EventEnum, _ = optional_import("ignite.engine", IgniteInfo.OPT_IMPORT_VERSION, min_version, "EventEnum") | |
| from monai.engines.trainer import SupervisedTrainer, Trainer | |
| class VaeGanTrainer(Trainer): | |
| """ | |
| Generative adversarial network training based on Goodfellow et al. 2014 https://arxiv.org/abs/1406.266, | |
| inherits from ``Trainer`` and ``Workflow``. | |
| Training Loop: for each batch of data size `m` | |
| 1. Generate `m` fakes from random latent codes. | |
| 2. Update discriminator with these fakes and current batch reals, repeated d_train_steps times. | |
| 3. If g_update_latents, generate `m` fakes from new random latent codes. | |
| 4. Update generator with these fakes using discriminator feedback. | |
| Args: | |
| device: an object representing the device on which to run. | |
| max_epochs: the total epoch number for engine to run. | |
| train_data_loader: Core ignite engines uses `DataLoader` for training loop batchdata. | |
| g_network: generator (G) network architecture. | |
| g_optimizer: G optimizer function. | |
| g_loss_function: G loss function for optimizer. | |
| d_network: discriminator (D) network architecture. | |
| d_optimizer: D optimizer function. | |
| d_loss_function: D loss function for optimizer. | |
| epoch_length: number of iterations for one epoch, default to `len(train_data_loader)`. | |
| g_inferer: inference method to execute G model forward. Defaults to ``SimpleInferer()``. | |
| d_inferer: inference method to execute D model forward. Defaults to ``SimpleInferer()``. | |
| d_train_steps: number of times to update D with real data minibatch. Defaults to ``1``. | |
| latent_shape: size of G input latent code. Defaults to ``64``. | |
| non_blocking: if True and this copy is between CPU and GPU, the copy may occur asynchronously | |
| with respect to the host. For other cases, this argument has no effect. | |
| d_prepare_batch: callback function to prepare batchdata for D inferer. | |
| Defaults to return ``GanKeys.REALS`` in batchdata dict. for more details please refer to: | |
| https://pytorch.org/ignite/generated/ignite.engine.create_supervised_trainer.html. | |
| g_prepare_batch: callback function to create batch of latent input for G inferer. | |
| Defaults to return random latents. for more details please refer to: | |
| https://pytorch.org/ignite/generated/ignite.engine.create_supervised_trainer.html. | |
| g_update_latents: Calculate G loss with new latent codes. Defaults to ``True``. | |
| iteration_update: the callable function for every iteration, expect to accept `engine` | |
| and `engine.state.batch` as inputs, return data will be stored in `engine.state.output`. | |
| if not provided, use `self._iteration()` instead. for more details please refer to: | |
| https://pytorch.org/ignite/generated/ignite.engine.engine.Engine.html. | |
| postprocessing: execute additional transformation for the model output data. | |
| Typically, several Tensor based transforms composed by `Compose`. | |
| key_train_metric: compute metric when every iteration completed, and save average value to | |
| engine.state.metrics when epoch completed. key_train_metric is the main metric to compare and save the | |
| checkpoint into files. | |
| additional_metrics: more Ignite metrics that also attach to Ignite Engine. | |
| metric_cmp_fn: function to compare current key metric with previous best key metric value, | |
| it must accept 2 args (current_metric, previous_best) and return a bool result: if `True`, will update | |
| `best_metric` and `best_metric_epoch` with current metric and epoch, default to `greater than`. | |
| train_handlers: every handler is a set of Ignite Event-Handlers, must have `attach` function, like: | |
| CheckpointHandler, StatsHandler, etc. | |
| decollate: whether to decollate the batch-first data to a list of data after model computation, | |
| recommend `decollate=True` when `postprocessing` uses components from `monai.transforms`. | |
| default to `True`. | |
| optim_set_to_none: when calling `optimizer.zero_grad()`, instead of setting to zero, set the grads to None. | |
| more details: https://pytorch.org/docs/stable/generated/torch.optim.Optimizer.zero_grad.html. | |
| to_kwargs: dict of other args for `prepare_batch` API when converting the input data, except for | |
| `device`, `non_blocking`. | |
