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Geneformer

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Geneformer / setup.py

Commit History

  1. update with V2 models

    Christina Theodoris
    d319fef

  1. Add find_packages to automatically include mtl and subpackages in setup.py (#410)⁠

    ctheodoris +1: madhavanvenkatesh
    Verified signature
    3b78204

  2. adding tensorboard to setup.py (#409)⁠

    ctheodoris +1: madhavanvenkatesh
    Verified signature
    94d98d1

  1. update setup with req and manifest with updated filenames

    ctheodoris
    a34fbc2

  1. update dependencies, reinstate compatibility with python<3.9 with typing for List

    Christina Theodoris
    10d3f10

  1. Add functions for extracting gene embeddings, move state_embs_dict outside isp, fix bugs in isp

    Christina Theodoris
    2f25aea

  1. Add option to output embs as tensor

    Christina Theodoris
    624349c

  1. Add setup.py

    ctheodoris
    b73028f