Buckets:
| { | |
| "schema_version": "1.1", | |
| "note": "L1 只放结构键与覆盖计数，不含活动数据；join 合法性按语义判定，不按列名", | |
| "keys": [ | |
| { | |
| "key": "source", | |
| "kind": "categorical", | |
| "members": [ | |
| "counts_v4", | |
| "flywire", | |
| "omnibrain_multi", | |
| "steinmetz" | |
| ], | |
| "n_distinct_union": 5, | |
| "n_distinct_by_member": { | |
| "counts_v4": 2, | |
| "flywire": 1, | |
| "omnibrain_multi": 4, | |
| "steinmetz": 1 | |
| }, | |
| "vocabulary_relation": "shared", | |
| "values_by_member": { | |
| "counts_v4": [ | |
| "human_intracortical", | |
| "macaque_nlb" | |
| ], | |
| "flywire": [ | |
| "flywire" | |
| ], | |
| "omnibrain_multi": [ | |
| "human_eeg", | |
| "human_intracortical", | |
| "macaque_nlb", | |
| "mouse_steinmetz" | |
| ], | |
| "steinmetz": [ | |
| "mouse_steinmetz" | |
| ] | |
| }, | |
| "joinable_across_members": true, | |
| "semantics": "数据来源（数据集/片段集合）", | |
| "caveat": "同名 source 在 counts_v4 与 steinmetz 中是同一批记录的不同编码" | |
| }, | |
| { | |
| "key": "species", | |
| "kind": "categorical", | |
| "members": [ | |
| "counts_v4", | |
| "flywire", | |
| "omnibrain_multi", | |
| "steinmetz" | |
| ], | |
| "n_distinct_union": 4, | |
| "n_distinct_by_member": { | |
| "counts_v4": 2, | |
| "flywire": 1, | |
| "omnibrain_multi": 3, | |
| "steinmetz": 1 | |
| }, | |
| "vocabulary_relation": "shared", | |
| "values_by_member": { | |
| "counts_v4": [ | |
| "homo_sapiens", | |
| "macaca_mulatta" | |
| ], | |
| "flywire": [ | |
| "drosophila_melanogaster" | |
| ], | |
| "omnibrain_multi": [ | |
| "homo_sapiens", | |
| "macaca_mulatta", | |
| "mus_musculus" | |
| ], | |
| "steinmetz": [ | |
| "mus_musculus" | |
| ] | |
| }, | |
| "joinable_across_members": true, | |
| "semantics": "物种", | |
| "caveat": "只有 3 个值；EEG 与侵入式共用 homo_sapiens" | |
| }, | |
| { | |
| "key": "modality", | |
| "kind": "categorical", | |
| "members": [ | |
| "counts_v4", | |
| "flywire", | |
| "omnibrain_multi", | |
| "steinmetz" | |
| ], | |
| "n_distinct_union": 3, | |
| "n_distinct_by_member": { | |
| "counts_v4": 1, | |
| "flywire": 1, | |
| "omnibrain_multi": 2, | |
| "steinmetz": 1 | |
| }, | |
| "vocabulary_relation": "shared", | |
| "values_by_member": { | |
| "counts_v4": [ | |
| "extracellular_spike" | |
| ], | |
| "flywire": [ | |
| "connectome" | |
| ], | |
| "omnibrain_multi": [ | |
| "extracellular_spike", | |
| "scalp_eeg" | |
| ], | |
| "steinmetz": [ | |
| "extracellular_spike" | |
| ] | |
| }, | |
| "joinable_across_members": true, | |
| "semantics": "记录模态", | |
| "caveat": "scalp_eeg 与 intracortical 在 L2 的可用不变量不同" | |
| }, | |
| { | |
| "key": "region", | |
| "kind": "anatomical_node", | |
| "members": [ | |
| "counts_v4", | |
| "flywire", | |
| "omnibrain_multi", | |
| "steinmetz" | |
| ], | |
| "n_distinct_union": 103, | |
| "n_distinct_by_member": { | |
| "counts_v4": 3, | |
| "flywire": 24, | |
| "omnibrain_multi": 33, | |
| "steinmetz": 73 | |
| }, | |
| "vocabulary_relation": "multi_vocabulary", | |
| "values_by_member": { | |
| "counts_v4": [ | |
| "M1", | |
| "PFC", | |
| "S1" | |
| ], | |
| "flywire": [ | |
| "ALLN", | |
| "ALPN", | |
| "AN", | |
| "CX", | |
| "DAN", | |
| "Kenyon_Cell", | |
| "LA", | |
| "LHCENT", | |
| "LHLN", | |
| "LO", | |
| "LOP", | |
| "MBON", | |
| "ME", | |
| "TuBu", | |
| "bilateral", | |
| "gustatory", | |
| "hygrosensory", | |
| "mAL", | |