| amp_kwargs: dict of the args for `torch.cuda.amp.autocast()` API, for more details: | |
| https://pytorch.org/docs/stable/amp.html#torch.cuda.amp.autocast. | |
| """ | |
| def __init__( | |
| self, | |
| device: str | torch.device, | |
| max_epochs: int, | |
| train_data_loader: DataLoader, | |
| g_network: torch.nn.Module, | |
| g_optimizer: Optimizer, | |
| g_loss_function: Callable, | |
| d_network: torch.nn.Module, | |
| d_optimizer: Optimizer, | |
| d_loss_function: Callable, | |
| epoch_length: int | None = None, | |
| g_inferer: Inferer | None = None, | |
| d_inferer: Inferer | None = None, | |
| d_train_steps: int = 1, | |
| latent_shape: int = 64, | |
| non_blocking: bool = False, | |
| d_prepare_batch: Callable = default_prepare_batch, | |
| g_prepare_batch: Callable = default_prepare_batch, | |
| g_update_latents: bool = True, | |
| iteration_update: Callable[[Engine, Any], Any] | None = None, | |
| postprocessing: Transform | None = None, | |
| key_train_metric: dict[str, Metric] | None = None, | |
| additional_metrics: dict[str, Metric] | None = None, | |
| metric_cmp_fn: Callable = default_metric_cmp_fn, | |
| train_handlers: Sequence | None = None, | |
| decollate: bool = True, | |
| optim_set_to_none: bool = False, | |
| to_kwargs: dict | None = None, | |
| amp_kwargs: dict | None = None, | |
| ): | |
| if not isinstance(train_data_loader, DataLoader): | |
| raise ValueError("train_data_loader must be PyTorch DataLoader.") | |
| # set up Ignite engine and environments | |
| super().__init__( | |
| device=device, | |
| max_epochs=max_epochs, | |
| data_loader=train_data_loader, | |
| epoch_length=epoch_length, | |
| non_blocking=non_blocking, | |
| prepare_batch=d_prepare_batch, | |
| iteration_update=iteration_update, | |
| key_metric=key_train_metric, | |
| additional_metrics=additional_metrics, | |
| metric_cmp_fn=metric_cmp_fn, | |
| handlers=train_handlers, | |
| postprocessing=postprocessing, | |
| decollate=decollate, | |
| to_kwargs=to_kwargs, | |
| amp_kwargs=amp_kwargs, | |
| ) | |
| self.g_network = g_network | |
| self.g_optimizer = g_optimizer | |
| self.g_loss_function = g_loss_function | |
| self.g_inferer = SimpleInferer() if g_inferer is None else g_inferer | |
| self.d_network = d_network | |
| self.d_optimizer = d_optimizer | |
| self.d_loss_function = d_loss_function | |
| self.d_inferer = SimpleInferer() if d_inferer is None else d_inferer | |
| self.d_train_steps = d_train_steps | |
| self.latent_shape = latent_shape | |
| self.g_prepare_batch = g_prepare_batch | |
| self.g_update_latents = g_update_latents | |
| self.optim_set_to_none = optim_set_to_none | |
| def _iteration( | |
| self, engine: VaeGanTrainer, batchdata: dict | Sequence | |
| ) -> dict[str, torch.Tensor | int | float | bool]: | |
| """ | |
| Callback function for Adversarial Training processing logic of 1 iteration in Ignite Engine. | |
| Args: | |
| engine: `VaeGanTrainer` to execute operation for an iteration. | |
| batchdata: input data for this iteration, usually can be dictionary or tuple of Tensor data. | |
| Raises: | |
| ValueError: must provide batch data for current iteration. | |
| """ | |
| if batchdata is None: | |
| raise ValueError("must provide batch data for current iteration.") | |
| d_input = engine.prepare_batch(batchdata, engine.state.device, engine.non_blocking, **engine.to_kwargs)[0] | |
| g_input = d_input | |
| g_output, z_mu, z_sigma = engine.g_inferer(g_input, engine.g_network) | |
| # Train Discriminator | |
| d_total_loss = torch.zeros(1) | |
| for _ in range(engine.d_train_steps): | |
| engine.d_optimizer.zero_grad(set_to_none=engine.optim_set_to_none) | |
| dloss = engine.d_loss_function(g_output, d_input) | |
| dloss.backward() | |
| engine.d_optimizer.step() | |
| d_total_loss += dloss.item() | |
| # Train Generator | |
| engine.g_optimizer.zero_grad(set_to_none=engine.optim_set_to_none) | |
| g_loss = engine.g_loss_function(g_output, g_input, z_mu, z_sigma) | |
| g_loss.backward() | |
| engine.g_optimizer.step() | |
| return { | |
| GanKeys.REALS: d_input, | |
| GanKeys.FAKES: g_output, | |
| GanKeys.LATENTS: g_input, | |
| GanKeys.GLOSS: g_loss.item(), | |
| GanKeys.DLOSS: d_total_loss.item(), | |
| } | |
| class LDMTrainer(SupervisedTrainer): | |
| """ | |
| Standard supervised training method with image and label, inherits from ``Trainer`` and ``Workflow``. | |
| Args: | |
| device: an object representing the device on which to run. | |
| max_epochs: the total epoch number for trainer to run. | |
| train_data_loader: Ignite engine use data_loader to run, must be Iterable or torch.DataLoader. | |
| network: network to train in the trainer, should be regular PyTorch `torch.nn.Module`. | |
| optimizer: the optimizer associated to the network, should be regular PyTorch optimizer from `torch.optim` | |
| or its subclass. | |
| loss_function: the loss function associated to the optimizer, should be regular PyTorch loss, | |
| which inherit from `torch.nn.modules.loss`. | |
| epoch_length: number of iterations for one epoch, default to `len(train_data_loader)`. | |
| non_blocking: if True and this copy is between CPU and GPU, the copy may occur asynchronously | |
| with respect to the host. For other cases, this argument has no effect. | |
| prepare_batch: function to parse expected data (usually `image`, `label` and other network args) | |
| from `engine.state.batch` for every iteration, for more details please refer to: | |
| https://pytorch.org/ignite/generated/ignite.engine.create_supervised_trainer.html. | |
| iteration_update: the callable function for every iteration, expect to accept `engine` | |
| and `engine.state.batch` as inputs, return data will be stored in `engine.state.output`. | |
| if not provided, use `self._iteration()` instead. for more details please refer to: | |
| https://pytorch.org/ignite/generated/ignite.engine.engine.Engine.html. | |
| inferer: inference method that execute model forward on input data, like: SlidingWindow, etc. | |
| postprocessing: execute additional transformation for the model output data. | |
| Typically, several Tensor based transforms composed by `Compose`. | |
| key_train_metric: compute metric when every iteration completed, and save average value to | |
| engine.state.metrics when epoch completed. key_train_metric is the main metric to compare and save the | |
| checkpoint into files. | |
| additional_metrics: more Ignite metrics that also attach to Ignite Engine. | |
| metric_cmp_fn: function to compare current key metric with previous best key metric value, | |
| it must accept 2 args (current_metric, previous_best) and return a bool result: if `True`, will update | |
| `best_metric` and `best_metric_epoch` with current metric and epoch, default to `greater than`. | |
| train_handlers: every handler is a set of Ignite Event-Handlers, must have `attach` function, like: | |
| CheckpointHandler, StatsHandler, etc. | |
| amp: whether to enable auto-mixed-precision training, default is False. | |
| event_names: additional custom ignite events that will register to the engine. | |
| new events can be a list of str or `ignite.engine.events.EventEnum`. | |
| event_to_attr: a dictionary to map an event to a state attribute, then add to `engine.state`. | |
| for more details, check: https://pytorch.org/ignite/generated/ignite.engine.engine.Engine.html | |
| #ignite.engine.engine.Engine.register_events. | |
| decollate: whether to decollate the batch-first data to a list of data after model computation, | |
| recommend `decollate=True` when `postprocessing` uses components from `monai.transforms`. | |
| default to `True`. | |
| optim_set_to_none: when calling `optimizer.zero_grad()`, instead of setting to zero, set the grads to None. | |
| more details: https://pytorch.org/docs/stable/generated/torch.optim.Optimizer.zero_grad.html. | |
| to_kwargs: dict of other args for `prepare_batch` API when converting the input data, except for | |
| `device`, `non_blocking`. | |
| amp_kwargs: dict of the args for `torch.cuda.amp.autocast()` API, for more details: | |
| https://pytorch.org/docs/stable/amp.html#torch.cuda.amp.autocast. | |
| """ | |
| def __init__( | |
| self, | |
| device: str | torch.device, | |
| max_epochs: int, | |
| train_data_loader: Iterable | DataLoader, | |
| network: torch.nn.Module, | |
| autoencoder_model: torch.nn.Module, | |
| optimizer: Optimizer, | |
| loss_function: Callable, | |
| latent_shape: Sequence, | |
| inferer: Inferer, | |
| epoch_length: int | None = None, | |
| non_blocking: bool = False, | |
| prepare_batch: Callable = default_prepare_batch, | |
| iteration_update: Callable[[Engine, Any], Any] | None = None, | |