| "mechanosensory", | |
| "ocellar", | |
| "olfactory", | |
| "pars_intercerebralis", | |
| "unknown_sensory", | |
| "visual" | |
| ], | |
| "omnibrain_multi": [ | |
| "ACB", | |
| "APN", | |
| "AUD", | |
| "Area2", | |
| "BLA", | |
| "CA", | |
| "COA", | |
| "CP", | |
| "DMFC", | |
| "GPe", | |
| "LP", | |
| "LS", | |
| "LSr", | |
| "M1", | |
| "M1_PMd", | |
| "MB", | |
| "MD", | |
| "MG", | |
| "MOp", | |
| "MRN", | |
| "OLF", | |
| "ORB", | |
| "ORBm", | |
| "PL", | |
| "PO" | |
| ], | |
| "steinmetz": [ | |
| "ACA", | |
| "ACB", | |
| "APN", | |
| "AUD", | |
| "BLA", | |
| "BMA", | |
| "CA", | |
| "CA1", | |
| "CA2", | |
| "CA3", | |
| "CL", | |
| "COA", | |
| "CP", | |
| "DG", | |
| "DP", | |
| "EP", | |
| "EPd", | |
| "GPe", | |
| "IC", | |
| "ILA", | |
| "LD", | |
| "LGd", | |
| "LH", | |
| "LP", | |
| "LS" | |
| ] | |
| }, | |
| "joinable_across_members": "partial", | |
| "semantics": "解剖区（偏序节点，不是层级）", | |
| "caveat": "三套词表（Allen / Brodmann / FlyWire super_class）不能直接相等；且同一列混了五种证据强度，跨成员比较必须先用 region_confidence 过滤", | |
| "region_confidence_by_level": { | |
| "node": { | |
| "anatomical": 0, | |
| "anatomical_unmapped": 0, | |
| "coarse": 107265, | |
| "compound": 0, | |
| "inferred": 0, | |
| "none": 0 | |
| }, | |
| "segment": { | |
| "anatomical": 2, | |
| "anatomical_unmapped": 0, | |
| "coarse": 3, | |
| "compound": 67, | |
| "inferred": 103, | |
| "none": 0 | |
| }, | |
| "unit": { | |
| "anatomical": 24029, | |
| "anatomical_unmapped": 0, | |
| "coarse": 0, | |
| "compound": 0, | |
| "inferred": 0, | |
| "none": 0 | |
| }, | |
| "window": { | |
| "anatomical": 273989, | |
| "anatomical_unmapped": 23823, | |
| "coarse": 35539, | |
| "compound": 168048, | |
| "inferred": 86851, | |
| "none": 821600 | |
| } | |
| }, | |
| "region_confidence_by_member": { | |
| "counts_v4": { | |
| "anatomical": 2, | |
| "anatomical_unmapped": 0, | |
| "coarse": 3, | |
| "compound": 67, | |
| "inferred": 103, | |
| "none": 0 | |
| }, | |
| "flywire": { | |
| "anatomical": 0, | |
| "anatomical_unmapped": 0, | |
| "coarse": 107265, | |
| "compound": 0, | |
| "inferred": 0, | |
| "none": 0 | |
| }, | |
| "omnibrain_multi": { | |
| "anatomical": 273989, | |
| "anatomical_unmapped": 23823, | |
| "coarse": 35539, | |
| "compound": 168048, | |
| "inferred": 86851, | |
| "none": 821600 | |
| }, | |
| "steinmetz": { | |
| "anatomical": 24029, | |
| "anatomical_unmapped": 0, | |
| "coarse": 0, | |
| "compound": 0, | |
| "inferred": 0, | |
| "none": 0 | |
| } | |
| }, | |
| "mapping_status_raw": { | |
| "unassigned": 821600, | |
| "exact_single_species": 257790, | |
| "compound": 168048, | |
| "task_code_reinterpreted": 86851, | |
| "uberon_missing": 23823, | |
| "coarse": 19019, | |
| "rollup": 16520, | |
| "exact": 16199 | |
| }, | |
| "region_assignment": { | |
| "note": "标签的归属粒度；与 region_confidence（映射质量）是两个维度", | |
| "counts": { | |
| "per_node": 107265, | |
| "per_segment": 175, | |
| "per_unit": 24029, | |
| "session_majority": 314332, | |
| "window_area": 1095518 | |
| }, | |
| "session_majority_accuracy": 0.271, | |
| "session_majority_evidence": "39 个 session 的主导区占比中位 26.6%；单元加权正确率 27.1%（其余 72.9% 的单元被归到错误区）；仅 9/39 个 session 的占比 ≥30%，0/39 ≥70%" | |
| }, | |
| "recommended_filter": "跨物种/跨成员比较只用 region_confidence == 'anatomical'；'inferred' 与 'compound' 必须在图注中单列；region_assignment == 'session_majority' 的数据不可用于区级分析" | |
| }, | |
| { | |
| "key": "domain_l1", | |
| "kind": "functional_node", | |
| "members": [ | |
| "counts_v4", | |
| "omnibrain_multi", | |
| "steinmetz" | |
| ], | |
| "n_distinct_union": 17, | |
| "n_distinct_by_member": { | |
| "counts_v4": 3, | |
| "omnibrain_multi": 6, | |
| "steinmetz": 13 | |
| }, | |
| "vocabulary_relation": "multi_vocabulary", | |
| "values_by_member": { | |
| "counts_v4": [ | |
| "association", | |
| "motor", | |
| "sensory" | |
| ], | |
| "omnibrain_multi": [ | |
| "association", | |
| "memory", | |
| "motor", | |
| "other", | |
| "sensory", | |
| "subcortical" | |
| ], | |
| "steinmetz": [ | |
| "auditory", | |
| "brainstem", | |
| "hippocampus", | |
| "hypothalamus", | |
| "midbrain", | |
| "motor", | |
| "other", | |
| "prefrontal", | |
| "septal", | |
| "somatosensory", | |
| "striatum", | |
| "thalamus", | |
| "visual" | |
| ] | |
| }, | |
| "joinable_across_members": "partial", | |
| "semantics": "功能域（multi 是 6 类 L1；小鼠 units 表是 13 个 functional_domain）", | |
| "caveat": "两套词表：13 个 functional_domain 未与 6 个 L1 域对齐；与 region 也不可交换" | |
| }, | |
| { | |
| "key": "unit", | |
| "kind": "instance", | |
| "members": [ | |
| "steinmetz", | |
| "primate_macaque_nlb", | |
| "primate_dmfc_rsg", | |
| "counts_v4_ragged" | |
| ], | |
| "joinable_across_members": false, | |
| "semantics": "单个神经元/通道", | |
| "caveat": "跨成员的 unit 列不是同一个神经元；禁止拼接或按列对齐" | |
| }, | |
| { | |
| "key": "window", | |
| "kind": "sampling", | |
| "members": [ | |
| "omnibrain_multi", | |
| "omnibrain_spike_view" | |
| ], | |
| "joinable_across_members": false, | |
| "semantics": "100 ms × 8 bin 的滑动窗", | |
| "caveat": "窗是派生采样单位，不同成员的 stride/长度不同，不能当样本键" | |
| }, | |
| { | |
| "key": "trial", | |
| "kind": "instance", | |
| "members": [ | |
| "primate_human_eeg", | |
| "omnibrain4d_eeg_test" | |
| ], | |
| "joinable_across_members": false, | |
| "semantics": "试次", | |
| "caveat": "不同数据集试次编号无共同含义" | |
| } | |
| ], | |
| "holes": { | |
| "axes": [ | |
| "source", | |
| "region", | |
| "domain_l1" | |
| ], | |
| "observed": 140, | |
| "theoretical": 594, | |
| "empty_fraction": 0.764, | |
| "n_per_axis": { | |
| "source": 3, | |
| "region": 33, | |
| "domain_l1": 6 | |
| }, | |
| "source": "omnibrain-multi/index_timeseries.parquet" | |
| }, | |
| "levels": { | |
| "node": 1, | |
| "segment": 1, | |
| "unit": 1, | |
| "window": 1 | |
| }, | |
| "members": { | |
| "steinmetz": { | |
| "rows_in": 24029, | |
| "groups": 73, | |
| "confidence": { | |
| "anatomical": 24029 | |
| } | |
| }, | |
| "counts_v4": { | |
| "rows_in": 175, | |
| "groups": 4, | |
| "confidence": { | |
| "inferred": 103, | |
| "compound": 67, | |
| "coarse": 3, | |
| "anatomical": 2 | |
| } | |
| }, | |
| "omnibrain_multi": { | |
| "rows_in": 1409850, | |
| "groups": 143, | |
| "confidence": { | |
| "none": 821600, | |
| "anatomical": 273989, | |
| "compound": 168048, | |
| "inferred": 86851, | |
| "coarse": 35539, | |
| "anatomical_unmapped": 23823 | |
| } | |
| }, | |
| "flywire": { | |
| "rows_in": 107265, | |
| "groups": 24, | |
| "confidence": { | |
| "coarse": 107265 | |
| } | |
| } | |
| } | |
| } |
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- Size:
- 11.3 kB
- Xet hash:
- e25046e71bd138b39ce9335c2cb0d42037f5fd9315f941be031b9f6c02d54355
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