| postprocessing: Transform | None = None, | |
| key_train_metric: dict[str, Metric] | None = None, | |
| additional_metrics: dict[str, Metric] | None = None, | |
| metric_cmp_fn: Callable = default_metric_cmp_fn, | |
| train_handlers: Sequence | None = None, | |
| amp: bool = False, | |
| event_names: list[str | EventEnum | type[EventEnum]] | None = None, | |
| event_to_attr: dict | None = None, | |
| decollate: bool = True, | |
| optim_set_to_none: bool = False, | |
| to_kwargs: dict | None = None, | |
| amp_kwargs: dict | None = None, | |
| ) -> None: | |
| super().__init__( | |
| device=device, | |
| max_epochs=max_epochs, | |
| train_data_loader=train_data_loader, | |
| network=network, | |
| optimizer=optimizer, | |
| loss_function=loss_function, | |
| inferer=inferer, | |
| optim_set_to_none=optim_set_to_none, | |
| epoch_length=epoch_length, | |
| non_blocking=non_blocking, | |
| prepare_batch=prepare_batch, | |
| iteration_update=iteration_update, | |
| postprocessing=postprocessing, | |
| key_train_metric=key_train_metric, | |
| additional_metrics=additional_metrics, | |
| metric_cmp_fn=metric_cmp_fn, | |
| train_handlers=train_handlers, | |
| amp=amp, | |
| event_names=event_names, | |
| event_to_attr=event_to_attr, | |
| decollate=decollate, | |
| to_kwargs=to_kwargs, | |
| amp_kwargs=amp_kwargs, | |
| ) | |
| self.latent_shape = latent_shape | |
| self.autoencoder_model = autoencoder_model | |
| def _iteration(self, engine: LDMTrainer, batchdata: dict[str, torch.Tensor]) -> dict: | |
| """ | |
| Callback function for the Supervised Training processing logic of 1 iteration in Ignite Engine. | |
| Return below items in a dictionary: | |
| - IMAGE: image Tensor data for model input, already moved to device. | |
| - LABEL: label Tensor data corresponding to the image, already moved to device. | |
| - PRED: prediction result of model. | |
| - LOSS: loss value computed by loss function. | |
| Args: | |
| engine: `SupervisedTrainer` to execute operation for an iteration. | |
| batchdata: input data for this iteration, usually can be dictionary or tuple of Tensor data. | |
| Raises: | |
| ValueError: When ``batchdata`` is None. | |
| """ | |
| if batchdata is None: | |
| raise ValueError("Must provide batch data for current iteration.") | |
| batch = engine.prepare_batch(batchdata, engine.state.device, engine.non_blocking, **engine.to_kwargs) | |
| if len(batch) == 2: | |
| images, labels = batch | |
| args: tuple = () | |
| kwargs: dict = {} | |
| else: | |
| images, labels, args, kwargs = batch | |
| # put iteration outputs into engine.state | |
| engine.state.output = {CommonKeys.IMAGE: images} | |
| # generate noise | |
| noise_shape = [images.shape[0]] + list(self.latent_shape) | |
| noise = torch.randn(noise_shape, dtype=images.dtype).to(images.device) | |
| engine.state.output = {"noise": noise} | |
| # Create timesteps | |
| timesteps = torch.randint( | |
| 0, engine.inferer.scheduler.num_train_timesteps, (images.shape[0],), device=images.device | |
| ).long() | |
| def _compute_pred_loss(): | |
| # predicted noise | |
| engine.state.output[CommonKeys.PRED] = engine.inferer( | |
| inputs=images, | |
| autoencoder_model=self.autoencoder_model, | |
| diffusion_model=engine.network, | |
| noise=noise, | |
| timesteps=timesteps, | |
| ) | |
| engine.fire_event(IterationEvents.FORWARD_COMPLETED) | |
| # compute loss | |
| engine.state.output[CommonKeys.LOSS] = engine.loss_function( | |
| engine.state.output[CommonKeys.PRED], noise | |
| ).mean() | |
| engine.fire_event(IterationEvents.LOSS_COMPLETED) | |
| engine.network.train() | |
| engine.optimizer.zero_grad(set_to_none=engine.optim_set_to_none) | |
| if engine.amp and engine.scaler is not None: | |
| with torch.cuda.amp.autocast(**engine.amp_kwargs): | |
| _compute_pred_loss() | |
| engine.scaler.scale(engine.state.output[CommonKeys.LOSS]).backward() | |
| engine.fire_event(IterationEvents.BACKWARD_COMPLETED) | |
| engine.scaler.step(engine.optimizer) | |
| engine.scaler.update() | |
| else: | |
| _compute_pred_loss() | |
| engine.state.output[CommonKeys.LOSS].backward() | |
| engine.fire_event(IterationEvents.BACKWARD_COMPLETED) | |
| engine.optimizer.step() | |
| engine.fire_event(IterationEvents.MODEL_COMPLETED) | |
| return engine.state.output | |
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